View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17373_low_1 (Length: 814)

Name: NF17373_low_1
Description: NF17373
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17373_low_1
NF17373_low_1
[»] chr5 (42 HSPs)
chr5 (18-797)||(11094867-11095643)
chr5 (127-195)||(38047850-38047918)
chr5 (20-95)||(36638644-36638719)
chr5 (61-104)||(37063162-37063205)
chr5 (50-104)||(20982223-20982277)
chr5 (159-237)||(10125650-10125725)
chr5 (19-103)||(40499764-40499848)
chr5 (61-104)||(7096215-7096258)
chr5 (61-104)||(28586854-28586897)
chr5 (62-251)||(42646855-42647042)
chr5 (150-204)||(4273339-4273393)
chr5 (41-99)||(13224348-13224406)
chr5 (204-258)||(29013112-29013166)
chr5 (50-104)||(32172581-32172635)
chr5 (59-101)||(34975315-34975357)
chr5 (50-104)||(35095871-35095925)
chr5 (50-104)||(35135750-35135804)
chr5 (161-251)||(10640019-10640105)
chr5 (61-159)||(16889674-16889774)
chr5 (204-249)||(39257314-39257359)
chr5 (61-101)||(6593239-6593279)
chr5 (68-104)||(10303747-10303783)
chr5 (61-101)||(12407752-12407792)
chr5 (61-148)||(35960353-35960441)
chr5 (161-250)||(41419385-41419470)
chr5 (66-101)||(7853602-7853637)
chr5 (61-104)||(11667102-11667145)
chr5 (150-193)||(14364276-14364319)
chr5 (116-159)||(37588391-37588434)
chr5 (61-104)||(39128578-39128621)
chr5 (50-104)||(9860886-9860940)
chr5 (39-101)||(19460039-19460101)
chr5 (204-258)||(24085127-24085181)
chr5 (61-103)||(34690813-34690855)
chr5 (61-154)||(41534381-41534475)
chr5 (163-250)||(41534506-41534589)
chr5 (61-105)||(3970767-3970812)
chr5 (150-195)||(10280570-10280614)
chr5 (61-98)||(12460094-12460131)
chr5 (123-172)||(17756386-17756435)
chr5 (50-99)||(26516226-26516275)
chr5 (59-104)||(29117018-29117063)
[»] chr2 (40 HSPs)
chr2 (50-258)||(28803441-28803648)
chr2 (50-149)||(17952742-17952843)
chr2 (61-195)||(10143111-10143247)
chr2 (153-250)||(4350747-4350841)
chr2 (152-250)||(787388-787483)
chr2 (152-204)||(1801724-1801776)
chr2 (61-104)||(37033983-37034026)
chr2 (166-251)||(40400818-40400900)
chr2 (45-99)||(10190202-10190256)
chr2 (50-104)||(31461366-31461420)
chr2 (18-137)||(10150651-10150772)
chr2 (61-102)||(12215746-12215787)
chr2 (50-111)||(13864578-13864639)
chr2 (61-105)||(25609735-25609779)
chr2 (19-83)||(26484193-26484257)
chr2 (61-101)||(30990460-30990500)
chr2 (39-103)||(34339040-34339104)
chr2 (127-187)||(40776076-40776136)
chr2 (61-104)||(5045245-5045288)
chr2 (61-100)||(5133711-5133750)
chr2 (61-104)||(13866828-13866871)
chr2 (20-96)||(21280489-21280567)
chr2 (61-104)||(32098396-32098439)
chr2 (61-104)||(38239639-38239682)
chr2 (152-237)||(43985265-43985347)
chr2 (153-195)||(1494417-1494459)
chr2 (61-99)||(26522717-26522755)
chr2 (204-238)||(29430863-29430897)
chr2 (123-169)||(32757483-32757529)
chr2 (50-104)||(33197327-33197381)
chr2 (50-104)||(35329907-35329961)
chr2 (50-104)||(35459838-35459892)
chr2 (50-104)||(37053522-37053576)
chr2 (208-250)||(40837356-40837398)
chr2 (153-256)||(8017491-8017591)
chr2 (144-193)||(12785911-12785960)
chr2 (81-151)||(40145421-40145492)
chr2 (63-104)||(40837516-40837557)
chr2 (61-102)||(41240967-41241008)
chr2 (61-98)||(41809337-41809374)
[»] chr8 (23 HSPs)
chr8 (61-204)||(34770831-34770976)
chr8 (50-188)||(14482130-14482269)
chr8 (501-664)||(30276575-30276743)
chr8 (17-104)||(40356766-40356853)
chr8 (156-237)||(29973212-29973294)
chr8 (60-253)||(31915209-31915401)
chr8 (62-104)||(39392749-39392791)
chr8 (61-139)||(42597340-42597420)
chr8 (150-251)||(16162814-16162912)
chr8 (127-172)||(9912807-9912852)
chr8 (61-101)||(26215435-26215475)
chr8 (61-100)||(3936788-3936827)
chr8 (39-102)||(5226519-5226582)
chr8 (53-104)||(7008558-7008609)
chr8 (61-104)||(8062254-8062297)
chr8 (152-195)||(30987962-30988005)
chr8 (116-237)||(43393704-43393822)
chr8 (150-204)||(11569419-11569473)
chr8 (162-204)||(35534574-35534616)
chr8 (63-104)||(1470944-1470985)
chr8 (73-142)||(4762462-4762531)
chr8 (152-251)||(6875440-6875536)
chr8 (39-104)||(34563167-34563232)
[»] chr6 (27 HSPs)
chr6 (129-247)||(27857391-27857506)
chr6 (73-142)||(4006665-4006736)
chr6 (152-204)||(3738125-3738177)
chr6 (150-258)||(31624312-31624419)
chr6 (204-255)||(10016728-10016779)
chr6 (50-104)||(7713953-7714007)
chr6 (50-148)||(32975906-32976006)
chr6 (61-101)||(507159-507199)
chr6 (152-188)||(2767727-2767763)
chr6 (63-99)||(7354145-7354181)
chr6 (52-104)||(20671953-20672005)
chr6 (64-104)||(29269838-29269878)
chr6 (61-104)||(2456891-2456933)
chr6 (61-104)||(2514641-2514684)
chr6 (61-104)||(4420556-4420599)
chr6 (50-101)||(8349755-8349806)
chr6 (61-104)||(24774697-24774740)
chr6 (61-104)||(24836287-24836330)
chr6 (61-104)||(29274317-29274360)
chr6 (61-104)||(33787833-33787876)
chr6 (50-104)||(4248886-4248940)
chr6 (50-104)||(13360663-13360717)
chr6 (50-104)||(35095015-35095069)
chr6 (150-191)||(740861-740902)
chr6 (51-104)||(6654544-6654597)
chr6 (39-104)||(9732393-9732458)
chr6 (67-96)||(11784131-11784160)
[»] chr3 (35 HSPs)
chr3 (61-159)||(49465696-49465794)
chr3 (2-42)||(20143804-20143844)
chr3 (2-42)||(23269345-23269385)
chr3 (116-237)||(21872227-21872345)
chr3 (50-156)||(1816510-1816619)
chr3 (61-142)||(40122801-40122883)
chr3 (150-199)||(54180747-54180796)
chr3 (116-204)||(2100141-2100229)
chr3 (18-110)||(41159005-41159097)
chr3 (50-105)||(905057-905112)
chr3 (116-159)||(32582740-32582783)
chr3 (50-105)||(41028938-41028993)
chr3 (150-251)||(44014716-44014814)
chr3 (62-104)||(1395611-1395653)
chr3 (63-104)||(22232767-22232808)
chr3 (39-104)||(38462198-38462263)
chr3 (150-195)||(42817193-42817238)
chr3 (61-101)||(2128342-2128382)
chr3 (65-149)||(21865521-21865605)
chr3 (152-204)||(22748154-22748206)
chr3 (116-159)||(14548752-14548795)
chr3 (61-104)||(20192694-20192737)
chr3 (62-101)||(22214772-22214811)
chr3 (61-104)||(23793528-23793570)
chr3 (61-104)||(34958267-34958310)
chr3 (133-204)||(43046703-43046774)
chr3 (63-101)||(33882969-33883007)
chr3 (150-204)||(34707458-34707512)
chr3 (212-250)||(36832207-36832245)
chr3 (62-104)||(42084339-42084381)
chr3 (50-104)||(44374732-44374786)
chr3 (66-104)||(49587004-49587042)
chr3 (156-228)||(53735913-53735982)
chr3 (150-195)||(37273188-37273233)
chr3 (59-104)||(48364967-48365012)
[»] chr7 (41 HSPs)
chr7 (63-176)||(28340410-28340525)
chr7 (123-188)||(29574603-29574668)
chr7 (18-100)||(7513530-7513612)
chr7 (150-204)||(36537962-36538016)
chr7 (73-197)||(39591467-39591586)
chr7 (18-159)||(46056041-46056182)
chr7 (61-104)||(1417203-1417246)
chr7 (153-204)||(27626085-27626136)
chr7 (61-104)||(30496643-30496686)
chr7 (153-237)||(20547322-20547403)
chr7 (67-104)||(1792438-1792475)
chr7 (67-104)||(43318616-43318653)
chr7 (116-204)||(27517267-27517355)
chr7 (63-103)||(28178910-28178950)
chr7 (152-204)||(36598318-36598370)
chr7 (64-111)||(25511569-25511616)
chr7 (61-104)||(27121674-27121717)
chr7 (129-204)||(27508294-27508369)
chr7 (61-104)||(31341133-31341176)
chr7 (61-104)||(35536046-35536089)
chr7 (61-104)||(35808992-35809035)
chr7 (61-104)||(42656454-42656497)
chr7 (44-99)||(47006970-47007025)
chr7 (61-104)||(49060479-49060522)
chr7 (70-104)||(2999139-2999173)
chr7 (62-104)||(5006597-5006639)
chr7 (61-103)||(5272909-5272951)
chr7 (150-196)||(6857309-6857355)
chr7 (50-104)||(7244630-7244684)
chr7 (50-104)||(24973872-24973926)
chr7 (150-250)||(33894681-33894778)
chr7 (61-99)||(36874058-36874096)
chr7 (127-157)||(44821966-44821996)
chr7 (39-104)||(753292-753357)
chr7 (63-100)||(2727452-2727489)
chr7 (152-251)||(3610658-3610754)
chr7 (212-265)||(3968535-3968588)
chr7 (61-102)||(5373164-5373205)
chr7 (51-104)||(27481382-27481435)
chr7 (61-98)||(33894562-33894599)
chr7 (64-101)||(43152993-43153030)
[»] chr4 (40 HSPs)
chr4 (62-157)||(11802475-11802571)
chr4 (126-178)||(7730630-7730682)
chr4 (50-142)||(18630608-18630702)
chr4 (150-204)||(19304980-19305034)
chr4 (127-170)||(8147899-8147942)
chr4 (61-104)||(21593099-21593142)
chr4 (61-104)||(51044547-51044590)
chr4 (46-104)||(4071807-4071864)
chr4 (18-104)||(19422314-19422400)
chr4 (150-254)||(28615389-28615489)
chr4 (50-96)||(45128406-45128452)
chr4 (50-104)||(47970246-47970300)
chr4 (50-104)||(54325125-54325179)
chr4 (25-140)||(24160545-24160662)
chr4 (61-101)||(6364088-6364128)
chr4 (126-166)||(11262787-11262827)
chr4 (61-101)||(21683570-21683610)
chr4 (61-101)||(30338683-30338723)
chr4 (64-104)||(54277402-54277442)
chr4 (62-142)||(3155543-3155625)
chr4 (50-104)||(4191667-4191722)
chr4 (65-104)||(20936090-20936129)
chr4 (61-104)||(42321967-42322010)
chr4 (18-100)||(14011130-14011212)
chr4 (64-102)||(24929435-24929473)
chr4 (61-103)||(25487634-25487676)
chr4 (50-104)||(36734821-36734875)
chr4 (20-105)||(969432-969517)
chr4 (153-194)||(1075509-1075550)
chr4 (67-104)||(3662293-3662330)
chr4 (51-100)||(4471100-4471149)
chr4 (61-102)||(4798649-4798690)
chr4 (61-110)||(8422919-8422968)
chr4 (50-99)||(11264229-11264278)
chr4 (204-237)||(18512447-18512480)
chr4 (63-104)||(21953214-21953255)
chr4 (123-192)||(27623641-27623710)
chr4 (204-241)||(47970401-47970438)
chr4 (50-103)||(51555956-51556009)
chr4 (60-101)||(54575679-54575720)
[»] scaffold0654 (1 HSPs)
scaffold0654 (17-104)||(6725-6813)
[»] scaffold0014 (1 HSPs)
scaffold0014 (17-104)||(116644-116732)
[»] scaffold0590 (1 HSPs)
scaffold0590 (50-104)||(1162-1216)
[»] scaffold0275 (1 HSPs)
scaffold0275 (50-104)||(2759-2813)
[»] scaffold0024 (1 HSPs)
scaffold0024 (18-99)||(23807-23888)
[»] chr1 (37 HSPs)
chr1 (50-111)||(870973-871034)
chr1 (156-251)||(33759630-33759724)
chr1 (153-254)||(43420315-43420413)
chr1 (61-104)||(50319231-50319274)
chr1 (50-104)||(23895264-23895318)
chr1 (150-200)||(28689418-28689468)
chr1 (150-195)||(15579536-15579581)
chr1 (51-104)||(40357974-40358027)
chr1 (18-103)||(41638399-41638484)
chr1 (61-101)||(7028231-7028271)
chr1 (126-178)||(26293140-26293192)
chr1 (153-197)||(49521774-49521818)
chr1 (116-159)||(10581108-10581151)
chr1 (152-237)||(15581310-15581392)
chr1 (61-104)||(26184690-26184733)
chr1 (153-204)||(29723546-29723597)
chr1 (61-104)||(36151593-36151636)
chr1 (153-204)||(37811909-37811960)
chr1 (127-189)||(2035408-2035470)
chr1 (65-103)||(4276725-4276763)
chr1 (50-96)||(6659631-6659677)
chr1 (66-157)||(7218107-7218200)
chr1 (71-101)||(14332561-14332591)
chr1 (50-104)||(36602718-36602772)
chr1 (54-104)||(37175958-37176008)
chr1 (61-99)||(37591371-37591409)
chr1 (63-101)||(37841939-37841977)
chr1 (50-104)||(46499942-46499996)
chr1 (154-204)||(49692014-49692064)
chr1 (19-104)||(4202217-4202302)
chr1 (152-259)||(6292549-6292652)
chr1 (116-193)||(16980823-16980900)
chr1 (61-102)||(17420142-17420183)
chr1 (150-179)||(27145975-27146004)
chr1 (204-237)||(29793630-29793663)
chr1 (24-101)||(33339511-33339588)
chr1 (63-104)||(45999376-45999417)
[»] scaffold0508 (1 HSPs)
scaffold0508 (125-193)||(9772-9840)
[»] scaffold0091 (1 HSPs)
scaffold0091 (39-102)||(5936-5999)
[»] scaffold0053 (1 HSPs)
scaffold0053 (61-104)||(20118-20161)
[»] scaffold0110 (1 HSPs)
scaffold0110 (130-172)||(35813-35855)
[»] scaffold0020 (1 HSPs)
scaffold0020 (152-251)||(159891-159987)


