View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17365_low_2 (Length: 398)

Name: NF17365_low_2
Description: NF17365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17365_low_2
NF17365_low_2
[»] chr3 (59 HSPs)
chr3 (10-395)||(16743991-16744377)
chr3 (21-345)||(13838905-13839232)
chr3 (10-345)||(14842487-14842824)
chr3 (10-271)||(17912483-17912744)
chr3 (10-345)||(2049810-2050147)
chr3 (10-345)||(12030073-12030410)
chr3 (10-308)||(15858986-15859287)
chr3 (209-393)||(19231982-19232169)
chr3 (106-271)||(2449238-2449404)
chr3 (9-281)||(51158008-51158282)
chr3 (10-264)||(15936634-15936890)
chr3 (225-345)||(19260749-19260869)
chr3 (13-264)||(15938476-15938729)
chr3 (139-271)||(13975722-13975853)
chr3 (139-271)||(45860937-45861068)
chr3 (139-271)||(13954890-13955021)
chr3 (310-388)||(15857120-15857198)
chr3 (313-393)||(3992873-3992953)
chr3 (313-393)||(55513193-55513273)
chr3 (313-393)||(2844514-2844594)
chr3 (14-346)||(15614838-15615170)
chr3 (313-393)||(54037976-54038056)
chr3 (313-393)||(17955832-17955916)
chr3 (313-393)||(7854305-7854385)
chr3 (139-259)||(55316351-55316471)
chr3 (10-237)||(16821139-16821369)
chr3 (313-374)||(45581954-45582016)
chr3 (10-119)||(47984650-47984759)
chr3 (10-119)||(48003224-48003333)
chr3 (139-259)||(41270207-41270327)
chr3 (10-119)||(47993937-47994046)
chr3 (10-119)||(48012510-48012619)
chr3 (214-255)||(14080715-14080756)
chr3 (329-386)||(17205019-17205076)
chr3 (313-386)||(38810868-38810941)
chr3 (331-386)||(12031849-12031904)
chr3 (192-345)||(54651642-54651796)
chr3 (313-386)||(13301323-13301396)
chr3 (313-386)||(13311979-13312052)
chr3 (329-386)||(17191879-17191936)
chr3 (313-345)||(2449152-2449184)
chr3 (313-345)||(16261777-16261809)
chr3 (313-345)||(16933869-16933901)
chr3 (313-345)||(17912398-17912430)
chr3 (313-345)||(23492696-23492728)
chr3 (313-345)||(38168237-38168269)
chr3 (313-345)||(53771365-53771397)
chr3 (329-386)||(3576290-3576347)
chr3 (10-127)||(12264932-12265049)
chr3 (314-379)||(15550922-15550987)
chr3 (313-345)||(11986080-11986112)
chr3 (192-264)||(11986173-11986245)
chr3 (313-345)||(13954804-13954836)
chr3 (313-345)||(14285289-14285321)
chr3 (313-345)||(19947026-19947058)
chr3 (313-345)||(30153265-30153297)
chr3 (313-345)||(33342204-33342236)
chr3 (313-345)||(45861122-45861154)
chr3 (313-345)||(51961031-51961063)
[»] chr8 (36 HSPs)
chr8 (10-271)||(22907214-22907476)
chr8 (9-345)||(16193643-16193980)
chr8 (10-393)||(16404852-16405235)
chr8 (21-345)||(24928716-24929043)
chr8 (10-345)||(43373392-43373731)
chr8 (106-271)||(5238184-5238350)
chr8 (106-271)||(24661248-24661414)
chr8 (106-271)||(43685643-43685809)
chr8 (21-271)||(17345581-17345832)
chr8 (14-259)||(6774258-6774505)
chr8 (14-259)||(24548986-24549233)
chr8 (313-393)||(274766-274846)
chr8 (313-393)||(641003-641083)
chr8 (313-393)||(826809-826889)
chr8 (313-393)||(24716714-24716794)
chr8 (139-255)||(21844576-21844692)
chr8 (139-255)||(21851969-21852085)
chr8 (139-259)||(30120854-30120974)
chr8 (313-393)||(39115598-39115678)
chr8 (139-259)||(16674392-16674512)
chr8 (27-121)||(23837214-23837308)
chr8 (329-386)||(17285543-17285600)
chr8 (329-386)||(21198005-21198062)
chr8 (313-345)||(5238404-5238436)
chr8 (313-345)||(22907128-22907160)
chr8 (313-345)||(24385652-24385684)
chr8 (313-345)||(24661162-24661194)
chr8 (313-345)||(43685863-43685895)
chr8 (10-196)||(222754-222943)
chr8 (10-196)||(736377-736566)
chr8 (10-196)||(860272-860461)
chr8 (214-255)||(23149985-23150026)
chr8 (214-255)||(23226076-23226117)
chr8 (313-345)||(2545265-2545297)
chr8 (313-345)||(3431176-3431208)
chr8 (313-345)||(22886654-22886686)
[»] chr4 (34 HSPs)
chr4 (10-271)||(26680201-26680463)
chr4 (10-393)||(54118120-54118507)
chr4 (10-345)||(13246430-13246769)
chr4 (10-345)||(15675009-15675352)
chr4 (139-345)||(122020-122226)
chr4 (106-271)||(10488659-10488825)
chr4 (106-271)||(16327926-16328092)
chr4 (74-345)||(10104170-10104449)
chr4 (10-244)||(31115629-31115865)
chr4 (209-345)||(33240901-33241043)
chr4 (139-271)||(13048221-13048353)
chr4 (313-393)||(25119059-25119139)
chr4 (10-255)||(10644219-10644467)
chr4 (313-393)||(5682380-5682460)
chr4 (239-345)||(31132545-31132657)
chr4 (10-108)||(111395-111493)
chr4 (10-259)||(47357654-47357906)
chr4 (74-255)||(40885570-40885753)
chr4 (313-386)||(41165808-41165881)
chr4 (27-121)||(41166083-41166177)
chr4 (10-55)||(10104449-10104494)
chr4 (329-386)||(47534933-47534990)
chr4 (313-345)||(14952085-14952117)
chr4 (313-345)||(15135907-15135939)
chr4 (313-345)||(15272211-15272243)
chr4 (313-345)||(16327840-16327872)
chr4 (313-345)||(16609013-16609045)
chr4 (313-345)||(26680517-26680549)
chr4 (34-121)||(15044851-15044938)
chr4 (9-121)||(52265645-52265758)
chr4 (313-345)||(8045272-8045304)
chr4 (214-254)||(13809511-13809551)
chr4 (57-121)||(13809647-13809711)
chr4 (313-345)||(16523146-16523178)
[»] chr1 (23 HSPs)
chr1 (10-395)||(41394222-41394609)
chr1 (10-345)||(20931345-20931682)
chr1 (10-345)||(20445679-20446019)
chr1 (10-345)||(20893551-20893889)
chr1 (10-345)||(20913037-20913367)
chr1 (10-345)||(37844374-37844714)
chr1 (10-345)||(20531444-20531783)
chr1 (106-271)||(51452589-51452755)
chr1 (10-344)||(22227809-22228146)
chr1 (10-344)||(22232506-22232843)
chr1 (14-259)||(2116258-2116506)
chr1 (313-393)||(21860334-21860414)
chr1 (313-387)||(44034829-44034903)
chr1 (139-346)||(45051554-45051759)
chr1 (279-386)||(27675086-27675191)
chr1 (313-393)||(41218728-41218808)
chr1 (139-259)||(5072388-5072508)
chr1 (139-259)||(18601118-18601238)
chr1 (329-386)||(13376711-13376768)
chr1 (329-386)||(20177513-20177570)
chr1 (313-344)||(15861327-15861358)
chr1 (214-255)||(22143361-22143402)
chr1 (313-345)||(51452809-51452841)
[»] scaffold0078 (3 HSPs)
scaffold0078 (10-271)||(37066-37328)
scaffold0078 (313-393)||(41632-41712)
scaffold0078 (313-345)||(36980-37012)
[»] chr7 (44 HSPs)
chr7 (10-271)||(7293017-7293279)
chr7 (10-386)||(3059966-3060344)
chr7 (12-345)||(16211768-16212103)
chr7 (15-345)||(11580661-11580997)
chr7 (10-345)||(13036938-13037277)
chr7 (10-345)||(36052667-36053003)
chr7 (106-271)||(11516324-11516490)
chr7 (106-271)||(15441564-15441730)
chr7 (106-271)||(30262129-30262295)
chr7 (10-271)||(47481031-47481294)
chr7 (10-264)||(18253842-18254098)
chr7 (10-270)||(13321014-13321278)
chr7 (10-253)||(16478968-16479213)
chr7 (139-271)||(25292338-25292470)
chr7 (313-393)||(32493898-32493978)
chr7 (313-393)||(126738-126818)
chr7 (139-255)||(13572808-13572924)
chr7 (313-393)||(1936869-1936949)
chr7 (143-343)||(295893-296094)
chr7 (313-393)||(111121-111201)
chr7 (139-259)||(10989541-10989661)
chr7 (140-260)||(2437590-2437710)
chr7 (279-386)||(13377819-13377924)
chr7 (147-259)||(13911024-13911136)
chr7 (314-393)||(7283908-7283987)
chr7 (229-271)||(14113989-14114031)
chr7 (229-271)||(14423639-14423681)
chr7 (329-386)||(13389693-13389750)
chr7 (239-345)||(36024372-36024485)
chr7 (313-345)||(2029244-2029276)
chr7 (313-345)||(7293333-7293365)
chr7 (313-345)||(11516544-11516576)
chr7 (313-345)||(14113903-14113935)
chr7 (313-345)||(15441478-15441510)
chr7 (276-345)||(15709428-15709501)
chr7 (330-386)||(16919870-16919926)
chr7 (313-345)||(30262043-30262075)
chr7 (313-345)||(42056188-42056220)
chr7 (313-345)||(371417-371449)
chr7 (313-345)||(3049905-3049937)
chr7 (313-345)||(13321334-13321366)
chr7 (313-341)||(15516765-15516793)
chr7 (313-345)||(25124450-25124482)
chr7 (313-345)||(47480944-47480976)
[»] chr2 (36 HSPs)
chr2 (10-393)||(19794581-19794967)
chr2 (10-345)||(36982364-36982704)
chr2 (10-393)||(43642833-43643220)
chr2 (10-393)||(20627190-20627576)
chr2 (15-345)||(462743-463075)
chr2 (10-345)||(8891242-8891581)
chr2 (10-345)||(24341309-24341652)
chr2 (106-271)||(19689401-19689567)
chr2 (106-271)||(23820168-23820334)
chr2 (106-271)||(14906440-14906606)
chr2 (106-271)||(20015108-20015274)
chr2 (10-271)||(25265390-25265653)
chr2 (139-271)||(17396653-17396784)
chr2 (249-345)||(22863169-22863267)
chr2 (10-221)||(7507894-7508107)
chr2 (313-393)||(22275045-22275125)
chr2 (313-393)||(22284278-22284358)
chr2 (314-393)||(15633538-15633617)
chr2 (10-259)||(19886661-19886913)
chr2 (329-386)||(43646232-43646289)
chr2 (313-346)||(19689314-19689347)
chr2 (313-345)||(9652796-9652828)
chr2 (313-345)||(14906354-14906386)
chr2 (334-386)||(19660221-19660273)
chr2 (313-345)||(23820388-23820420)
chr2 (313-344)||(25213372-25213403)
chr2 (313-386)||(19666848-19666921)
chr2 (329-386)||(25305769-25305826)
chr2 (279-386)||(31146032-31146138)
chr2 (313-345)||(7507757-7507789)
chr2 (27-87)||(9636761-9636821)
chr2 (313-345)||(17396567-17396599)
chr2 (313-345)||(20015328-20015360)
chr2 (43-87)||(24884718-24884762)
chr2 (313-345)||(28031134-28031166)
chr2 (313-345)||(33128372-33128404)
[»] scaffold0023 (3 HSPs)
scaffold0023 (10-345)||(48598-48935)
scaffold0023 (139-237)||(36225-36323)
scaffold0023 (313-345)||(61122-61154)
[»] scaffold0266 (2 HSPs)
scaffold0266 (10-345)||(1124-1462)
scaffold0266 (12-345)||(3508-3843)
[»] scaffold0195 (2 HSPs)
scaffold0195 (10-342)||(19206-19543)
scaffold0195 (10-271)||(21290-21553)
[»] scaffold0001 (2 HSPs)
scaffold0001 (21-345)||(171916-172242)
scaffold0001 (21-345)||(177619-177945)
[»] scaffold0077 (2 HSPs)
scaffold0077 (10-346)||(36836-37176)
scaffold0077 (314-393)||(15319-15398)
[»] chr5 (36 HSPs)
chr5 (10-345)||(23506965-23507302)
chr5 (10-345)||(27182471-27182810)
chr5 (10-345)||(18530988-18531330)
chr5 (10-345)||(22053753-22054096)
chr5 (106-271)||(20623066-20623232)
chr5 (106-271)||(21233528-21233694)
chr5 (109-271)||(37052844-37053007)
chr5 (106-271)||(16536294-16536460)
chr5 (106-269)||(25900408-25900571)
chr5 (21-271)||(34939289-34939540)
chr5 (139-259)||(29188284-29188404)
chr5 (141-255)||(27009975-27010089)
chr5 (10-259)||(4199985-4200237)
chr5 (10-259)||(22366481-22366733)
chr5 (10-259)||(25426628-25426880)
chr5 (10-256)||(18777995-18778244)
chr5 (10-259)||(12374-12626)
chr5 (139-256)||(43443398-43443515)
chr5 (139-259)||(19500031-19500151)
chr5 (314-388)||(11584374-11584448)
chr5 (10-259)||(21073595-21073847)
chr5 (313-386)||(5450695-5450768)
chr5 (329-386)||(21222462-21222519)
chr5 (313-345)||(16105967-16105999)
chr5 (313-345)||(20623286-20623318)
chr5 (313-345)||(21233442-21233474)
chr5 (10-121)||(23493917-23494029)
chr5 (313-345)||(25900320-25900352)
chr5 (313-345)||(37053061-37053093)
chr5 (214-255)||(21310709-21310750)
chr5 (214-255)||(23981516-23981557)
chr5 (313-345)||(108728-108760)
chr5 (57-121)||(7728466-7728530)
chr5 (313-345)||(9730278-9730310)
chr5 (313-345)||(16536514-16536546)
chr5 (192-264)||(32950879-32950951)
[»] scaffold0106 (1 HSPs)
scaffold0106 (14-345)||(41733-42066)
[»] scaffold0175 (1 HSPs)
scaffold0175 (10-345)||(882-1218)
[»] chr6 (36 HSPs)
chr6 (21-345)||(23153458-23153786)
chr6 (14-344)||(14626045-14626377)
chr6 (10-271)||(35009439-35009702)
chr6 (21-271)||(1657748-1657999)
chr6 (21-271)||(15862484-15862734)
chr6 (14-346)||(1650020-1650352)
chr6 (276-345)||(23148266-23148335)
chr6 (313-393)||(19983144-19983224)
chr6 (313-393)||(35015009-35015089)
chr6 (10-259)||(25175563-25175815)
chr6 (313-393)||(18583640-18583720)
chr6 (10-113)||(27740838-27740941)
chr6 (188-271)||(27751605-27751688)
chr6 (10-259)||(27653983-27654235)
chr6 (329-386)||(21623506-21623563)
chr6 (139-259)||(16825752-16825874)
chr6 (74-271)||(29665937-29666137)
chr6 (27-120)||(18381821-18381914)
chr6 (329-386)||(22361619-22361676)
chr6 (314-386)||(14152632-14152704)
chr6 (313-345)||(18002395-18002427)
chr6 (313-345)||(23995247-23995279)
chr6 (313-345)||(26090059-26090091)
chr6 (313-344)||(4991396-4991427)
chr6 (315-345)||(15742120-15742150)
chr6 (214-255)||(16887792-16887833)
chr6 (214-255)||(33324898-33324939)
chr6 (214-255)||(35136013-35136054)
chr6 (313-345)||(1657661-1657693)
chr6 (313-345)||(15862789-15862821)
chr6 (313-345)||(18823283-18823315)
chr6 (313-345)||(18839138-18839170)
chr6 (10-97)||(22361926-22362014)
chr6 (57-121)||(25367374-25367438)
chr6 (313-345)||(27751742-27751774)
chr6 (313-345)||(32276659-32276691)
[»] scaffold0009 (1 HSPs)
scaffold0009 (16-345)||(272031-272362)
[»] scaffold0012 (2 HSPs)
scaffold0012 (21-345)||(247366-247694)
scaffold0012 (313-345)||(34075-34107)
[»] scaffold0008 (2 HSPs)
scaffold0008 (10-345)||(128095-128431)
scaffold0008 (147-237)||(31697-31787)
[»] scaffold0413 (1 HSPs)
scaffold0413 (10-345)||(5990-6326)
[»] scaffold0302 (1 HSPs)
scaffold0302 (10-345)||(12115-12450)
[»] scaffold0162 (3 HSPs)
scaffold0162 (10-345)||(26340-26678)
scaffold0162 (10-271)||(8180-8440)
scaffold0162 (329-386)||(6877-6934)
[»] scaffold0018 (1 HSPs)
scaffold0018 (139-343)||(51110-51314)
[»] scaffold0498 (1 HSPs)
scaffold0498 (10-345)||(8878-9215)
[»] scaffold0218 (1 HSPs)
scaffold0218 (10-335)||(4996-5324)
[»] scaffold0011 (1 HSPs)
scaffold0011 (10-345)||(123087-123427)
[»] scaffold0025 (3 HSPs)
scaffold0025 (10-345)||(8849-9192)
scaffold0025 (10-297)||(148721-149012)
scaffold0025 (245-345)||(146838-146938)
[»] scaffold0141 (4 HSPs)
scaffold0141 (106-271)||(26892-27058)
scaffold0141 (106-264)||(22637-22796)
scaffold0141 (313-345)||(22857-22889)
scaffold0141 (313-345)||(27112-27144)
[»] scaffold0124 (2 HSPs)
scaffold0124 (106-271)||(1582-1748)
scaffold0124 (313-345)||(1496-1528)
[»] scaffold0028 (4 HSPs)
scaffold0028 (139-345)||(89378-89586)
scaffold0028 (220-345)||(107708-107835)
scaffold0028 (313-344)||(130880-130911)
scaffold0028 (214-255)||(79745-79786)
[»] scaffold0049 (2 HSPs)
scaffold0049 (10-264)||(48187-48443)
scaffold0049 (314-393)||(20493-20572)
[»] scaffold0132 (3 HSPs)
scaffold0132 (10-271)||(13506-13769)
scaffold0132 (313-393)||(42677-42754)
scaffold0132 (313-345)||(13824-13856)
[»] scaffold0026 (3 HSPs)
scaffold0026 (10-264)||(107747-108003)
scaffold0026 (139-255)||(64527-64648)
scaffold0026 (214-256)||(89863-89905)
[»] scaffold0125 (2 HSPs)
scaffold0125 (10-271)||(41648-41911)
scaffold0125 (305-345)||(41957-41997)
[»] scaffold1542 (1 HSPs)
scaffold1542 (10-271)||(534-797)
[»] scaffold0772 (2 HSPs)
scaffold0772 (139-264)||(5660-5785)
scaffold0772 (313-345)||(5846-5878)
[»] scaffold0075 (1 HSPs)
scaffold0075 (10-271)||(34460-34724)
[»] scaffold0529 (1 HSPs)
scaffold0529 (14-260)||(2966-3215)
[»] scaffold0215 (2 HSPs)
scaffold0215 (14-237)||(9371-9596)
scaffold0215 (14-237)||(16269-16494)
[»] scaffold0034 (1 HSPs)
scaffold0034 (313-393)||(80187-80267)
[»] scaffold0016 (3 HSPs)
scaffold0016 (312-393)||(166116-166197)
scaffold0016 (312-387)||(162036-162111)
scaffold0016 (313-386)||(116410-116483)
[»] scaffold0184 (1 HSPs)
scaffold0184 (313-393)||(31132-31212)
[»] scaffold0686 (2 HSPs)
scaffold0686 (313-387)||(5735-5809)
scaffold0686 (313-387)||(5941-6015)
[»] scaffold0420 (1 HSPs)
scaffold0420 (139-259)||(13325-13445)
[»] scaffold0116 (2 HSPs)
scaffold0116 (139-255)||(167-283)
scaffold0116 (313-393)||(30417-30497)
[»] scaffold0022 (2 HSPs)
scaffold0022 (10-221)||(5254-5466)
scaffold0022 (214-254)||(102923-102963)
[»] scaffold0342 (1 HSPs)
scaffold0342 (312-393)||(304-385)
[»] scaffold0622 (1 HSPs)
scaffold0622 (10-108)||(9382-9480)
[»] scaffold0369 (1 HSPs)
scaffold0369 (10-221)||(3722-3936)
[»] scaffold0076 (1 HSPs)
scaffold0076 (10-236)||(42997-43226)
[»] scaffold1711 (1 HSPs)
scaffold1711 (139-259)||(1304-1424)
[»] scaffold1164 (1 HSPs)
scaffold1164 (314-393)||(1701-1780)
[»] scaffold0122 (2 HSPs)
scaffold0122 (314-393)||(19802-19881)
scaffold0122 (314-393)||(24106-24185)
[»] scaffold0139 (2 HSPs)
scaffold0139 (139-237)||(14083-14181)
scaffold0139 (142-260)||(21115-21233)
[»] scaffold0066 (2 HSPs)
scaffold0066 (10-221)||(54416-54630)
scaffold0066 (313-345)||(45338-45370)
[»] scaffold0876 (1 HSPs)
scaffold0876 (314-384)||(94-164)
[»] scaffold0310 (2 HSPs)
scaffold0310 (314-388)||(6261-6335)
scaffold0310 (314-351)||(4-41)
[»] scaffold0361 (2 HSPs)
scaffold0361 (188-271)||(3370-3453)
scaffold0361 (12-64)||(3210-3262)
[»] scaffold0507 (1 HSPs)
scaffold0507 (313-386)||(1363-1436)
[»] scaffold0013 (1 HSPs)
scaffold0013 (329-386)||(35816-35873)
[»] scaffold1295 (1 HSPs)
scaffold1295 (329-386)||(442-499)
[»] scaffold0456 (2 HSPs)
scaffold0456 (214-255)||(1546-1587)
scaffold0456 (214-255)||(8691-8732)
[»] scaffold0123 (1 HSPs)
scaffold0123 (214-255)||(8216-8257)
[»] scaffold0104 (1 HSPs)
scaffold0104 (10-99)||(48514-48603)
[»] scaffold0084 (1 HSPs)
scaffold0084 (146-264)||(56106-56226)
[»] scaffold0058 (2 HSPs)
scaffold0058 (214-255)||(70307-70348)
scaffold0058 (313-345)||(57392-57424)
[»] scaffold0053 (1 HSPs)
scaffold0053 (329-386)||(76699-76756)
[»] scaffold0004 (1 HSPs)
scaffold0004 (313-346)||(193396-193429)
[»] scaffold0706 (1 HSPs)
scaffold0706 (313-345)||(6443-6475)
[»] scaffold0597 (1 HSPs)
scaffold0597 (313-345)||(878-910)
[»] scaffold0465 (1 HSPs)
scaffold0465 (313-345)||(9882-9914)
[»] scaffold0251 (1 HSPs)
scaffold0251 (313-345)||(13285-13317)
[»] scaffold0032 (4 HSPs)
scaffold0032 (313-345)||(55904-55936)
scaffold0032 (313-345)||(108075-108107)
scaffold0032 (10-87)||(104793-104871)
scaffold0032 (214-255)||(93773-93814)
[»] scaffold0207 (1 HSPs)
scaffold0207 (302-345)||(18015-18058)
[»] scaffold0006 (1 HSPs)
scaffold0006 (34-121)||(197390-197477)
[»] scaffold0409 (2 HSPs)
scaffold0409 (217-255)||(1348-1386)
scaffold0409 (217-255)||(9603-9641)
[»] scaffold1272 (1 HSPs)
scaffold1272 (329-386)||(632-689)
[»] scaffold0970 (1 HSPs)
scaffold0970 (27-88)||(2471-2532)
[»] scaffold0483 (1 HSPs)
scaffold0483 (329-386)||(6999-7056)
[»] scaffold0151 (1 HSPs)
scaffold0151 (214-255)||(22422-22463)
[»] scaffold0080 (1 HSPs)
scaffold0080 (329-386)||(43651-43708)
[»] scaffold0010 (1 HSPs)
scaffold0010 (329-386)||(31357-31414)
[»] scaffold0700 (1 HSPs)
scaffold0700 (34-98)||(2548-2612)
[»] scaffold0389 (1 HSPs)
scaffold0389 (214-254)||(10868-10908)
[»] scaffold0367 (1 HSPs)
scaffold0367 (313-345)||(17209-17241)
[»] scaffold0335 (1 HSPs)
scaffold0335 (313-345)||(5476-5508)
[»] scaffold0303 (1 HSPs)
scaffold0303 (313-345)||(4346-4378)
[»] scaffold0234 (1 HSPs)
scaffold0234 (313-345)||(17304-17336)
[»] scaffold0173 (1 HSPs)
scaffold0173 (313-345)||(5549-5581)
[»] scaffold0118 (1 HSPs)
scaffold0118 (313-345)||(34308-34340)
[»] scaffold0039 (1 HSPs)
scaffold0039 (313-345)||(12418-12450)


