View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17373_low_8 (Length: 435)
Name: NF17373_low_8
Description: NF17373
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17373_low_8 |
 | |
|
| [»] scaffold0067 (1 HSPs) |
| | |
|
| [»] scaffold0912 (1 HSPs) |
| | |
|
| [»] scaffold0043 (1 HSPs) |
| | |
|
Alignment Details
Target: chr5 (Bit Score: 308; Significance: 1e-173; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 17 - 420
Target Start/End: Original strand, 26028173 - 26028576
Alignment:
| Q |
17 |
tacagcctttgtgattgtcactgtatggaatccctattacattaaaatcgatatctccccacacatcatccaatattagaagaatcttctcaccattggt |
116 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
26028173 |
tacagcctttgtgattgccactgtatggaatccctagttcattaaaatcgatatctccccacacatcatccaatattagaagaatcttcttaccattggt |
26028272 |
T |
|
| Q |
117 |
taatctgctccatagttttttgggtcggtctgattcattacagtcatcaatgttcaatcccaagggtccagcaatatcatcttgaatctttttgatatca |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
26028273 |
taatctgctccatagttttttgggtcggtctgaatcattacagtcatcaaatttcaatcccaagggtccagcaacatcatcttgaatctttttgatatca |
26028372 |
T |
|
| Q |
217 |
ggagaaaatgacactgtcgtgtcaatgatttgagtaaattgtttggattgctttagttccttacccactttgttgaccaatgtagtttttcctgtgcccc |
316 |
Q |
| |
|
||||||||||||| ||||||||| ||||||||||||||||| ||||| |||||||||| ||||||||| | ||||||| ||||||||||| |||||||| |
|
|
| T |
26028373 |
ggagaaaatgacattgtcgtgtcgatgatttgagtaaattggttggactgctttagtttcttacccacctccttgaccattgtagtttttcttgtgcccc |
26028472 |
T |
|
| Q |
317 |
ccatcccttgcaacccgattatataattgttgtcatctttcagtacattcaaaagctctatgtatttggattctctacttttaaatgaaatatagtgttg |
416 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||| |||||||| |||||||||||||| |
|
|
| T |
26028473 |
ccatcccttgtaacccgattatataattgttgtcgtctttcagtacattcaaaagctcaatgtatttagattctctgcttttaaaagaaatatagtgttg |
26028572 |
T |
|
| Q |
417 |
agat |
420 |
Q |
| |
|
|||| |
|
|
| T |
26028573 |
agat |
26028576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 304; Significance: 1e-171; HSPs: 37)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 13 - 416
Target Start/End: Complemental strand, 28176599 - 28176196
Alignment:
| Q |
13 |
attctacagcctttgtgattgtcactgtatggaatccctattacattaaaatcgatatctccccacacatcatccaatattagaagaatcttctcaccat |
112 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
28176599 |
attctacagcctttgtgattgtcactgtatggaatccctatttcattaaaatcgatgtctccccacacatcatccaatattagaagaatcttttcaccat |
28176500 |
T |
|
| Q |
113 |
tggttaatctgctccatagttttttgggtcggtctgattcattacagtcatcaatgttcaatcccaagggtccagcaatatcatcttgaatctttttgat |
212 |
Q |
| |
|
||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
28176499 |
tggttaacctgctccatagttttttgggtctgtctgattcattacagtcatcaaatttcaatcccaagggtccagcaatatcatcttgaatgtttttgat |
28176400 |
T |
|
| Q |
213 |
atcaggagaaaatgacactgtcgtgtcaatgatttgagtaaattgtttggattgctttagttccttacccactttgttgaccaatgtagtttttcctgtg |
312 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| |||| ||| |||||||||||||||||||| |
|
|
| T |
28176399 |
atcaggagaaaatgacactgtcgtgtcaattatttgagtaaattgtttggactgcttaagttccttaccaacttctttggccaatgtagtttttcctgtg |
28176300 |
T |
|
| Q |
313 |
ccccccatcccttgcaacccgattatataattgttgtcatctttcagtacattcaaaagctctatgtatttggattctctacttttaaatgaaatatagt |
412 |
Q |
| |
|
|||||||| |||| ||||||||||| |||||||||||||||||||| | ||| |||||||||| ||||||||||||| ||||||||||| | |||||||| |