Alignment Details
Target: chr5 (Bit Score: 734; Significance: 0; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 734; E-Value: 0
Query Start/End: Original strand, 18 - 797
Target Start/End: Complemental strand, 11095643 - 11094867
Alignment:
Q  18 tgtttggataaacaacttaactaaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtcaatgtttttcaggaa 117  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11095643 tgtttggataaacaacttaactaaacacttaccatataagtgattatgtataaactatttctataacaaatgatacaataaagtcaatgtttttcaggaa 11095544  T
Q  118 gctacaagttgttttcataagctattctggagaacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||    
T  11095543 gctacaagttgttttcataagctattctggagaacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa---gtgtttatgt 11095447  T
Q  218 cagtagataagcttaaataaaccagtccaaacagaccttaagtggtttggaatttctcttgagcagctgaaattactaacgataacaaggaatagaactc 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11095446 cagtagataagcttaaataaaccagtccaaacagaccttaagtggtttggaatttctcttgagcagctgaaattactaacgataacaaggaatagaactc 11095347  T
Q  318 taaacttcaggatataaagtatgtattttgaatgaatgtaacaagaaaagaaactgagtaattaacagatgagctaatatagtagtgcatggtggtgaaa 417  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11095346 taaacttcaggatataaagtatgtattttgcatgaatgtaacaagaaaagaaactgagtaattaacagatgagctaatatagtagtgcatggtggtgaaa 11095247  T
Q  418 atttgggatatagttaagtaaattatcatctaagtgcttttccagaacatggttttgaagagaatatacaaggtgtgatagtcataccgcaattcagaag 517  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11095246 atttgggatatagttaagtaaattatcatctaagtgcttttccagaacatggttttgaagagaatatacaaggtgtgatagtgataccgcaattcagaag 11095147  T
Q  518 accggcttcttgtcattcgttgatcggtaataaaccaggcctgcattgataatgaaacatctaatgagtatgaagatttattgaactaaggcttcagaaa 617  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11095146 accggcttcttgtcattcgttgatcggtaataaaccaggcctgcattgataatgaaacatctaatgagtatgaagatttattgaactaaggcttcagaaa 11095047  T
Q  618 agagtttgatgttaacataccttggccagaaacaagttactagattgcaattctctatcaacaggatctctgatgaaaattgataccaaactaagttaca 717  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11095046 agagtttgattttaacataccttggccagaaacaagttactagattgcaattctctatcaacaggatctctgatgaaaattgataccaaactaagttaca 11094947  T
Q  718 atattgaacaactttccaaattaaataaataactgtatttgtgaaagactacatcatttacctgattggaaaattgaaat 797  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11094946 atattgaacaactttccaaattaaataaattactgtatttgtgaaagaccacatcatttacctgattggaaaattgaaat 11094867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 127 - 195
Target Start/End: Complemental strand, 38047918 - 38047850
Alignment:
Q  127 tgttttcataagctattctggagaacttatggacatgtcataagctgtttccacaagttctctcaaaca 195  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| |||||||| ||| |||| ||||||    
T  38047918 tgttttcataagctatcctggagagcttatggacatgtcataagttgtttccataagctctcccaaaca 38047850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 36638644 - 36638719
Alignment:
Q  20 tttggataaacaacttaactaaacagttaccatataagagattatgtataaactatttctataacaaatgataaaa 95  Q
    |||||||||||||||||| ||| || ||| |||||| | | | ||||||||||||||||||||||||| |||||||    
T  36638644 tttggataaacaacttaattaagcacttatcatataggtgttaatgtataaactatttctataacaaaagataaaa 36638719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 104
Target Start/End: Complemental strand, 37063205 - 37063162
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  37063205 ttatgtataaactatttctataacaaaagataaaataaagtcaa 37063162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 20982277 - 20982223
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||| | |||||||||| |||||||||||||||| ||||||||||||||||    
T  20982277 catataagtgcttatgtataagctatttctataacaaaggataaaataaagtcaa 20982223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 237
Target Start/End: Complemental strand, 10125725 - 10125650
Alignment:
Q  159 acatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataa 237  Q
    |||||||||||| ||||| || ||||||||||| ||||| ||||||   ||| | ||||||||||||||||||||||||    
T  10125725 acatgtcataagttgtttacataagttctctcagacaatgtcacaa---gtgctcatgtcagtagataagcttaaataa 10125650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 40499848 - 40499764
Alignment:
Q  19 gtttggataaacaacttaactaaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtca 103  Q
    ||||||||||||||||||| ||||   ||| |||||||| | ||||||| ||  |||||||||||||||||||||| | ||||||    
T  40499848 gtttggataaacaacttaattaaaagcttatcatataagtgcttatgtacaagttatttctataacaaatgataaagtcaagtca 40499764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 104
Target Start/End: Complemental strand, 7096258 - 7096215
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||||| |||||||||||||||| ||||||||||||||||    
T  7096258 ttatgtataagctatttctataacaaaagataaaataaagtcaa 7096215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 104
Target Start/End: Complemental strand, 28586897 - 28586854
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||    
T  28586897 ttatgtatacactatttctataacaaaagataaaataaagtcaa 28586854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 62 - 251
Target Start/End: Original strand, 42646855 - 42647042
Alignment:
Q  62 tatgtataaactatttctataacaaatgataaaataaagtcaa--tgtttttcaggaagctacaagttgttttcataagctattctggagaacttatgga 159  Q
    |||||||||  ||||| ||||||||| |||||||| |||| ||  |||||||    |||||| ||| ||||||||||| | ||  |||||| |||||| |    
T  42646855 tatgtataagatatttttataacaaaggataaaattaagttaaattgtttttgtttaagctataaggtgttttcataaacgatcttggagagcttatgaa 42646954  T
Q  160 catgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaacag 251  Q
    ||||||||||||| ||| || |||||||  |||| | |    |  |||||| | ||||||||||||||||| |||||| ||| |||||||||    
T  42646955 catgtcataagctattttcataagttcttccaaatagt----cttcaagtgctaatgtcagtagataagctcaaataagccaatccaaacag 42647042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 4273393 - 4273339
Alignment:
Q  150 aacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa 204  Q
    ||||||| |||| ||||||||||||||||| | ||||||||||||||| ||||||    
T  4273393 aacttatagacaagtcataagctgtttccataggttctctcaaacaatctcacaa 4273339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 13224348 - 13224406
Alignment:
Q  41 aacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaa 99  Q
    |||||||| |||| ||| | |||||||||| |||||||||||||||| |||||||||||    
T  13224348 aacagttatcatagaagtgcttatgtataagctatttctataacaaaagataaaataaa 13224406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 204 - 258
Target Start/End: Original strand, 29013112 - 29013166
Alignment:
Q  204 acaagtgtttatgtcagtagataagcttaaataaaccagtccaaacagaccttaa 258  Q
    ||||||||||||| ||| |||||||||| ||||| ||| ||||||||||||||||    
T  29013112 acaagtgtttatgccagcagataagcttcaataatccaatccaaacagaccttaa 29013166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 32172581 - 32172635
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||| ||||| |||||||||||||||||||| |||||| |||||||| |||||||    
T  32172581 catacaagagcttatgtataaactatttctacaacaaaagataaaatgaagtcaa 32172635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 101
Target Start/End: Original strand, 34975315 - 34975357
Alignment:
Q  59 gattatgtataaactatttctataacaaatgataaaataaagt 101  Q
    ||||||||||||||||||||||||||||| ||| |||||||||    
T  34975315 gattatgtataaactatttctataacaaaagatgaaataaagt 34975357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 35095925 - 35095871
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||| | |||| | |||||||||||||||||||| ||||||||||||||||    
T  35095925 catataagtgcttatatttaaactatttctataacaaaagataaaataaagtcaa 35095871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 35135804 - 35135750
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||| | ||||||||||  ||||||||||||||| ||||||||||||||||    
T  35135804 catataagtgtttatgtataagatatttctataacaaaagataaaataaagtcaa 35135750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 251
Target Start/End: Original strand, 10640019 - 10640105
Alignment:
Q  161 atgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaacag 251  Q
    |||||||||||||||| || |||||||| ||||||||||||||| |     |||||||||||||||| || |||||| | | |||||||||    
T  10640019 atgtcataagctgttttcataagttctcccaaacaatatcacaaaa----cttatgtcagtagataaactcaaataagctaatccaaacag 10640105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 159
Target Start/End: Original strand, 16889674 - 16889774
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa--tgtttttcaggaagctacaagttgttttcataagctattctggagaacttatgg 158  Q
    |||||||||| ||||||| |||||||| |||||| | |||||||  |||||||   ||||||| ||| |||||||||||||||| || ||||  ||||||    
T  16889674 ttatgtataagctatttccataacaaaagataaacttaagtcaaactgtttttatagaagctataagctgttttcataagctatgctagagagtttatgg 16889773  T
Q  159 a 159  Q
    |    
T  16889774 a 16889774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 249
Target Start/End: Complemental strand, 39257359 - 39257314
Alignment:
Q  204 acaagtgtttatgtcagtagataagcttaaataaaccagtccaaac 249  Q
    ||||||| |||||| ||||||||||||||||||| |||||||||||    
T  39257359 acaagtgcttatgttagtagataagcttaaataagccagtccaaac 39257314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 101
Target Start/End: Original strand, 6593239 - 6593279
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagt 101  Q
    |||||||||||| |||||||||||||| |||||||||||||    
T  6593239 ttatgtataaacaatttctataacaaaagataaaataaagt 6593279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 10303747 - 10303783
Alignment:
Q  68 taaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||||||||||||||| ||||||||||||||||    
T  10303747 taaactatttctataacaaaagataaaataaagtcaa 10303783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 101
Target Start/End: Complemental strand, 12407792 - 12407752
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagt 101  Q
    |||||||||| |||||||||||||||| |||||||||||||    
T  12407792 ttatgtataagctatttctataacaaaagataaaataaagt 12407752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 148
Target Start/End: Original strand, 35960353 - 35960441
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaatgtttttca-ggaagctacaagttgttttcataagctattctgga 148  Q
    ||||| ||||||||||||||||| ||| ||||||||||||||||  | |||||   || ||| |||||| ||||||||||||| |||||    
T  35960353 ttatgcataaactatttctataataaaagataaaataaagtcaaactatttcatataaactataagttgatttcataagctatcctgga 35960441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 250
Target Start/End: Original strand, 41419385 - 41419470
Alignment:
Q  161 atgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaaca 250  Q
    |||||||||||||||| |||||||| || |||||||| |||||| |    ||||||||||||||| |||| ||||||  || ||||||||    
T  41419385 atgtcataagctgttttcacaagttatcccaaacaatctcacaaaa----tttatgtcagtagattagctcaaataagtcaatccaaaca 41419470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 101
Target Start/End: Original strand, 7853602 - 7853637
Alignment:
Q  66 tataaactatttctataacaaatgataaaataaagt 101  Q
    |||||||||||||||||||||| |||||||||||||    
T  7853602 tataaactatttctataacaaaagataaaataaagt 7853637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 104
Target Start/End: Original strand, 11667102 - 11667145
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    ||||| |||||||||||| |||||||| ||||||||||||||||    
T  11667102 ttatgcataaactatttcaataacaaaggataaaataaagtcaa 11667145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 193
Target Start/End: Original strand, 14364276 - 14364319
Alignment:
Q  150 aacttatggacatgtcataagctgtttccacaagttctctcaaa 193  Q
    |||||||||||||||||||||||||||||| ||| | |||||||    
T  14364276 aacttatggacatgtcataagctgtttccataagctttctcaaa 14364319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 159
Target Start/End: Complemental strand, 37588434 - 37588391
Alignment:
Q  116 aagctacaagttgttttcataagctattctggagaacttatgga 159  Q
    |||||| |||||||||||||||| ||||||||||| ||||||||    
T  37588434 aagctataagttgttttcataagttattctggagagcttatgga 37588391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 104
Target Start/End: Original strand, 39128578 - 39128621
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||    
T  39128578 ttatgtataagctaattctataacaaaagataaaataaagtcaa 39128621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 9860940 - 9860886
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    ||||||||  ||||||||||| ||||||||| ||||||||| |||||||| ||||    
T  9860940 catataagttattatgtataagctatttctagaacaaatgacaaaataaaatcaa 9860886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 19460039 - 19460101
Alignment:
Q  39 taaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagt 101  Q
    |||||| |||||||||||| | |||| |||| |||| || ||||||||| |||||||||||||    
T  19460039 taaacatttaccatataagtgcttatctatacactacttttataacaaaagataaaataaagt 19460101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 204 - 258
Target Start/End: Original strand, 24085127 - 24085181
Alignment:
Q  204 acaagtgtttatgtcagtagataagcttaaataaaccagtccaaacagaccttaa 258  Q
    |||||||||||||||||| | |||||||  |||| ||| ||||||||||||||||    
T  24085127 acaagtgtttatgtcagtcggtaagcttctataatccaatccaaacagaccttaa 24085181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 103
Target Start/End: Original strand, 34690813 - 34690855
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtca 103  Q
    |||||||||  |||||||||||||||| |||||||||||||||    
T  34690813 ttatgtatacgctatttctataacaaaagataaaataaagtca 34690855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 154
Target Start/End: Original strand, 41534381 - 41534475
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaatgtttttca-ggaagctacaagttgttttcataagctattctggagaactt 154  Q
    ||||||| || |||||| | |||||||  |||||||||||  ||  | ||||| |||||||| ||||||||||||||||||||| | ||||||||    
T  41534381 ttatgtacaagctatttatgtaacaaaaaataaaataaagctaaattgtttcatggaagctataagttgttttcataagctatttttgagaactt 41534475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 250
Target Start/End: Original strand, 41534506 - 41534589
Alignment:
Q  163 gtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaaca 250  Q
    |||||||||||||| |||||||| || |||||||| |||||| |    ||||||||||||||| |||| ||||||  || ||||||||    
T  41534506 gtcataagctgttttcacaagttatcccaaacaatctcacaaaa----tttatgtcagtagattagctcaaataagtcaatccaaaca 41534589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 3970812 - 3970767
Alignment:
Q  61 ttatgtataaactatttctataaca-aatgataaaataaagtcaat 105  Q
    ||||| ||||||||||||||||||| || |||||||||||||||||    
T  3970812 ttatggataaactatttctataacacaaagataaaataaagtcaat 3970767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 10280614 - 10280570
Alignment:
Q  150 aacttatggacatgtcataagctgtttccacaagttctctcaaaca 195  Q
    ||||||||||||| |||||||||||||||| ||||||| |||||||    
T  10280614 aacttatggacat-tcataagctgtttccataagttctttcaaaca 10280570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 98
Target Start/End: Complemental strand, 12460131 - 12460094
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataa 98  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  12460131 ttatgtataagctatttctataacaaaagataaaataa 12460094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 17756435 - 17756386
Alignment:
Q  123 aagttgttttcataagctattctggagaacttatggacatgtcataagct 172  Q
    ||||||||||||||||  ||  |||| |||||||||||||||||||||||    
T  17756435 aagttgttttcataagtgatcttggacaacttatggacatgtcataagct 17756386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 26516226 - 26516275
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaataaa 99  Q
    |||||||| | |||||||||| ||||||||| |||||| |||||||||||    
T  26516226 catataagtgcttatgtataagctatttctaaaacaaaagataaaataaa 26516275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 29117063 - 29117018
Alignment:
Q  59 gattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||||||   ||||||||||||||| ||||||||||||||||    
T  29117063 gattatgtatatgttatttctataacaaaagataaaataaagtcaa 29117018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 6e-24; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 50 - 258
Target Start/End: Complemental strand, 28803648 - 28803441
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa--tgtttttcaggaagctacaagttgttttcataagctattctgg 147  Q
    |||||||| | |||| |||||  |||||| |||||||| ||||||||||||||||  || |||     |||||||||||||||||| ||| |||| ||||    
T  28803648 catataagtgcttatatataagttatttcgataacaaaagataaaataaagtcaaactgatttcatataagctacaagttgttttcttaaactatcctgg 28803549  T
Q  148 agaacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaa 247  Q
    ||| ||||||||||||||||||| |||||||| | ||||||||||||| | ||   ||| ||| ||||| | ||||||||||| ||||||  || |||||    
T  28803548 agagcttatggacatgtcataagttgtttccatatgttctctcaaacagtctc---acatgtgcttatgccggtagataagctcaaataagtcaatccaa 28803452  T
Q  248 acagaccttaa 258  Q
    | || ||||||    
T  28803451 ataggccttaa 28803441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 50 - 149
Target Start/End: Complemental strand, 17952843 - 17952742
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaatgt-ttttca-ggaagctacaagttgttttcataagctattctgg 147  Q
    |||||||||| |||| ||||| |||||||||||||||| ||||||||||||||||  | ||||||   |||||||||| |||||||||||||||| ||||    
T  17952843 catataagagcttatatataagctatttctataacaaaagataaaataaagtcaaactattttcatataagctacaagatgttttcataagctatcctgg 17952744  T
Q  148 ag 149  Q
    ||    
T  17952743 ag 17952742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 195
Target Start/End: Original strand, 10143111 - 10143247
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa--tgtttttcaggaagctacaagttgttttcataagctattctggagaacttatgg 158  Q
    ||||||||||  ||||||||||||||| |||||||| |||||||  |||||||    |||||| ||||| ||||||||||||||  ||||||  ||||||    
T  10143111 ttatgtataagttatttctataacaaaagataaaattaagtcaaactgtttttatataagctataagtttttttcataagctatcatggagagtttatgg 10143210  T
Q  159 acatgtcataagctgtttccacaagttctctcaaaca 195  Q
    | |||||||||  |||| ||| || ||||| ||||||    
T  10143211 atatgtcataaattgttcccataaattctcccaaaca 10143247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 250
Target Start/End: Original strand, 4350747 - 4350841
Alignment:
Q  153 ttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaaca 250  Q
    ||||| |||||||||||||||||| || ||||||||||||||||| ||     ||||| ||||||||||||| ||||| |||||| ||| ||||||||    
T  4350747 ttatgaacatgtcataagctgttttcataagttctctcaaacaatctc---ttaagtgcttatgtcagtagagaagctcaaataagccaatccaaaca 4350841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 250
Target Start/End: Original strand, 787388 - 787483
Alignment:
Q  152 cttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaaca 250  Q
    ||||||||||||||||||||||||| || |||||||| |||||| | ||   ||||||| ||||| ||||||||| |||  ||||| ||| ||||||||    
T  787388 cttatggacatgtcataagctgttttcataagttctcacaaacagtgtc---acaagtgcttatgccagtagatatgctcgaataatccaatccaaaca 787483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 1801724 - 1801776
Alignment:
Q  152 cttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa 204  Q
    |||||| |||||||||||||||||| || |||||||| |||||||||||||||    
T  1801724 cttatgaacatgtcataagctgttttcataagttctcccaaacaatatcacaa 1801776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 104
Target Start/End: Original strand, 37033983 - 37034026
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||    
T  37033983 ttatgtataaactatttctataaaaaaagataaaataaagtcaa 37034026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 40400900 - 40400818
Alignment:
Q  166 ataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaacag 251  Q
    ||||||||||| || ||||| | ||||||||| ||||||   || |||||||||||||||| |||||||||| ||| |||||||||    
T  40400900 ataagctgttttcataagttttttcaaacaatgtcacaa---gtctttatgtcagtagataggcttaaataagccaatccaaacag 40400818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 10190202 - 10190256
Alignment:
Q  45 gttaccatataagagattatgtataaactatttctataacaaatgataaaataaa 99  Q
    |||| |||||||| | ||||||||||||||||| ||||||||| |||||||||||    
T  10190202 gttatcatataagtgcttatgtataaactatttttataacaaaggataaaataaa 10190256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 31461366 - 31461420
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||| | |||| ||||| |||||||||||||||| ||||||||||||||||    
T  31461366 catataagtggttatatataagctatttctataacaaaagataaaataaagtcaa 31461420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 10150651 - 10150772
Alignment:
Q  18 tgtttggataaacaacttaactaaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaag-tcaatgtttttca-gg 115  Q
    ||||| |||||||||||||| ||| || |||  ||||||| | ||||||||||  ||||||||||| ||| |||||||||| | | |||| ||||||  |    
T  10150651 tgtttagataaacaacttaattaagcacttattatataagtgtttatgtataagttatttctataataaaagataaaataacgttaaatggttttcatag 10150750  T
Q  116 aagctacaagttgttttcataa 137  Q
    ||  ||||||||||||||||||    
T  10150751 aatttacaagttgttttcataa 10150772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 102
Target Start/End: Original strand, 12215746 - 12215787
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtc 102  Q
    |||||||||||||||||||| |||||| ||||||||||||||    
T  12215746 ttatgtataaactatttctacaacaaaagataaaataaagtc 12215787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 111
Target Start/End: Original strand, 13864578 - 13864639
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaatgttttt 111  Q
    |||||||| | |||||||||| |||||||||||||||| | |||||||||||| || |||||    
T  13864578 catataagtgtttatgtataagctatttctataacaaaaggtaaaataaagtcgattttttt 13864639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 25609735 - 25609779
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaat 105  Q
    |||||||||| |||||||||||| ||| |||||||||||||||||    
T  25609735 ttatgtataagctatttctataagaaaagataaaataaagtcaat 25609779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 26484257 - 26484193
Alignment:
Q  19 gtttggataaacaacttaactaaacagttaccatataagagattatgtataaactatttctataa 83  Q
    ||||||||||||||||||| ||| || ||| |||||||| | ||||| |||| ||||||||||||    
T  26484257 gtttggataaacaacttaattaatcatttatcatataagtgcttatggataagctatttctataa 26484193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 101
Target Start/End: Complemental strand, 30990500 - 30990460
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagt 101  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  30990500 ttatgtataagctctttctataacaaatgataaaataaagt 30990460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 34339040 - 34339104
Alignment:
Q  39 taaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtca 103  Q
    |||||| ||| |||||||| | ||||||||||||| |||||||| | || |||||||||||||||    
T  34339040 taaacacttatcatataagtgcttatgtataaactttttctatagctaaagataaaataaagtca 34339104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 40776136 - 40776076
Alignment:
Q  127 tgttttcataagctattctggagaacttatggacatgtcataagctgtttccacaagttct 187  Q
    ||||||||||| |||||| ||||| |||||| | |||||||||||||||| || |||||||    
T  40776136 tgttttcataatctattccggagagcttatgcatatgtcataagctgttttcataagttct 40776076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 104
Target Start/End: Complemental strand, 5045288 - 5045245
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||||| |||||| ||||||||| ||||||||||||||||    
T  5045288 ttatgtataagctatttttataacaaaagataaaataaagtcaa 5045245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 100
Target Start/End: Original strand, 5133711 - 5133750
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaag 100  Q
    |||||||||| |||||||||||||||| ||||||||||||    
T  5133711 ttatgtataagctatttctataacaaaagataaaataaag 5133750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 104
Target Start/End: Original strand, 13866828 - 13866871
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||||||||||||||||| |||| |||||||| |||||||    
T  13866828 ttatgtataaactatttctatagcaaaagataaaattaagtcaa 13866871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 21280567 - 21280489
Alignment:
Q  20 tttggataaacaacttaactaaacagttacca--tataagagattatgtataaactatttctataacaaatgataaaat 96  Q
    |||||||||||||||||||||||||||||| |  ||||||   ||||| |||| ||||||||||| | || ||||||||    
T  21280567 tttggataaacaacttaactaaacagttacaagctataagcacttatgcataagctatttctataccgaaagataaaat 21280489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 104
Target Start/End: Complemental strand, 32098439 - 32098396
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||| ||||| |||||||||||||||| ||||||||||||||||    
T  32098439 ttatatataagctatttctataacaaaagataaaataaagtcaa 32098396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 104
Target Start/End: Complemental strand, 38239682 - 38239639
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||||| |||||||||||||||| |||||||| |||||||    
T  38239682 ttatgtataagctatttctataacaaaagataaaatcaagtcaa 38239639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 237
Target Start/End: Original strand, 43985265 - 43985347
Alignment:
Q  152 cttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataa 237  Q
    ||||||||||||||||||| ||||||   ||  ||||||||||| | | ||||   |||||||||||||||||||| |||||||||    
T  43985265 cttatggacatgtcataagttgtttcagtaatctctctcaaacagttttacaa---gtgtttatgtcagtagataaacttaaataa 43985347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 195
Target Start/End: Complemental strand, 1494459 - 1494417
Alignment:
Q  153 ttatggacatgtcataagctgtttccacaagttctctcaaaca 195  Q
    |||||||||||||||||||||||| || ||| |||||||||||    
T  1494459 ttatggacatgtcataagctgttttcataagctctctcaaaca 1494417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 99
Target Start/End: Complemental strand, 26522755 - 26522717
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaa 99  Q
    ||||||||||||||||||||||||||| |||| ||||||    
T  26522755 ttatgtataaactatttctataacaaaagatataataaa 26522717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 204 - 238
Target Start/End: Original strand, 29430863 - 29430897
Alignment:
Q  204 acaagtgtttatgtcagtagataagcttaaataaa 238  Q
    ||||||||||||||||||||||||||| |||||||    
T  29430863 acaagtgtttatgtcagtagataagctcaaataaa 29430897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 169
Target Start/End: Complemental strand, 32757529 - 32757483
Alignment:
Q  123 aagttgttttcataagctattctggagaacttatggacatgtcataa 169  Q
    |||||||||||||||| |||  |||||| ||||||||||||||||||    
T  32757529 aagttgttttcataagatatcatggagagcttatggacatgtcataa 32757483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 33197381 - 33197327
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||| | |||| ||||| |||||||||||||||| |||| |||||||||||    
T  33197381 catataagtgcttatctataagctatttctataacaaaagatagaataaagtcaa 33197327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 35329961 - 35329907
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||| | ||||| |||||||||||| |||||| | ||||||||||||||||    
T  35329961 catataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 35329907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 35459838 - 35459892
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||| |||| ||||||| |||||| |||| |||| ||||||||||||||||    
T  35459838 catataagtgattttgtataagctatttgtataccaaaagataaaataaagtcaa 35459892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 37053522 - 37053576
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||| | ||||||||| ||||||||||||||| |  |||||||||||||||    
T  37053522 catataagtgcttatgtatagactatttctataacagaaaataaaataaagtcaa 37053576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 208 - 250
Target Start/End: Complemental strand, 40837398 - 40837356
Alignment:
Q  208 gtgtttatgtcagtagataagcttaaataaaccagtccaaaca 250  Q
    ||||||||||||||||||||||| |||||| ||| ||||||||    
T  40837398 gtgtttatgtcagtagataagctcaaataagccaatccaaaca 40837356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 256
Target Start/End: Original strand, 8017491 - 8017591
Alignment:
Q  153 ttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaacaga 252  Q
    ||||| |||| ||||||||||||| || |||||||| |||| |||  |   ||||||| |||||||| ||||||| || ||||||  || ||||||||||    
T  8017491 ttatgaacatatcataagctgttttcataagttctcccaaataatcgc---acaagtgcttatgtcaatagataacctcaaataagtcaatccaaacaga 8017587  T
Q  253 cctt 256  Q
    ||||    
T  8017588 cctt 8017591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 12785911 - 12785960
Alignment:
Q  144 ctggagaacttatggacatgtcataagctgtttccacaagttctctcaaa 193  Q
    |||||||||||||||||||||| |||| |||||||  ||| |||||||||    
T  12785911 ctggagaacttatggacatgtcgtaagttgtttccgtaagctctctcaaa 12785960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 40145421 - 40145492
Alignment:
Q  81 taacaaatgataaaataaagtcaa--tgtttttcaggaagctacaagttgttttcataagctattctggagaa 151  Q
    ||||||| ||||||||||||||||  |||||||  | ||| || |||||||||||||||||| ||||||||||    
T  40145421 taacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagct-ttctggagaa 40145492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 104
Target Start/End: Complemental strand, 40837557 - 40837516
Alignment:
Q  63 atgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||| |||||||||||||||| |||||| |||||||||    
T  40837557 atgtataagctatttctataacaaaagataaattaaagtcaa 40837516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 102
Target Start/End: Complemental strand, 41241008 - 41240967
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtc 102  Q
    |||||||||||||||| ||||||||||  |||||||||||||    
T  41241008 ttatgtataaactattcctataacaaaatataaaataaagtc 41240967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 98
Target Start/End: Complemental strand, 41809374 - 41809337
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataa 98  Q
    ||||||||||||||||||||||||||| || |||||||    
T  41809374 ttatgtataaactatttctataacaaaagaaaaaataa 41809337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 9e-20; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 61 - 204
Target Start/End: Original strand, 34770831 - 34770976
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa--tgtttttcaggaagctacaagttgttttcataagctattctggagaacttatgg 158  Q
    ||||||| |||||||||| || ||||| ||||||||||||||||  ||||||     |||||| |||||||||||||||||||| || ||||  | ||||    
T  34770831 ttatgtaaaaactatttccattacaaaagataaaataaagtcaaattgttttcatttaagctataagttgttttcataagctatcctagagagttcatgg 34770930  T
Q  159 acatgtcataagctgtttccacaagttctctcaaacaatatcacaa 204  Q
    |||||||||||||||||| || | | ||||||||||| | ||||||    
T  34770931 acatgtcataagctgttttcataggatctctcaaacagtttcacaa 34770976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 14482130 - 14482269
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa--tgtttttcaggaagctacaagttgttttcataagctattctgg 147  Q
    |||||||| | ||||||||||||||||||||||||||| ||||||||||||||||  |||||||     | ||  |||||||||||| |||||||  ||     
T  14482130 catataagtgcttatgtataaactatttctataacaaaagataaaataaagtcaaattgttttttttacatct-taagttgttttcacaagctatcatga 14482228  T
Q  148 agaacttatggacatgtcataagctgtttccacaagttctc 188  Q
    ||| ||||||||||||| |||||| ||||||| ||| ||||    
T  14482229 agagcttatggacatgtgataagccgtttccataagctctc 14482269  T