Alignment Details
Target: chr3 (Bit Score: 311; Significance: 1e-175; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 10 - 395
Target Start/End: Complemental strand, 16744377 - 16743991
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||| |||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16744377 catcatcaatccatgaacatgtatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 16744278  T
Q  110 caactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttatt 208  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||| ||| ||| |||||||||||||||||||||||    
T  16744277 caactataacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacacttatt 16744178  T
Q  209 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaat 308  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16744177 atcaattcatggatacaaacatatcatcaaagttggagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaat 16744078  T
Q  309 gatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttctcc 395  Q
    ||||||||||||| |||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  16744077 gatgatgattatggtaaagactaacctcgttaccttaattatctccaactattagctctagcttcactttagctcctatgattctcc 16743991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 21 - 345
Target Start/End: Original strand, 13838905 - 13839232
Alignment:
Q  21 catgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 120  Q
    |||||||||| |||||||||| ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| |||||| |||| |||||     
T  13838905 catgaatatgcatacccaaacaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatccaaccacaact 13839004  T
Q  121 tgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 218  Q
    |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | |||| |||||||||| |||| ||||||||||    
T  13839005 tagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcat 13839104  T
Q  219 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaaatgatgatgat 317  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13839105 gcatacaaacatatcatcacagttggagcacgaatttagcaacaattattcataatcaaaattcatacaacatttgaaaatttcacaaaatgatgatgat 13839204  T
Q  318 tatgataaagactaacccccttacctta 345  Q
    |||||| |||||||||||||||||||||    
T  13839205 tatgatgaagactaacccccttacctta 13839232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 10 - 345
Target Start/End: Complemental strand, 14842824 - 14842487
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| | |||||| | || |||||||||  | |||||| |||| |||| | ||||||||||| |||||||||| | ||||| |    
T  14842824 catcatcaatccatgaatatgcaaacccaatcaattattcatcaatcataacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaat 14842725  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||||||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| ||||    
T  14842724 taacaacaacttagcaaaattcaccaattgagcacaattttcataacttatcatttttacacatttgaacatgcaatttcaccaacaatcatacaattat 14842625  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 307  Q
      |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||| ||||     
T  14842624 cttcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgcaaag 14842525  T
Q  308 tgatgatgattatgataaagactaacccccttacctta 345  Q
    ||| ||||||||||||||||||||||||||||||||||    
T  14842524 tgaagatgattatgataaagactaacccccttacctta 14842487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 10 - 271
Target Start/End: Complemental strand, 17912744 - 17912483
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| |  |||||||||||| |||||||| |||| || ||| |||||| |||| ||| ||||||||||||||||    
T  17912744 catcatcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataacatcgattgaacatgaatcatagctcaatt 17912645  T
Q  110 caactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttatt 208  Q
    |||||||||||| ||||||||||| |||| |||||||||||||||||| |||||| |||||||||||||||| ||| | ||||||||||||||| ||||     
T  17912644 caactacaacatatcaaattcatcaattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttcaccaacaatcatacaattatc 17912545  T
Q  209 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  17912544 atcaattcatgcatacaaacatatcatc-aagttggagcacgaatttagcaacaattatccat 17912483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 10 - 345
Target Start/End: Original strand, 2049810 - 2050147
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | | ||||||||| |||| ||||| | ||||| |    
T  2049810 catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccatagcatcaattgaacaaaaatcaaatctcaaat 2049909  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| || || |||| | ||||||||| |||||| ||| | |||||||||| |||| ||||    
T  2049910 taacaacaacttagcaaaattcaccaattgagcacaattttcacaagttatcatgtttacatatttgaacatgtaatttcaccaacaatcttacaattat 2050009  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 307  Q
     ||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||| || ||||||    
T  2050010 catcaattcaggcatacaaacatatcgtcacagttggagcacgaatttagcaacaattatccataagcaaaattgatacaacatttgaaatttcacaaaa 2050109  T
Q  308 tgatgatgattatgataaagactaacccccttacctta 345  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2050110 tgatgatgattatgataaagactaacccccttacctta 2050147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 10 - 345
Target Start/End: Complemental strand, 12030410 - 12030073
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| | ||||||||||||| | |||||| |||| || | | | ||||||||| |||||||||| |  |||| |    
T  12030410 catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccataacatcaattaacaaccatagcatcaattgaacaagaatcaaatatcaaat 12030311  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| | ||| |  |||| |||| | |||  |||||| ||||| ||||| ||| || ||||||||| |||||| ||| | |||||||||| |||| ||||    
T  12030310 taacaataacttagcaaaattcaccaattgagcacaactttcacaacttatcacttttacatatttgaacatgtaatttcaccaacaatcttacaattat 12030211  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 307  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||| || ||||||    
T  12030210 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaagtcatacaacatttgaaatttcacaaaa 12030111  T
Q  308 tgatgatgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||| || ||||||||||||||||    
T  12030110 tgatgatgattatgataatgattaacccccttacctta 12030073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 10 - 308
Target Start/End: Complemental strand, 15859287 - 15858986
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| |||||||    
T  15859287 catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatt 15859188  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
    |||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | ||||||| |||||| ||| | ||||||||||||||| ||||    
T  15859187 caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcatatttgaacatgtaatttcaccaacaatcatacaattat 15859088  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaa 305  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||   ||||||||||||||| ||| ||||||||||    
T  15859087 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacaattg-aaatttacaa 15858989  T
Q  306 aat 308  Q
    |||    
T  15858988 aat 15858986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 209 - 393
Target Start/End: Original strand, 19231982 - 19232169
Alignment:
Q  209 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaattt-acaa 305  Q
    ||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||| ||||    
T  19231982 atcaattcatgaatataaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttcacaa 19232081  T
Q  306 aatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||    
T  19232082 aatgatgatgattaagataaagactaacccccttaccttaattatctccaactattagctctaacttcacttttgctcctatgattct 19232169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 106 - 271
Target Start/End: Complemental strand, 2449404 - 2449238
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  2449404 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 2449305  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2449304 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 2449238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 9 - 281
Target Start/End: Complemental strand, 51158282 - 51158008
Alignment:
Q  9 acatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 108  Q
    ||||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| ||||||    
T  51158282 acatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaat 51158183  T
Q  109 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
      ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||    
T  51158182 ctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaatta 51158083  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaatt 281  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||    
T  51158082 tcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaatt 51158008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 10 - 264
Target Start/End: Complemental strand, 15936890 - 15936634
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| |||| ||  | || |||||||||  |||||||| |||| |||| | ||||||||||| |||||||||| | ||||| |    
T  15936890 catcatcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaat 15936791  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| | ||||| |||| | |||  |||||||||||| ||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| ||||    
T  15936790 taacaacaacttatcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattat 15936691  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 264  Q
     ||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  15936690 catcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaat 15936634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 225 - 345
Target Start/End: Complemental strand, 19260869 - 19260749
Alignment:
Q  225 aaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgata 324  Q
    ||||||||||||| | || ||||||||||||||||||||| ||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19260869 aaacatatcatcataattagagcacgaatttagcaacaattatccataaaaaaaattcatacaacatttgaaaacttacaaaatgatgatgattatgata 19260770  T
Q  325 aagactaacccccttacctta 345  Q
    |||||||||||||||||||||    
T  19260769 aagactaacccccttacctta 19260749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 264
Target Start/End: Complemental strand, 15938729 - 15938476
Alignment:
Q  13 catcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaa 112  Q
    |||||||||||||||||| |||| ||  | || |||||||||  |||||||| |||| |||| | ||||||||||| |||||||||| | ||||| | ||    
T  15938729 catcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaattaa 15938630  T
Q  113 ctacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattat 210  Q
    | ||||| | ||||| |||| | |||  |||||||||||| ||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| |||| ||    
T  15938629 caacaacttatcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcat 15938530  T
Q  211 caattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 264  Q
    |||||||||  |||||||||||||| | |||||||||||| |||||| ||||||    
T  15938529 caattcatgattacaaacatatcattacagttggagcacgtatttagtaacaat 15938476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 139 - 271
Target Start/End: Complemental strand, 13975853 - 13975722
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||||||| |||||| ||| |||||||||||| |||   ||||||||||||||| | || | |||||||||||||||| |||||||||||    
T  13975853 gcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaa 13975755  T
Q  239 agttggagcacgaatttagcaacaatcatccat 271  Q
    |||||||||||||||||||||||||| ||||||    
T  13975754 agttggagcacgaatttagcaacaattatccat 13975722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 139 - 271
Target Start/End: Original strand, 45860937 - 45861068
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||||||| |||||| ||| |||||||||||| |||   ||||||||||||||| | || | |||||||||||||||| |||||||||||    
T  45860937 gcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaa 45861035  T
Q  239 agttggagcacgaatttagcaacaatcatccat 271  Q
    |||||||||||||||||||||||||| ||||||    
T  45861036 agttggagcacgaatttagcaacaattatccat 45861068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 139 - 271
Target Start/End: Complemental strand, 13955021 - 13954890
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||||||  |||||| ||| |||||||||||| |||   ||||||||||||||| | || | |||||||||||||||| |||||||||||    
T  13955021 gcacaatattcataactgatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaa 13954923  T
Q  239 agttggagcacgaatttagcaacaatcatccat 271  Q
    |||||||||||||||||||||||||| ||||||    
T  13954922 agttggagcacgaatttagcaacaattatccat 13954890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 310 - 388
Target Start/End: Complemental strand, 15857198 - 15857120
Alignment:
Q  310 atgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 388  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  15857198 atgatgattatgatgaagactaacccccttaccttaattatctccaagtattagctctagcttcactttagctcctatg 15857120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 313 - 393
Target Start/End: Original strand, 3992873 - 3992953
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  3992873 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 3992953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 313 - 393
Target Start/End: Original strand, 55513193 - 55513273
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  55513193 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 55513273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 313 - 393
Target Start/End: Original strand, 2844514 - 2844594
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||| ||||    
T  2844514 atgattatgataaaaactaacccccttaccttaattatctcaaactattagctctagcttcacttttgctcctatgattct 2844594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 14 - 346
Target Start/End: Original strand, 15614838 - 15615170
Alignment:
Q  14 atcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac 113  Q
    |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | |||||||||||  ||||||||| | | ||| | |||    
T  15614838 atcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaatcccaaattaac 15614937  T
Q  114 tacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc 211  Q
     | ||| | |  ||||||| | |||  |||| || |||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| |||    
T  15614938 aataacttagcaaaattcaccaattgagcaccatattcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcctacaattatcatc 15615037  T
Q  212 aattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatga 310  Q
    |||||||||||||||| ||| || || |||  |||||| ||| |||||  |||  | ||| || | |  ||||||||||||  |||||  | |||||| |    
T  15615038 aattcatgcatacaaatataacaccacagtaagagcacaaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaa--tgcaaaatta 15615135  T
Q  311 tgatgattatgataaagactaacccccttaccttaa 346  Q
      ||||||||||||||||||||||||||||||||||    
T  15615136 -catgattatgataaagactaacccccttaccttaa 15615170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 313 - 393
Target Start/End: Complemental strand, 54038056 - 54037976
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||| |||||| ||||||||||| ||||||||| ||||    
T  54038056 atgattatgataaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 54037976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 313 - 393
Target Start/End: Complemental strand, 17955916 - 17955832
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagct----ctagcttcactttagctcctatgcttct 393  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||    ||||||||||||| ||||||||| ||||    
T  17955916 atgattatgataaagactaacccccttaccttaattatctccaactattagctctacctagcttcacttttgctcctatgattct 17955832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 313 - 393
Target Start/End: Original strand, 7854305 - 7854385
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||| |||||| ||||||||||| ||||||||| ||||    
T  7854305 atgattatgatgaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 7854385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 139 - 259
Target Start/End: Original strand, 55316351 - 55316471
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  55316351 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 55316450  T
Q  239 agttggagcacgaatttagca 259  Q
    ||   ||||||||||||||||    
T  55316451 agcaagagcacgaatttagca 55316471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 237
Target Start/End: Original strand, 16821139 - 16821369
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||| |||||||||||||| | |||||| | || |||||||||  | || ||| | || |||  | ||||||||||| ||| |||||| | ||||| |    
T  16821139 catcattaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 16821238  T
Q  110 caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
    |||| ||||| |  |  ||||||| | |||| |||||||  ||||| |||  ||||| ||||||||| |||||| ||| | ||||||||||||||| |||    
T  16821239 caacaacaacttaggagaaattcaccaatttagcacaatactcatagcttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaatta 16821338  T
Q  207 ttatcaattcatgcatacaaacatatcatca 237  Q
    | ||||||| ||||||||||||||| |||||    
T  16821339 tcatcaatttatgcatacaaacataacatca 16821369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 374
Target Start/End: Original strand, 45581954 - 45582016
Alignment:
Q  313 atgattatgataaagactaacccc-cttaccttaattatctccaactactagctctagcttca 374  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  45581954 atgattatgataaaaactaaccccccttaccttaattatctccaactattagctctagcttca 45582016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 119
Target Start/End: Original strand, 47984650 - 47984759
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| ||||||||   ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||| | ||||||     
T  47984650 catcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatc 47984749  T
Q  110 caactacaac 119  Q
    |||| |||||    
T  47984750 caacaacaac 47984759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 119
Target Start/End: Original strand, 48003224 - 48003333
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| ||||||||   ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||| | ||||||     
T  48003224 catcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatc 48003323  T
Q  110 caactacaac 119  Q
    |||| |||||    
T  48003324 caacaacaac 48003333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 139 - 259
Target Start/End: Original strand, 41270207 - 41270327
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| |||   |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  41270207 gcacaatattcataacttatcatttttgcatatatgaacatgtaattccaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 41270306  T
Q  239 agttggagcacgaatttagca 259  Q
    ||   ||||||||||||||||    
T  41270307 agcaagagcacgaatttagca 41270327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 119
Target Start/End: Original strand, 47993937 - 47994046
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| ||||||||   ||||||||||||| |||| ||| |||| || ||| ||||||||||| ||| |||||| | ||||||     
T  47993937 catcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaaaatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatc 47994036  T
Q  110 caactacaac 119  Q
    |||| |||||    
T  47994037 caacaacaac 47994046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 119
Target Start/End: Original strand, 48012510 - 48012619
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| ||||||||   ||||||||||||| |||| ||| |||| || ||| ||||||||||| ||| |||||| | ||||||     
T  48012510 catcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaaaatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatc 48012609  T
Q  110 caactacaac 119  Q
    |||| |||||    
T  48012610 caacaacaac 48012619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 14080715 - 14080756
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 255  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  14080715 ttcatgcatacaaacatatcatcatagttggagcacgaattt 14080756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 329 - 386
Target Start/End: Original strand, 17205019 - 17205076
Alignment:
Q  329 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 386  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  17205019 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 17205076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 386
Target Start/End: Complemental strand, 38810941 - 38810868
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 386  Q
    ||||||||||| ||  ||||||||||||||||| ||||| |||| | ||||| | |||||||||||||||||||    
T  38810941 atgattatgatgaattctaacccccttaccttagttatcaccaattcctagcccaagcttcactttagctccta 38810868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 331 - 386
Target Start/End: Original strand, 12031849 - 12031904
Alignment:
Q  331 aacccccttaccttaattatctccaactactagctctagcttcactttagctccta 386  Q
    ||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  12031849 aacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 12031904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 345
Target Start/End: Original strand, 54651642 - 54651796
Alignment:
Q  192 acaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaaca 290  Q
    ||||||||||| |||| ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||||||| || ||| || | |  |||||||||||    
T  54651642 acaatcatacaattatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattattcatcaacccattttcatacaaca 54651741  T
Q  291 tttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 345  Q
    |  |||| |  | ||| |||  ||||||||||| ||||| |||||||||||||||    
T  54651742 tgagaaattgcaaaaattgaacatgattatgatgaagacaaacccccttacctta 54651796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 386
Target Start/End: Complemental strand, 13301396 - 13301323
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 386  Q
    ||||||||||| ||  ||||||||||||||||||||| | | || | ||||| | |||||||||||||||||||    
T  13301396 atgattatgatgaattctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 13301323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 386
Target Start/End: Complemental strand, 13312052 - 13311979
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 386  Q
    ||||||||||| ||  ||||||||||||||||||||| | | || | ||||| | |||||||||||||||||||    
T  13312052 atgattatgatgaattctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 13311979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 329 - 386
Target Start/End: Original strand, 17191879 - 17191936
Alignment:
Q  329 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 386  Q
    ||||||||||||||||||||||| |||| | ||||| | | |||||||||||||||||    
T  17191879 ctaacccccttaccttaattatcaccaattcctagcccaaacttcactttagctccta 17191936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 2449184 - 2449152
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  2449184 atgattatgataaagactaacccccttacctta 2449152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 16261777 - 16261809
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  16261777 atgattatgataaagactaacccccttacctta 16261809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 16933901 - 16933869
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  16933901 atgattatgataaagactaacccccttacctta 16933869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 17912430 - 17912398
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  17912430 atgattatgataaagactaacccccttacctta 17912398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 23492696 - 23492728
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  23492696 atgattatgataaagactaacccccttacctta 23492728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 38168237 - 38168269
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  38168237 atgattatgataaagactaacccccttacctta 38168269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 53771365 - 53771397
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  53771365 atgattatgataaagactaacccccttacctta 53771397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 386
Target Start/End: Complemental strand, 3576347 - 3576290
Alignment:
Q  329 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 386  Q
    ||||||||||||||||||||||| | || | ||||| | |||||||||||| ||||||    
T  3576347 ctaacccccttaccttaattatcacaaattcctagcccaagcttcactttacctccta 3576290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 127
Target Start/End: Complemental strand, 12265049 - 12264932
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||||||| | |||||||||||||   || ||||| | || ||||||||  |||  | ||||||||||||| | ||| |||||| | |||| ||    
T  12265049 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcattt 12264950  T
Q  110 caactacaacatgtcaaa 127  Q
    |||| ||||||| |||||    
T  12264949 caacaacaacatatcaaa 12264932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 314 - 379
Target Start/End: Original strand, 15550922 - 15550987
Alignment:
Q  314 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttta 379  Q
    |||||||||| ||  |||||||||||| |||||||||| |||| | ||||| | ||||||||||||    
T  15550922 tgattatgatgaattctaacccccttatcttaattatcaccaattcctagcccaagcttcacttta 15550987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 11986112 - 11986080
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||||||| |||||||||||||||||||||    
T  11986112 atgattatgatgaagactaacccccttacctta 11986080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 264
Target Start/End: Complemental strand, 11986245 - 11986173
Alignment:
Q  192 acaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 264  Q
    ||||||||||| |||| || || ||||||| || || ||| ||||| |||| ||||||||||||| |||||||    
T  11986245 acaatcatacaattatcattaaatcatgcacacgaaaataacatcacagttagagcacgaatttaacaacaat 11986173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 13954836 - 13954804
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||||| |||||||||||||||||||||||    
T  13954836 atgattatggtaaagactaacccccttacctta 13954804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 14285289 - 14285321
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||||||| |||||||||||||||||||||    
T  14285289 atgattatgatgaagactaacccccttacctta 14285321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 19947026 - 19947058
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||||||| |||||||||||||||||||||    
T  19947026 atgattatgatgaagactaacccccttacctta 19947058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 30153265 - 30153297
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||| ||||||||||||||||||    
T  30153265 atgattatgataaaaactaacccccttacctta 30153297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 33342204 - 33342236
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||||||||||||||||||| |||||||||    
T  33342204 atgattatgataaagactaaccctcttacctta 33342236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 45861122 - 45861154
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||||| |||||||||||||||||||||||    
T  45861122 atgattatggtaaagactaacccccttacctta 45861154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 51961063 - 51961031
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||||||| |||||||||||||||||||||    
T  51961063 atgattatgatgaagactaacccccttacctta 51961031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 219; Significance: 1e-120; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 10 - 271
Target Start/End: Complemental strand, 22907476 - 22907214
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22907476 catcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 22907377  T
Q  110 caactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttatt 208  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |||||    
T  22907376 caactacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattatt 22907277  T
Q  209 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22907276 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 22907214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 9 - 345
Target Start/End: Complemental strand, 16193980 - 16193643
Alignment:
Q  9 acatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 108  Q
    ||||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||| | |||||     
T  16193980 acatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcaaatctcaaa 16193881  T
Q  109 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
    | ||| ||||  || |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| |  |||||||||||||| |||    
T  16193880 ttaacaacaatttggcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttccccaacaatcatacaatta 16193781  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaa 306  Q
    | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||    
T  16193780 tcatcaattcatgcatacaaacatatcatcatagttggagcacgaatttagcaacaatcatccataagcaaaattcatacaatatttgaaaatttaccaa 16193681  T
Q  307 atgatgatgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  16193680 atgatgatgattatgataaagactaa-ccccttacctta 16193643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 10 - 393
Target Start/End: Complemental strand, 16405235 - 16404852
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| ||||||| || |||||||| |  |||||||||||||| |||||| |||| || ||| ||||||||||| ||||||||||||  ||||||    
T  16405235 catcatcaattcatgaatttgcatacccaagcagtgattcatcaactaaaacatcaattaacaacaataacatcaattgaacaagaatcatatgtcaatt 16405136  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     |||   ||| |  |||| |||| | |||  |||||||||||| |||||  ||||| | | ||||| |||||| ||| | ||||||||||||||| ||||    
T  16405135 taac---aacttagcaaaattcaccaattgagcacaattttcacaacttaacatttgttcctatttgaacatgtaatttcaccaacaatcatacaattat 16405039  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaa 305  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||| ||   |||||||||||||||||||||||||||| |    
T  16405038 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaataattatccatcatgcaaaaattcatacaacatttgaaaatttac-a 16404940  T
Q  306 aatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    ||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  16404939 aataatgatgattatgatgaagactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 16404852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 21 - 345
Target Start/End: Complemental strand, 24929043 - 24928716
Alignment:
Q  21 catgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 120  Q
    |||||||||| |||||||| | ||||||||||||  |||||||| |||| || | | ||| ||||||| ||||||  |||| |||||| |||| |||||     
T  24929043 catgaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacaaccataacctcaattgaacaagagacataactcaatccaaccacaact 24928944  T
Q  121 tgtc-aaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 218  Q
    |  | ||||||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||    
T  24928943 tagcgaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcat 24928844  T
Q  219 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaaatgatgatgat 317  Q
    |||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  24928843 gcatacaaacatataatcacagttggagcacgaatttagcaacaattatccataatcaaaattcatacaacatttgaaaatttcacaaaatgacgatgat 24928744  T
Q  318 tatgataaagactaacccccttacctta 345  Q
    ||||||||||||||||||| ||||||||    
T  24928743 tatgataaagactaaccccattacctta 24928716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 10 - 345
Target Start/End: Complemental strand, 43373731 - 43373392
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| | || |||||||||| |||||||| |||| || | | | ||||||||| |||||||||| | ||||| |    
T  43373731 catcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaaccatagcatcaattgaacaagaatcaaatctcaaat 43373632  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||| | ||||    
T  43373631 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatataattat 43373532  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaa 305  Q
     |||||||||||||||||||| |||||||| |||||||||||||||||||||  ||| |||||| ||   |||||||||||||||||||||| || ||||    
T  43373531 catcaattcatgcatacaaacgtatcatcacagttggagcacgaatttagcattaattatccattatacaaaaattcatacaacatttgaaatttcacaa 43373432  T
Q  306 aatgatgatgattatgataaagactaacccccttacctta 345  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  43373431 aatgatgatgattatgataaagactaacccccttacctta 43373392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 106 - 271
Target Start/End: Original strand, 5238184 - 5238350
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  5238184 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 5238283  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5238284 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 5238350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 106 - 271
Target Start/End: Complemental strand, 24661414 - 24661248
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  24661414 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 24661315  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24661314 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 24661248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 106 - 271
Target Start/End: Original strand, 43685643 - 43685809
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  43685643 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 43685742  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  43685743 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 43685809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 21 - 271
Target Start/End: Original strand, 17345581 - 17345832
Alignment:
Q  21 catgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 120  Q
    |||||||||| |||||||| |  |||||||||||| |||||||| |||| || ||| || ||||| || |||||||||||| ||||||||| | | |||     
T  17345581 catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataatatcaactgaacaagaatcataactcaattca-caataact 17345679  T
Q  121 tgtcaaattc-atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 218  Q
    |  |||| || ||| |||  ||||||||||||||||||| ||||| |||||| || ||||||  || | ||||||||||||||| |||| ||||||||||    
T  17345680 tagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcat 17345779  T
Q  219 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
    ||||| ||||||| ||||| |||| |||||||||||| |||||||| ||||||    
