View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17367_low_12 (Length: 336)
Name: NF17367_low_12
Description: NF17367
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17367_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 5 - 316
Target Start/End: Original strand, 31331483 - 31331795
Alignment:
| Q |
5 |
tgcatcaaattcaattattcttagcttctatttgt-----tttaacgtgtgttttctgtaaagctacagaatataacttataacatcccgttaaattcct |
99 |
Q |
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| T |
31331483 |
tgcatcaatttcaattattcttagcttctataaatacaactttaacgtgtgttttctgtaaagctacagaatataacttgtaacatcccgttaaattcct |
31331582 |
T |
|
| Q |
100 |
ctcatttcatccacccctttctctctccaaacttgagatttccctcattcccttcctccactcacggcttcccaaatcacatttaatctaacatgcaagt |
199 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||| |
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| T |
31331583 |
ctcatttcatccactcctttctctctccaaacttgagatttccctcatccccttcctccactcacggcttcccaaatctcacttaatctaacatgcaagt |
31331682 |
T |
|
| Q |
200 |
ggatctaaagaaaaacagaacaatggaaacactttgattttaccttcctccattctttcccatgaaccttccctcctttaagttcaaactccttgcaaaa |
299 |
Q |
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||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||| |
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| T |
31331683 |
ggatctaaagaaaaatagaacaatggaaagactttgatttttccttcctccattctttcccatgaacagaacc----caaagttcaaactccttgcaaaa |
31331778 |
T |
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| Q |
300 |
tcatcttatcttttggt |
316 |
Q |
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||||||||||||||||| |
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| T |
31331779 |
tcatcttatcttttggt |
31331795 |
T |
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