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Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 501 - 664
Target Start/End: Original strand, 30276575 - 30276743
Alignment:
Q  501 ataccgcaattcagaagaccggcttcttgtcattcgttgatcggtaataaaccaggcctgcattgataatgaaacatctaatgagtat-gaagatttatt 599  Q
    ||||| |||||||||||| || ||||||||||||||||||||| | | |||||| ||||||||| |||| |||  ||| ||| |  || ||||  || ||    
T  30276575 atacctcaattcagaagatcgacttcttgtcattcgttgatcgcttagaaaccaagcctgcattaataacgaa--atcaaatcaacatggaagtcttgtt 30276672  T
Q  600 gaactaaggcttcaga------aaagagtttgatgttaacataccttggccagaaacaagttactagattg 664  Q
    |||| || ||||||||      |||||||||||||| | || |||||||| ||||||||||||||||||||    
T  30276673 gaaccaatgcttcagattcagcaaagagtttgatgtaagcaaaccttggcaagaaacaagttactagattg 30276743  T

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Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 40356766 - 40356853
Alignment:
Q  17 ttgtttggataaacaacttaactaaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    ||||||| ||||||||||||| |||||| ||  |||||||| | |||| ||||| |||||| ||||| ||| ||||||||||||||||    
T  40356766 ttgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaa 40356853  T

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Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 29973212 - 29973294
Alignment:
Q  156 tggacatgtcataagctgtttccacaagttctctcaaacaatatcac-aacaagtgtttatgtcagtagataagcttaaataa 237  Q
    |||||||||  |||| |||||||| ||| ||||||||||||| |||| |||||||| ||||||||||| ||||||| ||||||    
T  29973212 tggacatgttgtaagttgtttccataagctctctcaaacaatgtcacgaacaagtgcttatgtcagtaaataagctaaaataa 29973294  T