T  17345780 gcatataaacataacatcacagttagagcacgaatttcgcaacaattatccat 17345832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 14 - 259
Target Start/End: Complemental strand, 6774505 - 6774258
Alignment:
Q  14 atcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac 113  Q
    |||||| |||||||||| |||||||| |  |||||||||||| |||||||| | || || ||| |||||||||||  ||||||||| | ||||| | |||    
T  6774505 atcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaaattaac 6774406  T
Q  114 tacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc 211  Q
     | ||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||    
T  6774405 aataacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatc 6774306  T
Q  212 aattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 259  Q
    |||||||||||||||||||| ||||| |||  |||||||||| |||||    
T  6774305 aattcatgcatacaaacataacatcacagtaagagcacgaatctagca 6774258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 24548986 - 24549233
Alignment:
Q  14 atcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac 113  Q
    |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | |||||||||||  ||||||||| | | ||| | |||    
T  24548986 atcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaatcccaaattaac 24549085  T
Q  114 tacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc 211  Q
     | ||| |  |||| |||| | |||  |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||    
T  24549086 aataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatc 24549185  T
Q  212 aattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 259  Q
    |||||||||||||||||||| ||||| |||  |||||||||| |||||    
T  24549186 aattcatgcatacaaacataacatcacagtaagagcacgaatctagca 24549233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 313 - 393
Target Start/End: Original strand, 274766 - 274846
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  274766 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 274846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 313 - 393
Target Start/End: Complemental strand, 641083 - 641003
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  641083 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 641003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 313 - 393
Target Start/End: Complemental strand, 826889 - 826809
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  826889 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 826809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 313 - 393
Target Start/End: Complemental strand, 24716794 - 24716714
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||| ||||    
T  24716794 atgattatgataaagactaacccccttaccttaattatcaccaactattagctctagcttcacttttgctcctatgattct 24716714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 139 - 255
Target Start/End: Complemental strand, 21844692 - 21844576
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||||||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || ||||||||||||||||||||||| |||||     
T  21844692 gcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcac 21844593  T
Q  239 agttggagcacgaattt 255  Q
    ||   ||||||||||||    
T  21844592 agcaagagcacgaattt 21844576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 139 - 255
Target Start/End: Complemental strand, 21852085 - 21851969
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||||||| |||||| |||||||||||||||  ||| | ||||||||||||||| | || ||||||||||||||||||||||| |||||     
T  21852085 gcacaatattcataacttatcatttttacatatttaaacatttaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcac 21851986  T
Q  239 agttggagcacgaattt 255  Q
    ||   ||||||||||||    
T  21851985 agcaagagcacgaattt 21851969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 139 - 259
Target Start/End: Original strand, 30120854 - 30120974
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  || |||||||||||||||||||| |||||     
T  30120854 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcatacaaacataacatcac 30120953  T
Q  239 agttggagcacgaatttagca 259  Q
    ||   ||||||||||||||||    
T  30120954 agcaagagcacgaatttagca 30120974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 313 - 393
Target Start/End: Original strand, 39115598 - 39115678
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    ||||||||||| || |||||| ||||||||||||||||  ||||||| |||||| ||||||||||| ||||||||| ||||    
T  39115598 atgattatgatgaaaactaacacccttaccttaattattaccaactattagctcaagcttcacttttgctcctatgattct 39115678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 139 - 259
Target Start/End: Complemental strand, 16674512 - 16674392
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  || |||||||||||| ||||||| |||||     
T  16674512 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcataaaaacataacatcac 16674413  T
Q  239 agttggagcacgaatttagca 259  Q
    ||   ||||||||||||||||    
T  16674412 agaaagagcacgaatttagca 16674392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 121
Target Start/End: Original strand, 23837214 - 23837308
Alignment:
Q  27 tatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 121  Q
    |||| |||||||| | |||| |||||||| ||||||||  |||||| ||||||||||||||| ||| || || || | ||||||||| |||||||    
T  23837214 tatgaatacccaagccatgaatcatcaacaacaacatcacttagcaacaacaacatcaattgaacatgactcttaccacaattcaacaacaacat 23837308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 329 - 386
Target Start/End: Original strand, 17285543 - 17285600
Alignment:
Q  329 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 386  Q
    ||||||||||||||||||||||| |||| | ||| | | |||||||||||||||||||    
T  17285543 ctaacccccttaccttaattatcaccaattcctaacccaagcttcactttagctccta 17285600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 329 - 386
Target Start/End: Complemental strand, 21198062 - 21198005
Alignment:
Q  329 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 386  Q
    |||||||||||| |||||||||| |||| | ||||| | |||||||||||||||||||    
T  21198062 ctaacccccttatcttaattatcaccaattcctagcccaagcttcactttagctccta 21198005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 5238404 - 5238436
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  5238404 atgattatgataaagactaacccccttacctta 5238436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 22907160 - 22907128
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  22907160 atgattatgataaagactaacccccttacctta 22907128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 24385684 - 24385652
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  24385684 atgattatgataaagactaacccccttacctta 24385652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 24661194 - 24661162
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  24661194 atgattatgataaagactaacccccttacctta 24661162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 43685863 - 43685895
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  43685863 atgattatgataaagactaacccccttacctta 43685895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 196
Target Start/End: Complemental strand, 222943 - 222754
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| |||||||||| | ||||| |    
T  222943 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 222844  T
Q  110 caactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaat 196  Q
     ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||    
T  222843 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 222754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 196
Target Start/End: Complemental strand, 736566 - 736377
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| |||||||||| | ||||| |    
T  736566 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 736467  T
Q  110 caactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaat 196  Q
     ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||    
T  736466 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 736377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 196
Target Start/End: Complemental strand, 860461 - 860272
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| |||||||||| | ||||| |    
T  860461 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 860362  T
Q  110 caactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaat 196  Q
     ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||    
T  860361 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 860272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 23149985 - 23150026
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 255  Q
    ||||||||| |||||||||||||| | |||||||||||||||    
T  23149985 ttcatgcattcaaacatatcatcataattggagcacgaattt 23150026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 23226117 - 23226076
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 255  Q
    |||||||||||||||||||||||| |||| |||||| |||||    
T  23226117 ttcatgcatacaaacatatcatcatagttagagcacaaattt 23226076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 2545265 - 2545297
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||||||| |||||||||||||||||||||    
T  2545265 atgattatgatgaagactaacccccttacctta 2545297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 3431208 - 3431176
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||||||| |||||||||||||||||||||    
T  3431208 atgattatgatgaagactaacccccttacctta 3431176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 22886654 - 22886686
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||||||| |||||||||||||||||||||    
T  22886654 atgattatgattaagactaacccccttacctta 22886686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 219; Significance: 1e-120; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 10 - 271
Target Start/End: Original strand, 26680201 - 26680463
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26680201 catcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 26680300  T
Q  110 caactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttatt 208  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||| |||||| |||||||||||||||| ||| ||||||||||||||||| |||||    
T  26680301 caactacaacatgtcaaattcatctattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattatt 26680400  T
Q  209 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26680401 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 26680463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 10 - 393
Target Start/End: Complemental strand, 54118507 - 54118120
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| || |||     
T  54118507 catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaactataacatcaattgaacaagaatcataactaaatc 54118408  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| ||| || | | ||||| |||||| ||| | ||||||||||||||| ||||    
T  54118407 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcaattgttcctatttgaacatgtaatttcaccaacaatcatacaattat 54118308  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaa 305  Q
     ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||   ||||||||||||||||||||||||| ||||    
T  54118307 catcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaattcacaa 54118208  T
Q  306 aatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    ||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||| ||||    
T  54118207 aataatgatgattatgatgaagactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcttatgattct 54118120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 10 - 345
Target Start/End: Original strand, 13246430 - 13246769
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| ||||||     
T  13246430 catcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatc 13246529  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| ||||    
T  13246530 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattat 13246629  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaa 305  Q
     || |||||||||||||||||||||||||| ||||| |||||||||||| ||||||| |||||| ||   ||||||||||||||||||||||||||||||    
T  13246630 cattaattcatgcatacaaacatatcatcacagttgtagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaa 13246729  T
Q  306 aatgatgatgattatgataaagactaacccccttacctta 345  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  13246730 aatgatgatgattatgataaagactaacccccttacctta 13246769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 10 - 345
Target Start/End: Complemental strand, 15675352 - 15675009
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| ||||||||||||||||||| | ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| |||||||    
T  15675352 catcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaatt 15675253  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
    |||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| ||||    
T  15675252 caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattat 15675153  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaa 305  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || |||    
T  15675152 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaa 15675053  T
Q  306 a----atgatgatgattatgataaagactaacccccttacctta 345  Q
    |    ||||||||||||||||| |||||||||||||||||||||    
T  15675052 aaatgatgatgatgattatgatgaagactaacccccttacctta 15675009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 139 - 345
Target Start/End: Original strand, 122020 - 122226
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| |||||||||||||||||||||||||||||     
T  122020 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 122119  T
Q  239 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 338  Q
    ||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  122120 agttggagcacaaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaatcccct 122219  T
Q  339 tacctta 345  Q
    |||||||    
T  122220 tacctta 122226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 106 - 271
Target Start/End: Original strand, 10488659 - 10488825
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  10488659 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 10488758  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10488759 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 10488825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 106 - 271
Target Start/End: Complemental strand, 16328092 - 16327926
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  16328092 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 16327993  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16327992 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 16327926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 74 - 345
Target Start/End: Complemental strand, 10104449 - 10104170
Alignment:
Q  74 caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatat 171  Q
    ||||||||||||||| ||| |||||||| ||||||||||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| ||||||     
T  10104449 caacaacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataa 10104350  T
Q  172 ttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca- 270  Q
    || |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||     
T  10104349 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacggatttagcaacaattatccaa 10104250  T
Q  271 -taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaacccccttacctta 345  Q
     ||   ||||||||||| ||||||||||| ||  |||    ||||||||||||||||| |||||||||||||||||||||    
T  10104249 ttatgaaaaattcataccacatttgaaaaattgtaaaaatgatgatgatgattatgatgaagactaacccccttacctta 10104170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 10 - 244
Target Start/End: Original strand, 31115629 - 31115865
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| ||||||||||||||||||| | ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| |||||||    
T  31115629 catcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaatt 31115728  T
Q  110 caactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
    |||| ||||| | |  ||||||| | |||  ||| |||||||| |||||| ||||| |||||| |  |||||| ||| | ||||||||||||||| ||||    
T  31115729 caacaacaacttaggaaaattcaccaattgagcataattttcacaacttcacatttttacataatggaacatgtaatttcaccaacaatcatacaattat 31115828  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttgg 244  Q
     ||||||||||||||||||||||||||||| ||||||    
T  31115829 catcaattcatgcatacaaacatatcatcacagttgg 31115865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 209 - 345
Target Start/End: Original strand, 33240901 - 33241043
Alignment:
Q  209 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa 306  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    
T  33240901 atcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaa 33241000  T
Q  307 ----atgatgatgattatgataaagactaacccccttacctta 345  Q
        ||||||||||||||||| |||||||||||||||||||||    
T  33241001 aatgatgatgatgattatgatgaagactaacccccttacctta 33241043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 139 - 271
Target Start/End: Complemental strand, 13048353 - 13048221
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||||||| || ||| |||||||||||||||| ||| | ||||||||||||||| | || ||||| |||||||||||||||||||||  |    
T  13048353 gcacaatattcataacttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaaatcatgcatacaaacatatcattga 13048254  T
Q  239 agttggagcacgaatttagcaacaatcatccat 271  Q
    |||||||||| ||||||||||||||| ||||||    
T  13048253 agttggagcatgaatttagcaacaattatccat 13048221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 313 - 393
Target Start/End: Complemental strand, 25119139 - 25119059
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  25119139 atgattatgataaaaactaactcccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 25119059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 10 - 255
Target Start/End: Original strand, 10644219 - 10644467
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| | |||||| | || |||||||||  | || ||| | || |||  | ||||||||||| ||| |||||| | ||||| |    
T  10644219 catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 10644318  T
Q  110 caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
    |||| ||||| |  |  ||||||| | |||| |||||||  |||||||||  ||||| ||||||||| |||||| ||| | || |||||||||||| |||    
T  10644319 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcactaacaatcatacaatta 10644418  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 255  Q
    | ||||||||||||||||||||||| ||||| ||   ||||||||||||    
T  10644419 tcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 10644467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 313 - 393
Target Start/End: Complemental strand, 5682460 - 5682380
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    |||||||||||||| |||||||| ||||||||||||||| ||||||| ||||||  |||||||||| ||||||||| ||||    
T  5682460 atgattatgataaaaactaacccacttaccttaattatcaccaactattagctcatgcttcacttttgctcctatgattct 5682380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 239 - 345
Target Start/End: Original strand, 31132545 - 31132657
Alignment:
Q  239 agttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaa 332  Q
    |||||||||||||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    |||||||| |||||||| ||||||||    
T  31132545 agttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaaaatgatgatgataattatgatgaagactaa 31132644  T
Q  333 cccccttacctta 345  Q
    |||||||||||||    
T  31132645 cccccttacctta 31132657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 111395 - 111493
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 108  Q
    |||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| ||||||    
T  111395 catcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcataactcaat 111493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 259
Target Start/End: Original strand, 47357654 - 47357906
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||  |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| |||||||||| | ||||| |    
T  47357654 catcatcaatccatgaatatacatacccaatcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 47357753  T
Q  110 caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
     ||| ||||| |  |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||    
T  47357754 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta 47357853  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 259  Q
      |||||| |||||||||||||||| ||||| ||   ||||||||||||||||    
T  47357854 acatcaatccatgcatacaaacataacatcacagcaagagcacgaatttagca 47357906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 74 - 255
Target Start/End: Complemental strand, 40885753 - 40885570
Alignment:
Q  74 caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacata- 170  Q
    ||||||||||||||| ||| |||||||| ||||||||||| | ||| |  |||| |||| | |||  ||| ||||| ||||||||  ||||| ||||||     
T  40885753 caacaacatcaattgaacatgaatcatatctcaattcaacaataacttagcaaagttcaccaattgagcataattt-cataacttgacatttatacatac 40885655  T
Q  171 tttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 255  Q
    ||| |||||| ||| | |||||||| ||| || |||| | ||||||||||||||||||||| || || |||||||| ||||||||    
T  40885654 tttgaacatgtaatttcaccaacaaacattcaattatcaccaattcatgcatacaaacatagcaccacagttggagtacgaattt 40885570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 386
Target Start/End: Complemental strand, 41165881 - 41165808
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 386  Q
    ||||||||||| ||  ||||||||||||| ||||||||| |||| | ||||| | |||||||||||||||||||    
T  41165881 atgattatgatgaattctaacccccttacgttaattatcaccaattcctagcccaagcttcactttagctccta 41165808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 121
Target Start/End: Complemental strand, 41166177 - 41166083
Alignment:
Q  27 tatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 121  Q
    |||| |||||||| | ||||||||||||| ||||||||  |||||| ||||||||||||||| ||| || || |  | ||||||||| |||||||    
T  41166177 tatgaatacccaagccatgattcatcaacaacaacatcacttagcaacaacaacatcaattgaacatgactcttgccacaattcaacaacaacat 41166083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 10104494 - 10104449
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaac 55  Q
    |||||||||| ||||||||||||||||||| | |||||||||||||    
T  10104494 catcatcaattcatgaatatgtatacccaagcaatgattcatcaac 10104449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 329 - 386
Target Start/End: Complemental strand, 47534990 - 47534933
Alignment:
Q  329 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 386  Q
    ||||||||||||||||||||||| |||| | || || | |||||||||||||||||||    
T  47534990 ctaacccccttaccttaattatcaccaattcctcgcccaagcttcactttagctccta 47534933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 14952085 - 14952117
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  14952085 atgattatgataaagactaacccccttacctta 14952117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 15135939 - 15135907
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  15135939 atgattatgataaagactaacccccttacctta 15135907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 15272243 - 15272211
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  15272243 atgattatgataaagactaacccccttacctta 15272211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 16327872 - 16327840
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  16327872 atgattatgataaagactaacccccttacctta 16327840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 16609045 - 16609013
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  16609045 atgattatgataaagactaacccccttacctta 16609013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 26680517 - 26680549
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  26680517 atgattatgataaagactaacccccttacctta 26680549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 121
Target Start/End: Original strand, 15044851 - 15044938
Alignment:
Q  34 acccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 121  Q
    |||||| | |||| |||||| | ||||||||  |||||| ||||||||||||||| ||| ||||| || | ||||||||| |||||||    
T  15044851 acccaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacat 15044938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 121
Target Start/End: Complemental strand, 52265758 - 52265645
Alignment:
Q  9 acatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaa 107  Q
    ||||||||||  ||||||| ||| | |||||| | |||| ||||||||  ||| |||  |||||| ||||||||||||||| ||| ||||| || | |||    
T  52265758 acatcatcaaatcatgaattatgaacacccaagccatgaatcatcaacatcaatatcacttagcaacaacaacatcaattgaacatgaatcttatcacaa 52265659  T
Q  108 ttcaactacaacat 121  Q
    |||||| |||||||    
T  52265658 ttcaacaacaacat 52265645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 8045272 - 8045304
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||||||| |||||||||||||||||||||    
T  8045272 atgattatgatgaagactaacccccttacctta 8045304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 13809551 - 13809511
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaatt 254  Q
    ||||||||| |||||||||||||| | ||||||||||||||    
T  13809551 ttcatgcattcaaacatatcatcataattggagcacgaatt 13809511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 13809711 - 13809647
Alignment:
Q  57 acaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 121  Q
    |||||||| ||||||| |||||||||||||||  || ||||| || | ||||||||| |||||||    
T  13809711 acaacatcaattagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacat 13809647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 16523146 - 16523178
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||||||| |||||||||||||||||||||    
T  16523146 atgattatgatgaagactaacccccttacctta 16523178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 216; Significance: 1e-118; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 10 - 395
Target Start/End: Original strand, 41394222 - 41394609
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| |||||||| |  |||||||||||| |||||||| | || || ||| |||||||||||  ||||||||| | |||||      
T  41394222 catcatcaatccatgaatatgcatacccaatcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaaca 41394321  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| | ||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||  | ||||||||||||||| ||||    
T  41394322 taacaataacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaacttcaccaacaatcatacaattat 41394421  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 307  Q
     ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41394422 catcaatttatgcatacaaacatatcatcatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 41394521  T
Q  308 tgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttctcc 395  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  41394522 tgatgatgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgattctcc 41394609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 10 - 345
Target Start/End: Original strand, 20931345 - 20931682
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||| ||| |||||||||| ||||||||   || |||||||||| |||||||| |||| || | | ||||||||||| |||||||||| | ||||| |    
T  20931345 catcattaattcatgaatatgcatacccaagaaattattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcaaatctcaaat 20931444  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||  |  |||| |||| | |||| |||||||||||||||||| |||||| ||||||| | |||||| ||| | |||||||||| |||| ||||    
T  20931445 taacaacaatttagcaaaattcaccaatttagcacaattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattat 20931544  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 307  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||| ||||||||||| |||||||||| |||||    
T  20931545 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaacttcatacaacaattgaaaatttgcaaaa 20931644  T
Q  308 tgatgatgattatgataaagactaacccccttacctta 345  Q
    ||| |||||||||||||||| |||||||||||||||||    
T  20931645 tgaggatgattatgataaaggctaacccccttacctta 20931682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 10 - 345
Target Start/End: Original strand, 20445679 - 20446019
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||| ||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | |||||||||||  ||||||||||| | |||||    
T  20445679 catcctcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacagccataacatcaattgatcaagaatcataacacaatt 20445778  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
    |||| ||||| |  |||| |||| | |||  ||||||||||||  |||| |||||| | | || || |||||| ||| | ||||||||||||||| ||||    
T  20445779 caacaacaacttagcaaaattcaccaattgagcacaattttcaccacttatcatttgttcctacttgaacatgtaatttcaccaacaatcatacaattat 20445878  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaattt-aca 304  Q
     ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||| |||    
T  20445879 catcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttcaca 20445978  T
Q  305 aaatgatgatgattatgataaagactaacccccttacctta 345  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  20445979 aaatgatgatgattatgataaagactaactcccttacctta 20446019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 10 - 345
Target Start/End: Complemental strand, 20893889 - 20893551
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||  ||||||||| |||||||||| ||||||||||||| |||||||| |||| ||   | ||||||||||| ||||||||||||  |||||     
T  20893889 catcatcaatttatgaatatgcatacccaaacaatgattcatcaaccacaacatcaattaacagtcataacatcaattgaacaagaatcataaatcaatc 20893790  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | | ||||||||||||| ||||    
T  20893789 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaacaacaatcatacaattat 20893690  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaa 305  Q
     ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||| ||   ||||||||||||||||||||||| ||||||    
T  20893689 catcaattcatgcatacaaacatatcatcacagttggagcaagaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaa-ttacaa 20893591  T
Q  306 aatgatgatgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  20893590 aatgatgatgattatgatgaagactaacccccttacctta 20893551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 10 - 345
Target Start/End: Original strand, 20913037 - 20913367
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| | || |||||||||| |||| ||| |||| || | | ||||||||||| ||||||||||      ||||    
T  20913037 catcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaagatcaattaacaaccataacatcaattgaacaagaatca------aatt 20913130  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||||||||| |||||| ||||||| | |||||| ||| | |||||||||| |||| ||||    
T  20913131 -aacaacaactttgcaaaattcaccaattgagcacaattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattat 20913229  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 307  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||||||| |||||    
T  20913230 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccgtaagcaaaattcatacaacaattgaaaatttgcaaaa 20913329  T
Q  308 tgatgatgattatgataaagactaacccccttacctta 345  Q
    ||| |||||||| |||||||||||||||||||||||||    
T  20913330 tgaggatgattacgataaagactaacccccttacctta 20913367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 10 - 345
Target Start/End: Complemental strand, 37844714 - 37844374
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||| ||||| |||||||||| |||||||| | |||| |||||||| |||||||| |||| || | | ||||||||||| |||||||||||| ||||||     
T  37844714 catcctcaattcatgaatatgcatacccaagcaatgactcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcataactcaatc 37844615  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttca-taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
     ||| ||||| |  |||| |||||  |||  |||||||||||| ||  || |||||| | | || || |||||| ||| | ||||||||||||||| |||    
T  37844614 taacaacaacttagcaaaattcattaattgagcacaattttcactattttatcatttgttcctacttgaacatgtaatttcaccaacaatcatacaatta 37844515  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttaca 304  Q
    | ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||| ||   ||||||||||||||||||||||||| |||    
T  37844514 tcatcaattcatgcatacaaacatatcatcatagttggagcatgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaattcaca 37844415  T
Q  305 aaatgatgatgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  37844414 aaatgatgatgattatgataaagactaacccccttacctta 37844374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 10 - 345
Target Start/End: Original strand, 20531444 - 20531783
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||| ||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | |||||||||||  ||||||||||| | |||||    
T  20531444 catcctcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacagccataacatcaattgatcaagaatcataacacaatt 20531543  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
    |||| ||||| |  |||| |||| | |||  ||||||||||||  |||| |||||| | | || || |||||| ||| | ||||||||||||||| ||||    
T  20531544 caacaacaacttagcaaaattcaccaattgagcacaattttcaccacttatcatttgttcctacttgaacatgtaatttcaccaacaatcatacaattat 20531643  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaa 305  Q
     |||||||||||||||||||||||| |||| | |||||||||||||||||||||||| |||||| ||   ||||||||||||||||||||||||| ||||    
T  20531644 catcaattcatgcatacaaacatattatcacatttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaattcacaa 20531743  T
Q  306 aatgatgatgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||   ||||||||||    
T  20531744 aatgatgatgattatgataaagactaatttccttacctta 20531783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 106 - 271
Target Start/End: Original strand, 51452589 - 51452755
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  51452589 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 51452688  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  51452689 tattatcaattcatgcatacaaacatatcatcaaagttgaagcacgaatttagcaacaattatccat 51452755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 10 - 344
Target Start/End: Original strand, 22227809 - 22228146
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| | |||||| | || |||||||||  | |||||| |||| |||  | ||||||||||| |||||||||| | ||||| |    
T  22227809 catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaat 22227908  T
Q  110 caactacaacatgtcaaa-ttcatccatttg-cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | ||| | ||||||||||||||||| |||||| ||||||||| |||||| ||| | || |||||||||||| ||||    
