View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17368_low_11 (Length: 238)
Name: NF17368_low_11
Description: NF17368
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17368_low_11 |
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Alignment Details
Target: chr2 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 15 - 222
Target Start/End: Complemental strand, 7685602 - 7685395
Alignment:
| Q |
15 |
tcttaaattaactagagaaatttagagaagaaaaccatcaaatcctattttaattgtctctaaatttatgacgaggaaattagagagattttattctttc |
114 |
Q |
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| T |
7685602 |
tcttaaattaactagagaaatttagagaagaaaaccatcaaatcctattttaattgtctctaaatttatgacgaggaaattagagacattttattctttc |
7685503 |
T |
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| Q |
115 |
tttaaatttgtaatttgtgtgtgatggattggatctcgagtaatttttgttctaattgattttctttttattttagggagaccaagcatcaataataggg |
214 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7685502 |
tttaaatttgtaatttgtgtgtgatggattggatctcgagttatttttgttctaattgattttctttttattttagggagaccaagcatcaataataggg |
7685403 |
T |
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| Q |
215 |
ggagttat |
222 |
Q |
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|||||||| |
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| T |
7685402 |
ggagttat |
7685395 |
T |
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