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Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 253
Target Start/End: Complemental strand, 31915401 - 31915209
Alignment:
Q  60 attatgtataaactatttctataacaaatgataaaataaagtcaa--tgtttttcaggaagctacaagttgttttcataagctattctggagaacttatg 157  Q
    ||||||||||| |||| ||||||||||| |||| |||||||||||  ||||||     ||| || ||| ||| ||  |||||||| ||||||| ||||||    
T  31915401 attatgtataagctatatctataacaaaagatagaataaagtcaaattgttttcatacaaggtataagatgtctttgtaagctatcctggagagcttatg 31915302  T
Q  158 gacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaacagac 253  Q
    ||| ||||||||| |||||  | ||| | ||||||||| | ||||||   || ||||||| | ||||||| || || |||| ||||||||||||||    
T  31915301 gacttgtcataagttgtttgtataagctttctcaaacagtctcacaa---gtatttatgtgaatagataaactcaagtaaatcagtccaaacagac 31915209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 39392791 - 39392749
Alignment:
Q  62 tatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  39392791 tatgtataaactatttctataacaaaagataaaataaagtcaa 39392749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 61 - 139
Target Start/End: Original strand, 42597340 - 42597420
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa--tgtttttcaggaagctacaagttgttttcataagc 139  Q
    |||||||||| |||||||||||||||| ||||||||||||| ||  ||||||   | |||||| |||||||||||||||||    
T  42597340 ttatgtataagctatttctataacaaaagataaaataaagtaaaattgttttcatgcaagctataagttgttttcataagc 42597420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 251
Target Start/End: Original strand, 16162814 - 16162912
Alignment:
Q  150 aacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaac 249  Q
    |||||||| ||| |||||||||||||| || ||||| ||||||||| | ||   |||||||||||||  ||||||||| || |||||| ||| |||||||    
T  16162814 aacttatgaacaggtcataagctgttttcataagttttctcaaacagtctc---acaagtgtttatgctagtagataaactcaaataagccaatccaaac 16162910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 9912852 - 9912807
Alignment:
Q  127 tgttttcataagctattctggagaacttatggacatgtcataagct 172  Q
    ||||||| |||||||| ||||||| |||||||||||||||||||||    
T  9912852 tgttttcctaagctatcctggagagcttatggacatgtcataagct 9912807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 101
Target Start/End: Original strand, 26215435 - 26215475
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagt 101  Q
    |||||||||| |||||||||||||||| |||||||||||||    
T  26215435 ttatgtataagctatttctataacaaaagataaaataaagt 26215475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 100
Target Start/End: Original strand, 3936788 - 3936827
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaag 100  Q
    |||||||||| |||||||||||||||| ||||||||||||    
T  3936788 ttatgtataatctatttctataacaaaggataaaataaag 3936827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 102
Target Start/End: Original strand, 5226519 - 5226582
Alignment:
Q  39 taaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtc 102  Q
    |||||| ||| |||||||| | |||||||||||| ||||| |||||||| |||||||| |||||    
T  5226519 taaacatttatcatataagtgtttatgtataaacaatttcaataacaaaagataaaatcaagtc 5226582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 104
Target Start/End: Original strand, 7008558 - 7008609
Alignment:
Q  53 ataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||| ||||| ||||||| |||||||||||||||  ||||||||||||||||    
T  7008558 ataaaagattttgtataatctatttctataacaatggataaaataaagtcaa 7008609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 104
Target Start/End: Original strand, 8062254 - 8062297
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    ||||||||| ||  ||||||||||||||||||||||||||||||    
T  8062254 ttatgtatacaccctttctataacaaatgataaaataaagtcaa 8062297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 195
Target Start/End: Complemental strand, 30988005 - 30987962
Alignment:
Q  152 cttatggacatgtcataagctgtttccacaagttctctcaaaca 195  Q
    ||||||||||||||||||| |||||||| ||| |||||||||||    
T  30988005 cttatggacatgtcataagttgtttccataagctctctcaaaca 30987962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 237
Target Start/End: Complemental strand, 43393822 - 43393704
Alignment:
Q  116 aagctacaagttgttttcataagctattctggagaacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttat 215  Q
    |||||| ||| | ||||||||||||||| |||||| ||||||  ||||||||||| ||| || | ||| |||| |||||| | ||   | |||||||| |    
T  43393822 aagctataagcttttttcataagctattatggagagcttatgctcatgtcataagttgtatctataagctctcccaaacagtctc---aaaagtgttttt 43393726  T
Q  216 gtcagtagataagcttaaataa 237  Q
    |  |||||||||||||||||||    
T  43393725 gcaagtagataagcttaaataa 43393704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 11569473 - 11569419
Alignment:
Q  150 aacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa 204  Q
    |||||||| ||||||||||||||||||||| ||| ||||| ||||| | ||||||    
T  11569473 aacttatgtacatgtcataagctgtttccataagctctcttaaacagtctcacaa 11569419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 204
Target Start/End: Complemental strand, 35534616 - 35534574
Alignment:
Q  162 tgtcataagctgtttccacaagttctctcaaacaatatcacaa 204  Q
    ||||||||||||||| |||||||||||||||||| | ||||||    
T  35534616 tgtcataagctgttttcacaagttctctcaaacagtctcacaa 35534574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 104
Target Start/End: Complemental strand, 1470985 - 1470944
Alignment:
Q  63 atgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||| |||||||||||| ||| ||||||||||||||||    
T  1470985 atgtataagctatttctataataaaagataaaataaagtcaa 1470944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 142
Target Start/End: Original strand, 4762462 - 4762531
Alignment:
Q  73 tatttctataacaaatgataaaataaagtcaatgtttttcaggaagctacaagttgttttcataagctat 142  Q
    ||||||||| ||||| ||| ||||||||||| | |||||    ||||| |||||||||||||||||||||    
T  4762462 tatttctattacaaaagatgaaataaagtcattttttttataaaagcttcaagttgttttcataagctat 4762531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 251
Target Start/End: Complemental strand, 6875536 - 6875440
Alignment:
Q  152 cttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaacag 251  Q
    |||||| |||| |||||| |||||| || | |||||| |||||| ||||||||    ||  ||| ||||||||||||||||||||||||| | |||||||    
T  6875536 cttatgaacatatcataatctgttttcatatgttctcccaaacattatcacaaa---tgcctatatcagtagataagcttaaataaaccaattcaaacag 6875440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 104
Target Start/End: Original strand, 34563167 - 34563232
Alignment:
Q  39 taaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||| ||| |||||||| | |||| |||||  ||||||||| ||||| ||||||||||||||||    
T  34563167 taaacatttatcatataagtgcttatatataagttatttctatgacaaaggataaaataaagtcaa 34563232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 1e-18; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 129 - 247
Target Start/End: Original strand, 27857391 - 27857506
Alignment:
Q  129 ttttcataagctattctggagaacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataag 228  Q
    ||||||||||||||  |||||| |||||||| |||||||||| ||||| || ||| |||| |||||| | ||   |||||||| |||||||||||||||     
T  27857391 ttttcataagctatcatggagagcttatggagatgtcataagttgttttcataagctctcccaaacagtttc---acaagtgtctatgtcagtagataaa 27857487  T
Q  229 cttaaataaaccagtccaa 247  Q
    || ||||||||||||||||    
T  27857488 ctcaaataaaccagtccaa 27857506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 73 - 142
Target Start/End: Original strand, 4006665 - 4006736
Alignment:
Q  73 tatttctataacaaatgataaaataaagtcaa--tgtttttcaggaagctacaagttgttttcataagctat 142  Q
    ||||||||||||||||||||||||||||||||  |||||||    |||||| ||||||||||||||||||||    
T  4006665 tatttctataacaaatgataaaataaagtcaaattgtttttatataagctataagttgttttcataagctat 4006736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 3738125 - 3738177
Alignment:
Q  152 cttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa 204  Q
    |||||||||||||||||||||||||||||||| ||| ||||||| | ||||||    
T  3738125 cttatggacatgtcataagctgtttccacaagatctttcaaacagtctcacaa 3738177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 258
Target Start/End: Original strand, 31624312 - 31624419
Alignment:
Q  150 aacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaac 249  Q
    |||||||||||||||||| |||||||| || || ||||  |||||| | || ||| ||  | ||||||||||| ||||||| |||||| ||| |||||||    
T  31624312 aacttatggacatgtcatgagctgttttcataaattctaccaaacagtctctcaa-aacagcttatgtcagtatataagctcaaataagccaatccaaac 31624410  T
Q  250 agaccttaa 258  Q
    |||||||||    
T  31624411 agaccttaa 31624419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 204 - 255
Target Start/End: Original strand, 10016728 - 10016779
Alignment:
Q  204 acaagtgtttatgtcagtagataagcttaaataaaccagtccaaacagacct 255  Q
    ||||||||||||| | ||||||||||| |||||||||| |||||||||||||    
T  10016728 acaagtgtttatgcctgtagataagctcaaataaaccaatccaaacagacct 10016779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 7713953 - 7714007
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||||| |||||||||||||| ||  |||||||| ||||||||||||||||    
T  7713953 catataagagcttatgtataaactactttcataacaaaagataaaataaagtcaa 7714007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 148
Target Start/End: Original strand, 32975906 - 32976006
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaatgtttttca--ggaagctacaagttgttttcataagctattctgg 147  Q
    |||||||| | ||||||||||  ||||||| |||||||  |||||||||||||||  | |||||   ||||| | |||||||||||||||||||| ||||    
T  32975906 catataagtgtttatgtataagttatttctgtaacaaaatataaaataaagtcaaactgtttcaatagaagcaataagttgttttcataagctatcctgg 32976005  T
Q  148 a 148  Q
    |    
T  32976006 a 32976006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 101
Target Start/End: Original strand, 507159 - 507199
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagt 101  Q
    ||||||||||| ||||||||||||||| |||||||||||||    
T  507159 ttatgtataaattatttctataacaaaagataaaataaagt 507199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 2767763 - 2767727
Alignment:
Q  152 cttatggacatgtcataagctgtttccacaagttctc 188  Q
    |||||||||||||||||||||||||||||||| ||||    
T  2767763 cttatggacatgtcataagctgtttccacaagctctc 2767727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 99
Target Start/End: Original strand, 7354145 - 7354181
Alignment:
Q  63 atgtataaactatttctataacaaatgataaaataaa 99  Q
    ||||||||||||||||||||||||| |||||||||||    
T  7354145 atgtataaactatttctataacaaaagataaaataaa 7354181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 20672005 - 20671953
Alignment:
Q  52 tataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||| |||||||||||| ||||||||| | |||| ||||||||||||||||    
T  20672005 tataagtgattatgtataagctatttctagatcaaaagataaaataaagtcaa 20671953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 29269838 - 29269878
Alignment:
Q  64 tgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||||||||||||||||| | ||||||||||||||||    
T  29269838 tgtataaactatttctataacagaagataaaataaagtcaa 29269878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 104
Target Start/End: Original strand, 2456891 - 2456933
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||||||||||||| |||||||| ||||||||||||||||    
T  2456891 ttatgtataaactatttcgataacaaa-gataaaataaagtcaa 2456933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 104
Target Start/End: Original strand, 2514641 - 2514684
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||||| |||||||||||| ||| ||||||||||||||||    
T  2514641 ttatgtataagctatttctataataaaagataaaataaagtcaa 2514684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 104
Target Start/End: Original strand, 4420556 - 4420599
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||    
T  4420556 ttatgtataagctacttctataacaaaagataaaataaagtcaa 4420599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 8349806 - 8349755
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaataaagt 101  Q
    |||||||| | || |||||||||||||||| ||||||| |||||||||||||    
T  8349806 catataagtgtttgtgtataaactatttctctaacaaaagataaaataaagt 8349755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 104
Target Start/End: Original strand, 24774697 - 24774740
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||| ||||||||||||||||||||||  |||||||||||||||    
T  24774697 ttatatataaactatttctataacaaaatataaaataaagtcaa 24774740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 104
Target Start/End: Complemental strand, 24836330 - 24836287
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    ||||||||||  ||||||||||||||| ||||||||||||||||    
T  24836330 ttatgtataagttatttctataacaaaagataaaataaagtcaa 24836287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 104
Target Start/End: Complemental strand, 29274360 - 29274317
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||||| ||||||||||| |||| ||||||||||||||||    
T  29274360 ttatgtataagctatttctatagcaaaagataaaataaagtcaa 29274317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 104
Target Start/End: Complemental strand, 33787876 - 33787833
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||||||||||||||||||||||  |||||| ||||||||    
T  33787876 ttatgtataaactatttctataacaaaatataaaacaaagtcaa 33787833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 4248886 - 4248940
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||| | |||| ||||| ||||||| |||||||| ||||||||||||||||    
T  4248886 catataagtgcttatatataagctatttcaataacaaaagataaaataaagtcaa 4248940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 13360663 - 13360717
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||| | ||||||  |||||||||||||||||||  |||||||||||||||    
T  13360663 catataagtgcttatgtgcaaactatttctataacaaaatataaaataaagtcaa 13360717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 35095069 - 35095015
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    ||||||||  ||||||||||||| ||||||||||||||  ||||||||| |||||    
T  35095069 catataagtaattatgtataaaccatttctataacaaaatataaaataatgtcaa 35095015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 740902 - 740861
Alignment:
Q  150 aacttatggacatgtcataagctgtttccacaagttctctca 191  Q
    |||||||| |||||||||||| |||||||||||| |||||||    
T  740902 aacttatgaacatgtcataagttgtttccacaagctctctca 740861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 104
Target Start/End: Original strand, 6654544 - 6654597
Alignment:
Q  51 atataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    ||||||| | ||||||||||  |||||||||||||||| ||||||| |||||||    
T  6654544 atataagggcttatgtataagttatttctataacaaataataaaattaagtcaa 6654597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 104
Target Start/End: Original strand, 9732393 - 9732458
Alignment:
Q  39 taaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||| |||||||||||| | ||||| |||| |||||||||||  ||| |||||||| |||||||    
T  9732393 taaacatttaccatataagtgcttatgcataagctatttctatattaaaggataaaattaagtcaa 9732458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 96
Target Start/End: Complemental strand, 11784160 - 11784131
Alignment:
Q  67 ataaactatttctataacaaatgataaaat 96  Q
    ||||||||||||||||||||||||||||||    
T  11784160 ataaactatttctataacaaatgataaaat 11784131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 2e-17; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 61 - 159
Target Start/End: Complemental strand, 49465794 - 49465696
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaatgtttttcaggaagctacaagttgttttcataagctattctggagaacttatgga 159  Q
    |||||| ||| |||||| ||||||||| ||||||||||||| ||| ||||||    ||||| | |||||||||||||||||| ||||||||||||||||    
T  49465794 ttatgtgtaagctatttttataacaaaagataaaataaagttaatttttttcgtatagctaaatgttgttttcataagctatactggagaacttatgga 49465696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 20143804 - 20143844
Alignment:
Q  2 gattagagttattccttgtttggataaacaacttaactaaa 42  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  20143804 gattagagttattccttgtttggataaacaacttaactaaa 20143844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 23269385 - 23269345
Alignment:
Q  2 gattagagttattccttgtttggataaacaacttaactaaa 42  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  23269385 gattagagttattccttgtttggataaacaacttaactaaa 23269345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 237