T  22227909 taacaacaacttagcaaaattcaacaattggacacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattat 22228008  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaa 306  Q
     ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||| |||  | ||| || | |  ||||||||||||  ||||||  | |||    
T  22228009 catcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 22228108  T
Q  307 atgatgatgattatgataaagactaacccccttacctt 344  Q
     ||   |||||||||||||  |||||||||||||||||    
T  22228109 ttgtacatgattatgataataactaacccccttacctt 22228146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 10 - 344
Target Start/End: Original strand, 22232506 - 22232843
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| | |||||| | || |||||||||  | |||||| |||| |||  | ||||||||||| |||||||||| | ||||| |    
T  22232506 catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaat 22232605  T
Q  110 caactacaacatgtcaaa-ttcatccatttg-cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | ||| | ||||||||||||||||| |||||| ||||||||| |||||| ||| | || |||||||||||| ||||    
T  22232606 taacaacaacttagcaaaattcaacaattggacacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattat 22232705  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaa 306  Q
     ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||| |||  | ||| || | |  ||||||||||||  ||||||  | |||    
T  22232706 catcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 22232805  T
Q  307 atgatgatgattatgataaagactaacccccttacctt 344  Q
     ||   |||||||||||||  |||||||||||||||||    
T  22232806 ttgtacatgattatgataataactaacccccttacctt 22232843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 2116258 - 2116506
Alignment:
Q  14 atcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagc-tcaattcaa 112  Q
    |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | |||||||||||  ||||||||| |   |||| | ||    
T  2116258 atcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaaatatcaaattaa 2116357  T
Q  113 ctacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattat 210  Q
    | | ||| |  |||| |||| | |||  |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||    
T  2116358 caataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcat 2116457  T
Q  211 caattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 259  Q
    ||||||||||||||||||||| ||||| |||   ||||||||| |||||    
T  2116458 caattcatgcatacaaacataacatcacagtaaaagcacgaatctagca 2116506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 313 - 393
Target Start/End: Original strand, 21860334 - 21860414
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  21860334 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 21860414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 313 - 387
Target Start/End: Complemental strand, 44034903 - 44034829
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctat 387  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  44034903 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 44034829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 139 - 346
Target Start/End: Original strand, 45051554 - 45051759
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||| || |||||     
T  45051554 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatcac 45051653  T
Q  239 agttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccc 337  Q
    |||  || ||||||| |||||  |||  | ||| || | |  ||||||||||||  |||||  | |||||| |  |||||||||||||||||||||||||    
T  45051654 agtaagaacacgaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaa--tgcaaaatca-catgattatgataaagactaaccccc 45051750  T
Q  338 ttaccttaa 346  Q
    |||||||||    
T  45051751 ttaccttaa 45051759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 279 - 386
Target Start/End: Original strand, 27675086 - 27675191
Alignment:
Q  279 attcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 378  Q
    |||||||||||| |||||||||||||  |  |  | ||||||||||||  |||||||||||||||||||||||||||| | ||||| | |||||||||||    
T  27675086 attcatacaacaattgaaaatttacactaaaa--acgattatgataaattctaacccccttaccttaattatctccaattcctagcccaagcttcacttt 27675183  T
Q  379 agctccta 386  Q
    ||||||||    
T  27675184 agctccta 27675191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 313 - 393
Target Start/End: Original strand, 41218728 - 41218808
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    ||||| ||||| || |||||||||||||||||||||||| ||||||| |||||| ||||||||||| ||||||||| ||||    
T  41218728 atgatcatgatgaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 41218808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 139 - 259
Target Start/End: Complemental strand, 5072508 - 5072388
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||| ||||||| |||||     
T  5072508 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatataaacataacatcac 5072409  T
Q  239 agttggagcacgaatttagca 259  Q
    ||   ||||||||||||||||    
T  5072408 agcaagagcacgaatttagca 5072388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 139 - 259
Target Start/End: Complemental strand, 18601238 - 18601118
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  18601238 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 18601139  T
Q  239 agttggagcacgaatttagca 259  Q
    ||   ||||| ||||||||||    
T  18601138 agcaagagcatgaatttagca 18601118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 329 - 386
Target Start/End: Complemental strand, 13376768 - 13376711
Alignment:
Q  329 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 386  Q
    ||||||||||||||||||||||| |||| | ||||| | | |||||||||||||||||    
T  13376768 ctaacccccttaccttaattatcaccaattcctagcccaaacttcactttagctccta 13376711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 329 - 386
Target Start/End: Original strand, 20177513 - 20177570
Alignment:
Q  329 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 386  Q
    |||||||| |||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  20177513 ctaaccccattaccttaattatcaccaattcctagcccaagcttcactttagctccta 20177570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 344
Target Start/End: Complemental strand, 15861358 - 15861327
Alignment:
Q  313 atgattatgataaagactaacccccttacctt 344  Q
    ||||||||||||||||||||||||||||||||    
T  15861358 atgattatgataaagactaacccccttacctt 15861327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 22143402 - 22143361
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 255  Q
    |||||||||||||||| ||||||| |||| ||||||||||||    
T  22143402 ttcatgcatacaaacacatcatcatagttagagcacgaattt 22143361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 51452809 - 51452841
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||| |||||||||||||||||||||||||    
T  51452809 atgattaagataaagactaacccccttacctta 51452841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 211; Significance: 1e-115; HSPs: 3)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 10 - 271
Target Start/End: Complemental strand, 37328 - 37066
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  37328 catcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatc 37229  T
Q  110 caactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttatt 208  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |||||    
T  37228 caactacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattatt 37129  T
Q  209 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37128 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 37066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 313 - 393
Target Start/End: Original strand, 41632 - 41712
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  41632 atgattgtgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 41712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 37012 - 36980
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  37012 atgattatgataaagactaacccccttacctta 36980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 211; Significance: 1e-115; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 10 - 271
Target Start/End: Original strand, 7293017 - 7293279
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7293017 catcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 7293116  T
Q  110 caactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttatt 208  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |||||    
T  7293117 caacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattatt 7293216  T
Q  209 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7293217 attaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 7293279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 10 - 386
Target Start/End: Original strand, 3059966 - 3060344
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| ||   | ||||||||||| |||||||||||| ||||||     
T  3059966 catcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagtcataacatcaattgaacaagaatcataactcaatc 3060065  T
Q  110 caactacaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
     ||| ||||| |  |||| |||| |||||||  || |||||||| || || |||||| ||||||||| |||||| ||| | ||||||| |  |||| |||    
T  3060066 taacaacaacttaacaaaattca-ccatttgagcataattttcacaatttatcatttttacatatttgaacatgtaatttcaccaacagtattacaatta 3060164  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaa 306  Q
    | ||||||| ||||||||||| |||| |||| |||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||    
T  3060165 tcatcaattaatgcatacaaatatattatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatataacatttgaaaatttacaaa 3060264  T
Q  307 atgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 386  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||| |||||||    
T  3060265 atgatgatgattatgataaagacttacccccttaccttcattatctccaactattagctctagcttcacttttgctccta 3060344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 12 - 345
Target Start/End: Original strand, 16211768 - 16212103
Alignment:
Q  12 tcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattca 111  Q
    |||| ||| |||||||||| |||||||| | |||| |||||||| |||||||| |||| || | | ||||||||||  |||||||||| | ||||| | |    
T  16211768 tcattaattcatgaatatgcatacccaagcaatgaatcatcaaccacaacatcaattaacaaccataacatcaatttaacaagaatcaaatctcaaatta 16211867  T
Q  112 actacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttatta 209  Q
    || ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | || ||||||| |||| |||| |    
T  16211868 acaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgcaatttcacaaacaatcttacaattatca 16211967  T
Q  210 tcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatg 309  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||| || ||||||||    
T  16211968 tcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattgtccataagcaaaattcatacaacatttgaaatttcacaaaatg 16212067  T
Q  310 atgatgattatgataaagactaacccccttacctta 345  Q
    ||||||||||||||||||||||||||||||||||||    
T  16212068 atgatgattatgataaagactaacccccttacctta 16212103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 15 - 345
Target Start/End: Complemental strand, 11580997 - 11580661
Alignment:
Q  15 tcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaact 114  Q
    ||||| ||||||||||||||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| ||||||  |||     
T  11580997 tcaattcatgaatatgtatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatctaaca 11580898  T
Q  115 acaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatca 212  Q
    ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| ||||    
T  11580897 acaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatca 11580798  T
Q  213 attcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat---caaaattcatacaacatttgaaaatttac-aaaat 308  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||| ||| |||||| ||    |||||||||||||||||||||||||||| |||||    
T  11580797 attcatgcatacaaacatattatcacagttggagcacgaatttagcaataattatccattatgcaaaaaattcatacaacatttgaaaatttacaaaaat 11580698  T
Q  309 gatgatgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||| ||||||||||||    
T  11580697 gatgatgattatgataaagactaatccccttacctta 11580661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 10 - 345
Target Start/End: Complemental strand, 13037277 - 13036938
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| ||||  ||  | ||||| ||||| |||||||||||| ||||||     
T  13037277 catcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatattcataacattaattgaacaagaatcataactcaatc 13037178  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | | ||||||||||||| ||||    
T  13037177 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgcaatttcatcaacaatcatacaattat 13037078  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaa 305  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||   ||||||||||||||||||||||||||||||    
T  13037077 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaa 13036978  T
Q  306 aatgatgatgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||| | |||||||||||||||||||||    
T  13036977 aatgatgatgattatggtgaagactaacccccttacctta 13036938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 10 - 345
Target Start/End: Original strand, 36052667 - 36053003
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| | || |||||||||| |||||||| |||| || | ||||||||||||| |||||||||| | ||||| |    
T  36052667 catcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaaccacaacatcaattgaacaagaatcaaatctcaaat 36052766  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     |||   ||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||| | ||||    
T  36052767 taac---aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaattttaccaacaatcatataattat 36052863  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaa 305  Q
     |||||||||||||||||||| |||||||| |||||||| |  |||||||||||||| |||||| ||   |||||||||||||||||||||| || ||||    
T  36052864 catcaattcatgcatacaaacgtatcatcacagttggagtataaatttagcaacaattatccattatacaaaaattcatacaacatttgaaatttcacaa 36052963  T
Q  306 aatgatgatgattatgataaagactaacccccttacctta 345  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  36052964 aatgatgatgattatgataaagactaacccccttacctta 36053003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 106 - 271
Target Start/End: Original strand, 11516324 - 11516490
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  11516324 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 11516423  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11516424 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 11516490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 106 - 271
Target Start/End: Complemental strand, 15441730 - 15441564
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  15441730 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 15441631  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15441630 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 15441564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 106 - 271
Target Start/End: Complemental strand, 30262295 - 30262129
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  30262295 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 30262196  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  30262195 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 30262129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 10 - 271
Target Start/End: Complemental strand, 47481294 - 47481031
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| | ||||||||||||| | |||||| ||||  | | | ||||||||||| |||||||||||| |||||||    
T  47481294 catcatcaattcatgaatatgcatacccaagcaatgattcatcaacaaaaacatcaattaagagcgataacatcaattgaacaagaatcataactcaatt 47481195  T
Q  110 caactacaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
    |||| ||||| |  |||| |||| ||| |||  ||||||||||| ||||| |||||| ||||||||| |||||| ||| | || |||||||||||| |||    
T  47481194 caacaacaacttagcaaaattca-ccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaatta 47481096  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
    | ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||| ||||||    
T  47481095 tcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatccat 47481031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 10 - 264
Target Start/End: Complemental strand, 18254098 - 18253842
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| |||| ||  | || |||||||||  |||||||| |||| |||| | ||||||||||| |||||||||| | ||||| |    
T  18254098 catcatcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaat 18253999  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| ||||    
T  18253998 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattat 18253899  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 264  Q
     ||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  18253898 catcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaat 18253842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 10 - 270
Target Start/End: Original strand, 13321014 - 13321278
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| ||||||| || | ||||||   ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| |||||||    
T  13321014 catcatcaattcatgaatgtgcaaacccaagtcatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaatt 13321113  T
Q  110 caacta-caacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatattt--aaacatggaatctaaccaacaatcatacact 204  Q
    |||| | |||| |  |||| |||| | |||  ||||||||| ||||||||  ||||| |||||| ||  ||||||| ||| | ||||||||||||||| |    
T  13321114 caacaatcaacttagcaaaattcaccaattgagcacaattt-cataacttgacatttatacatactttgaaacatgtaatttcaccaacaatcatacaat 13321212  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca 270  Q
    ||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||| |||||    
T  13321213 tatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatcca 13321278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 10 - 253
Target Start/End: Complemental strand, 16479213 - 16478968
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| |||||||| |  |||||||||||| |||||||| | || || ||| |||||||||||  ||||||||| | ||||| |    
T  16479213 catcatcaatccatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaaat 16479114  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||  | ||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| ||||    
T  16479113 taaaaataacttaacaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattat 16479014  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaat 253  Q
     ||||||||||||||||||||||| ||||  |||  ||||||||||    
T  16479013 catcaattcatgcatacaaacataacatcgcagtaagagcacgaat 16478968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 139 - 271
Target Start/End: Complemental strand, 25292470 - 25292338
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||| ||| || ||| |||||||||||||||| ||| | ||||||||||||||| | || | |||||||| |||||||||||||||||||    
T  25292470 gcacaatattcatagcttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatacatacaaacatatcatcaa 25292371  T
Q  239 agttggagcacgaatttagcaacaatcatccat 271  Q
    ||||||||||| |||||||||||||| ||||||    
T  25292370 agttggagcacaaatttagcaacaattatccat 25292338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 313 - 393
Target Start/End: Complemental strand, 32493978 - 32493898
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  32493978 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 32493898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 313 - 393
Target Start/End: Original strand, 126738 - 126818
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| ||| ||||||||| ||||    
T  126738 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctaacttcatttttgctcctatgattct 126818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 139 - 255
Target Start/End: Original strand, 13572808 - 13572924
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||||||| |||||| |||||||||||||||| ||| | ||||||||||| ||| | || ||||||||||||||||||||||| |||||     
T  13572808 gcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcacacaatcatcatcaattcatgcatacaaacataacatcac 13572907  T
Q  239 agttggagcacgaattt 255  Q
    ||   ||||||||||||    
T  13572908 agcaagagcacgaattt 13572924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 313 - 393
Target Start/End: Complemental strand, 1936949 - 1936869
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||| || ||||||||||||||| ||| ||||| ||||    
T  1936949 atgattatgataaaaactaacctccttaccttaattatctccaactattaactctagcttcacttttgcttctatgattct 1936869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 143 - 343
Target Start/End: Complemental strand, 296094 - 295893
Alignment:
Q  143 aattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagtt 242  Q
    |||||| |||||||||||||| |||||| || |||||| ||| | |||||||||||||   |||| ||| ||||||||| ||||||||| || |  | ||    
T  296094 aatttttataacttctcatttttacataattcaacatgaaatttcaccaacaatcataacattatcatcgattcatgcacacaaacataacacctcaatt 295995  T
Q  243 ggagcacgaatttagcaacaatcatccataat-caaaa-ttcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctta 340  Q
     || |||||||||||||||||| || ||| || ||||| |||||||||  |||||||||  | ||||||||||  |||||| | ||||| ||||||||||    
T  295994 agaacacgaatttagcaacaattattcattatgcaaaatttcatacaaagtttgaaaatgca-aaaatgatgagaattatgttgaagacaaaccccctta 295896  T
Q  341 cct 343  Q
    |||    
T  295895 cct 295893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 313 - 393
Target Start/End: Complemental strand, 111201 - 111121
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||  |||||| ||||||||||| ||||||||| ||||    
T  111201 atgattatgatgaaaactaacccccttaccttaattatcaccaacttttagctcaagcttcacttttgctcctatgattct 111121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 139 - 259
Target Start/End: Original strand, 10989541 - 10989661
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  10989541 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 10989640  T
Q  239 agttggagcacgaatttagca 259  Q
    ||   ||||||||||||||||    
T  10989641 agcaagagcacgaatttagca 10989661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 2437590 - 2437710
Alignment:
Q  140 cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaa 239  Q
    |||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| ||||| |    
T  2437590 cacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcaca 2437689  T
Q  240 gttggagcacgaatttagcaa 260  Q
        |||||||||||||||||    
T  2437690 acaagagcacgaatttagcaa 2437710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 279 - 386
Target Start/End: Original strand, 13377819 - 13377924
Alignment:
Q  279 attcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 378  Q
    |||||||||||| |||||||||||||  |  |  ||||||||||| ||  ||||||||||||||||||||||| |||| | ||||| | |||||||||||    
T  13377819 attcatacaacaattgaaaatttacactaaaa--atgattatgatgaattctaacccccttaccttaattatcaccaattcctagcccaagcttcacttt 13377916  T
Q  379 agctccta 386  Q
    ||||||||    
T  13377917 agctccta 13377924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 147 - 259
Target Start/End: Complemental strand, 13911136 - 13911024
Alignment:
Q  147 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 246  Q
    |||||||||| |||||| | ||||| | |||||| ||| | ||||||||||||||| |||  ||||||||||||||||||||||| ||||| |    |||    
T  13911136 ttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaattaacatcaattcatgcatacaaacataacatcacaacaagag 13911037  T
Q  247 cacgaatttagca 259  Q
    |||||||||||||    
T  13911036 cacgaatttagca 13911024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 314 - 393
Target Start/End: Complemental strand, 7283987 - 7283908
Alignment:
Q  314 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    |||||||||| || |||||||||||||||||||||||| |||| || || ||| ||||||||||| ||||||||| ||||    
T  7283987 tgattatgatgaaaactaacccccttaccttaattatcaccaattattaactcaagcttcacttttgctcctatgattct 7283908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 229 - 271
Target Start/End: Complemental strand, 14114031 - 14113989
Alignment:
Q  229 atatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  14114031 atatcatcaaagttggagcacgaatttagcaacaattatccat 14113989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 229 - 271
Target Start/End: Complemental strand, 14423681 - 14423639
Alignment:
Q  229 atatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  14423681 atatcatcaaagttggagcacgaatttagcaacaattatccat 14423639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 329 - 386
Target Start/End: Original strand, 13389693 - 13389750
Alignment:
Q  329 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 386  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  13389693 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 13389750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 345
Target Start/End: Original strand, 36024372 - 36024485
Alignment:
Q  239 agttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaa 332  Q
    ||||||||||||||||||| |||||| |||||  ||   ||||||||||| ||||||||||| ||  |||    ||||||||||||||||| ||||||||    
T  36024372 agttggagcacgaatttagaaacaattatccaattatgaaaaattcataccacatttgaaaaattgtaaaaatgatgatgatgattatgatgaagactaa 36024471  T
Q  333 -cccccttacctta 345  Q
     |||||||||||||    
T  36024472 ccccccttacctta 36024485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 2029244 - 2029276
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  2029244 atgattatgataaagactaacccccttacctta 2029276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 7293333 - 7293365
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  7293333 atgattatgataaagactaacccccttacctta 7293365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 11516544 - 11516576
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  11516544 atgattatgataaagactaacccccttacctta 11516576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 14113935 - 14113903
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  14113935 atgattatgataaagactaacccccttacctta 14113903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 15441510 - 15441478
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  15441510 atgattatgataaagactaacccccttacctta 15441478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 15709428 - 15709501
Alignment:
Q  276 aaaattcatacaacatttgaaaatttacaaaat----gatgatgattatgataaagactaacccccttacctta 345  Q
    ||||||||||| ||||||||||| || ||||||    ||||||||||||||| |||||||| || |||||||||    
T  15709428 aaaattcataccacatttgaaaaattgcaaaattgatgatgatgattatgatgaagactaatcctcttacctta 15709501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 386
Target Start/End: Original strand, 16919870 - 16919926
Alignment:
Q  330 taacccccttaccttaattatctccaactactagctctagcttcactttagctccta 386  Q
    ||||||||||| |||||||||| |||| | ||||| | |||||||||||||||||||    
T  16919870 taacccccttatcttaattatcaccaattcctagcccaagcttcactttagctccta 16919926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 30262075 - 30262043
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  30262075 atgattatgataaagactaacccccttacctta 30262043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 42056220 - 42056188
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  42056220 atgattatgataaagactaacccccttacctta 42056188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 371417 - 371449
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||||||| |||||||||||||||||||||    
T  371417 atgattatgatgaagactaacccccttacctta 371449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 3049905 - 3049937
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||| ||||||||||||||||||    
T  3049905 atgattatgataaaaactaacccccttacctta 3049937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 13321334 - 13321366
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||||||| |||||||||||||||||||||    
T  13321334 atgattatgatgaagactaacccccttacctta 13321366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 341
Target Start/End: Complemental strand, 15516793 - 15516765
Alignment:
Q  313 atgattatgataaagactaacccccttac 341  Q
    |||||||||||||||||||||||||||||    
T  15516793 atgattatgataaagactaacccccttac 15516765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 25124450 - 25124482
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||||||| |||||||||||||||||||||    
T  25124450 atgattatgatgaagactaacccccttacctta 25124482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 47480976 - 47480944
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||||||| |||||||||||||||||||||    
T  47480976 atgattatgatgaagactaacccccttacctta 47480944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 189; Significance: 1e-102; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 10 - 393
Target Start/End: Complemental strand, 19794967 - 19794581
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| |||||||| | ||||||||||||||| |||||| |||| |   || ||||||||||| |||||||||||| |||||||    
T  19794967 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactataacatcaattaacggaaataacatcaattgaacaagaatcataactcaatt 19794868  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
    |||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| ||||    
T  19794867 caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattat 19794768  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaa 305  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| | ||||| |||||| ||   ||||||||||||||||||| ||||||||||    
T  19794767 tatcaattcatgcatacaaacatatcatcacagttggagcacgaatttaacgacaattatccattatgcaaaaattcatacaacatttg-aaatttacaa 19794669  T
Q  306 aatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    ||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||| ||||    
T  19794668 aataatgatgattatgatgaagactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcttatgattct 19794581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 10 - 345
Target Start/End: Complemental strand, 36982704 - 36982364
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||||| ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| |||||||    
T  36982704 catcatcaattcatgaatatgcatacccaaacaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacaggaatcataactcaatt 36982605  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
    |||| ||||| || |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||| ||||| |||| ||||    
T  36982604 caacaacaacttggcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccagcaatcttacaattat 36982505  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttac-a 304  Q
     ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||||| |    
T  36982504 catcaattcatgaatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaa 36982405  T
Q  305 aaatgatgatgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  36982404 aaatgatgatgattatgataaagactaacccccttacctta 36982364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 10 - 393
Target Start/End: Complemental strand, 43643220 - 43642833
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| |  ||||||||||||||||||||| |||| || ||| | ||||||||| |||||||||||| ||||| |    
T  43643220 catcatcaattcatgaatatgcatacccaagcagtgattcatcaactacaacatcaattaacagcaatagcatcaattgaacaagaatcatatctcaaat 43643121  T
Q  110 caactacaac-atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||  ||||| | |  ||||||| | |||  |||||||||||| |||||  ||||| | | ||||| |||||| ||| | ||||||||||||||| ||||    
T  43643120 taataacaactaagaaaaattcaccaattgagcacaattttcacaacttaacatttgttcctatttgaacatgtaatttcaccaacaatcatacaattat 43643021  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaa 305  Q
     ||||||||||||||||||||||||||||| | ||||||||| |||||||||||||| |||||  ||   ||||||||||||||||||||||||| ||||    
T  43643020 catcaattcatgcatacaaacatatcatcacaattggagcacaaatttagcaacaattatccactatgcaaaaattcatacaacatttgaaaattcacaa 43642921  T
Q  306 aatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  43642920 aatgatgatgattatgataaagactaacctccttcccttaattatctccaactattagctctagcttcacttttgctcctatgattct 43642833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 10 - 393
Target Start/End: Complemental strand, 20627576 - 20627190
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||| ||||| |||||||||  |||||||| | ||||||||||||| |||||| | |||| || | | || |||||||| |||||||| | | ||||| |    
T  20627576 catcctcaattcatgaatatccatacccaagcaatgattcatcaaccacaacaccaattaacaaccataaaatcaattgaacaagaattaaatctcaaat 20627477  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| || || |||||| |||||||||  ||||| ||| | ||||||||||||||| ||||    
T  20627476 taacaacaacttaacaaaattcaccaattgagcacaattttcacaagttatcatttttacatatttggacatgtaatttcaccaacaatcatacaattat 20627377  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaa-tttacaaa 306  Q
     |||||||| |||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||| ||||||||||| ||||||||| ||||||||    
T  20627376 catcaattcgtgcatacaaacatatcatcacagttggagcacgaatttaacaacaattatccataatcataattcatacaatatttgaaaattttacaaa 20627277  T
Q  307 atgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  20627276 atgatgatgattatgataaagactaaccccgttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 20627190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 15 - 345
Target Start/End: Original strand, 462743 - 463075
Alignment:
Q  15 tcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaact 114  Q
    ||||| |||||||||| |||||||| | ||||||||||||  || ||||| |||| || | | ||||||||||| |||||||||||| ||||||  |||     
T  462743 tcaattcatgaatatgcatacccaagcaatgattcatcaatcacgacatcaattaacagccataacatcaattgaacaagaatcataactcaatctaaca 462842  T
Q  115 acaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc 211  Q
    ||||| |  |||| |||| ||| |||  ||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| |||    
T  462843 acaacttagcaaaattca-ccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatc 462941  T
Q  212 aattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgat 311  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  462942 aattcatgcatacaaatatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgat 463041  T
Q  312 gatgattatgataaagactaacccccttacctta 345  Q
    ||||||||||||||||||||||||||||||||||    
T  463042 gatgattatgataaagactaacccccttacctta 463075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 10 - 345
Target Start/End: Original strand, 8891242 - 8891581
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| ||||  | | | ||||||||||| |||||||||||| ||||||     
