View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17372_low_12 (Length: 269)
Name: NF17372_low_12
Description: NF17372
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17372_low_12 |
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Alignment Details
Target: chr2 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 19603756 - 19603499
Alignment:
| Q |
1 |
ccaaaaacatatttaaatctataaatattaattactttcaaattgggaataaacggtcggtcaatccaagaaaagtactacaaccaattaccagaaaatc |
100 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
19603756 |
ccaaaaacatatttaagcctataaatattaattactttcaaattgggaataaacggtcggtctatccaagaaaagtactacaaccaattaccagaaaatc |
19603657 |
T |
|
| Q |
101 |
gtcccccaagtgccgattgcaagtgatattccctctcaattgcaagtacctgaattttgccaaaatcataaacttagaatcaatgttacttcgaatgcaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19603656 |
gtcccccaagtgccgattgcaagtgatattccctctcaattgcaagtacctgaattttgccaaaatcataaacttagaatcaatgttacttcgaatgcaa |
19603557 |
T |
|
| Q |
201 |
ctacaattactactcccaccaaaatacannnnnnnttcatcttcacgcaccctatgct |
258 |
Q |
| |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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|
| T |
19603556 |
ctacaattactactcccaccaaaatacacccccccttcatcttcacgcaccctatgct |
19603499 |
T |
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