View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17373_low_10 (Length: 418)
Name: NF17373_low_10
Description: NF17373
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17373_low_10 |
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Alignment Details
Target: chr2 (Bit Score: 370; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 13 - 402
Target Start/End: Complemental strand, 10760508 - 10760119
Alignment:
| Q |
13 |
tgaaccggttcttgagtgagacgaggttttgagtcatcatctgaagagtaaacacattgaaggtcatgtttggtgtgatagcgaaaagataaagggtagt |
112 |
Q |
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| T |
10760508 |
tgaaccggttcttgagtgagacgaggttttgagtcatgatctgaagagtaaacacattgaaggtcacgtttggtgtgatagcgaaaagataaagggtagt |
10760409 |
T |
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| Q |
113 |
ttaagaacattaaaacatgatcaggaagcataactgtttcccgaattgtgatttggggtggcactggagttggccatttcaaagctgcaattgggatgtg |
212 |
Q |
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| T |
10760408 |
ttaagaaaattaaaacatgatcaggaagcaaaactgtttcccgaattgtgatttggggtggcactggagttggccatttcaaagctgcaattgggatgtg |
10760309 |
T |
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| Q |
213 |
aaatcgagggaggtagaaggggtggatggatgaaataattagggaggtaaagataatggaagataagacaaccacaatagtgaaccagaagaatgtgctc |
312 |
Q |
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| T |
10760308 |
aaatcgagggaggtagaaggggtggatggatgaaataattagggaggtaaagataatggaagataagacaaccacaatagtgaaccaaaagaatgtgctc |
10760209 |
T |
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| Q |
313 |
catgaaatggctctgctatgttttctatgatctttcatgagagaaacccaaaacgagaagaaaaatgtaatagtaatgttctttgggttg |
402 |
Q |
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| T |
10760208 |
catgaaatggctctgctatgttttctatgatctttcatgagagaaacccaaaacgagaagaaaaatgtaatagtaatgttctttgggttg |
10760119 |
T |
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