View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17373_low_23 (Length: 268)
Name: NF17373_low_23
Description: NF17373
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17373_low_23 |
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Alignment Details
Target: chr3 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 44419387 - 44419141
Alignment:
| Q |
1 |
aattattggcaactccaataaataagtgaaaatcttgaccaaaattccagtcatacgaggagctgaatgcaattgagaaaatcattagcattttgtttgc |
100 |
Q |
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| T |
44419387 |
aattattggcaactccaataaataagtgaaaatcttgaccaaaattccagtcatacgaggagctgaatgcaattgagaaaatcattagcattttgtttgc |
44419288 |
T |
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| Q |
101 |
atgcataaccattgaaagcaaataaagtttttagaagtgacaatattaatggtaatgtattgcacgtttagaatcttgtgtaagaaaaccatcaccaaac |
200 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
44419287 |
atgcataaccatcgaaagcaaataaagtttttagaagtgacaatattaatggtaatgtattgcacgtttagaatcttgtgtaagaaaaccat-tccaaac |
44419189 |
T |
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| Q |
201 |
aaataccaacagaatgagaaaacaagaagctataaatgagaatgcatt |
248 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44419188 |
aaataccaacagaatgagaaaacaagaagctataaatgagaatgcatt |
44419141 |
T |
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