View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17372_low_6 (Length: 396)

Name: NF17372_low_6
Description: NF17372
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17372_low_6
NF17372_low_6
[»] chr7 (5 HSPs)
chr7 (16-390)||(7190133-7190504)
chr7 (291-390)||(8839327-8839426)
chr7 (291-390)||(29059801-29059900)
chr7 (291-390)||(31492099-31492198)
chr7 (301-390)||(2657892-2657981)
[»] chr1 (3 HSPs)
chr1 (311-390)||(29124741-29124820)
chr1 (301-377)||(45806245-45806321)
chr1 (294-390)||(22022116-22022212)
[»] chr8 (5 HSPs)
chr8 (291-387)||(15682928-15683024)
chr8 (301-390)||(12958141-12958230)
chr8 (301-390)||(2743929-2744018)
chr8 (291-390)||(19715772-19715871)
chr8 (338-390)||(30936000-30936052)
[»] chr6 (4 HSPs)
chr6 (311-390)||(12411144-12411223)
chr6 (296-390)||(25084030-25084124)
chr6 (300-377)||(28099252-28099329)
chr6 (328-390)||(21910201-21910263)
[»] chr3 (3 HSPs)
chr3 (291-390)||(25224695-25224794)
chr3 (342-390)||(28967279-28967327)
chr3 (338-390)||(40294608-40294660)
[»] chr2 (4 HSPs)
chr2 (301-390)||(31579285-31579374)
chr2 (301-390)||(12133286-12133375)
chr2 (291-390)||(5394393-5394491)
chr2 (291-390)||(44732619-44732718)
[»] chr4 (7 HSPs)
chr4 (291-390)||(31307112-31307211)
chr4 (311-390)||(38844234-38844313)
chr4 (301-352)||(51626362-51626413)
chr4 (332-390)||(25712503-25712561)
chr4 (301-390)||(38766085-38766174)
chr4 (291-375)||(35972354-35972438)
chr4 (291-359)||(46016176-46016244)
[»] scaffold0182 (1 HSPs)
scaffold0182 (291-377)||(26340-26426)
[»] chr5 (2 HSPs)
chr5 (301-390)||(10591923-10592012)
chr5 (292-372)||(18909348-18909428)


Alignment Details
Target: chr7 (Bit Score: 288; Significance: 1e-161; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 16 - 390
Target Start/End: Original strand, 7190133 - 7190504
Alignment:
Q  16 cagatataacataccatattcctttaagaggagagaaggggtagcatgacctaccagtttaggaataatgagaagttcatgaattataggtaactatttg 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7190133 cagatataacataccatattcctttaagaggagagaaggggtagcatgacctaccagtttaggaataatgagaagttcatgaattataggtaactatttg 7190232  T
Q  116 agagagaagttatagttgaaattgatgcaaagcatatctacttgtttaccaatagagcggtttcatagagaagaaacaataacacgcaaaacttgttagg 215  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||    
T  7190233 agagagaagttatagttgaaattgatgcaaagtatatctacttgtttaccaatagaggggtttcatagagaagaaacaata--acgcaaaacttgttagg 7190330  T
Q  216 gtttcatatgataacaaccacgtaacatattaaaaggttacaaaaacaacatataataagcgtcgtcttctctttggcggcaagttctccgtaaaagttt 315  Q
    |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  7190331 gtttcatatgataacaacaacataacatattaaaaggttac-aaaacaacatataataagcgtcgtcttctctttggcggtaagttctccctaaaagttt 7190429  T
Q  316 taacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 390  Q
    ||||||||||| ||||||||| ||| |||| ||||||| |||| | ||||| ||||||||| || || |||||||    
T  7190430 taacacggctgcatgcccaatgctgaattcaaactcataaccttggttaagctagaagagatttattccatctca 7190504  T

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Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 390
Target Start/End: Original strand, 8839327 - 8839426
Alignment:
Q  291 ggcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 390  Q
    |||||||  |||||| ||| ||||||||| | |||| ||||||||  |||||||||||| || ||||| | ||||| ||||||||||  |||||||||||    
T  8839327 ggcggcagattctccctaagagttttaacgctgctgcatgcccaaggctggattcgaacccaggaccttggttaagctagaagagacccgtttcatctca 8839426  T