T  8891242 catcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatagccataacatcaattgaacaagaatcataactcaatc 8891341  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| |  |||||||||||||| ||||    
T  8891342 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcgccaacaatcatacaattat 8891441  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaa 305  Q
     |||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||| ||   ||||||||||||||||||||||||||||||    
T  8891442 catcaattcatgcatacaaacatattatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaa 8891541  T
Q  306 aatgatgatgattatgataaagactaacccccttacctta 345  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  8891542 aatgatgatgattatgataaagactaacccctttacctta 8891581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 10 - 345
Target Start/End: Complemental strand, 24341652 - 24341309
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| ||||||||||||||||||| | |||||||||||||   |||||| |||| || ||| ||||||||||| ||| |||||||| |||||||    
T  24341652 catcatcaattcatgaatatgtatacccaagcaatgattcatcaacaggaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaatt 24341553  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
    |||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||  ||| | ||||||||||||||| ||||    
T  24341552 caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatataatttcaccaacaatcatacaattat 24341453  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaa 305  Q
     ||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || |||    
T  24341452 catcaattcatgcatacaaacatatcatcacagttgaagcatgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaa 24341353  T
Q  306 a----atgatgatgattatgataaagactaacccccttacctta 345  Q
    |    ||||||||||||||||| |||||||||||||||||||||    
T  24341352 aaatgatgatgatgattatgatgaagactaacccccttacctta 24341309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 106 - 271
Target Start/End: Complemental strand, 19689567 - 19689401
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  19689567 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 19689468  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19689467 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 19689401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 106 - 271
Target Start/End: Original strand, 23820168 - 23820334
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  23820168 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 23820267  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23820268 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 23820334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 106 - 271
Target Start/End: Complemental strand, 14906606 - 14906440
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  14906606 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 14906507  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14906506 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 14906440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 106 - 271
Target Start/End: Original strand, 20015108 - 20015274
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||| ||| |    
T  20015108 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcacacaat 20015207  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20015208 tattatcaattcatgcatgcaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 20015274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 10 - 271
Target Start/End: Complemental strand, 25265653 - 25265390
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| | ||||||||| ||| |||||||| |||| || ||||||||||||||| ||| |  ||  | |  ||||    
T  25265653 catcatcaattcatgaatatgcatacccaagccatgattcataaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataatt 25265554  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
    |||| |||||||  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| ||||    
T  25265553 caacaacaacatagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattat 25265454  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
     ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||    
T  25265453 catcaattcatgcatacaaacataacatcaaagttagagcacgaatttagcaacaattatccat 25265390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 139 - 271
Target Start/End: Complemental strand, 17396784 - 17396653
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||||||| |||||| ||| |||||||||||| ||| | ||||||||||||||| | || | |||||||||||||| |||||||||||||    
T  17396784 gcacaatattcataacttatcatttttacttatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaa 17396686  T
Q  239 agttggagcacgaatttagcaacaatcatccat 271  Q
    |||||||||||||||||||||||||| ||||||    
T  17396685 agttggagcacgaatttagcaacaattatccat 17396653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 249 - 345
Target Start/End: Original strand, 22863169 - 22863267
Alignment:
Q  249 cgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||| |||||| ||   ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22863169 cgaatttagcaacaattatccattatgcaaaaattcatacaacaattgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 22863267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 10 - 221
Target Start/End: Complemental strand, 7508107 - 7507894
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgca-caagaatcatagctcaat 108  Q
    ||||||||||||||||||||| |||||||| |  |||||||||||| |||||||| | || || ||| ||||||||||  | || |||||||| ||||||    
T  7508107 catcatcaatccatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattaaaacatgaatcatatctcaat 7508008  T
Q  109 tcaactacaacat-gtcaaattcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 205  Q
    | ||| ||||| | | |||||||| ||| |||  ||||||||||||||||| | |||| ||||||||| |||||| ||| | ||||||||||||||| ||    
T  7508007 t-aacaacaacttagccaaattca-ccaattgaacacaattttcataacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaatt 7507910  T
Q  206 attatcaattcatgca 221  Q
    || |||||||||||||    
T  7507909 atcatcaattcatgca 7507894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 313 - 393
Target Start/End: Original strand, 22275045 - 22275125
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  22275045 atgattatgataaaggctaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 22275125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 313 - 393
Target Start/End: Original strand, 22284278 - 22284358
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||    
T  22284278 atgattatgataaagactaacccccttaccttaattatctccaactattagctctaacttcacttttgctcctatgattct 22284358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 314 - 393
Target Start/End: Original strand, 15633538 - 15633617
Alignment:
Q  314 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||| ||||||||| ||||    
T  15633538 tgattatgataaagactaacctccttaccttaattatctccaactattaactctagcttcacttttgctcctatgattct 15633617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 259
Target Start/End: Complemental strand, 19886913 - 19886661
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| |||||||||| | ||||| |    
T  19886913 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 19886814  T
Q  110 caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
     ||| ||||| |  |  ||||||| |  ||| ||||||| |||||||||| ||| || | ||||| | |||||| ||| | ||||||||| |||||  ||    
T  19886813 taacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaacta 19886714  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 259  Q
      ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  19886713 acatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 19886661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 329 - 386
Target Start/End: Original strand, 43646232 - 43646289
Alignment:
Q  329 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 386  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  43646232 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 43646289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 346
Target Start/End: Complemental strand, 19689347 - 19689314
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaa 346  Q
    ||||||||||||||||||||||||||||||||||    
T  19689347 atgattatgataaagactaacccccttaccttaa 19689314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 9652828 - 9652796
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  9652828 atgattatgataaagactaacccccttacctta 9652796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 14906386 - 14906354
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  14906386 atgattatgataaagactaacccccttacctta 14906354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 19660221 - 19660273
Alignment:
Q  334 ccccttaccttaattatctccaactactagctctagcttcactttagctccta 386  Q
    |||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  19660221 ccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 19660273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 23820388 - 23820420
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  23820388 atgattatgataaagactaacccccttacctta 23820420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 344
Target Start/End: Original strand, 25213372 - 25213403
Alignment:
Q  313 atgattatgataaagactaacccccttacctt 344  Q
    ||||||||||||||||||||||||||||||||    
T  25213372 atgattatgataaagactaacccccttacctt 25213403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 386
Target Start/End: Original strand, 19666848 - 19666921
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 386  Q
    ||||||||||| ||  ||||||||||||||||||||| | | || | ||||| | | |||||||||||||||||    
T  19666848 atgattatgatgaattctaacccccttaccttaattagcacaaattcctagcccaaacttcactttagctccta 19666921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 386
Target Start/End: Original strand, 25305769 - 25305826
Alignment:
Q  329 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 386  Q
    ||||||||||||||||||||||| |||| |  |||| | |||||||||||| ||||||    
T  25305769 ctaacccccttaccttaattatcaccaattcatagcccaagcttcactttaactccta 25305826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 386
Target Start/End: Complemental strand, 31146138 - 31146032
Alignment:
Q  279 attcatacaaca-tttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactt 377  Q
    |||||||||||| |||||||||||||| ||  | |||||||||||| ||  ||||||||||||||||| |||  || |    ||||| | ||||||||||    
T  31146138 attcatacaacaatttgaaaatttacacaa--aagatgattatgatgaattctaacccccttaccttagttagatcaattctctagcccaagcttcactt 31146041  T
Q  378 tagctccta 386  Q
    |||||||||    
T  31146040 tagctccta 31146032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 7507789 - 7507757
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||||||| |||||||||||||||||||||    
T  7507789 atgattatgatgaagactaacccccttacctta 7507757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 9636761 - 9636821
Alignment:
Q  27 tatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaatt 87  Q
    |||| |||||||||| |||| |||||||| |||| |||| ||| || ||||||||||||||    
T  9636761 tatgaatacccaaactatgaatcatcaacaacaatatctcttaacaacaacaacatcaatt 9636821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 17396599 - 17396567
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||||| |||||||||||||||||||||||    
T  17396599 atgattatggtaaagactaacccccttacctta 17396567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 20015328 - 20015360
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||| |||||||||||||||||||||||||||    
T  20015328 atgatcatgataaagactaacccccttacctta 20015360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 87
Target Start/End: Original strand, 24884718 - 24884762
Alignment:
Q  43 atgattcatcaactacaacatctattagcatcaacaacatcaatt 87  Q
    |||| |||||||| |||| ||||||||||| ||||||||||||||    
T  24884718 atgaatcatcaacaacaatatctattagcaacaacaacatcaatt 24884762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 28031166 - 28031134
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||||||| |||||||||||||||||||||    
T  28031166 atgattatgatgaagactaacccccttacctta 28031134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 33128372 - 33128404
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||||||| |||||||||||||||||||||    
T  33128372 atgattatgatgaagactaacccccttacctta 33128404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 170; Significance: 4e-91; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 10 - 345
Target Start/End: Original strand, 48598 - 48935
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| ||||  | | | ||||||||||| |||||||||||| ||||||     
T  48598 catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatagccataacatcaattgaacaagaatcataactcaatc 48697  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     | | ||||| |  |||| |||| | | |  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| ||||    
T  48698 tagcaacaacttagcaaaattcaccaactgagcacaattttcacaacttatcattttttcctatttgaacatgtaatttcaccaacaatcatacaattat 48797  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 307  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  48798 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaa 48897  T
Q  308 tgatgatgattatgataaagactaacccccttacctta 345  Q
    ||||||||||||||||||||||||||||||||||||||    
T  48898 tgatgatgattatgataaagactaacccccttacctta 48935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 36225 - 36323
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 237  Q
    ||||||| |||||||||| |||||| | ||||| | || ||| ||| | |||||||||||||||  ||  |||||||||| |||||||||||| |||||    
T  36225 gcacaatcttcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatacatacaaacataacatca 36323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 61154 - 61122
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||||||| |||||||||||||||||||||    
T  61154 atgattatgatgaagactaacccccttacctta 61122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 167; Significance: 2e-89; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 10 - 345
Target Start/End: Original strand, 1124 - 1462
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| | |||||| | || |||||||||| |||| ||| |||| || | | ||||||||||| |||||||||| | ||||| |    
T  1124 catcatcaattcatgaatatgcacacccaagcaattattcatcaaccacaatatcaattaacaaccataacatcaattgaacaagaatcaaatctcaaat 1223  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| ||||    
T  1224 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattat 1323  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaa 306  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| |||||    
T  1324 tatcaattcatgcatactaacatatcatcaaagttggagcacgaatttagcaacaattatccataagaaaaattcatacaacatttgaaaatttcacaaa 1423  T
Q  307 atgatgatgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1424 atgatgatgattatgataaagactaacccccttacctta 1462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 12 - 345
Target Start/End: Complemental strand, 3843 - 3508
Alignment:
Q  12 tcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattca 111  Q
    |||||||||||| |||||| |||||||| | || |||| ||||  |||||||| |||| |||| | ||||||||||| |||||||||| | ||||| | |    
T  3843 tcatcaatccatcaatatgcatacccaagcaattattcctcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaatta 3744  T
Q  112 actacaacatgtcaaattcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttatta 209  Q
    || ||||| |  |||| |   ||| |||  ||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |    
T  3743 acaacaacttagcaaaatttaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatca 3644  T
Q  210 tcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatg 309  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||    
T  3643 tcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatctataatcaaaattcatacaacttttgaaaatttacaaaatg 3544  T
Q  310 atgatgattatgataaagactaacccccttacctta 345  Q
    | ||||||||||| ||||||||||||||||||||||    
T  3543 aagatgattatgacaaagactaacccccttacctta 3508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 163; Significance: 6e-87; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 10 - 342
Target Start/End: Original strand, 19206 - 19543
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| |||||||    
T  19206 catcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacaggaatcataactcaatt 19305  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
    |||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| ||||    
T  19306 caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattat 19405  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttac-a 304  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||||| |    
T  19406 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaa 19505  T
Q  305 aaatgatgatgattatgataaagactaacccccttacc 342  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  19506 aaattatgatgattatgatgaagactaacccccttacc 19543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 10 - 271
Target Start/End: Original strand, 21290 - 21553
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| |||||||    
T  21290 catcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacaggaatcataactcaatt 21389  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
    |||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| ||||    
T  21390 caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattat 21489  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  21490 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccat 21553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 163; Significance: 6e-87; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 21 - 345
Target Start/End: Original strand, 171916 - 172242
Alignment:
Q  21 catgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 120  Q
    |||||||||| ||||| || | ||||||||||||| |||||||| |||| || | | ||||||||||| ||||||||| || ||||||||||| |||||     
T  171916 catgaatatgcatacctaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcgtaactcaattcaaccacaact 172015  T
Q  121 tgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 218  Q
    |  |||| |||| | |||| |||||||||||| ||||| |||||| | | ||||| |||||| ||| | |||| |||||||||| |||| ||||||||||    
T  172016 tagcaaaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcat 172115  T
Q  219 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgatt 318  Q
     |||||||||||||||||| |||||||||||| ||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  172116 ccatacaaacatatcatcacagttggagcacgtatttagcaacagttatccataatcaaaatttatacaacatttgaaaatttacaaaatgatgatgatt 172215  T
Q  319 atgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||    
T  172216 atgataaagactaacccccttacctta 172242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 21 - 345
Target Start/End: Original strand, 177619 - 177945
Alignment:
Q  21 catgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 120  Q
    |||||||||| ||||| || | ||||||||||||| |||||||| |||| || | | ||||||||||| ||||||||| || ||||||||||| |||||     
T  177619 catgaatatgcatacctaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcgtaactcaattcaaccacaact 177718  T
Q  121 tgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 218  Q
    |  |||| |||| | |||| |||||||||||| ||||| |||||| | | ||||| |||||| ||| | |||| |||||||||| |||| ||||||||||    
T  177719 tagcaaaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcat 177818  T
Q  219 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgatt 318  Q
     |||||||||||||||||| |||||||||||| ||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  177819 ccatacaaacatatcatcacagttggagcacgtatttagcaacagttatccataatcaaaatttatacaacatttgaaaatttacaaaatgatgatgatt 177918  T
Q  319 atgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||    
T  177919 atgataaagactaacccccttacctta 177945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 158; Significance: 6e-84; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 10 - 346
Target Start/End: Complemental strand, 37176 - 36836
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | ||| ||||||| |||||| ||||| ||||||     
T  37176 catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacgtcaattgaacaagattcataactcaatc 37077  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
    |||| ||||| |  |||| |||| | |||| |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||| | |||| ||||    
T  37076 caaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaagcttacaattat 36977  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaa 305  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||| ||   |||||||||||||||||||||| || ||||    
T  36976 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaatttcacaa 36877  T
Q  306 aatgatgatgattatgataaagactaacccccttaccttaa 346  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  36876 aatgatgatgattatgataaagactaacccccttaccttaa 36836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 393
Target Start/End: Complemental strand, 15398 - 15319
Alignment:
Q  314 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    |||||||||| ||  ||||||||||||||||||||||||||||||| |||| | ||||||||||| ||||||||| ||||    
T  15398 tgattatgatgaatgctaacccccttaccttaattatctccaactattagcccaagcttcacttttgctcctatgattct 15319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 158; Significance: 6e-84; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 10 - 345
Target Start/End: Original strand, 23506965 - 23507302
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| | || |||||||||| |||||||| |||| || | | ||||||||||| |||||||||| | ||||| |    
T  23506965 catcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcaaatctcaaat 23507064  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| ||||    
T  23507065 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattat 23507164  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 307  Q
     ||||||||||||||||||||||||||||| |  ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||  ||||||||    
T  23507165 catcaattcatgcatacaaacatatcatcacaaatggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaatcttacaaaa 23507264  T
Q  308 tgatgatgattatgataaagactaacccccttacctta 345  Q
    ||  ||||||||||||||||||||||||||||||||||    
T  23507265 tggagatgattatgataaagactaacccccttacctta 23507302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 10 - 345
Target Start/End: Complemental strand, 27182810 - 27182471
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||| ||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| ||||||     
T  27182810 catcatcaattcatgaatatgcatactcaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatc 27182711  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | | ||||||||||||| ||||    
T  27182710 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcatcaacaatcatacaattat 27182611  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaa 305  Q
     |||| |||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||| ||   ||||||||||||||||||||||||||||||    
T  27182610 catcagttcatgcatacaaacatatcatcacagttggagcatgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaa 27182511  T
Q  306 aatgatgatgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  27182510 aatgatgatgattatgatgaagactaacccccttacctta 27182471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 10 - 345
Target Start/End: Complemental strand, 18531330 - 18530988
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| ||||||||||||||||| | | ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| |||||||    
T  18531330 catcatcaattcatgaatatgtatacccgagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacatgaatcatatctcaatt 18531231  T
Q  110 caactacaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
    |||| ||||| |  |||| |||| ||| |||  ||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||    
T  18531230 caacaacaacttagcaaaattca-ccaattgaacacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaatta 18531132  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcc-ataatcaaa-attcatacaacatttgaaaatttaca 304  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| || || ||| |||||||| ||||||||||| || ||    
T  18531131 tcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaacattcataccacatttgaaaaattgca 18531032  T
Q  305 aaatgatgat---gattatgataaagactaacccccttacctta 345  Q
    ||||||||||   ||||||||| |||||||||||||||||||||    
T  18531031 aaatgatgatgacgattatgatgaagactaacccccttacctta 18530988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 10 - 345
Target Start/End: Complemental strand, 22054096 - 22053753
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||||| |||||| | ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| |||||||    
T  22054096 catcatcaattcatgaatatgtagacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacatgaatcatatctcaatt 22053997  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
    |||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | |||||||||||||||  |||    
T  22053996 caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaactat 22053897  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaa 305  Q
     |||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || |||    
T  22053896 catcaattcatacatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaatttcaa 22053797  T
Q  306 a----atgatgatgattatgataaagactaacccccttacctta 345  Q
    |    ||||||||||||||||| |||||||||||||||||||||    
T  22053796 aaatgatgatgatgattatgatgaagactaacccccttacctta 22053753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 106 - 271
Target Start/End: Original strand, 20623066 - 20623232
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  20623066 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 20623165  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20623166 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 20623232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 106 - 271
Target Start/End: Complemental strand, 21233694 - 21233528
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  21233694 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 21233595  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21233594 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 21233528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 109 - 271
Target Start/End: Original strand, 37052844 - 37053007
Alignment:
Q  109 tcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||| ||||||| ||| ||||||||||||||||| ||||    
T  37052844 tcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcatttccacatattcaaacatgtaatttaaccaacaatcatacaattat 37052943  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37052944 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 37053007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 106 - 271
Target Start/End: Original strand, 16536294 - 16536460
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  16536294 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 16536393  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16536394 tattataaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 16536460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 106 - 269
Target Start/End: Complemental strand, 25900571 - 25900408
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||| ||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||  ||| ||||||||||||||||| |    
T  25900571 aattcaacaacaacatgtcaa-ttcatccattttgcacaattttcataacttttcattttcacatattcaaacatataatttaaccaacaatcatacaat 25900473  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcc 269  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25900472 tatcatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatcc 25900408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 21 - 271
Target Start/End: Original strand, 34939289 - 34939540
Alignment:
Q  21 catgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 120  Q
    |||||||||| |||||||| |  |||||||||||| |||||||| |||| || ||| |||||||| || |||||||||||| ||||||||| | |  ||     
T  34939289 catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacagcaataacatcaactgaacaagaatcataactcaattca-caatgact 34939387  T
Q  121 tgtcaaattc-atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 218  Q
    |  |||| || ||| |||  ||||||||||||||||||| ||||| |||||| || ||||||  || | ||||||||||||||| |||| ||||||||||    
T  34939388 tagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcat 34939487  T
Q  219 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
    ||||||||||||| ||||| |||| ||||||||||||||||||| | ||||||    
T  34939488 gcatacaaacataacatcacagttagagcacgaatttagcaacagttatccat 34939540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 139 - 259
Target Start/End: Complemental strand, 29188404 - 29188284
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||     
T  29188404 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 29188305  T
Q  239 agttggagcacgaatttagca 259  Q
    |||  |||||||||| |||||    
T  29188304 agtaagagcacgaatctagca 29188284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 255
Target Start/End: Original strand, 27009975 - 27010089
Alignment:
Q  141 acaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaag 240  Q
    ||||| |||||||||| |||||| |||||||||||||||| ||| | ||||||| ||||||| | || ||||||||||||||||||||||| ||||| ||    
T  27009975 acaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacactcatacaatcatcatcaattcatgcatacaaacataacatcacag 27010074  T
Q  241 ttggagcacgaattt 255  Q
       ||||||||||||    
T  27010075 caagagcacgaattt 27010089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 10 - 259
Target Start/End: Complemental strand, 4200237 - 4199985
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||| ||||||||||| | |||||| | || |||||||||  | || ||| | || |||  | ||||||||||| ||| |||||| | ||||| |    
T  4200237 catcatcaacccatgaatatgcaaacccaagcaatcattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 4200138  T
Q  110 caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
    |||| |||||||  |  ||||||| | |||| ||| ||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||    
T  4200137 caacaacaacataagagaaattcaccaatttagcataatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaacta 4200038  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 259  Q
      ||||||||||||||||||||||| ||||| |    ||||||||||||||||    
T  4200037 acatcaattcatgcatacaaacataacatcacaacaagagcacgaatttagca 4199985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 10 - 259
Target Start/End: Complemental strand, 22366733 - 22366481
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| ||||| |||| | ||||| |    
T  22366733 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagcatcacaactcaaat 22366634  T
Q  110 caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
     ||| ||||| |  |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||    
T  22366633 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta 22366534  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 259  Q
      ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  22366533 acatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 22366481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 10 - 259
Target Start/End: Original strand, 25426628 - 25426880
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| |||||||||| | ||||| |    
T  25426628 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 25426727  T
Q  110 caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
     ||| ||||| |  |  ||||||| |  ||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||    
T  25426728 taacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta 25426827  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 259  Q
      ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  25426828 acatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 25426880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 10 - 256
Target Start/End: Complemental strand, 18778244 - 18777995
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | ||  ||  | ||||||| ||| |||||||||| | ||||| |    
T  18778244 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataatattcataacatcatttgaacaagaatcacaactcaaat 18778145  T
Q  110 caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
     ||| ||||| |  |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||    
T  18778144 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta 18778045  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaattta 256  Q
      ||||||||||||||||||||||| ||||| ||   |||||||||||||    
T  18778044 acatcaattcatgcatacaaacataacatcacagcaagagcacgaattta 18777995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 259
Target Start/End: Original strand, 12374 - 12626
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| |||||||||| | ||||| |    
T  12374 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 12473  T
Q  110 caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
     ||| ||||| |  |  ||||||| |  ||| ||||||| |||||||||| ||| || | ||||| | |||||| ||| | ||||||||| |||||  ||    
T  12474 taacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaacta 12573  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 259  Q
      ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  12574 acatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 12626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 139 - 256
Target Start/End: Complemental strand, 43443515 - 43443398
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  43443515 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 43443416  T
Q  239 agttggagcacgaattta 256  Q
    ||   |||||||||||||    
T  43443415 agcaagagcacgaattta 43443398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 139 - 259
Target Start/End: Original strand, 19500031 - 19500151
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||  ||||||||||||||||||||||| |||||     
T  19500031 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcac 19500130  T
Q  239 agttggagcacgaatttagca 259  Q
    ||   ||||||||||||||||    
T  19500131 agcaagagcacgaatttagca 19500151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 314 - 388
Target Start/End: Original strand, 11584374 - 11584448
Alignment:
Q  314 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 388  Q
    |||||||||| ||  ||||||||||||||||||||||| ||||||| || ||| ||||||||||| |||||||||    