Target Start/End: Complemental strand, 21872345 - 21872227
Alignment:
Q  116 aagctacaagttgttttcataagctattctggagaacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttat 215  Q
    |||||| |||||||||||||||||||| ||||| |  |||||||||||||||||||| ||| || ||| | |  |||||| | ||   ||||||| ||||    
T  21872345 aagctataagttgttttcataagctatcctggaaagtttatggacatgtcataagctattttcaaaagcttttccaaacagtctc---acaagtgcttat 21872249  T
Q  216 gtcagtagataagcttaaataa 237  Q
    ||||||||||||| | ||||||    
T  21872248 gtcagtagataagatcaaataa 21872227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 156
Target Start/End: Original strand, 1816510 - 1816619
Alignment:
Q  50 catataagagattatgtataaactatttct-ataacaaatgataaaataaagtcaa--tgtttttcaggaagctacaagttgttttcataagctattctg 146  Q
    |||||||||| | ||||||||||||||| | |||| ||| ||||||||||||||||  |||||||    ||| || |||||||||||||||||||| |||    
T  1816510 catataagagctaatgtataaactattttttataataaaagataaaataaagtcaaactgtttttgtataagatataagttgttttcataagctatactg 1816609  T
Q  147 gagaacttat 156  Q
    |||| |||||    
T  1816610 gagagcttat 1816619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 142
Target Start/End: Complemental strand, 40122883 - 40122801
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaatgt-ttttcaggaagctacaagttgttttcataagctat 142  Q
    |||||||||| ||||||| |||||||| ||||||||||||||||  | ||||||  |||||| |||||||||| |||||||||    
T  40122883 ttatgtataagctatttcaataacaaaagataaaataaagtcaaactgttttcataaagctataagttgtttttataagctat 40122801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 199
Target Start/End: Complemental strand, 54180796 - 54180747
Alignment:
Q  150 aacttatggacatgtcataagctgtttccacaagttctctcaaacaatat 199  Q
    |||||||||||||||||||||||||||| |||||||||| || |||||||    
T  54180796 aacttatggacatgtcataagctgtttctacaagttctcacacacaatat 54180747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 204
Target Start/End: Complemental strand, 2100229 - 2100141
Alignment:
Q  116 aagctacaagttgttttcataagctattctggagaacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa 204  Q
    |||||| |||||||||||||||| |||  |||||| |||| | |||||||||||||||| |||| ||| |||| |||||| | ||||||    
T  2100229 aagctataagttgttttcataagttatcttggagagcttaggaacatgtcataagctgtctccataagctctcacaaacagtctcacaa 2100141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 41159005 - 41159097
Alignment:
Q  18 tgtttggataaacaacttaactaaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtcaatgtttt 110  Q
    ||||||||||| |||||||| |||||  ||| | |||||| | ||||||||||  |||| ||||||| || ||||||||||||||||| ||||    
T  41159005 tgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaatttttt 41159097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 105
Target Start/End: Complemental strand, 905112 - 905057
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaat 105  Q
    |||||||| | ||| |||||| |||||||||||||||| |||||||||||||||||    
T  905112 catataagcgcttaagtataagctatttctataacaaaagataaaataaagtcaat 905057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 159
Target Start/End: Original strand, 32582740 - 32582783
Alignment:
Q  116 aagctacaagttgttttcataagctattctggagaacttatgga 159  Q
    |||||||||| ||||||||||||||||| |||||||||||||||    
T  32582740 aagctacaagctgttttcataagctattttggagaacttatgga 32582783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 105
Target Start/End: Complemental strand, 41028993 - 41028938
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaat 105  Q
    |||||||| | |||||||||| |||||||||||||||| || ||||||||||||||    
T  41028993 catataagtgcttatgtataagctatttctataacaaaagaaaaaataaagtcaat 41028938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 251
Target Start/End: Complemental strand, 44014814 - 44014716
Alignment:
Q  150 aacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaac 249  Q
    |||||||| ||| |||||||||||||| || ||||| ||||||||| | ||   |||||||||||||  ||||||||| || |||||| ||| |||||||    
T  44014814 aacttatgaacaggtcataagctgttttcataagttttctcaaacagtctc---acaagtgtttatgctagtagataaactcaaataagccaatccaaac 44014718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 1395611 - 1395653
Alignment:
Q  62 tatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    ||||||||| |||||||||||||||| ||||||||||||||||    
T  1395611 tatgtataagctatttctataacaaaagataaaataaagtcaa 1395653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 104
Target Start/End: Original strand, 22232767 - 22232808
Alignment:
Q  63 atgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||| |||||| ||||||||||||||||||||||||||    
T  22232767 atgtataagctatttatataacaaatgataaaataaagtcaa 22232808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 104
Target Start/End: Original strand, 38462198 - 38462263
Alignment:
Q  39 taaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||| ||| |||||||| | |||| ||||| ||||||||||| |||| ||||||||||||||||    
T  38462198 taaacacttatcatataagtgtttatttataagctatttctataccaaaagataaaataaagtcaa 38462263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 42817238 - 42817193
Alignment:
Q  150 aacttatggacatgtcataagctgtttccacaagttctctcaaaca 195  Q
    ||||||||||||||||||| |||||||||| ||| |||||||||||    
T  42817238 aacttatggacatgtcatatgctgtttccataagctctctcaaaca 42817193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 101
Target Start/End: Complemental strand, 2128382 - 2128342
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagt 101  Q
    |||||||||| |||||||||||||||| |||||||||||||    
T  2128382 ttatgtataagctatttctataacaaaagataaaataaagt 2128342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 149
Target Start/End: Original strand, 21865521 - 21865605
Alignment:
Q  65 gtataaactatttctataacaaatgataaaataaagtcaatgtttttcaggaagctacaagttgttttcataagctattctggag 149  Q
    |||||| ||| |||||||||||| ||||||| || |||||||||||     |||||| |||||||||| |||||||||| |||||    
T  21865521 gtataagctagttctataacaaaagataaaacaaggtcaatgttttcatataagctataagttgttttgataagctattttggag 21865605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 22748206 - 22748154
Alignment:
Q  152 cttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa 204  Q
    |||||||||||| ||||| |||||||||||||||||||||  |||| ||||||    
T  22748206 cttatggacatgccataaactgtttccacaagttctctcatccaatctcacaa 22748154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 159
Target Start/End: Complemental strand, 14548795 - 14548752
Alignment:
Q  116 aagctacaagttgttttcataagctattctggagaacttatgga 159  Q
    |||||| |||||||||||||||| ||||||||||| ||||||||    
T  14548795 aagctataagttgttttcataagttattctggagagcttatgga 14548752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 104
Target Start/End: Complemental strand, 20192737 - 20192694
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||||| |||||| ||||||||| ||||||||||||||||    
T  20192737 ttatgtataagctatttatataacaaaagataaaataaagtcaa 20192694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 101
Target Start/End: Complemental strand, 22214811 - 22214772
Alignment:
Q  62 tatgtataaactatttctataacaaatgataaaataaagt 101  Q
    |||||||||| ||||||||||||||| |||||||||||||    
T  22214811 tatgtataaattatttctataacaaaggataaaataaagt 22214772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 104
Target Start/End: Original strand, 23793528 - 23793570
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||    
T  23793528 ttatgtataaactattt-tataacaaaagataaaataaagtcaa 23793570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 104
Target Start/End: Original strand, 34958267 - 34958310
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    ||||| ||||||||||||||||||| | ||||||||||||||||    
T  34958267 ttatgaataaactatttctataacacaagataaaataaagtcaa 34958310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 43046703 - 43046774
Alignment:
Q  133 cataagctattctggagaacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa 204  Q
    ||||||||||  ||||||||||||| |||| ||| ||||||||| || |||||||| |||||| | ||||||    
T  43046703 cataagctatcttggagaacttatgaacatttcaaaagctgttttcataagttctcccaaacagtctcacaa 43046774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 63 - 101
Target Start/End: Original strand, 33882969 - 33883007
Alignment:
Q  63 atgtataaactatttctataacaaatgataaaataaagt 101  Q
    ||||||||| ||||||||||||||| |||||||||||||    
T  33882969 atgtataaattatttctataacaaaagataaaataaagt 33883007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 34707512 - 34707458
Alignment:
Q  150 aacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa 204  Q
    ||||||||||||||||| ||| ||||| || ||||||||||||||| | ||||||    
T  34707512 aacttatggacatgtcacaagttgttttcaaaagttctctcaaacagtctcacaa 34707458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 212 - 250
Target Start/End: Complemental strand, 36832245 - 36832207
Alignment:
Q  212 ttatgtcagtagataagcttaaataaaccagtccaaaca 250  Q
    ||||||||||||| |||||||||||| ||||||||||||    
T  36832245 ttatgtcagtagaaaagcttaaataagccagtccaaaca 36832207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 42084381 - 42084339
Alignment:
Q  62 tatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    ||||||||| |||||||||||||||| |||||||||| |||||    
T  42084381 tatgtataagctatttctataacaaaggataaaataatgtcaa 42084339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 44374786 - 44374732
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||| | |||||||||| |||| ||| ||||||| ||||||||||||||||    
T  44374786 catataagtgcttatgtataagctatatctttaacaaaagataaaataaagtcaa 44374732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 49587042 - 49587004
Alignment:
Q  66 tataaactatttctataacaaatgataaaataaagtcaa 104  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  49587042 tataagctatttctataacaaaagataaaataaagtcaa 49587004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 228
Target Start/End: Complemental strand, 53735982 - 53735913
Alignment:
Q  156 tggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataag 228  Q
    ||||||||||||||| |||||| | ||||||||||||||||| ||   |  |||||||||||||||| |||||    
T  53735982 tggacatgtcataagttgtttcaataagttctctcaaacaatctc---attagtgtttatgtcagtaaataag 53735913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 37273188 - 37273233
Alignment:
Q  150 aacttatggacatgtcataagctgtttccacaagttctctcaaaca 195  Q
    ||||||||||||||||||||| |||||||| ||| |||| ||||||    
T  37273188 aacttatggacatgtcataagttgtttccataagctctcccaaaca 37273233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 48365012 - 48364967
Alignment:
Q  59 gattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    ||||||||||||  |||||| |||||||| ||||||||||||||||    
T  48365012 gattatgtataagttatttcgataacaaaagataaaataaagtcaa 48364967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 3e-16; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 63 - 176
Target Start/End: Complemental strand, 28340525 - 28340410
Alignment:
Q  63 atgtataaactatttctataacaaatgataaaataaagtcaa--tgtttttcaggaagctacaagttgttttcataagctattctggagaacttatggac 160  Q
    |||||||| ||||||||  ||||||  |||||||||||||||  ||||||   | ||| || |||||||||||| ||||||| ||||||| |||||||||    
T  28340525 atgtataagctatttcttcaacaaacaataaaataaagtcaaactgttttcatgtaagttataagttgttttcagaagctatgctggagagcttatggac 28340426  T
Q  161 atgtcataagctgttt 176  Q
    |||||||||| |||||    
T  28340425 atgtcataagttgttt 28340410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 29574668 - 29574603
Alignment:
Q  123 aagttgttttcataagctattctggagaacttatggacatgtcataagctgtttccacaagttctc 188  Q
    |||||||||||||| |||||  ||||||  ||||||||||||||||||||||||||| ||||||||    
T  29574668 aagttgttttcatatgctatcatggagaggttatggacatgtcataagctgtttccataagttctc 29574603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 7513530 - 7513612
Alignment:
Q  18 tgtttggataaacaacttaactaaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaag 100  Q
    |||||||||||| ||||||||||| ||  ||||||||||| | |||||||||| |||||| ||  ||||| ||||||||||||    
T  7513530 tgtttggataaaaaacttaactaagcatgtaccatataagtgcttatgtataagctatttttaagacaaaagataaaataaag 7513612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 36537962 - 36538016
Alignment:
Q  150 aacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa 204  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||| ||||||    
T  36537962 aacttatgaacatgtcataagttgtttccataagttctctcaaacaatctcacaa 36538016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 197
Target Start/End: Complemental strand, 39591586 - 39591467
Alignment:
Q  73 tatttctataacaaatgataaaataaagtcaatgt-ttttcaggaagctacaagttgttttcataagctattctggagaacttatggacatgtcataagc 171  Q
    ||||||||||||||| ||||||||||||||||  | ||||||      || |||||||||| ||||| | | ||||||| |||||||| |||||||| |     
T  39591586 tatttctataacaaaagataaaataaagtcaaattgttttca------tataagttgttttgataagttttgctggagagcttatggatatgtcatagga 39591493  T
Q  172 tgtttccacaagttctctcaaacaat 197  Q
    |||||||| ||| |||||||||||||    
T  39591492 tgtttccataagctctctcaaacaat 39591467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 46056182 - 46056041
Alignment:
Q  18 tgtttggataaacaacttaactaaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtc-aatgtttttcagga 116  Q
    |||||||||||||||||||| ||| || ||| ||| |||| | |||||| ||||||||||||||  || |  ||||||||||| | |||||||||  | |    
T  46056182 tgtttggataaacaacttaattaagcatttatcatttaagtgcttatgtgtaaactatttctat-gcagaacataaaataaagccaaatgtttttgtgta 46056084  T
Q  117 agctacaagttgttttcataagctattctggagaacttatgga 159  Q
    ||||| || ||||||||||||||||| | | ||| ||||||||    
T  46056083 agctataaattgttttcataagctatcccgtagagcttatgga 46056041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 104
Target Start/End: Original strand, 1417203 - 1417246
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||    
T  1417203 ttatgtataaactatttatataacaaaagataaaataaagtcaa 1417246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 204
Target Start/End: Complemental strand, 27626136 - 27626085
Alignment:
Q  153 ttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa 204  Q
    ||||||||||||||||||||||||||| ||| | ||||||||||| ||||||    
T  27626136 ttatggacatgtcataagctgtttccataagctttctcaaacaatctcacaa 27626085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 104
Target Start/End: Original strand, 30496643 - 30496686
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||||||||||||||||||||||  |||||||||||||||    
T  30496643 ttatgtataaactatttctataacaaaatataaaataaagtcaa 30496686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 237
Target Start/End: Complemental strand, 20547403 - 20547322
Alignment:
Q  153 ttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataa 237  Q
    |||| ||||||||||| ||||| |||| ||| ||||||||||| ||||   |||||||||||||||| ||||||| || ||||||    
T  20547403 ttatcgacatgtcataggctgtctccataagctctctcaaacagtatc---acaagtgtttatgtcattagataaactaaaataa 20547322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 104
Target Start/End: Original strand, 1792438 - 1792475
Alignment:
Q  67 ataaactatttctataacaaatgataaaataaagtcaa 104  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  1792438 ataaactatttctataacaaatgatgaaataaagtcaa 1792475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 104
Target Start/End: Complemental strand, 43318653 - 43318616
Alignment:
Q  67 ataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||| |||||||||||||||||||||||||||||||||    
T  43318653 ataagctatttctataacaaatgataaaataaagtcaa 43318616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 204
Target Start/End: Complemental strand, 27517355 - 27517267
Alignment:
Q  116 aagctacaagttgttttcataagctattctggagaacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa 204  Q
    |||||||||  |||||||||||| ||| ||||||| ||||||||||||| || ||  ||||||| ||  ||||||||||| | ||||||    
T  27517355 aagctacaaactgttttcataagttatcctggagagcttatggacatgttatgagtggtttccataaactctctcaaacagtctcacaa 27517267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 28178910 - 28178950
Alignment:
Q  63 atgtataaactatttctataacaaatgataaaataaagtca 103  Q
    |||||||| |||||||||||||||| |||||||||||||||    
T  28178910 atgtataagctatttctataacaaaagataaaataaagtca 28178950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 36598370 - 36598318