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Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 390
Target Start/End: Complemental strand, 29059900 - 29059801
Alignment:
Q  291 ggcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 390  Q
    ||||||| | ||||| ||| ||||||||||| |||| ||||||||  |||||||||||| || ||||| | ||||| ||||||||||  ||| |||||||    
T  29059900 ggcggcaggctctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggaccttggttaagctagaagagacccgttccatctca 29059801  T

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Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 390
Target Start/End: Complemental strand, 31492198 - 31492099
Alignment:
Q  291 ggcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 390  Q
    ||||||| | ||||| ||| ||||||||||| |||| ||||||||  |||||||||||| || ||||| | ||||| ||||||||||  ||| |||||||    
T  31492198 ggcggcaggctctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggaccttggttaagctagaagagacccgttccatctca 31492099  T

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Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 390
Target Start/End: Original strand, 2657892 - 2657981
Alignment:
Q  301 tctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 390  Q
    ||||| ||| |||||||||   |||| ||||||||  ||| ||| ||||||| | ||| ||||||||||||||||||| ||| |||||||    
T  2657892 tctccttaagagttttaacgttgctgcatgcccaaggctgtatttgaactcagggccttgattaagttagaagagactcgttccatctca 2657981  T

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Target: chr1 (Bit Score: 44; Significance: 6e-16; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 311 - 390
Target Start/End: Complemental strand, 29124820 - 29124741
Alignment:
Q  311 agttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 390  Q
    ||||||||| | |||| ||||||||| ||||||||||||||||||||  | ||||| ||||||||||| |||||||||||    
T  29124820 agttttaacgctgctgcatgcccaatgctggattcgaactcatgaccctggttaagctagaagagactcgtttcatctca 29124741  T

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Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 377
Target Start/End: Complemental strand, 45806321 - 45806245
Alignment:
Q  301 tctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagac 377  Q
    ||||| ||| |||||||| || |||| |||||||| |||| ||||||||||| ||||| | ||||| ||||||||||    
T  45806321 tctccctaagagttttaaaactgctgcatgcccaagactgaattcgaactcaggaccttggttaagatagaagagac 45806245  T

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Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 390
Target Start/End: Complemental strand, 22022212 - 22022116
Alignment:
Q  294 ggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 390  Q
    |||||||||||| ||| ||||||||  | |||| ||||||||  |||||||||||| ||  ||||   ||||| |||||||||| |||| |||||||    
T  22022212 ggcaagttctccctaagagttttaatgctgctgcatgcccaaggctggattcgaacccacaaccttagttaagctagaagagacctgttccatctca 22022116  T

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Target: chr8 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 291 - 387
Target Start/End: Complemental strand, 15683024 - 15682928
Alignment:
Q  291 ggcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatc 387  Q
    ||||||| | ||||| ||| ||||||||| | |||| ||||||||  ||||||||||||||| ||||| ||||||| ||||||||||| ||| ||||    
T  15683024 ggcggcaggctctccctaagagttttaacgctgctgcatgcccaaggctggattcgaactcaggaccttgattaagctagaagagactcgttccatc 15682928  T

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Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 301 - 390
Target Start/End: Original strand, 12958141 - 12958230
Alignment:
Q  301 tctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 390  Q
    ||||| ||| ||||||||| | |||| ||||||||| |||||||| ||| |||||||| | ||||| ||||||||||| ||| |||||||    
T  12958141 tctccctaagagttttaacgctgctgcatgcccaatgctggattcaaacccatgaccttggttaagctagaagagactagttccatctca 12958230  T

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Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 301 - 390
Target Start/End: Complemental strand, 2744018 - 2743929
Alignment:
Q  301 tctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 390  Q
    ||||| ||| ||||||||||| |||| ||||||||  |||||||||||| || ||||| | ||||| ||||||||||  ||| |||||||    
T  2744018 tctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggaccttggttaagctagaagagacccgttccatctca 2743929  T

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Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 291 - 390
Target Start/End: Original strand, 19715772 - 19715871
Alignment:
Q  291 ggcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 390  Q
    ||||||||| ||||| | | ||||||||| | |||| ||||||||  |||||||||||| || ||||| | ||||| ||||| |||| |||| |||||||    
T  19715772 ggcggcaagctctccctgagagttttaacgctgctgcatgcccaaggctggattcgaacccaggaccttggttaagctagaaaagacatgttccatctca 19715871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 338 - 390
Target Start/End: Complemental strand, 30936052 - 30936000
Alignment:
Q  338 ctggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 390  Q
    ||||||||||||||| ||||| | ||||||||||||||||  ||| |||||||    
T  30936052 ctggattcgaactcaggaccttggttaagttagaagagacccgttccatctca 30936000  T