T  11584374 tgattatgatgaattctaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatg 11584448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 259
Target Start/End: Complemental strand, 21073847 - 21073595
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| |||||||||| | ||||| |    
T  21073847 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattgataacatcatttgaacaagaatcacaactcaaat 21073748  T
Q  110 caactacaacatgtca--aattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
     ||| ||||| |   |  |||||| |  ||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||    
T  21073747 taacaacaacttagaagaaattcaccactttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta 21073648  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 259  Q
      ||| ||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  21073647 acatccattcatgcatacaaacataacatcacagcaagagcacgaatttagca 21073595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 386
Target Start/End: Complemental strand, 5450768 - 5450695
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 386  Q
    ||||||||||| ||  ||||||||||||||||||||||   ||| | ||||| | |||||||||||||||||||    
T  5450768 atgattatgatgaattctaacccccttaccttaattattatcaattcctagcccaagcttcactttagctccta 5450695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 329 - 386
Target Start/End: Complemental strand, 21222519 - 21222462
Alignment:
Q  329 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 386  Q
    ||||||||| ||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  21222519 ctaacccccataccttaattatcaccaattcctagcccaagcttcactttagctccta 21222462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 16105967 - 16105999
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  16105967 atgattatgataaagactaacccccttacctta 16105999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 20623286 - 20623318
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  20623286 atgattatgataaagactaacccccttacctta 20623318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 21233474 - 21233442
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  21233474 atgattatgataaagactaacccccttacctta 21233442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 23493917 - 23494029
Alignment:
Q  10 catcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 108  Q
    |||||||||  ||||||| ||| | |||||| | |||| |||||| | ||||||||  |||||| ||||||||||||||| ||| ||||| || | ||||    
T  23493917 catcatcaaatcatgaattatgaacacccaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaat 23494016  T
Q  109 tcaactacaacat 121  Q
    ||||| |||||||    
T  23494017 tcaacaacaacat 23494029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 25900352 - 25900320
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  25900352 atgattatgataaagactaacccccttacctta 25900320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 37053061 - 37053093
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  37053061 atgattatgataaagactaacccccttacctta 37053093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 21310750 - 21310709
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 255  Q
    ||||||||| |||||||||||||| |||| ||||||||||||    
T  21310750 ttcatgcattcaaacatatcatcatagttagagcacgaattt 21310709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 23981557 - 23981516
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 255  Q
    |||||||||||||||||||||||| | || ||||||||||||    
T  23981557 ttcatgcatacaaacatatcatcataattagagcacgaattt 23981516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 108760 - 108728
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||||||| |||||||||||||||||||||    
T  108760 atgattatgatgaagactaacccccttacctta 108728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 7728466 - 7728530
Alignment:
Q  57 acaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 121  Q
    ||||||||  |||||| ||||||||||||||| ||| ||||| || | ||||||||| |||||||    
T  7728466 acaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacat 7728530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 9730310 - 9730278
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||||||| |||||||||||||||||||||    
T  9730310 atgattatgatgaagactaacccccttacctta 9730278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 16536514 - 16536546
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||| ||||    
T  16536514 atgattatgataaagactaacccccttatctta 16536546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 264
Target Start/End: Original strand, 32950879 - 32950951
Alignment:
Q  192 acaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 264  Q
    ||||||||||| |||| ||||| |||| || || || ||| ||||| |||| ||||||||||||| |||||||    
T  32950879 acaatcatacaattatcatcaaatcatacacacgaaaataacatcacagttagagcacgaatttaacaacaat 32950951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 154; Significance: 1e-81; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 14 - 345
Target Start/End: Original strand, 41733 - 42066
Alignment:
Q  14 atcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac 113  Q
    |||||| |||||||||| |||||||| | ||||||||||| |||||||| | |||| || | | | ||||||||| |||||||||||| ||||||  |||    
T  41733 atcaattcatgaatatgcatacccaaccaatgattcatcatctacaacaacaattaacagccatagcatcaattgaacaagaatcataactcaatctaac 41832  T
Q  114 tacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc 211  Q
     ||||| |  |||| |||| | |||  |||||||||||| || || |||||| ||||||||| | |||| ||| | |||||||||   ||| |||| |||    
T  41833 aacaacttagcaaaattcaccaattgagcacaattttcacaaattatcatttttacatatttgagcatgtaatttcaccaacaatatgacaattatcatc 41932  T
Q  212 aattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgat 311  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  41933 aattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgat 42032  T
Q  312 gatgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||| |||||||||||||||    
T  42033 gatgattatgataaagaccaacccccttacctta 42066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 150; Significance: 3e-79; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 10 - 345
Target Start/End: Complemental strand, 1218 - 882
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| |||||||| | || |||||||||  | |||||  |||| |||| | ||||||| ||| |||||||| | | |||||||    
T  1218 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataacataaattaacatccataacatcacttgaacaagaataaaatctcaatt 1119  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||||| |||  |||||||||||| ||||| | |||| ||||||||| |||||| ||| | ||||||||||||||| ||||    
T  1118 -aacaacaacttagcaaaattcatcaattgagcacaattttcacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattat 1020  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 307  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||  |||     
T  1019 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgtaaag 920  T
Q  308 tgatgatgattatgataaagactaacccccttacctta 345  Q
    ||| ||||||||||||||||||||||||||||||||||    
T  919 tgaagatgattatgataaagactaacccccttacctta 882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 150; Significance: 3e-79; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 21 - 345
Target Start/End: Original strand, 23153458 - 23153786
Alignment:
Q  21 catgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 120  Q
    |||||||||||||||||||   ||||||||||||| |||||||| |||| || | | || |||||||| |||||||||||| ||||||  ||| |||||     
T  23153458 catgaatatgtatacccaagtaatgattcatcaaccacaacatcaattaacagccataatatcaattgaacaagaatcataactcaatctaacaacaact 23153557  T
Q  121 tgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 218  Q
    |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||    
T  23153558 tagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcat 23153657  T
Q  219 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatga 316  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||| |||||| ||   |||||||||||||||||||||||||||||||||||||||||    
T  23153658 gcatacaaacatatcatcacagttggagcacgaatttagaaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatga 23153757  T
Q  317 ttatgataaagactaacccccttacctta 345  Q
    ||||||| |||||||||||||||||||||    
T  23153758 ttatgatgaagactaacccccttacctta 23153786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 14 - 344
Target Start/End: Complemental strand, 14626377 - 14626045
Alignment:
Q  14 atcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac 113  Q
    |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | |||||||||||  ||||||||| | ||||| | |||    
T  14626377 atcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaatctcaagttaac 14626278  T
Q  114 tacaacatgtca-aattcatccatttgcaca--attttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattat 210  Q
     ||||| |  || |||||| ||| |||||||  ||||||||||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||    
T  14626277 aacaacttagcataattca-ccaattgcacacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcat 14626179  T
Q  211 caattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatga 310  Q
    ||||||||||||||||||||| ||||| ||   ||||||||||||||||| ||| ||||||||||| |||||| ||||||||||| |||||  ||| |||    
T  14626178 caattcatgcatacaaacataacatcacagcaagagcacgaatttagcaataattatccataatcacaattcaaacaacatttgagaatttgtaaagtga 14626079  T
Q  311 tgatgattatgataaagactaacccccttacctt 344  Q
     ||||||| ||||||  |||||||||||||||||    
T  14626078 agatgattgtgataataactaacccccttacctt 14626045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 10 - 271
Target Start/End: Complemental strand, 35009702 - 35009439
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || ||||||||||||||| ||| |  ||  | |  ||||    
T  35009702 catcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataatt 35009603  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
    |||| |||||||  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| ||||    
T  35009602 caacaacaacatagcaaaattcaccaattgagcacaattttcaaaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattat 35009503  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
     |||||||||||||||||||| || ||||| |||| ||||||||||||||||||||| ||||||    
T  35009502 catcaattcatgcatacaaacttaacatcacagttagagcacgaatttagcaacaattatccat 35009439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 21 - 271
Target Start/End: Complemental strand, 1657999 - 1657748
Alignment:
Q  21 catgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 120  Q
    |||||||||| |||||||| |  |||||||||||| |||||||| |||| || ||| |||||||| || |||||||||||| ||||||||| | | |||     
T  1657999 catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataacatcaactgaacaagaatcataactcaattca-caataact 1657901  T
Q  121 tgtcaaattc-atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 218  Q
    |  |||| || ||| |||  ||||||||||||||||||| ||||| |||||| || ||||||  || | ||||||||||||||| |||| ||||||||||    
T  1657900 tagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcat 1657801  T
Q  219 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
    |||| |||||||| ||||| |||| ||||||||||||||||||||| ||||||    
T  1657800 gcatccaaacataacatcacagttagagcacgaatttagcaacaattatccat 1657748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 21 - 271
Target Start/End: Original strand, 15862484 - 15862734
Alignment:
Q  21 catgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 120  Q
    |||||||||| |||||||| |  |||||||||||| |||||||| |||| || ||| ||||| ||| | |||||||||||| ||||||||| | | |||     
T  15862484 catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattatcagcaataacataaat-gaacaagaatcataactcaattca-caataact 15862581  T
Q  121 tgtcaaattc-atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 218  Q
    |  |||| || ||| |||  ||||||||||||||||||| ||||| |||||| || ||||||  || | ||||||||||||||| |||| ||||||||||    
T  15862582 tagcaaaatccatcaattgagcacaattttcataacttcacatttatacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcat 15862681  T
Q  219 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
    ||||||||||||| ||||| |||| |||||||||||||| |||||| ||||||    
T  15862682 gcatacaaacataacatcacagttagagcacgaatttagtaacaattatccat 15862734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 14 - 346
Target Start/End: Complemental strand, 1650352 - 1650020
Alignment:
Q  14 atcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac 113  Q
    |||||| |||||||||| |||||||| |  |||||||||||| |||||||| | || || ||| |||||||||||  ||||||||| | ||||| | |||    
T  1650352 atcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaaattaac 1650253  T
Q  114 tacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc 211  Q
     | ||| |  |||| |||| | |||  |||||||||||| ||||| |||||  ||||||||| |||||| ||| | ||||||||||||||| |||| |||    
T  1650252 cataacttagcaaaattcaccaattgagcacaattttcacaacttatcattcttacatatttgaacatgtaatttcaccaacaatcatacaattatcatc 1650153  T
Q  212 aattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatga 310  Q
    ||||||||||||||||| || ||||| |||  |||||||||| |||||  |||  | ||| || | |  ||||||||||||  |||||  | |||||| |    
T  1650152 aattcatgcatacaaacgtaacatcacagtaagagcacgaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaa--tgcaaaatta 1650055  T
Q  311 tgatgattatgataaagactaacccccttaccttaa 346  Q
      ||||||||||||||||||||||||||||||||||    
T  1650054 -catgattatgataaagactaacccccttaccttaa 1650020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 23148266 - 23148335
Alignment:
Q  276 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23148266 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaacccccttacctta 23148335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 313 - 393
Target Start/End: Complemental strand, 19983224 - 19983144
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  19983224 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 19983144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 313 - 393
Target Start/End: Complemental strand, 35015089 - 35015009
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  35015089 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 35015009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 10 - 259
Target Start/End: Original strand, 25175563 - 25175815
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| |||||||||| | ||||| |    
T  25175563 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 25175662  T
Q  110 caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
     ||| ||||| |  |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||    
T  25175663 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta 25175762  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 259  Q
      ||||||||||||||||||||||| || || ||   ||||||||||||||||    
T  25175763 acatcaattcatgcatacaaacataacaacacagcaagagcacgaatttagca 25175815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 313 - 393
Target Start/End: Original strand, 18583640 - 18583720
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| ||||||||| ||||    
T  18583640 atgattatgatgaaaactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattct 18583720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 113
Target Start/End: Original strand, 27740838 - 27740941
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||||| |||||||||| || ||||||||   ||  | |||| |||||||||| ||| |||||||| |||||||    
T  27740838 catcatcaattcatgaatatgcatacccaaaccatgattcatccacaacaacatcagataatagcaaccacatcaattgaacatgaatcatatctcaatt 27740937  T
Q  110 caac 113  Q
    ||||    
T  27740938 caac 27740941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 188 - 271
Target Start/End: Original strand, 27751605 - 27751688
Alignment:
Q  188 accaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
    ||||||||||||||| || | ||||||||||||||||||||||| ||||| | || ||||||||||||||| ||| | ||||||    
T  27751605 accaacaatcatacaattgtcatcaattcatgcatacaaacataacatcacaattagagcacgaatttagctacatttatccat 27751688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 259
Target Start/End: Complemental strand, 27654235 - 27653983
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||| |||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| | | |||||||||| | ||||| |    
T  27654235 catcattaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcattggaacaagaatcacaactcaaat 27654136  T
Q  110 caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
     ||| ||||| |  |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||    
T  27654135 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta 27654036  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 259  Q
      |||||||||||||||||| |||| ||||| ||   ||||||||||||||||    
T  27654035 acatcaattcatgcatacaagcataacatcacagcaagagcacgaatttagca 27653983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 329 - 386
Target Start/End: Original strand, 21623506 - 21623563
Alignment:
Q  329 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 386  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  21623506 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 21623563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 139 - 259
Target Start/End: Complemental strand, 16825874 - 16825752
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatca--tacacttattatcaattcatgcatacaaacatatcatc 236  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |  ||||  ||  ||||||||||||||||||||||| ||||    
T  16825874 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattaattacaactaacatcaattcatgcatacaaacataacatc 16825775  T
Q  237 aaagttggagcacgaatttagca 259  Q
    | ||   ||||||||||||||||    
T  16825774 acagcaagagcacgaatttagca 16825752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 271
Target Start/End: Original strand, 29665937 - 29666137
Alignment:
Q  74 caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatat 171  Q
    ||||||||||||||| ||| |||||||| |||| |||||| ||||| |  |||| |||| | |||  | ||||||| ||||||||  ||||| | ||||     
T  29665937 caacaacatcaattgaacatgaatcatatctcatttcaacaacaacttagcaaaattcaccaattgagtacaattt-cataacttgacatttatgcatac 29666035  T
Q  172 tt--aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcc 269  Q
    ||  ||||||| ||| | ||| ||||||||||| |||| |||||||||| ||||  || ||| ||||| || | ||||||||||||| ||||||| ||||    
T  29666036 tttgaaacatgtaatttcacccacaatcatacaattatcatcaattcatacataagaaaataacatcacagctagagcacgaatttaacaacaattatcc 29666135  T
Q  270 at 271  Q
    ||    
T  29666136 at 29666137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 120
Target Start/End: Complemental strand, 18381914 - 18381821
Alignment:
Q  27 tatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 120  Q
    |||| |||||||| | |||| |||||||| ||||||||  |||||| ||||||||||||||| ||| || || || | ||||||||| ||||||    
T  18381914 tatgaatacccaagccatgaatcatcaacaacaacatcacttagcaacaacaacatcaattgaacatgactcttatcacaattcaacaacaaca 18381821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 329 - 386
Target Start/End: Complemental strand, 22361676 - 22361619
Alignment:
Q  329 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 386  Q
    ||||||||||||||||||||||| |||| | ||||  | |||||||||||||||||||    
T  22361676 ctaacccccttaccttaattatcaccaattcctaggccaagcttcactttagctccta 22361619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 386
Target Start/End: Original strand, 14152632 - 14152704
Alignment:
Q  314 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 386  Q
    |||||||||| |||| |||||||||| ||||||||| | | || | ||||| | |||||||||||||||||||    
T  14152632 tgattatgatgaagaataacccccttgccttaattagcacaaattcctagcccaagcttcactttagctccta 14152704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 18002427 - 18002395
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  18002427 atgattatgataaagactaacccccttacctta 18002395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 23995247 - 23995279
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  23995247 atgattatgataaagactaacccccttacctta 23995279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 26090059 - 26090091
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  26090059 atgattatgataaagactaacccccttacctta 26090091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 344
Target Start/End: Original strand, 4991396 - 4991427
Alignment:
Q  313 atgattatgataaagactaacccccttacctt 344  Q
    ||||||||||||||||||||||||||||||||    
T  4991396 atgattatgataaagactaacccccttacctt 4991427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 315 - 345
Target Start/End: Complemental strand, 15742150 - 15742120
Alignment:
Q  315 gattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||    
T  15742150 gattatgataaagactaacccccttacctta 15742120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 16887833 - 16887792
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 255  Q
    ||||||||||||||||||| |||| |||| ||||||||||||    
T  16887833 ttcatgcatacaaacatattatcatagttagagcacgaattt 16887792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 33324898 - 33324939
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 255  Q
    |||||||||||||||||||||||  |||| ||||||||||||    
T  33324898 ttcatgcatacaaacatatcatcctagttagagcacgaattt 33324939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 35136054 - 35136013
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 255  Q
    |||||||||||||||||||||||  |||| ||||||||||||    
T  35136054 ttcatgcatacaaacatatcatcctagttagagcacgaattt 35136013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 1657693 - 1657661
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||||||| |||||||||||||||||||||    
T  1657693 atgattatgatgaagactaacccccttacctta 1657661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 15862789 - 15862821
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||||||| |||||||||||||||||||||    
T  15862789 atgattatgatgaagactaacccccttacctta 15862821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 18823315 - 18823283
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||||||| |||||||||||||||||||||    
T  18823315 atgattatgatgaagactaacccccttacctta 18823283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 18839170 - 18839138
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||||||| |||||||||||||||||||||    
T  18839170 atgattatgatgaagactaacccccttacctta 18839138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 22362014 - 22361926
Alignment:
Q  10 catcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaat 97  Q
    |||||||||| ||||||| ||| | |||||| | |||| |||||||| |||| |||  |||||| ||||||||||||||| ||| ||||    
T  22362014 catcatcaattcatgaattatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaat 22361926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 25367438 - 25367374
Alignment:
Q  57 acaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 121  Q
    ||||||||  |||||| ||||||||||||||| ||| ||||| || | ||||||||| |||||||    
T  25367438 acaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacat 25367374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 27751742 - 27751774
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||||||| |||||||||||||||||||||    
T  27751742 atgattatgatgaagactaacccccttacctta 27751774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 32276691 - 32276659
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||||||| |||||||||||||||||||||    
T  32276691 atgattatgatgaagactaacccccttacctta 32276659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 144; Significance: 1e-75; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 16 - 345
Target Start/End: Original strand, 272031 - 272362
Alignment:
Q  16 caatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaacta 115  Q
    |||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | |||| |||||| |||||||||||| |||||| |||| |    
T  272031 caattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagctataacaccaattgaacaagaatcataactcaatccaacca 272130  T
Q  116 caacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaa 213  Q
    |||| |  |||| |||| | |||| |||||||||||| ||||| |||||| | | ||||| |||||| ||| |  ||| |||||||||| |||| |||||    
T  272131 caacttagcaaaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttctccatcaatcatacaattatcatcaa 272230  T
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatga 313  Q
    ||||| |||||||||||||||| | |||||||| ||| ||||||||| | | |||||||||||||||| |||||| ||||||||||||||||||||||||    
T  272231 ttcattcatacaaacatatcattacagttggagtacgtatttagcaatatttatccataatcaaaatttatacaatatttgaaaatttacaaaatgatga 272330  T
Q  314 tgattatgataaagactaacccccttacctta 345  Q
    ||||||||||||||||||||||||||||||||    
T  272331 tgattatgataaagactaacccccttacctta 272362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 143; Significance: 5e-75; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 21 - 345
Target Start/End: Complemental strand, 247694 - 247366
Alignment:
Q  21 catgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 120  Q
    |||||||||| |||||||| | ||||||||||||| |||||||| |||| ||   | ||||||||||| |||||||||||| ||||||  ||| |||||     
T  247694 catgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagtcataacatcaattgaacaagaatcataactcaatctaacaacaact 247595  T
Q  121 tgtcaaattcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 218  Q
    |  |||| |   ||| |||  ||||||||||| ||||| |||||| | | ||||| |||||| ||| | |||  |||||||||| |||| ||||||||||    
T  247594 tagcaaaatttaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgaaatttcaccctcaatcatacaattatcatcaattcat 247495  T
Q  219 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatga 316  Q
    ||||||||||||||||| | |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||||||||||||||||||    
T  247494 gcatacaaacatatcattacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatga 247395  T
Q  317 ttatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||    
T  247394 ttatgataaagactaacccccttacctta 247366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 34107 - 34075
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||||||| |||||||||||||||||||||    
T  34107 atgattatgatgaagactaacccccttacctta 34075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 143; Significance: 5e-75; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 10 - 345
Target Start/End: Complemental strand, 128431 - 128095
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| | || |||||||||  |||||||| |||| |||| | ||||||||||| |||||||||| | |||||||    
T  128431 catcatcaattcatgaatatgcatacccaatcaattattcatcaatcacaacatccattaacatccataacatcaattgaacaagaatcaaatctcaatt 128332  T
Q  110 caactacaacatgtcaaattcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |   ||| |||  ||||||||||| |||||  ||  | |||| |||| |||||| ||| | |||||||||| |||| ||||    
T  128331 -aacaacaacctaacaaaattcgccaattgagcacaattttcacaacttaacacctttacacatttgaacatgtaatttcaccaacaatcttacaattat 128233  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 307  Q
     ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||| |||||    
T  128232 catcaattcatgcatacaaacatatcatcacagttgaagcacgaatttagcaacaattatccataagcaaaattcatacaacttttgaaaatttgcaaaa 128133  T
Q  308 tgatgatgattatgataaagactaacccccttacctta 345  Q
    ||| ||||||||||||||||||||||||||||||||||    
T  128132 tgaagatgattatgataaagactaacccccttacctta 128095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 237
Target Start/End: Complemental strand, 31787 - 31697
Alignment:
Q  147 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 237  Q
    |||||||||| |||||| | ||||| | || ||| ||| | |||||||||||||||  ||  |||||||||||||| |||||||| |||||    
T  31787 ttcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatgcattcaaacataacatca 31697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 142; Significance: 2e-74; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 10 - 345
Target Start/End: Complemental strand, 6326 - 5990
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| |||||||| | || |||||||||  | ||||   |||| |||| | ||||||| ||| |||||||||| | |||||||    
T  6326 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataacaaaaattaacatccataacatcacttgaacaagaatcaaatctcaatt 6227  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||| | ||||| | |||| ||||||||| |||||| ||| | ||||||||||||||| ||||    
T  6226 -aacaacaacttagcaaaattcaccaattcagcacaatttttacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattat 6128  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 307  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||| ||||     
T  6127 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgcaaag 6028  T
Q  308 tgatgatgattatgataaagactaacccccttacctta 345  Q
    |||  |||||||||||||||||||||||||||||||||    
T  6027 tgaaaatgattatgataaagactaacccccttacctta 5990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 140; Significance: 3e-73; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 10 - 345
Target Start/End: Original strand, 12115 - 12450
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| |||||||| | || |||||| ||  | |||||| |||| |||  | ||||||||||| |||||||||| | |||||||    
T  12115 catcatcaatccatgaatatgcatacccaagcaattattcatgaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaatt 12214  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
      || ||||| |  |||| |||| | |||| |||||||||||| ||||| |||||| |||| ||||||||||| | | | ||||||||||||||| ||||    
T  12215 --acaacaacttaacaaaattcaccaatttagcacaattttcacaacttatcatttttacacatttaaacatgtattttcaccaacaatcatacaattat 12312  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaa-ttcatacaacatttgaaaatttacaaa 306  Q
     ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||| |||||||| |||||| ||| |||||||    
T  12313 catcaattcatgcatacaaacatatcatcacagttagagcacgaatttagcaacaattatccataatcaaaatttcatacagcatttg-aaagttacaaa 12411  T
Q  307 atgatgatgattatgataaagactaacccccttacctta 345  Q
    || | ||||||||||||||||||||||||||||||||||    
T  12412 attaagatgattatgataaagactaacccccttacctta 12450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 139; Significance: 1e-72; HSPs: 3)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 10 - 345
Target Start/End: Complemental strand, 26678 - 26340
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||| ||||| ||| |||||| |||||||| | ||||||||||||  |||||||| |||| || | | ||||||||||| |||||||||||| |||| |     
T  26678 catcctcaattcatcaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacagccataacatcaattgaacaagaatcataactcattc 26579  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  | |||||||||| ||||| |||||| ||||||||| |||||| | | | ||||| |||| |||| ||||    
T  26578 taacaacaacttagcaaaattcaccaattgagaacaattttcacaacttatcatttttacatatttgaacatgtactttcaccaataatcttacaattat 26479  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat-caaaattcatacaacatttgaaaatttacaaa 306  Q
     ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||| ||  |||||||||||||||||||||||||||||||    
T  26478 catcaattcacgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatacattatgaaaaattcatacaacatttgaaaatttacaaa 26379  T
Q  307 atgatgatgattatgataaagactaacccccttacctta 345  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  26378 atgatcatgattatgataaagactaacccccttacctta 26340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 10 - 271
Target Start/End: Complemental strand, 8440 - 8180
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||| ||||| |||||||| | ||||||||| ||| |||||||| |||| || ||||||||||||||| ||| |  ||  | |  ||||    
T  8440 catcatcaattcatgtatatgcatacccaagccatgattcataaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataatt 8341  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
    ||||   |||||  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || ||| || ||| | ||||||||||||||| ||||    
T  8340 caac---aacatagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacctgtaatttcaccaacaatcatacaattat 8244  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
     | ||||||||||||||||||||| ||||| |||| ||||||||||||||||||||| ||||||    
T  8243 caccaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatccat 8180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 329 - 386
Target Start/End: Complemental strand, 6934 - 6877
Alignment:
Q  329 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 386  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||| ||||||    
T  6934 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttaactccta 6877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 139 - 343
Target Start/End: Complemental strand, 51314 - 51110
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    |||||||||||| ||||| |||||| ||| ||||| |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||| |||||||||     
T  51314 gcacaattttcacaacttatcatttttacctatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatatcatcac 51215  T
Q  239 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 338  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  51214 agttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaatctcct 51115  T
Q  339 tacct 343  Q
    |||||    
T  51114 tacct 51110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 134; Significance: 1e-69; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 10 - 345
Target Start/End: Original strand, 8878 - 9215
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| | || |||||||||  |||||||| |||| |||| | ||||||||||| |||||||||| | ||||| |    
T  8878 catcatcaatacatgaatatgcatacccaagcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaat 8977  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| |||||  ||||| |||||| || |||||| ||| | |||||||||| |||| ||||    
T  8978 taacaacaacttaacaaaattcaccaattgagcacaattttcacaacttaacatttttacataattgaacatgtaatttcaccaacaatcttacaattat 9077  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 307  Q
     ||| ||||||||||||||||||| ||||| |  |||||||||||||||||||||||  ||||||| |||||||| |||||| ||||||||||| |||||    
T  9078 catcgattcatgcatacaaacataacatcacaaatggagcacgaatttagcaacaattttccataagcaaaattcgtacaacttttgaaaatttgcaaaa 9177  T
Q  308 tgatgatgattatgataaagactaacccccttacctta 345  Q
    ||| ||||||||||||||||||||||||||||||||||    
T  9178 tgaagatgattatgataaagactaacccccttacctta 9215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 133; Significance: 5e-69; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 10 - 335
Target Start/End: Complemental strand, 5324 - 4996