|
|
| T |
28176299 |
ccccccattcctttcaacccgattacataattgttgtcatctttcaatgcatccaaaagctctttgtatttggattccctacttttaaaaggaatatagt |
28176200 |
T |
|
| Q |
413 |
gttg |
416 |
Q |
| |
|
|||| |
|
|
| T |
28176199 |
gttg |
28176196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 13 - 416
Target Start/End: Complemental strand, 28077976 - 28077573
Alignment:
| Q |
13 |
attctacagcctttgtgattgtcactgtatggaatccctattacattaaaatcgatatctccccacacatcatccaatattagaagaatcttctcaccat |
112 |
Q |
| |
|
|||||||||||| ||||||| |||| | ||||||||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
28077976 |
attctacagcctctgtgattaccactatctggaatccctatttcatcaaaattgatatctccccacacatcatctaatattagaagaatcttctcaccat |
28077877 |
T |
|
| Q |
113 |
tggttaatctgctccatagttttttgggtcggtctgattcattacagtcatcaatgttcaatcccaagggtccagcaatatcatcttgaatctttttgat |
212 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28077876 |
tggttaatctgctccatagttttttgggtctgtctgattcattacggtcatcaaatttcaatcccaagggtccagcaatatcatcttgaatctttttgat |
28077777 |
T |
|
| Q |
213 |
atcaggagaaaatgacactgtcgtgtcaatgatttgagtaaattgtttggattgctttagttccttacccactttgttgaccaatgtagtttttcctgtg |
312 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||| ||||||||||| |||| ||| |||||||||||||||||||| |
|
|
| T |
28077776 |
atcaggagaaaatgacactgtcgtgtcaattatttgagtaaattgttgggactgcttaagttccttaccaacttctttggccaatgtagtttttcctgtg |
28077677 |
T |
|
| Q |
313 |
ccccccatcccttgcaacccgattatataattgttgtcatctttcagtacattcaaaagctctatgtatttggattctctacttttaaatgaaatatagt |
412 |
Q |
| |
|
|||||||| |||| ||||||||||| |||||||||||||||||||| | ||| |||||||||| ||| ||||||||| ||||||||||| | |||||||| |
|
|
| T |
28077676 |
ccccccattcctttcaacccgattacataattgttgtcatctttcaatgcatccaaaagctctttgtgtttggattccctacttttaaaaggaatatagt |
28077577 |
T |
|
| Q |
413 |
gttg |
416 |
Q |
| |
|
|||| |
|
|
| T |
28077576 |
gttg |
28077573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 17 - 416
Target Start/End: Original strand, 28514880 - 28515279
Alignment:
| Q |
17 |
tacagcctttgtgattgtcactgtatggaatccctattacattaaaatcgatatctccccacacatcatccaatattagaagaatcttctcaccattggt |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||| || ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
28514880 |
tacagcctttgtgattgtcactgtatggaataccaatttcattaaaatcaatatctccccacacatcatccaatattagaagaatcttctcttcattggt |
28514979 |
T |
|
| Q |
117 |
taatctgctccatagttttttgggtcggtctgattcattacagtcatcaatgttcaatcccaagggtccagcaatatcatcttgaatctttttgatatca |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||||||||||||||||| |||||||| |
|
|
| T |
28514980 |
taatctgctccatagttttttgggtcggtctgattcactacagtcaccaaatttcaatcccaagggtcctgcaatatcatcttgaatcttcctgatatca |
28515079 |
T |
|
| Q |
217 |
ggagaaaatgacactgtcgtgtcaatgatttgagtaaattgtttggattgctttagttccttacccactttgttgaccaatgtagtttttcctgtgcccc |
316 |
Q |
| |
|
||||| |||||||||||||| || |||| | | ||||||||||||| ||||| ||||||||||| |||| ||| ||||||||||||||||||| |||| |
|
|
| T |
28515080 |
ggagataatgacactgtcgtatcgatgacgtaactaaattgtttggactgcttaagttccttaccaacttctttggccaatgtagtttttcctgttcccc |
28515179 |
T |
|
| Q |
317 |
ccatcccttgcaacccgattatataattgttgtcatctttcagtacattcaaaagctctatgtatttggattctctacttttaaatgaaatatagtgttg |
416 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||| ||||| || |||||||| | |||||||||||| |
|
|
| T |
28515180 |
ccatcccttgcaacccgattatataattgttgtcatctttcagagcatctaaaagctctttgtatttagattccctgcttttaaaaggaatatagtgttg |