Alignment:
Q  152 cttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa 204  Q
    |||||| |||||||||||| |||||||| ||| ||||||||||||| ||||||    
T  36598370 cttatgaacatgtcataagatgtttccataagctctctcaaacaatctcacaa 36598318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 111
Target Start/End: Original strand, 25511569 - 25511616
Alignment:
Q  64 tgtataaactatttctataacaaatgataaaataaagtcaatgttttt 111  Q
    |||||||| ||||||||||||||| ||| ||||||||||||| |||||    
T  25511569 tgtataaattatttctataacaaaagatgaaataaagtcaattttttt 25511616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 104
Target Start/End: Complemental strand, 27121717 - 27121674
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    ||||||||||  ||||||||||| ||||||||||||||||||||    
T  27121717 ttatgtataagatatttctataataaatgataaaataaagtcaa 27121674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 204
Target Start/End: Complemental strand, 27508369 - 27508294
Alignment:
Q  129 ttttcataagctattctggagaacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa 204  Q
    |||||||||||||| ||  ||| ||||||||||||| |||||  ||||||| || |||||||||||| | ||||||    
T  27508369 ttttcataagctatccttaagagcttatggacatgttataagtggtttccataaattctctcaaacagtctcacaa 27508294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 104
Target Start/End: Original strand, 31341133 - 31341176
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||||| |||||| ||||||||| ||||||||||||||||    
T  31341133 ttatgtataagctatttgtataacaaaagataaaataaagtcaa 31341176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 104
Target Start/End: Original strand, 35536046 - 35536089
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||||| |||||||||||||| | ||||||||||||||||    
T  35536046 ttatgtataagctatttctataacataagataaaataaagtcaa 35536089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 104
Target Start/End: Complemental strand, 35809035 - 35808992
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||||| |||||||||||||||| ||||||||| ||||||    
T  35809035 ttatgtataagctatttctataacaaaagataaaatatagtcaa 35808992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 104
Target Start/End: Original strand, 42656454 - 42656497
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||| ||||| |||||||||||||||| ||||||||||||||||    
T  42656454 ttatatataagctatttctataacaaaagataaaataaagtcaa 42656497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 99
Target Start/End: Original strand, 47006970 - 47007025
Alignment:
Q  44 agttaccatataagagattatgtataaactatttctataacaaatgataaaataaa 99  Q
    ||||| |||||||| | ||||||||||||| ||||||||||||| ||| |||||||    
T  47006970 agttatcatataagtgcttatgtataaactttttctataacaaaagatcaaataaa 47007025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 104
Target Start/End: Original strand, 49060479 - 49060522
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||||| ||||||||||||||||  |||||||||||||||    
T  49060479 ttatgtataagctatttctataacaaaaaataaaataaagtcaa 49060522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 70 - 104
Target Start/End: Original strand, 2999139 - 2999173
Alignment:
Q  70 aactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||||||||||||| ||||||||||||||||    
T  2999139 aactatttctataacaaaagataaaataaagtcaa 2999173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 5006639 - 5006597
Alignment:
Q  62 tatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    ||||||||| ||||| |||||||||| ||||||||||||||||    
T  5006639 tatgtataagctattcctataacaaaagataaaataaagtcaa 5006597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 103
Target Start/End: Complemental strand, 5272951 - 5272909
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtca 103  Q
    ||||||||||||||||| ||||||||| |||||||| ||||||    
T  5272951 ttatgtataaactatttatataacaaaagataaaattaagtca 5272909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 196
Target Start/End: Complemental strand, 6857355 - 6857309
Alignment:
Q  150 aacttatggacatgtcataagctgtttccacaagttctctcaaacaa 196  Q
    |||||||||||||| ||||||||||||||| ||| |||||| |||||    
T  6857355 aacttatggacatggcataagctgtttccataagctctctcgaacaa 6857309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 7244630 - 7244684
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||| | |||||||||| ||||||||||| |||| ||||||| ||||||||    
T  7244630 catataagtgcttatgtataagctatttctatatcaaaagataaaagaaagtcaa 7244684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 24973872 - 24973926
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||| | ||||||| || |||||||||||||||| ||||||||||| ||||    
T  24973872 catataagtgcttatgtaaaagctatttctataacaaaagataaaataaattcaa 24973926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 250
Target Start/End: Original strand, 33894681 - 33894778
Alignment:
Q  150 aacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaac 249  Q
    ||||||||||||||||||| ||||||| || ||| |||| |||||| | ||   ||||||| |||||||| | |||||||| |||||| | | |||||||    
T  33894681 aacttatggacatgtcatatgctgttttcataagctctcacaaacagtctc---acaagtgcttatgtcatttgataagctcaaataagctaatccaaac 33894777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 99
Target Start/End: Complemental strand, 36874096 - 36874058
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaa 99  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  36874096 ttatgtataagctatttctataagaaatgataaaataaa 36874058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 157
Target Start/End: Original strand, 44821966 - 44821996
Alignment:
Q  127 tgttttcataagctattctggagaacttatg 157  Q
    |||||||||||||||||||||||||||||||    
T  44821966 tgttttcataagctattctggagaacttatg 44821996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 104
Target Start/End: Complemental strand, 753357 - 753292
Alignment:
Q  39 taaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||| ||| |||||||| | || |||||| |||||||||||||||||  || ||||||||||||    
T  753357 taaacatttatcatataagcgcttgtgtatacactatttctataacaaaatatgaaataaagtcaa 753292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 2727489 - 2727452
Alignment:
Q  63 atgtataaactatttctataacaaatgataaaataaag 100  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  2727489 atgtatagactatttctataacaaaagataaaataaag 2727452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 251
Target Start/End: Complemental strand, 3610754 - 3610658
Alignment:
Q  152 cttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaacag 251  Q
    |||||||||||||||| ||||||||||| ||| | || |||| | ||||   ||||||| ||| | ||||||||||||| |||||| ||| | |||||||    
T  3610754 cttatggacatgtcattagctgtttccataaggtttcccaaaaagtatc---acaagtggttaggccagtagataagctcaaataagccaattcaaacag 3610658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 265
Target Start/End: Complemental strand, 3968588 - 3968535
Alignment:
Q  212 ttatgtcagtagataagcttaaataaaccagtccaaacagaccttaagtggttt 265  Q
    ||||| |||||||||| || |||||||| | |||||||||||| ||||||||||    
T  3968588 ttatggcagtagataacctcaaataaactaatccaaacagaccctaagtggttt 3968535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 102
Target Start/End: Original strand, 5373164 - 5373205
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtc 102  Q
    |||||||||  |||||||||||||||| ||||||||||||||    
T  5373164 ttatgtatatgctatttctataacaaaagataaaataaagtc 5373205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 104
Target Start/End: Complemental strand, 27481435 - 27481382
Alignment:
Q  51 atataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    ||||||| | |||||||||| |||||||||||||||| |||||||  |||||||    
T  27481435 atataagtgtttatgtataagctatttctataacaaaggataaaacgaagtcaa 27481382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 98
Target Start/End: Original strand, 33894562 - 33894599
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataa 98  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  33894562 ttatgtataagctatttctataacaaaagataaaataa 33894599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 43153030 - 43152993
Alignment:
Q  64 tgtataaactatttctataacaaatgataaaataaagt 101  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  43153030 tgtataagctatttctataacaaaagataaaataaagt 43152993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 157
Target Start/End: Original strand, 11802475 - 11802571
Alignment:
Q  62 tatgtataaactatttctataacaaatgataaaataaagtcaatgtttt-tcagg-aagctacaagttgttttcataagctattctggagaacttatg 157  Q
    ||||||||| ||||| |||||||||| ||||||||||||||||  |||| |||   |||||||||||||||||||||||||||| |||||| ||||||    
T  11802475 tatgtataagctatt-ctataacaaaagataaaataaagtcaaatttttctcacataagctacaagttgttttcataagctattatggagagcttatg 11802571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 178
Target Start/End: Original strand, 7730630 - 7730682
Alignment:
Q  126 ttgttttcataagctattctggagaacttatggacatgtcataagctgtttcc 178  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||| |||||||    
T  7730630 ttgttttcataagctatcctggagagcttatggacatgtcataagttgtttcc 7730682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 142
Target Start/End: Original strand, 18630608 - 18630702
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaat-gtttttcagg-aagctacaagttgttttcataagctat 142  Q
    |||||||| | ||||| |||||||||||| |||||||| ||||||||||||||||| | ||||||   |||||| |||||||||||| |||||||    
T  18630608 catataagcgcttatgcataaactatttcaataacaaaagataaaataaagtcaattggttttcatataagctataagttgttttcacaagctat 18630702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 19304980 - 19305034
Alignment:
Q  150 aacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa 204  Q
    ||||||||||||||||||||||||||||||||| ||||| || ||||| ||||||    
T  19304980 aacttatggacatgtcataagctgtttccacaaattctcccacacaatctcacaa 19305034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 170
Target Start/End: Original strand, 8147899 - 8147942
Alignment:
Q  127 tgttttcataagctattctggagaacttatggacatgtcataag 170  Q
    |||||||||||||||| || ||||||||||||||||||||||||    
T  8147899 tgttttcataagctatcctagagaacttatggacatgtcataag 8147942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 104
Target Start/End: Complemental strand, 21593142 - 21593099
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||||||||||||||||||| || ||||||||||||||||    
T  21593142 ttatgtataaactatttctataactaaagataaaataaagtcaa 21593099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 104
Target Start/End: Complemental strand, 51044590 - 51044547
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||||| |||||||||||||||| ||||||||||||||||    
T  51044590 ttatgtataagctatttctataacaaaagataaaataaagtcaa 51044547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 104
Target Start/End: Original strand, 4071807 - 4071864
Alignment:
Q  46 ttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||||||| | |||| ||||| |||||||||||||||| ||||||||||||||||    
T  4071807 ttaccatataagtgtttatatataa-ctatttctataacaaaagataaaataaagtcaa 4071864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 19422314 - 19422400
Alignment:
Q  18 tgtttggataaacaacttaactaaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||||||||| ||||| ||| |  ||| |||||||  | ||||||||||  ||||||||||||||| |||| |||||||||||    
T  19422314 tgtttggataaacagcttaattaagcgcttatcatataaatgcttatgtataagttatttctataacaaaagatataataaagtcaa 19422400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 254
Target Start/End: Original strand, 28615389 - 28615489
Alignment:
Q  150 aacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaac 249  Q
    |||||||| | ||||||| |||||||| || |||||||| |||||||| ||||||   |||||||||  ||||||||| |||||||||  || |||||||    
T  28615389 aacttatgaaaatgtcattagctgttttcataagttctc-caaacaatctcacaa---gtgtttatgctagtagataaacttaaataagtcaatccaaac 28615484  T
Q  250 agacc 254  Q
    |||||    
T  28615485 agacc 28615489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 45128452 - 45128406
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaat 96  Q
    |||||||||  ||||||||||||||||||||||||||| ||||||||    
T  45128452 catataagaacttatgtataaactatttctataacaaaagataaaat 45128406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 47970246 - 47970300
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||| | |||||||||| |||||||||||||||| |||||||| |||||||    
T  47970246 catataagtgcttatgtataagctatttctataacaaaagataaaatgaagtcaa 47970300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 54325179 - 54325125
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||| | || |||||||||||||||||| ||||| ||||||||||||||||    
T  54325179 catataagtgcttgtgtataaactatttctattacaaaagataaaataaagtcaa 54325125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 24160662 - 24160545
Alignment:
Q  25 ataaacaacttaactaaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtcaatgt-ttttca-ggaagctac 122  Q
    ||||||||||||| |||||  ||| |||||||| | ||||  |||| || ||||||||||||| ||||| ||||| ||||  | |||||| | ||||||     
T  24160662 ataaacaacttaattaaacgcttatcatataagtgcttataaataagctttttctataacaaaagataatataaattcaaactattttcatgtaagctat 24160563  T
Q  123 aagttgttttcataagct 140  Q
    ||||||||||||||||||    
T  24160562 aagttgttttcataagct 24160545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 101
Target Start/End: Original strand, 6364088 - 6364128
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagt 101  Q
    |||||||||| |||||||||||||||| |||||||||||||    
T  6364088 ttatgtataagctatttctataacaaaagataaaataaagt 6364128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 166
Target Start/End: Complemental strand, 11262827 - 11262787
Alignment:
Q  126 ttgttttcataagctattctggagaacttatggacatgtca 166  Q
    ||||||||||||||||| ||||||| |||||||||||||||    
T  11262827 ttgttttcataagctatcctggagagcttatggacatgtca 11262787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 101
Target Start/End: Complemental strand, 21683610 - 21683570
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagt 101  Q
    ||||||||||||||||||||||||||| ||||| |||||||    
T  21683610 ttatgtataaactatttctataacaaaagataagataaagt 21683570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 101
Target Start/End: Complemental strand, 30338723 - 30338683
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagt 101  Q
    ||||||||||||||||||||||||||| |||| ||||||||    
T  30338723 ttatgtataaactatttctataacaaaagatagaataaagt 30338683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 54277442 - 54277402
Alignment:
Q  64 tgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    ||||||||||| |||||||||||| ||||||||||||||||    
T  54277442 tgtataaactacttctataacaaaagataaaataaagtcaa 54277402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 142
Target Start/End: Original strand, 3155543 - 3155625
Alignment:
Q  62 tatgtataaactatttctataacaaatgataaaataaagtcaa--tgtttttcaggaagctacaagttgttttcataagctat 142  Q
    ||||||||| ||||||||||| |||| ||||||||||||| ||  |||||||    |||||||||| ||||||||||| ||||    
T  3155543 tatgtataagctatttctatagcaaaagataaaataaagttaaattgtttttgtacaagctacaagctgttttcataaactat 3155625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 4191667 - 4191722
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgat-aaaataaagtcaa 104  Q
    |||||||| | |||||||||| |||||||||||||||| ||| |||||||||||||    
T  4191667 catataagtgcttatgtataagctatttctataacaaaagataaaaataaagtcaa 4191722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 104
Target Start/End: Complemental strand, 20936129 - 20936090
Alignment:
Q  65 gtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    ||||| ||||||||||||||||| ||||||||||||||||    
T  20936129 gtatagactatttctataacaaaagataaaataaagtcaa 20936090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 104
Target Start/End: Complemental strand, 42322010 - 42321967
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    ||||| |||| |||||| ||||||||||||||||||||||||||    
T  42322010 ttatgaataagctatttttataacaaatgataaaataaagtcaa 42321967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 14011130 - 14011212
Alignment:
Q  18 tgtttggataaacaacttaactaaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaag 100  Q
    |||||||||||||||||||| |||    ||| |||||||  |||| ||||||| ||| || ||||||||| ||||||||||||    
