View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17367_high_13 (Length: 290)
Name: NF17367_high_13
Description: NF17367
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17367_high_13 |
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Alignment Details
Target: chr3 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 9 - 276
Target Start/End: Complemental strand, 53676450 - 53676183
Alignment:
| Q |
9 |
gagatgaaaaagaaagtgggatcccaactatccaaagccaaataggagtggctataactttttctttgctgaaaagcattacaagctcaaagaactctac |
108 |
Q |
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| T |
53676450 |
gagaagaaaaagaaagtgggatcccaactatccaaagccaaataggagtggctataactttttctttgctgaaaagcattacaagctcaaagaactctac |
53676351 |
T |
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| Q |
109 |
ccaaacagagaaagggagtttaccaaaatgattggtcagtcctggaatagtctcagccctgaagaaagaatggtaattaaaagggtcatttcatttgtgt |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53676350 |
ccaaacagagaaagggagtttaccaaaatgattggtcagtcctggaatagtctcagccctgaagaaagaatggtaattaaaagggtcatttcatttgtgt |
53676251 |
T |
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| Q |
209 |
gtattgctttatcctaattggtctttacattgttgtttatctagaatctggttatcaaagttaatagt |
276 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53676250 |
gtattgctttatcctaattggtctttacattgttgtttatctagaatctggttatcaaagttaatagt |
53676183 |
T |
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