28515279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 13 - 413
Target Start/End: Original strand, 27465908 - 27466311
Alignment:
| Q |
13 |
attctacagcctttgtgattgtcactgtatggaatccctattacattaaaatcgatatctccccac---acatcatccaatattagaagaatcttctcac |
109 |
Q |
| |
|
|||||||||||||||||||| ||||| | ||||||||||||| ||| ||||| ||||||||||||| |||||||||||||||||||| |||||||| | |
|
|
| T |
27465908 |
attctacagcctttgtgattatcactatgtggaatccctatttcatcaaaattgatatctccccaccacacatcatccaatattagaaggatcttctcgc |
27466007 |
T |
|
| Q |
110 |
cattggttaatctgctccatagttttttgggtcggtctgattcattacagtcatcaatgttcaatcccaagggtccagcaatatcatcttgaatcttttt |
209 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||| |||||||| || ||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
27466008 |
cattggttaatctactccatagttttttgggtcggtctgattcactacagtcaaaaaaattcaatcccaaggatccagcaatatcatcttgaatcttttt |
27466107 |
T |
|
| Q |
210 |
gatatcaggagaaaatgacactgtcgtgtcaatgatttgagtaaattgtttggattgctttagttccttacccactttgttgaccaatgtagtttttcct |
309 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||| || |||||||||||||||| ||| |||||||||||||||| ||| ||||||||||||||||| |
|
|
| T |
27466108 |
aatatcaggagaaaacgacactgtcgtatcaatgacgtgggtaaattgtttggatttcttaagttccttacccacttctttggccaatgtagtttttcct |
27466207 |
T |
|
| Q |
310 |
gtgccccccatcccttgcaacccgattatataattgttgtcatctttcagtacattcaaaagctctatgtatttggattctctacttttaaatgaaatat |
409 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| ||||||||| ||| ||||||||| ||||||||||||| ||||||| ||| ||||||| |
|
|
| T |
27466208 |
gtgccccccatcccttgcaacccggttatataattgttgcaatctttcagagcatctaaaagctctttgtatttggattccctactttcaaaagaaatat |
27466307 |
T |
|
| Q |
410 |
agtg |
413 |
Q |
| |
|
|||| |
|
|
| T |
27466308 |
agtg |
27466311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 13 - 358
Target Start/End: Complemental strand, 11407366 - 11407021
Alignment:
| Q |
13 |
attctacagcctttgtgattgtcactgtatggaatccctattacattaaaatcgatatctccccacacatcatccaatattagaagaatcttctcaccat |
112 |
Q |
| |
|
||||||||||||||| ||| |||||| | |||||||||||| | | ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11407366 |
attctacagcctttgagatagtcactatcaggaatccctatttcgtcaaaattgatatctccccacacatcatccaatattagaagaatcttctcaccat |
11407267 |
T |
|
| Q |
113 |
tggttaatctgctccatagttttttgggtcggtctgattcattacagtcatcaatgttcaatcccaagggtccagcaatatcatcttgaatctttttgat |
212 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||| |
|
|
| T |
11407266 |
tggttaatctgctccatagtattttgtgtcggtctgattcattacagtcatcaaatttcaatcccaagggtcgagcaatatcatcttgaatctttctgat |
11407167 |
T |
|
| Q |
213 |
atcaggagaaaatgacactgtcgtgtcaatgatttgagtaaattgtttggattgctttagttccttacccactttgttgaccaatgtagtttttcctgtg |
312 |
Q |
| |
|
|||||||||||||||||||||||||| || |||||||||||||||||||| ||||| |||| | ||| ||||| | ||||||||||||||||||||| |
|
|
| T |
11407166 |
atcaggagaaaatgacactgtcgtgtggataatttgagtaaattgtttggaatgcttaagttacatacacacttcaataaccaatgtagtttttcctgtg |
11407067 |
T |
|
| Q |
313 |
ccccccatcccttgcaacccgattatataattgttgtcatctttca |
358 |
Q |
| |
|
||||||||||| ||||||||||||||| |||||||||||||||||| |
|
|
| T |
11407066 |
ccccccatcccatgcaacccgattataaaattgttgtcatctttca |
11407021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 13 - 401
Target Start/End: Complemental strand, 27908367 - 27907979
Alignment:
| Q |
13 |
attctacagcctttgtgattgtcactgtatggaatccctattacattaaaatcgatatctccccacacatcatccaatattagaagaatcttctcaccat |