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Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 311 - 390
Target Start/End: Complemental strand, 12411223 - 12411144
Alignment:
Q  311 agttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 390  Q
    ||||||||| | |||| ||||||||  ||||||||||||||| ||||| | |||||||||||||||| |||| |||||||    
T  12411223 agttttaacgctgctgcatgcccaaggctggattcgaactcaggaccttggttaagttagaagagacctgttccatctca 12411144  T

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Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 296 - 390
Target Start/End: Complemental strand, 25084124 - 25084030
Alignment:
Q  296 caagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 390  Q
    |||| ||||| ||| ||||||||||  |||| ||| |||| |||| ||||||||||| ||| | ||||||| |||||||||||||| ||||||||    
T  25084124 caagctctccctaagagttttaacattgctgcatgtccaagactgaattcgaactcaagactttgattaagctagaagagacttgtgtcatctca 25084030  T

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Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 377
Target Start/End: Complemental strand, 28099329 - 28099252
Alignment:
Q  300 ttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagac 377  Q
    |||||| ||||||||||||||| |||| ||||||||  |||||||||||| || |||||   ||||| ||||||||||    
T  28099329 ttctccctaaaagttttaacactgctgcatgcccaaggctggattcgaacccaggaccttagttaaggtagaagagac 28099252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 328 - 390
Target Start/End: Complemental strand, 21910263 - 21910201
Alignment:
Q  328 atgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 390  Q
    ||||||||  |||||||||||| || || || | ||||| |||||||||||||||||||||||    
T  21910263 atgcccaaggctggattcgaacccaggatcttggttaagctagaagagacttgtttcatctca 21910201  T

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Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 291 - 390
Target Start/End: Complemental strand, 25224794 - 25224695
Alignment:
Q  291 ggcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 390  Q
    ||||||||||||||| ||| ||||||||| | |||| || ||||| ||| ||||||||| || ||||| | ||||| ||||||||||  |||||||||||    
T  25224794 ggcggcaagttctccttaagagttttaacgctgctgcattcccaaaacttgattcgaacccaggaccttggttaagctagaagagacccgtttcatctca 25224695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 342 - 390
Target Start/End: Original strand, 28967279 - 28967327
Alignment:
Q  342 attcgaactcatgacctagattaagttagaagagacttgtttcatctca 390  Q
    |||||||| |||||||| | ||||||||||||||||| || ||||||||    
T  28967279 attcgaacacatgaccttggttaagttagaagagactcgtgtcatctca 28967327  T

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Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 338 - 390
Target Start/End: Complemental strand, 40294660 - 40294608
Alignment:
Q  338 ctggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 390  Q
    ||||||||||||||| ||||| ||||||| |||| |||||| || ||||||||    
T  40294660 ctggattcgaactcaggaccttgattaaggtagaggagactcgtgtcatctca 40294608  T

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Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 301 - 390
Target Start/End: Original strand, 31579285 - 31579374
Alignment:
Q  301 tctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 390  Q
    ||||| ||||||||||||||| | || ||||||||  |||||||||||| || ||||| ||||||| ||||||||||  ||| |||||||    
T  31579285 tctccctaaaagttttaacactgttgcatgcccaaggctggattcgaacccaagaccttgattaagctagaagagacccgttacatctca 31579374  T

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Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 301 - 390
Target Start/End: Original strand, 12133286 - 12133375
Alignment:
Q  301 tctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 390  Q
    ||||| ||| |||||||||   |||| ||| ||||  |||||||||||| |||||||| ||||||| ||||||||||| ||| |||||||    
T  12133286 tctccctaagagttttaacgttgctgcatgtccaaggctggattcgaacccatgaccttgattaagctagaagagactcgttccatctca 12133375  T

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Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 291 - 390
Target Start/End: Complemental strand, 5394491 - 5394393
Alignment:
Q  291 ggcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 390  Q
    ||||||| | ||||| ||| |||||||||| | ||| ||||||||  |||||||||||| || ||||| | ||||| ||||||||||| ||| |||||||    
T  5394491 ggcggcaggctctccctaagagttttaacatg-ctgcatgcccaaggctggattcgaacccaggaccttggttaagctagaagagactcgttccatctca 5394393  T