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||| ||||| |||||||||| |||||||| | ||||||||||||  |||||||| |||| || | | ||||||||||| |||||||||||| |||| |     
T  5324 catcctcaattcatgaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacagccataacatcaattgaacaagaatcataactcattc 5225  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| | | | |||||||||| |||| ||||    
T  5224 taacaacaactttgcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtactttcaccaacaatcttacaattat 5125  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat-caaaattcatacaacatttgaaaatttacaaa 306  Q
     ||||||||| ||||||||||||||| ||| |||||||| ||||||||||||||||| |||||| ||  |||||||||||||||||||||||||||||||    
T  5124 catcaattcacgcatacaaacatatcgtcacagttggagtacgaatttagcaacaattatccattatgaaaaattcatacaacatttgaaaatttacaaa 5025  T
Q  307 atgatgatgattatgataaagactaaccc 335  Q
    ||||| |||||||||||||||||||||||    
T  5024 atgataatgattatgataaagactaaccc 4996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 130; Significance: 3e-67; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 10 - 345
Target Start/End: Complemental strand, 123427 - 123087
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||| ||||| |||||||||| |||||||| | || |||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| || |||     
T  123427 catcttcaattcatgaatatgcatacccaagccattattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcataacttaatc 123328  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| ||||    
T  123327 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattat 123228  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttac-a 304  Q
     ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||   ||||||||||||||||||| |||||||| |    
T  123227 catcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgcaaatttacaa 123128  T
Q  305 aaatgatgatgattatgataaagactaacccccttacctta 345  Q
    |||| |||||||||||| | |||||||||||||||||||||    
T  123127 aaattatgatgattatggtgaagactaacccccttacctta 123087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 128; Significance: 5e-66; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 10 - 345
Target Start/End: Original strand, 8849 - 9192
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| ||||||||||||||||||| | ||||||||||||| |||||||| ||||  | ||| ||||||||||| |||  ||||||| |||||||    
T  8849 catcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaatagcaataacatcaattgaacattaatcatatctcaatt 8948  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
    |||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| ||||    
T  8949 caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattat 9048  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaa 305  Q
     ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||  ||   ||||| ||||| ||||||||||| || |||    
T  9049 catcaattcatgcatacaaacatatcatcacagatggagcacgaatttagcaacaattatccaattatgaaaaatacataccacatttgaaaaattgcaa 9148  T
Q  306 a----atgatgatgattatgataaagactaacccccttacctta 345  Q
    |    ||||||||||||||||| ||||||||| | |||||||||    
T  9149 aaatgatgatgatgattatgatgaagactaacacacttacctta 9192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 10 - 297
Target Start/End: Original strand, 148721 - 149012
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||  |||||||| | ||||||||||||| ||||| || |||| || | | ||||||||||| |||||||||| | ||||| |    
T  148721 catcatcaattcatgaatatacatacccaagcaatgattcatcaaccacaacttcaattaacaaccataacatcaattgaacaagaatcaaatctcaaat 148820  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| ||||    
T  148821 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattat 148920  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaa 297  Q
     ||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||| ||| || ||   ||||||||||||||||||||||    
T  148921 catcaattcatgcatacaaacatatcatcacagttggagcacaaatttaacaacaattatcaattatgcaaaaattcatacaacatttgaaa 149012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 245 - 345
Target Start/End: Original strand, 146838 - 146938
Alignment:
Q  245 agcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctt 344  Q
    |||| |||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  146838 agcatgaatttaggaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctt 146937  T
Q  345 a 345  Q
    |    
T  146938 a 146938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 123; Significance: 4e-63; HSPs: 4)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 106 - 271
Target Start/End: Original strand, 26892 - 27058
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  26892 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 26991  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26992 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 27058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 106 - 264
Target Start/End: Original strand, 22637 - 22796
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  22637 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 22736  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 264  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22737 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 22796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 22857 - 22889
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  22857 atgattatgataaagactaacccccttacctta 22889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 27112 - 27144
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  27112 atgattatgataaagactaacccccttacctta 27144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 123; Significance: 4e-63; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 106 - 271
Target Start/End: Complemental strand, 1748 - 1582
Alignment:
Q  106 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 204  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  1748 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 1649  T
Q  205 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1648 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 1582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 1528 - 1496
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  1528 atgattatgataaagactaacccccttacctta 1496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 118; Significance: 4e-60; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 139 - 345
Target Start/End: Complemental strand, 89586 - 89378
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    |||||||||||| ||||| | |||| | | ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||| |||||||||     
T  89586 gcacaattttcacaacttataatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaatatatcatcac 89487  T
Q  239 agttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccc 336  Q
    |||||||||||||||||||||||||| |||||| ||   |||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  89486 agttggagcacgaatttagcaacaattatccattatgcaaaaattcatagaacatttgaaaatttacaaaatgatgatgatcatgatgaagactaacccc 89387  T
Q  337 cttacctta 345  Q
    |||||||||    
T  89386 cttacctta 89378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 220 - 345
Target Start/End: Complemental strand, 107835 - 107708
Alignment:
Q  220 catacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgat 317  Q
    |||||||| ||||||||| |||||||||||||||||||||| ||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||||    
T  107835 catacaaatatatcatcacagttggagcacgaatttagcaaaaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 107736  T
Q  318 tatgataaagactaacccccttacctta 345  Q
     ||||| |||||||||||||||||||||    
T  107735 catgatgaagactaacccccttacctta 107708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 344
Target Start/End: Original strand, 130880 - 130911
Alignment:
Q  313 atgattatgataaagactaacccccttacctt 344  Q
    ||||||||||||||||||||||||||||||||    
T  130880 atgattatgataaagactaacccccttacctt 130911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 79745 - 79786
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 255  Q
    |||||||||||||||||||||||| |||| | ||||||||||    
T  79745 ttcatgcatacaaacatatcatcatagttagtgcacgaattt 79786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 101; Significance: 6e-50; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 10 - 264
Target Start/End: Original strand, 48187 - 48443
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| |||||||  | || |||||||||  |||||||| |||| |||| | ||||||||||| |||||||||| | ||||| |    
T  48187 catcatcaatccatgaatatgcatacccaggcaattattcatcaatcacaacatcaattaacatctataacatcaattgaacaagaatcaaatctcaaat 48286  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| ||||    
T  48287 taacaacaacttaacaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattat 48386  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 264  Q
     ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  48387 catcaattcatgcatacaaacatatcattacagttggagcacgaatttagcaacaat 48443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 314 - 393
Target Start/End: Original strand, 20493 - 20572
Alignment:
Q  314 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||| ||| ||||||||| ||||    
T  20493 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcctatgattct 20572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 100; Significance: 2e-49; HSPs: 3)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 10 - 271
Target Start/End: Original strand, 13506 - 13769
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||| ||||| |||||||||| ||||||||   ||||||||||||| |||||||| |||| || ||||||||||||||| ||| |  ||  | |  ||||    
T  13506 catcgtcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataatt 13605  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
    |||| |||||||  |||| |||||| |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| ||||    
T  13606 caacaacaacatagcaaaattcatcaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattat 13705  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
     ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||    
T  13706 catcaattcatgcatacaaacataacatcaaagttagagcacgaatttagcaacaattatccat 13769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 313 - 393
Target Start/End: Original strand, 42677 - 42754
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    |||||||||||||| |||||||||||||||||   |||||||||||| |||||||||||||||||| ||||||||| ||||    
T  42677 atgattatgataaaaactaacccccttacctt---tatctccaactattagctctagcttcacttttgctcctatgattct 42754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 13824 - 13856
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||||||| |||||||||||||||||||||    
T  13824 atgattatgatgaagactaacccccttacctta 13856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 93; Significance: 4e-45; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 10 - 264
Target Start/End: Original strand, 107747 - 108003
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| | |||||| | || |||||||||  |||||||| |||| |||| | ||||||||||| |||||||||| | ||||| |    
T  107747 catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaat 107846  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     ||| ||||| | ||||| |||| | |||  |||||||||| | ||||| |||||| | || |||| |||||| ||| | ||||||||||||||| ||||    
T  107847 taacaacaacttatcaaaattcaccaattgagcacaatttttacaacttatcatttttgcacatttgaacatgtaatttcaccaacaatcatacaattat 107946  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 264  Q
     ||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  107947 catcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaat 108003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 139 - 255
Target Start/End: Complemental strand, 64648 - 64527
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc-----aattcatgcatacaaacatatc 233  Q
    ||||||| |||||||||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || |||     |||||||||||| ||||||| |    
T  64648 gcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaatataattcatgcatataaacataac 64549  T
Q  234 atcaaagttggagcacgaattt 255  Q
    |||| ||   ||||||||||||    
T  64548 atcacagcaagagcacgaattt 64527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 256
Target Start/End: Complemental strand, 89905 - 89863
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaattta 256  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  89905 ttcatgcatacaaacatatcatcatagttggagcacgaattta 89863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 10 - 271
Target Start/End: Original strand, 41648 - 41911
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||| |||||||||| |||||||| | ||||||||||||| ||||||||  ||| || ||||||||||||||| ||| |  ||  | |  ||||    
T  41648 catcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcatttaacaacaacaacatcaattgaacatggttctcatcataatt 41747  T
Q  110 caactacaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
    |||| |||||||  |||| |||| ||| |||  ||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||    
T  41748 caacaacaacatagcaaaattca-ccaattgaacacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaatta 41846  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
    | ||||||||||||||||||||||| ||||| |||| ||||||||||||| ||||||| ||||||    
T  41847 tcatcaattcatgcatacaaacataacatcacagttagagcacgaatttaacaacaattatccat 41911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 41957 - 41997
Alignment:
Q  305 aaatgatgatgattatgataaagactaacccccttacctta 345  Q
    ||||||  ||||||||||| |||||||||||||||||||||    
T  41957 aaatgaacatgattatgatgaagactaacccccttacctta 41997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 84; Significance: 8e-40; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 10 - 271
Target Start/End: Complemental strand, 797 - 534
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||| ||||| | |||||||| |||||||| | ||||||||||||| |||||||| ||||||| | | ||||||||||  |||||||||||| || |||     
T  797 catcctcaattcctgaatatgcatacccaagcaatgattcatcaaccacaacatcaattagcagccataacatcaattaaacaagaatcataacttaatc 698  T
Q  110 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 207  Q
     |||   ||| |  |||| |||| | |||  | |||||||||| ||||  |||||| | | ||||| |||||| ||| | ||||||||||||||| ||||    
T  697 taacagtaacttagcaaaattcaccaattgagtacaattttcacaactcatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattat 598  T
Q  208 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  597 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccat 534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 139 - 264
Target Start/End: Original strand, 5660 - 5785
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| ||||| |||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || ||||||||||||||||||||||| ||||||    
T  5660 gcacaatattcatgacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcaa 5759  T
Q  239 agttggagcacgaatttagcaacaat 264  Q
    ||||||||||||||||||||||||||    
T  5760 agttggagcacgaatttagcaacaat 5785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 5846 - 5878
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||||| |||||||||||||||||||||||    
T  5846 atgattatggtaaagactaacccccttacctta 5878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 10 - 271
Target Start/End: Complemental strand, 34724 - 34460
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgca-caagaatcatagctcaat 108  Q
    ||||||||||||||||||||| ||||||||    |||||||||||| |||||||| | || || ||| ||||||||||  | || |||||||| ||||||    
T  34724 catcatcaatccatgaatatgcatacccaagtagtgattcatcaacaacaacatcaaataacaacaataacatcaattaaaacatgaatcatatctcaat 34625  T
Q  109 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
    ||||| ||||| |  |||| |||| | |||  | |||||||||| ||||||  |||| |||| | || |||||| ||| | ||||||||||||||| |||    
T  34624 tcaacaacaacttagcaaaattcacctattgagaacaattttcacaacttcatatttttacacaattgaacatgtaatttcaccaacaatcatacaatta 34525  T
Q  207 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
    | ||||||||||||||||||||||| ||||| |||| ||||||||||||||||| ||| ||||||    
T  34524 tcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaataattatccat 34460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 14 - 260
Target Start/End: Original strand, 2966 - 3215
Alignment:
Q  14 atcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgca-caagaatcatagctcaattcaa 112  Q
    |||||| |||||||||| |||| ||| |  |||||||||||| |||||||| | || || ||| ||||||||||  | || |||||||| ||||||||||    
T  2966 atcaattcatgaatatgcatacacaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattaaaacatgaatcatatctcaattcaa 3065  T
Q  113 ctacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattat 210  Q
    | ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| ||    
T  3066 caacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcat 3165  T
Q  211 caattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaa 260  Q
    ||||||||| ||||||||||| ||||| ||   |||||||||||||||||    
T  3166 caattcatggatacaaacataacatcacagcaagagcacgaatttagcaa 3215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 14 - 237
Target Start/End: Complemental strand, 9596 - 9371
Alignment:
Q  14 atcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac 113  Q
    |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | ||||||| |||  ||||||||| | ||||| | |||    
T  9596 atcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcatttgagcaagaatcaaatctcaaattaac 9497  T
Q  114 tacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc 211  Q
     | ||| |  |||| |||| | |||  |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||    
T  9496 aataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatc 9397  T
Q  212 aattcatgcatacaaacatatcatca 237  Q
    |||||||||||||||||||| |||||    
T  9396 aattcatgcatacaaacataacatca 9371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 14 - 237
Target Start/End: Complemental strand, 16494 - 16269
Alignment:
Q  14 atcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac 113  Q
    |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | ||||||| |||  ||||||||| | ||||| | |||    
T  16494 atcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcatttgagcaagaatcaaatctcaaattaac 16395  T
Q  114 tacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc 211  Q
     | ||| |  |||| |||| | |||  |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||    
T  16394 aataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatc 16295  T
Q  212 aattcatgcatacaaacatatcatca 237  Q
    |||||||||||||||||||| |||||    
T  16294 aattcatgcatacaaacataacatca 16269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 313 - 393
Target Start/End: Original strand, 80187 - 80267
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||| ||||    
T  80187 atgattatgataaagactaacccccttaccttaattatctccaactattagctcaagcttcacttttgctcctatgattct 80267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 62; Significance: 1e-26; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 312 - 393
Target Start/End: Complemental strand, 166197 - 166116
Alignment:
Q  312 gatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  166197 gatgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 166116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 312 - 387
Target Start/End: Complemental strand, 162111 - 162036
Alignment:
Q  312 gatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctat 387  Q
    |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  162111 gatgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 162036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 386
Target Start/End: Complemental strand, 116483 - 116410
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 386  Q
    ||||||||||| ||  ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  116483 atgattatgatgaaatctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 116410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 313 - 393
Target Start/End: Complemental strand, 31212 - 31132
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  31212 atgattgtgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 31132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 313 - 387
Target Start/End: Complemental strand, 5809 - 5735
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctat 387  Q
    ||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  5809 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 5735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 313 - 387
Target Start/End: Complemental strand, 6015 - 5941
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctat 387  Q
    ||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  6015 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 5941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 139 - 259
Target Start/End: Complemental strand, 13445 - 13325
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||     
T  13445 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 13346  T
Q  239 agttggagcacgaatttagca 259  Q
    | |  |||||||||| |||||    
T  13345 actaagagcacgaatctagca 13325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 139 - 255
Target Start/End: Original strand, 167 - 283
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| | |||||||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || ||||||||||||||||||||||| |||||     
T  167 gcacaatatacataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcac 266  T
Q  239 agttggagcacgaattt 255  Q
    ||   ||||||||||||    
T  267 agcaagagcacgaattt 283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 313 - 393
Target Start/End: Original strand, 30417 - 30497
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    ||||||||||| || | |||||||||||||||||||||| |||| || || ||| ||||||||||| ||| ||||| ||||    
T  30417 atgattatgatgaaaaataacccccttaccttaattatcaccaattattaactcaagcttcacttttgcttctatgattct 30497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 221
Target Start/End: Complemental strand, 5466 - 5254
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| | |||||| | || |||||| ||  |||||||| |||| |||  | ||||||||||| |||||||||| | ||||| |    
T  5466 catcatcaatccatgaatatgca-acccaagcaattattcattaatcacaacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaat 5368  T
Q  110 caactacaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
     ||| |||||    |||| |||| ||| |||  ||||||||||||||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||    
T  5367 taacaacaactcagcaaaattca-ccaattgaacacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaatta 5269  T
Q  207 ttatcaattcatgca 221  Q
    | |||||||||||||    
T  5268 tcatcaattcatgca 5254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 102963 - 102923
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaatt 254  Q
    ||||||||| |||||||||||||| | ||||||||||||||    
T  102963 ttcatgcattcaaacatatcatcataattggagcacgaatt 102923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 312 - 393
Target Start/End: Complemental strand, 385 - 304
Alignment:
Q  312 gatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    ||||||||||||||||| ||||||| |||||||||||||| ||||||| |||||| ||||||||||| ||||||||| ||||    
T  385 gatgattatgataaagaataaccccgttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 9382 - 9480
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 108  Q
    |||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| ||||||    
T  9382 catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaat 9480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 221
Target Start/End: Original strand, 3722 - 3936
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| | ||||||   || |||||||||  | |||||| |||| |||  | ||||||||||| |||||||||| | ||||| |    
T  3722 catcatcaatccatgaatatgcaaacccaagtaattattcatcaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaat 3821  T
Q  110 caactacaacatgtcaaa-ttcatccatttg-cacaattttcataacttctcatttct-acatatttaaacatggaatctaaccaacaatcatacactta 206  Q
     ||| ||||| |  |||| |||| | ||| | |||||||| |||||||| |||||| | |||||||| |||||| ||| | ||||||||||||||| |||    
T  3822 taacaacaacttagcaaaattcaccaattggacacaatttccataacttatcattttttacatatttgaacatgtaatttcaccaacaatcatacaatta 3921  T
Q  207 ttatcaattcatgca 221  Q
    | |||||||||||||    
T  3922 tcatcaattcatgca 3936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 236
Target Start/End: Original strand, 42997 - 43226
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    ||||||||||||||||||||| | |||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| ||| |||||| | ||||| |    
T  42997 catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcacttgaacacgaatcacatctcaaat 43096  T
Q  110 caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 206  Q
     ||| ||||| |  |  ||||||| | |||| ||||||| ||||||||||  ||||| ||||||||| |||||| ||| | ||||||||||||||| |||    
T  43097 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaatta 43196  T
Q  207 ttatcaattcatgcatacaaacatatcatc 236  Q
    | ||||||||||||||| ||||||| ||||    
T  43197 tcatcaattcatgcatagaaacataacatc 43226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 139 - 259
Target Start/End: Complemental strand, 1424 - 1304
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 238  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  1424 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 1325  T
Q  239 agttggagcacgaatttagca 259  Q
    ||   ||||||||||||||||    
T  1324 agcaagagcacgaatttagca 1304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 393
Target Start/End: Original strand, 1701 - 1780
Alignment:
Q  314 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| ||||||||| ||||    
T  1701 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattct 1780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 393
Target Start/End: Complemental strand, 19881 - 19802
Alignment:
Q  314 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| ||||||||| ||||    
T  19881 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattct 19802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 314 - 393
Target Start/End: Complemental strand, 24185 - 24106
Alignment:
Q  314 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 393  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||| ||| ||||||||| ||||    
T  24185 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcctatgattct 24106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 14181 - 14083
Alignment:
Q  139 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 237  Q
    ||||||| |||||||||| |||||| ||||||||| |||||| ||| | || |||||||||| | |||| ||||||||||||||||| ||||| |||||    
T  14181 gcacaatcttcataacttatcatttttacatatttcaacatgtaatttcactaacaatcatataattatcatcaattcatgcatacagacataacatca 14083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 260
Target Start/End: Complemental strand, 21233 - 21115
Alignment:
Q  142 caattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 241  Q
    |||| |||||||||| |||||| ||||||||| |||||| ||| | || |||||||||| | |||| ||||||| ||| ||||||||||| ||||| |      
T  21233 caatcttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatataattatcatcaattaatggatacaaacataacatcacaac 21134  T
Q  242 tggagcacgaatttagcaa 260  Q
      |||||||||||||||||    
T  21133 aagagcacgaatttagcaa 21115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 221
Target Start/End: Original strand, 54416 - 54630
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 109  Q
    |||||||||||||| |||||||||||||||   |||||||| | || ||||||||  |||  | ||||||||||||| | ||| |||||| | |||| ||    
T  54416 catcatcaatccataaatatgtatacccaactcatgattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcattt 54515  T
Q  110 caactacaacatgtc-aaattcatccatt-tgcacaattttcataacttctcatttctacata--tttaaacatggaatctaaccaacaatcatacactt 205  Q
    |||| ||||||| || ||||||| | |||  | |||| |||||||||||  ||||| ||||||  || ||||||| ||| | ||| ||||||||||| ||    
T  54516 caacaacaacatatcaaaattcaccaattgagtacaa-tttcataacttgacatttatacatactttgaaacatgcaatttcacccacaatcatacaatt 54614  T
Q  206 attatcaattcatgca 221  Q
    || |||||||||||||    
T  54615 atcatcaattcatgca 54630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 45338 - 45370
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||||||| |||||||||||||||||||||    
T  45338 atgattatgatgaagactaacccccttacctta 45370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 314 - 384
Target Start/End: Original strand, 94 - 164
Alignment:
Q  314 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcc 384  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| |||||    
T  94 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcc 164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 314 - 388
Target Start/End: Complemental strand, 6335 - 6261
Alignment:
Q  314 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 388  Q
    |||||||||| || |||||||||||||||||||||||| || |||| || ||| ||||||||||| |||||||||    
T  6335 tgattatgatgaacactaacccccttaccttaattatcacccactattaactcaagcttcacttttgctcctatg 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 314 - 351
Target Start/End: Complemental strand, 41 - 4
Alignment:
Q  314 tgattatgataaagactaacccccttaccttaattatc 351  Q
    |||||||||| || ||||||||||||||||||||||||    
T  41 tgattatgatgaacactaacccccttaccttaattatc 4  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 271
Target Start/End: Original strand, 3370 - 3453
Alignment:
Q  188 accaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 271  Q
    |||||||||||||||  ||| || ||||||||||||||||| || ||||| || | |||||||||||||||| |||| ||||||    
T  3370 accaacaatcatacaaatatcattaattcatgcatacaaacttaacatcacagctagagcacgaatttagcatcaattatccat 3453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 3210 - 3262
Alignment:
Q  12 tcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatc 64  Q
    |||||||| ||||||||||  ||||||||| ||||||||||||  ||||||||    
T  3210 tcatcaattcatgaatatgcctacccaaacaatgattcatcaatcacaacatc 3262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 386
Target Start/End: Complemental strand, 1436 - 1363
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 386  Q
    ||||||||||| ||  ||||||||||||||| ||||||| |||| | ||||||| ||||||||||||| |||||    
T  1436 atgattatgatgaattctaacccccttacctcaattatcaccaattcctagctcaagcttcactttagttccta 1363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 329 - 386
Target Start/End: Original strand, 35816 - 35873
Alignment:
Q  329 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 386  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  35816 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 35873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1295 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 329 - 386
Target Start/End: Original strand, 442 - 499
Alignment:
Q  329 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 386  Q
    ||||||||||||||| | ||||| |||| | ||||||| |||||||||||||||||||    
T  442 ctaacccccttacctcagttatcaccaattcctagctcaagcttcactttagctccta 499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 1587 - 1546
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 255  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  1587 ttcatgcatacaaacatatcatcatagttagagcacgaattt 1546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 8732 - 8691
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 255  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  8732 ttcatgcatacaaacatatcatcatagttagagcacgaattt 8691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 8216 - 8257
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 255  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  8216 ttcatgcatacaaacatatcatcatagttagagcacgaattt 8257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 10 - 99
Target Start/End: Original strand, 48514 - 48603
Alignment:
Q  10 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatca 99  Q
    ||||||||||||||||||||| | |||||| | || |||||||||  | |||||| |||| |||| | |||||||| || ||||||||||    
T  48514 catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacatccataacatcaagtgaacaagaatca 48603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 146 - 264
Target Start/End: Complemental strand, 56226 - 56106
Alignment:
Q  146 tttcataacttctcatttctacatattt--aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 243  Q
    |||||||||||  ||||| |||||| ||  ||||||| ||| | | | ||||||||||| |||| ||||| ||||||| || || ||| ||||| ||||     
T  56226 tttcataacttgacatttatacatactttaaaacatgtaatttcagccacaatcatacaattatcatcaaatcatgcacacgaaaataacatcacagtta 56127  T
Q  244 gagcacgaatttagcaacaat 264  Q
    ||||||||||||| |||||||    
T  56126 gagcacgaatttaacaacaat 56106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 70348 - 70307
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 255  Q
    |||||||||||||||||||||||| |||||||| ||||||||    
T  70348 ttcatgcatacaaacatatcatcatagttggagtacgaattt 70307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 57424 - 57392
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  57424 atgattatgataaagactaacccccttacctta 57392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 329 - 386
Target Start/End: Complemental strand, 76756 - 76699
Alignment:
Q  329 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 386  Q
    |||||||||||||||||||||||  ||| | ||||| | |||||||||||||||||||    
T  76756 ctaacccccttaccttaattatcagcaattcctagcccaagcttcactttagctccta 76699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 346
Target Start/End: Complemental strand, 193429 - 193396
Alignment:
Q  313 atgattatgataaagactaacccccttaccttaa 346  Q
    ||||||||||||||||||||||||||||||||||    
T  193429 atgattatgataaagactaacccccttaccttaa 193396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 6475 - 6443
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  6475 atgattatgataaagactaacccccttacctta 6443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 910 - 878
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  910 atgattatgataaagactaacccccttacctta 878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 9914 - 9882
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  9914 atgattatgataaagactaacccccttacctta 9882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 13317 - 13285
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  13317 atgattatgataaagactaacccccttacctta 13285  T