112 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| || ||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27908367 |
attctacagcctttgtgattgtcactgtatggaataccaatttcattaaaatcaatatttccccacacatcatccaatattagaagaatcttctcaccat |
27908268 |
T |
|
| Q |
113 |
tggttaatctgctccatagttttttgggtcggtctgattcattacagtcatcaatgttcaatcccaagggtccagcaatatcatcttgaatctttttgat |
212 |
Q |
| |
|
|||||||||||||||||||| ||||||||| ||||||||||||||||||||||| | ||||||||| | || |||||||||||||||||||||||||| |
|
|
| T |
27908267 |
tggttaatctgctccatagtattttgggtctgtctgattcattacagtcatcaagttccaatcccaaagctctggcaatatcatcttgaatctttttgat |
27908168 |
T |
|
| Q |
213 |
atcaggagaaaatgacactgtcgtgtcaatgatttgagtaaattgtttggattgctttagttccttacccactttgttgaccaatgtagtttttcctgtg |
312 |
Q |
| |
|
||||||| ||| ||||||| | || || ||||||||||||||||||||||| ||||| ||||||||||| |||| ||| |||| ||||||||||||||| |
|
|
| T |
27908167 |
atcaggaaaaagtgacactattgtatcgatgatttgagtaaattgtttggactgcttaagttccttaccaacttctttggccaacgtagtttttcctgtg |
27908068 |
T |
|
| Q |
313 |
ccccccatcccttgcaacccgattatataattgttgtcatctttcagtacattcaaaagctctatgtatttggattctctacttttaaa |
401 |
Q |
| |
|
||||||||||||||||| || |||||||||||||||||||||||| | ||| ||||||| | ||||||| |||| || |||||||| |
|
|
| T |
27908067 |
ccccccatcccttgcaagccagttatataattgttgtcatctttcaatgcatccaaaagcattctgtattttaattccctgcttttaaa |
27907979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 13 - 416
Target Start/End: Original strand, 28499309 - 28499712
Alignment:
| Q |
13 |
attctacagcctttgtgattgtcactgtatggaatccctattacattaaaatcgatatctccccacacatcatccaatattagaagaatcttctcaccat |
112 |
Q |
| |
|
|||||||| || ||||| |||||||||||||| || || ||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
28499309 |
attctacaacccttgtggttgtcactgtatgggataccaatttcattaaaatcaatatctccccacacatcatccaatattagaagaatcttttcaccat |
28499408 |
T |
|
| Q |
113 |
tggttaatctgctccatagttttttgggtcggtctgattcattacagtcatcaatgttcaatcccaagggtccagcaatatcatcttgaatctttttgat |
212 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
28499409 |
tggttaatctcttccatagttttttgggtcggtctgattcactacagtcaccaaatttcaatcccaagggtcctgcaatatcatcttgaatcttcctgat |
28499508 |
T |
|
| Q |
213 |
atcaggagaaaatgacactgtcgtgtcaatgatttgagtaaattgtttggattgctttagttccttacccactttgttgaccaatgtagtttttcctgtg |
312 |
Q |
| |
|
| |||||| ||||||| ||||| || |||| ||||||||||||||||| ||||| ||||||||||| |||| || |||||||||||||||||||| |
|
|
| T |
28499509 |
gttaggagataatgacatcgtcgtatcgatgacgtgagtaaattgtttggactgcttaagttccttaccaacttctctggccaatgtagtttttcctgtg |
28499608 |
T |
|
| Q |
313 |
ccccccatcccttgcaacccgattatataattgttgtcatctttcagtacattcaaaagctctatgtatttggattctctacttttaaatgaaatatagt |
412 |
Q |
| |
|
||||||||||||||||||||| ||||| |||||||||||||||||| ||| ||||||||| ||||||||||||| ||||||||||| | |||||||| |
|
|
| T |
28499609 |
ccccccatcccttgcaacccggttataaaattgttgtcatctttcatagcatctaaaagctctttgtatttggattccctacttttaaaaggaatatagt |
28499708 |
T |
|
| Q |
413 |
gttg |
416 |
Q |
| |
|
|||| |
|
|
| T |
28499709 |
gttg |
28499712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 13 - 358
Target Start/End: Complemental strand, 27950750 - 27950405
Alignment:
| Q |
13 |
attctacagcctttgtgattgtcactgtatggaatccctattacattaaaatcgatatctccccacacatcatccaatattagaagaatcttctcaccat |
112 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||| ||| ||||| |||| |||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