T  14011130 tgtttggataaacaacttaattaagtgtttatcatataaatgattgtgtataagctagttttataacaaaagataaaataaag 14011212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 102
Target Start/End: Original strand, 24929435 - 24929473
Alignment:
Q  64 tgtataaactatttctataacaaatgataaaataaagtc 102  Q
    ||||| |||||||||||||||||| ||||||||||||||    
T  24929435 tgtatgaactatttctataacaaaagataaaataaagtc 24929473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 103
Target Start/End: Complemental strand, 25487676 - 25487634
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtca 103  Q
    |||||||||| ||||||||||||||||  ||||||||||||||    
T  25487676 ttatgtataagctatttctataacaaaaaataaaataaagtca 25487634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 36734821 - 36734875
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||| | |||||||||| || ||||||||||||| | ||||||||||||||    
T  36734821 catataagtgcttatgtataatctctttctataacaaaaggtaaaataaagtcaa 36734875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 969517 - 969432
Alignment:
Q  20 tttggataaacaacttaactaaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtcaat 105  Q
    ||||||||||||||||||  || |  ||| |||||||| | |||| ||||| | |||||||||| ||| | |||||||||||||||    
T  969517 tttggataaacaacttaatcaagcgcttatcatataagtgcttatctataagcaatttctataataaaaggtaaaataaagtcaat 969432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 194
Target Start/End: Original strand, 1075509 - 1075550
Alignment:
Q  153 ttatggacatgtcataagctgtttccacaagttctctcaaac 194  Q
    ||||||||||||||||||||||||| | |||||||| |||||    
T  1075509 ttatggacatgtcataagctgtttctagaagttctcccaaac 1075550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 104
Target Start/End: Original strand, 3662293 - 3662330
Alignment:
Q  67 ataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  3662293 ataaactattcctataacaaaagataaaataaagtcaa 3662330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 4471100 - 4471149
Alignment:
Q  51 atataagagattatgtataaactatttctataacaaatgataaaataaag 100  Q
    ||||||| | ||||| ||||||||||| ||||||||| ||||||||||||    
T  4471100 atataagtgcttatgcataaactatttttataacaaaagataaaataaag 4471149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 102
Target Start/End: Complemental strand, 4798690 - 4798649
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtc 102  Q
    |||||||||| ||||||||||| |||| ||||||||||||||    
T  4798690 ttatgtataagctatttctatatcaaaagataaaataaagtc 4798649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 110
Target Start/End: Complemental strand, 8422968 - 8422919
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaatgtttt 110  Q
    |||||||||| |||||| ||||| ||| ||||||||||||||| ||||||    
T  8422968 ttatgtataagctatttttataaaaaaagataaaataaagtcattgtttt 8422919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 11264229 - 11264278
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaataaa 99  Q
    |||||||| ||||||||||||||||||||  ||| ||| |||||||||||    
T  11264229 catataagtgattatgtataaactatttcactaataaaagataaaataaa 11264278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 18512480 - 18512447
Alignment:
Q  204 acaagtgtttatgtcagtagataagcttaaataa 237  Q
    ||||||||||||||||||||||||||| ||||||    
T  18512480 acaagtgtttatgtcagtagataagctcaaataa 18512447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 104
Target Start/End: Original strand, 21953214 - 21953255
Alignment:
Q  63 atgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    ||||||||||||||||||||||||| |  |||||||||||||    
T  21953214 atgtataaactatttctataacaaaagggaaaataaagtcaa 21953255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 27623641 - 27623710
Alignment:
Q  123 aagttgttttcataagctattctggagaacttatggacatgtcataagctgtttccacaagttctctcaa 192  Q
    |||||||||||||||| ||| ||||||| ||||||  ||||||||| | |||||||| || || ||||||    
T  27623641 aagttgttttcataagttatcctggagagcttatgagcatgtcataggttgtttccataaattttctcaa 27623710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 241
Target Start/End: Original strand, 47970401 - 47970438
Alignment:
Q  204 acaagtgtttatgtcagtagataagcttaaataaacca 241  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  47970401 acaagtgcttatgtcagtagataagctcaaataaacca 47970438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 51556009 - 51555956
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaataaagtca 103  Q
    |||||||| | |||||||||| |||||  ||||||||| |||||||||||||||    
T  51556009 catataagtgcttatgtataagctattattataacaaaagataaaataaagtca 51555956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 54575720 - 54575679
Alignment:
Q  60 attatgtataaactatttctataacaaatgataaaataaagt 101  Q
    |||||||||||||| ||||||||||||| ||||||| |||||    
T  54575720 attatgtataaactttttctataacaaaagataaaacaaagt 54575679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0654 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 6813 - 6725
Alignment:
Q  17 ttgtttggataaacaacttaac-taaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||||||||||||||||  ||| || ||| |||||||| | |||||||||||||||||||||||||||  ||||| | |||||||    
T  6813 ttgtttggataaacaacttaatataagcacttatcatataagtgcttatgtataaactatttctataacaaaaaataaacttaagtcaa 6725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 116732 - 116644
Alignment:
Q  17 ttgtttggataaacaacttaac-taaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||||||||||||||||  ||| || ||| |||||||| | |||||||||||||||||||||||||||  ||||| | |||||||    
T  116732 ttgtttggataaacaacttaatataagcacttatcatataagtgcttatgtataaactatttctataacaaaaaataaacttaagtcaa 116644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 1216 - 1162
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||| | |||||||||| |||||||||||||||| ||||||||||||||||    
T  1216 catataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaa 1162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 2759 - 2813
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||| | |||||||||| |||||||||||||||| ||||||||||||||||    
T  2759 catataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaa 2813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 23807 - 23888
Alignment:
Q  18 tgtttggataaacaacttaactaaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaa 99  Q
    |||||||||||||||||||| |||||| ||| |||| ||| | |||  ||||| |||||||||||||||| ||| |||||||    
T  23807 tgtttggataaacaacttaattaaacacttatcataaaagcgcttacatataagctatttctataacaaaagatgaaataaa 23888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000005; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 50 - 111
Target Start/End: Original strand, 870973 - 871034
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaatgttttt 111  Q
    |||||||| | ||||||||||||||||| ||||||||| |||||||| |||||||| |||||    
T  870973 catataagtgcttatgtataaactatttttataacaaaagataaaattaagtcaattttttt 871034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 156 - 251
Target Start/End: Original strand, 33759630 - 33759724
Alignment:
Q  156 tggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaacag 251  Q
    ||||||||| ||| |||||||||  ||  |||| |||| ||| |||||| ||||| |||||||||| ||||| || ||||||||||||||||||||    
T  33759630 tggacatgttataggctgtttccgaaatctctcccaaataatctcacaa-aagtgcttatgtcagtcgataaactcaaataaaccagtccaaacag 33759724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 254
Target Start/End: Original strand, 43420315 - 43420413
Alignment:
Q  153 ttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaacaga 252  Q
    ||||| ||||||||||||||||||||| ||| |||| ||| || | ||||||   ||||||||||| ||||||||||| |||||| | | ||| ||||||    
T  43420315 ttatgaacatgtcataagctgtttccataagatctcacaagcagtctcacaa---gtgtttatgtctgtagataagctcaaataagctaatcctaacaga 43420411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 104
Target Start/End: Original strand, 50319231 - 50319274
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||||| |||||||||||||||| ||||||||||||||||    
T  50319231 ttatgtataagctatttctataacaaaagataaaataaagtcaa 50319274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 23895264 - 23895318
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    ||||||||  ||||||||||| |||||||||||||||| ||||||||||| ||||    
T  23895264 catataagttattatgtataagctatttctataacaaaagataaaataaattcaa 23895318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 200
Target Start/End: Complemental strand, 28689468 - 28689418
Alignment:
Q  150 aacttatggacatgtcataagctgtttccacaagttctctcaaacaatatc 200  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||| ||||    
T  28689468 aacttatggacatgtcataagctgtttccgtaagttctctaaaacagtatc 28689418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 15579536 - 15579581
Alignment:
Q  150 aacttatggacatgtcataagctgtttccacaagttctctcaaaca 195  Q
    ||||||||||||||||||||| |||||||||||| |||| ||||||    
T  15579536 aacttatggacatgtcataagttgtttccacaagctctcccaaaca 15579581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 104
Target Start/End: Complemental strand, 40358027 - 40357974
Alignment:
Q  51 atataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    ||||||| || ||||||||| |||||||||||||||  ||||||||||||||||    
T  40358027 atataagtgactatgtataagctatttctataacaatggataaaataaagtcaa 40357974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 41638484 - 41638399
Alignment:
Q  18 tgtttggataaacaacttaactaaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtca 103  Q
    |||||||||||||||||| | ||| || ||| |||||||| | ||||||||||  ||||| || |||| | |||||||||||||||    
T  41638484 tgtttggataaacaacttgattaagcacttatcatataagtgcttatgtataatttatttatagaacacaagataaaataaagtca 41638399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 101
Target Start/End: Original strand, 7028231 - 7028271
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagt 101  Q
    |||||||||||||||||||||| |||| |||||||||||||    
T  7028231 ttatgtataaactatttctatagcaaaagataaaataaagt 7028271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 26293192 - 26293140
Alignment:
Q  126 ttgttttcataagctattctggagaacttatggacatgtcataagctgtttcc 178  Q
    ||||||||||||||||| ||||| |  |||||||||| |||||||||||||||    
T  26293192 ttgttttcataagctatcctggaaagtttatggacatctcataagctgtttcc 26293140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 49521818 - 49521774
Alignment:
Q  153 ttatggacatgtcataagctgtttccacaagttctctcaaacaat 197  Q
    ||||| |||||||||||| |||||||||||| |||||||||||||    
T  49521818 ttatgaacatgtcataagttgtttccacaagctctctcaaacaat 49521774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 159
Target Start/End: Complemental strand, 10581151 - 10581108
Alignment:
Q  116 aagctacaagttgttttcataagctattctggagaacttatgga 159  Q
    |||||| ||||||||||||||||||||| ||| |||||||||||    
T  10581151 aagctataagttgttttcataagctattatggggaacttatgga 10581108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 237
Target Start/End: Original strand, 15581310 - 15581392
Alignment:
Q  152 cttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataa 237  Q
    ||||| ||||||||||||| ||||||||  || |||  |||||||| ||||||   ||| ||||||||||||||||||| ||||||    
T  15581310 cttatagacatgtcataagttgtttccattagctcttccaaacaatctcacaa---gtgcttatgtcagtagataagctaaaataa 15581392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 104
Target Start/End: Original strand, 26184690 - 26184733
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    ||||||||||||||||||||||| ||| | ||||||||||||||    
T  26184690 ttatgtataaactatttctataagaaaaggtaaaataaagtcaa 26184733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 204
Target Start/End: Original strand, 29723546 - 29723597
Alignment:
Q  153 ttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa 204  Q
    |||||||||||||||||||||||||||  |||||| ||||||  ||||||||    
T  29723546 ttatggacatgtcataagctgtttccattagttctttcaaactgtatcacaa 29723597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 104
Target Start/End: Complemental strand, 36151636 - 36151593
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||||| ||||||| |||||||| ||||||||||||||||    
T  36151636 ttatgtataagctatttcaataacaaaagataaaataaagtcaa 36151593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 204
Target Start/End: Original strand, 37811909 - 37811960
Alignment:
Q  153 ttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa 204  Q
    ||||| |||||||||||||||||| || |||||||||||| || ||||||||    
T  37811909 ttatgaacatgtcataagctgttttcataagttctctcaaccagtatcacaa 37811960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 189
Target Start/End: Complemental strand, 2035470 - 2035408
Alignment:
Q  127 tgttttcataagctattctggagaacttatggacatgtcataagctgtttccacaagttctct 189  Q
    |||||||||||||||| | || || |||||||| |||||||||||| ||| || |||||||||    
T  2035470 tgttttcataagctatccaggtgagcttatggatatgtcataagctattttcataagttctct 2035408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 4276763 - 4276725
Alignment:
Q  65 gtataaactatttctataacaaatgataaaataaagtca 103  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  4276763 gtataaactatttctataacaaaagataatataaagtca 4276725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 50 - 96
Target Start/End: Original strand, 6659631 - 6659677
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaat 96  Q
    |||||||| | |||||||||||||||||||||| |||| ||||||||    
T  6659631 catataagtgcttatgtataaactatttctatagcaaaagataaaat 6659677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 66 - 157
Target Start/End: Complemental strand, 7218200 - 7218107
Alignment:
Q  66 tataaactatttctataacaaatgataaaataaagtcaa--tgtttttcaggaagctacaagttgttttcataagctattctggagaacttatg 157  Q
    ||||| ||||||| |||| ||| | ||||||||||||||  ||||||     |||||| ||||||||||||||| |||| ||||||||||||||    
T  7218200 tataatctatttccataataaaaggtaaaataaagtcaaattgttttcatataagctataagttgttttcataacctatcctggagaacttatg 7218107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 101
Target Start/End: Original strand, 14332561 - 14332591
Alignment:
Q  71 actatttctataacaaatgataaaataaagt 101  Q
    |||||||||||||||||||||||||||||||    
T  14332561 actatttctataacaaatgataaaataaagt 14332591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 36602718 - 36602772
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||| |||||||||||| |||| |||| |||||  ||||||||||||||||    
T  36602718 catataagtgattatgtataagctatatctacaacaatagataaaataaagtcaa 36602772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 37176008 - 37175958
Alignment:
Q  54 taagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||| |||||| ||||||||||||||||||| || | ||||||||||||||    
T  37176008 taagtgattatatataaactatttctataaccaaaggtaaaataaagtcaa 37175958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 99
Target Start/End: Original strand, 37591371 - 37591409
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaa 99  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  37591371 ttatgtataaactatttctataataaaagataaaataaa 37591409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 63 - 101
Target Start/End: Original strand, 37841939 - 37841977
Alignment:
Q  63 atgtataaactatttctataacaaatgataaaataaagt 101  Q
    |||||||| ||||| ||||||||||||||||||||||||    
T  37841939 atgtataagctattcctataacaaatgataaaataaagt 37841977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 46499996 - 46499942
Alignment:
Q  50 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||| | |||| ||||| |||||||||||| ||| ||||||||||||||||    
T  46499996 catataagtgcttatctataagctatttctataagaaaagataaaataaagtcaa 46499942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 204
Target Start/End: Complemental strand, 49692064 - 49692014
Alignment:
Q  154 tatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa 204  Q
    ||||||||||||||||||| ||| || ||||||||||||||| | ||||||    
T  49692064 tatggacatgtcataagctattttcataagttctctcaaacagtctcacaa 49692014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 4202302 - 4202217
Alignment:
Q  19 gtttggataaacaacttaactaaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||||| |||||||| ||| |  ||| |||||||| | ||| ||||||  ||||||||||||||| ||||||  ||||||||    
T  4202302 gtttggataagcaacttaattaagcgtttatcatataagtgcttaagtataagttatttctataacaaaagataaaccaaagtcaa 4202217  T