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Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 291 - 390
Target Start/End: Original strand, 44732619 - 44732718
Alignment:
Q  291 ggcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 390  Q
    ||||||| | ||||| ||| ||||||||||| |||| ||||||||  |||||||||||| || ||||| | ||||| || |||||||  ||| |||||||    
T  44732619 ggcggcaggctctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggaccttggttaagctataagagacccgttccatctca 44732718  T

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Target: chr4 (Bit Score: 36; Significance: 0.00000000004; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 390
Target Start/End: Original strand, 31307112 - 31307211
Alignment:
Q  291 ggcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 390  Q
    ||||||| | ||||| ||| ||||||||||| |||| ||||||||  |||||||||||| || ||||| | ||||| ||||||||||  ||| |||||||    
T  31307112 ggcggcaggctctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggaccttggttaagctagaagagacccgttccatctca 31307211  T

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Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 390
Target Start/End: Original strand, 38844234 - 38844313
Alignment:
Q  311 agttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 390  Q
    ||||||||| | | || ||||||||  ||||||||||||||||||||| | ||||| ||||||||||| ||| |||||||    
T  38844234 agttttaacgctgttgcatgcccaaagctggattcgaactcatgaccttggttaagctagaagagactcgttccatctca 38844313  T

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Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 301 - 352
Target Start/End: Original strand, 51626362 - 51626413
Alignment:
Q  301 tctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactca 352  Q
    ||||| ||||||||||||||| |||| ||||||||  |||||||||||||||    
T  51626362 tctccctaaaagttttaacactgctgcatgcccaaggctggattcgaactca 51626413  T

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Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 390
Target Start/End: Original strand, 25712503 - 25712561
Alignment:
Q  332 ccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 390  Q
    |||| |||||||||||| ||||||||| | ||||| |||| ||||||||| ||||||||    
T  25712503 ccaagactggattcgaattcatgaccttgtttaagctagaggagacttgtatcatctca 25712561  T

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Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 390
Target Start/End: Complemental strand, 38766174 - 38766085
Alignment:
Q  301 tctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 390  Q
    ||||| ||| ||||||||| | |||| ||||||||  |||||||| ||| || ||||| | ||||| ||||||||||| ||| |||||||    
T  38766174 tctccctaagagttttaacgctgctgcatgcccaaggctggattcaaacccaggaccttggttaagctagaagagactcgttccatctca 38766085  T

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Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 375
Target Start/End: Complemental strand, 35972438 - 35972354
Alignment:
Q  291 ggcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagag 375  Q
    ||||||||  ||||| ||| ||||||||| | ||||||||||||   |||||||||||| || ||||| | ||||| ||||||||    
T  35972438 ggcggcaaactctccctaatagttttaacgctgctgtatgcccatggctggattcgaacccaagaccttggttaagctagaagag 35972354  T

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Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 359
Target Start/End: Complemental strand, 46016244 - 46016176
Alignment:
Q  291 ggcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgaccta 359  Q
    ||||||| | ||||| ||| ||||||||||| |||| ||||||||  |||||||||||| || ||||||    
T  46016244 ggcggcaggctctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggaccta 46016176  T

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Target: scaffold0182 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 377
Target Start/End: Complemental strand, 26426 - 26340
Alignment:
Q  291 ggcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagac 377  Q
    ||||||| | ||||| ||| ||||||||||| |||| ||||||||  |||||||||||| || ||||| | ||||| ||||||||||    
T  26426 ggcggcaggctctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggaccttggttaagctagaagagac 26340  T

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Target: chr5 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 390
Target Start/End: Complemental strand, 10592012 - 10591923
Alignment:
Q  301 tctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 390  Q
    ||||| ||| ||||||||||| |||| ||||||||  |||||||||||| || ||||| | ||||  ||||||||||  ||| |||||||    
T  10592012 tctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggaccttggttaatctagaagagacccgttccatctca 10591923  T

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Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 372
Target Start/End: Original strand, 18909348 - 18909428
Alignment:
Q  292 gcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaa 372  Q
    ||||||| |||||| ||| ||||||||||| |||| || |||||  ||||||||||||  | ||||| ||||||| |||||    
T  18909348 gcggcaaattctccctaagagttttaacactgctgcatacccaaggctggattcgaacctaggaccttgattaagctagaa 18909428  T

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