View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17368_low_7 (Length: 382)
Name: NF17368_low_7
Description: NF17368
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17368_low_7 |
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Alignment Details
Target: chr1 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 79 - 364
Target Start/End: Original strand, 26832206 - 26832490
Alignment:
| Q |
79 |
catgacgatgacttctcatgacagactgtatccaaatcaaatatgcactcttttaagtagcattttccaccttttccatgttactttttatgcacacaaa |
178 |
Q |
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| T |
26832206 |
catgacgatgacttctcatgacagactgtatccaaatcaaatatgcactcttttaagtagcattttccaccttttccatgttactttttatgcacacaaa |
26832305 |
T |
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| Q |
179 |
agaaaccaaccaaaggaagaaaataacactagacttctttggagatcataaaaagaagcatacgtggctaaataagaaagccattcaagtactaagtggg |
278 |
Q |
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||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26832306 |
agaaaccaaccaaaggaagaaaataacactagacttctttgaagatcat-aaaagaagcatacgtggctaaataagaaagccattcaagtactaagtggg |
26832404 |
T |
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| Q |
279 |
acttacttcagccacggccaaaatctaacattctcaaaataaacaaaatctaccgacagattgattttattgttttgtagctcttt |
364 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |
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| T |
26832405 |
acttacttcagccacggccaaaatctaacattctcaaaataaacaaaatctaccgacagtttgattttattgttttgcggctcttt |
26832490 |
T |
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