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Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 259
Target Start/End: Original strand, 6292549 - 6292652
Alignment:
Q  152 cttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaacag 251  Q
    |||||| ||||||||||||||||||  | || ||||| |||||||| ||   | ||||| ||||||||||||||||||| ||||||  || ||||||||     
T  6292549 cttatgaacatgtcataagctgttt-taaaaattctcccaaacaatctc---aaaagtgcttatgtcagtagataagctcaaataagtcaatccaaacaa 6292644  T
Q  252 accttaag 259  Q
    ||| ||||    
T  6292645 accataag 6292652  T

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Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 16980823 - 16980900
Alignment:
Q  116 aagctacaagttgttttcataagctattctggagaacttatggacatgtcataagctgtttccacaagttctctcaaa 193  Q
    |||||| ||| ||||||||| |||||||||||| |  ||||| | ||||| |||| |||||||| ||| |||||||||    
T  16980823 aagctataagctgttttcattagctattctggaaagtttatgaaaatgtcgtaagttgtttccataagctctctcaaa 16980900  T

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Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 102
Target Start/End: Original strand, 17420142 - 17420183
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtc 102  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||    
T  17420142 ttatgtataaactatttttataagaaaagataaaataaagtc 17420183  T

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Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 179
Target Start/End: Original strand, 27145975 - 27146004
Alignment:
Q  150 aacttatggacatgtcataagctgtttcca 179  Q
    ||||||||||||||||||||||||||||||    
T  27145975 aacttatggacatgtcataagctgtttcca 27146004  T

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Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 29793663 - 29793630
Alignment:
Q  204 acaagtgtttatgtcagtagataagcttaaataa 237  Q
    ||||||||||||||||||||||||||| ||||||    
T  29793663 acaagtgtttatgtcagtagataagctcaaataa 29793630  T

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Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 33339588 - 33339511
Alignment:
Q  24 gataaacaacttaactaaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagt 101  Q
    |||||||||||||| |||   |||| |||||| | | |||||||||| ||||||||||| |||| |||||||| ||||    
T  33339588 gataaacaacttaattaagtggttatcatataggtgtttatgtataagctatttctataccaaaagataaaatgaagt 33339511  T

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Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 104
Target Start/End: Complemental strand, 45999417 - 45999376
Alignment:
Q  63 atgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    |||||||| |||||||||||||||| ||||| ||||||||||    
T  45999417 atgtataagctatttctataacaaaagataagataaagtcaa 45999376  T

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Target: scaffold0508 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 193
Target Start/End: Complemental strand, 9840 - 9772
Alignment:
Q  125 gttgttttcataagctattctggagaacttatggacatgtcataagctgtttccacaagttctctcaaa 193  Q
    ||||||||||||| |||| | ||| |||||||||||||||||||| |||||| || ||  |||||||||    
T  9840 gttgttttcataatctatcccggacaacttatggacatgtcataaactgttttcataaactctctcaaa 9772  T

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Target: scaffold0091 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 102
Target Start/End: Original strand, 5936 - 5999
Alignment:
Q  39 taaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtc 102  Q
    |||||| ||| |||||||| | |||||||||||| ||||| |||||||| |||||||| |||||    
T  5936 taaacatttatcatataagtgtttatgtataaacaatttcaataacaaaagataaaatcaagtc 5999  T

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Target: scaffold0053 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 104
Target Start/End: Original strand, 20118 - 20161
Alignment:
Q  61 ttatgtataaactatttctataacaaatgataaaataaagtcaa 104  Q
    ||||||||| |||||||||||||| || ||||||||||||||||    
T  20118 ttatgtatatactatttctataaccaaagataaaataaagtcaa 20161  T

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Target: scaffold0110 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 130 - 172
Target Start/End: Complemental strand, 35855 - 35813
Alignment:
Q  130 tttcataagctattctggagaacttatggacatgtcataagct 172  Q
    |||||||| |||| ||||||| |||||||||||||||||||||    
T  35855 tttcataaactatcctggagagcttatggacatgtcataagct 35813  T

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Target: scaffold0020 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 251
Target Start/End: Complemental strand, 159987 - 159891
Alignment:
Q  152 cttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaacag 251  Q
    ||||| |||||||||||| |||||||||  |||||||  ||| | | ||   |||||||||||| | |||||||||||| |||||| ||| |||||||||    
T  159987 cttatagacatgtcataaactgtttccattagttctccaaaatagtttc---acaagtgtttatattagtagataagctcaaataagccaatccaaacag 159891  T

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