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Target: scaffold0032 (Bit Score: 33; Significance: 0.000000002; HSPs: 4)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 55904 - 55936
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  55904 atgattatgataaagactaacccccttacctta 55936  T

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Target: scaffold0032; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 108107 - 108075
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||||||||||||||||||||||    
T  108107 atgattatgataaagactaacccccttacctta 108075  T

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Target: scaffold0032; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 104871 - 104793
Alignment:
Q  10 catcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaatt 87  Q
    |||||||||| ||||||| ||| |||||||| | |||| |||||||| |||| |||  |||||| ||||||||||||||    
T  104871 catcatcaattcatgaattatgaatacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaatt 104793  T

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Target: scaffold0032; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 93814 - 93773
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 255  Q
    |||||||||||| ||||||||||| | |||||||||||||||    
T  93814 ttcatgcatacatacatatcatcataattggagcacgaattt 93773  T

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Target: scaffold0207 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 302 - 345
Target Start/End: Original strand, 18015 - 18058
Alignment:
Q  302 acaaaatgatgatgattatgataaagactaacccccttacctta 345  Q
    ||||||| || ||||||||||| |||||||||||||||||||||    
T  18015 acaaaataattatgattatgatgaagactaacccccttacctta 18058  T

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Target: scaffold0006 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 121
Target Start/End: Complemental strand, 197477 - 197390
Alignment:
Q  34 acccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 121  Q
    |||||||| |||| |||||||| |||| |||  |||||| ||||||||||||||| ||| |||||  | | ||||||||| |||||||    
T  197477 acccaaaccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaacat 197390  T

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Target: scaffold0409 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 255
Target Start/End: Complemental strand, 1386 - 1348
Alignment:
Q  217 atgcatacaaacatatcatcaaagttggagcacgaattt 255  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  1386 atgcatacaaacatatcatcatagttagagcacgaattt 1348  T

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Target: scaffold0409; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 255
Target Start/End: Complemental strand, 9641 - 9603
Alignment:
Q  217 atgcatacaaacatatcatcaaagttggagcacgaattt 255  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  9641 atgcatacaaacatatcatcatagttagagcacgaattt 9603  T

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Target: scaffold1272 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 386
Target Start/End: Original strand, 632 - 689
Alignment:
Q  329 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 386  Q
    |||||||||||||| |||||||| | || | ||||| | |||||||||||||||||||    
T  632 ctaacccccttaccataattatcactaattcctagcccaagcttcactttagctccta 689  T

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Target: scaffold0970 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 2471 - 2532
Alignment:
Q  27 tatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattg 88  Q
    |||| |||||||| | |||| |||||||| ||||||||  |||||| |||||||||||||||    
T  2471 tatgaatacccaagccatgaatcatcaacaacaacatcacttagcaacaacaacatcaattg 2532  T

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Target: scaffold0483 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 386
Target Start/End: Original strand, 6999 - 7056
Alignment:
Q  329 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 386  Q
    |||||||||||||| |||||||| |||| | ||||| | | |||||||||||||||||    
T  6999 ctaacccccttaccataattatcaccaattcctagcccaaccttcactttagctccta 7056  T

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Target: scaffold0151 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 22463 - 22422
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 255  Q
    |||||||||||||||||||||||| | || ||||||||||||    
T  22463 ttcatgcatacaaacatatcatcatatttagagcacgaattt 22422  T

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Target: scaffold0080 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 386
Target Start/End: Complemental strand, 43708 - 43651
Alignment:
Q  329 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 386  Q
    ||||||||||||||||||||| | | || | ||||| | |||||||||||||||||||    
T  43708 ctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 43651  T

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Target: scaffold0010 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 386
Target Start/End: Original strand, 31357 - 31414
Alignment:
Q  329 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 386  Q
    ||||||||||||||||||||| | | || | ||||| | |||||||||||||||||||    
T  31357 ctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 31414  T

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Target: scaffold0700 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 2548 - 2612
Alignment:
Q  34 acccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatc 98  Q
    |||||||| |||| |||||||| |||| |||  |||||| ||||||||||||||| ||| |||||    
T  2548 acccaaaccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaatc 2612  T

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Target: scaffold0389 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 10868 - 10908
Alignment:
Q  214 ttcatgcatacaaacatatcatcaaagttggagcacgaatt 254  Q
    |||||||||||||||||||||||| || | |||||||||||    
T  10868 ttcatgcatacaaacatatcatcatagatagagcacgaatt 10908  T

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Target: scaffold0367 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 17241 - 17209
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||||||| |||||||||||||||||||||    
T  17241 atgattatgatgaagactaacccccttacctta 17209  T

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Target: scaffold0335 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 5508 - 5476
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||||||| |||||||||||||||||||||    
T  5508 atgattatgatgaagactaacccccttacctta 5476  T

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Target: scaffold0303 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 4378 - 4346
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||||||||||| |||||||||||||||||    
T  4378 atgattatgataaagtctaacccccttacctta 4346  T

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Target: scaffold0234 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 17336 - 17304
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||||||||||||||||||| |||||||||    
T  17336 atgattatgataaagactaacccgcttacctta 17304  T

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Target: scaffold0173 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 5549 - 5581
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||||||| |||||||||||||||||||||    
T  5549 atgattatgatgaagactaacccccttacctta 5581  T

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Target: scaffold0118 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 34340 - 34308
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    ||||||||||| |||||||||||||||||||||    
T  34340 atgattatgatgaagactaacccccttacctta 34308  T

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Target: scaffold0039 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 12450 - 12418
Alignment:
Q  313 atgattatgataaagactaacccccttacctta 345  Q
    |||||||||||||| ||||||||||||||||||    
T  12450 atgattatgataaaaactaacccccttacctta 12418  T

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