27950750 |
attctacagcctttgtgattgtcactgtcaggaatccctatttcatcaaaattgataactccccacacatcatccaatattagaagaatcttctcaccgt |
27950651 |
T |
|
| Q |
113 |
tggttaatctgctccatagttttttgggtcggtctgattcattacagtcatcaatgttcaatcccaagggtccagcaatatcatcttgaatctttttgat |
212 |
Q |
| |
|
|||||||| | ||| ||||||||||||||||||||||||| ||||||| | || ||||||| ||| |||| |||||||||||| |||||||||||||| |
|
|
| T |
27950650 |
tggttaatgtcttccgtagttttttgggtcggtctgattcactacagtctttaaaattcaatctcaaaggtctagcaatatcatcctgaatctttttgat |
27950551 |
T |
|
| Q |
213 |
atcaggagaaaatgacactgtcgtgtcaatgatttgagtaaattgtttggattgctttagttccttacccactttgttgaccaatgtagtttttcctgtg |
312 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||| |||| ||| |||| |||||||||||||| |
|
|
| T |
27950550 |
atcaggagaaaatgacactgtcgtgtcgatgatttgagtaaattgtttggactgcttaagttccttaccaacttctttggccaacatagtttttcctgtg |
27950451 |
T |
|
| Q |
313 |
ccccccatcccttgcaacccgattatataattgttgtcatctttca |
358 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
27950450 |
ccccccatccctttcaacccgattacataattgttgtcatctttca |
27950405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 13 - 416
Target Start/End: Original strand, 17750880 - 17751283
Alignment:
| Q |
13 |
attctacagcctttgtgattgtcactgtatggaatccctattacattaaaatcgatatctccccacacatcatccaatattagaagaatcttctcaccat |
112 |
Q |
| |
|
||||||||||| ||||||| | |||| | ||||||||||||| || ||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
17750880 |
attctacagccattgtgatcgccactttgtggaatccctatttcaacaaaattgatatctccccacacatcatccagtattagaagaatcttctcaccat |
17750979 |
T |
|
| Q |
113 |
tggttaatctgctccatagttttttgggtcggtctgattcattacagtcatcaatgttcaatcccaagggtccagcaatatcatcttgaatctttttgat |
212 |
Q |
| |
|
|||||||||| ||||||||||| || ||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
17750980 |
tggttaatctactccatagtttcttcggtcggtctgattcactacagtcattaaatttcaatcccaagggtccagcaatatcatcttgaatcttactgat |
17751079 |
T |
|
| Q |
213 |
atcaggagaaaatgacactgtcgtgtcaatgatttgagtaaattgtttggattgctttagttccttacccactttgttgaccaatgtagtttttcctgtg |
312 |
Q |
| |
|
|| | ||| ||||||| |||||| ||||||| | |||||||| |||||||||||| ||||||||||| |||| || |||||||||||||||||||| |
|
|
| T |
17751080 |
attaaaagataatgacattgtcgtatcaatgacgtaagtaaattttttggattgcttaagttccttaccaacttcttttgccaatgtagtttttcctgtg |
17751179 |
T |
|
| Q |
313 |
ccccccatcccttgcaacccgattatataattgttgtcatctttcagtacattcaaaagctctatgtatttggattctctacttttaaatgaaatatagt |
412 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||||||||||||||| | || |||||||||| ||||| | |||||||| |||||||| | |||||||| |
|
|
| T |
17751180 |
ccccccatccctttcaacccgattacataattgttgtcatctttcaatgaatccaaaagctctttgtatcttgattctctgcttttaaagggaatatagt |
17751279 |
T |
|
| Q |
413 |
gttg |
416 |
Q |
| |
|
|||| |
|
|
| T |
17751280 |
gttg |
17751283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 13 - 416
Target Start/End: Original strand, 19052200 - 19052603
Alignment:
| Q |
13 |
attctacagcctttgtgattgtcactgtatggaatccctattacattaaaatcgatatctccccacacatcatccaatattagaagaatcttctcaccat |
112 |
Q |
| |
|
||||||||||| ||||||| | |||| | ||||||||||||| || ||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
19052200 |
attctacagccattgtgatcgccactttgtggaatccctatttcaacaaaattgatatctccccacacatcatccagtattagaagaatcttctcaccat |
19052299 |
T |
|
| Q |
113 |
tggttaatctgctccatagttttttgggtcggtctgattcattacagtcatcaatgttcaatcccaagggtccagcaatatcatcttgaatctttttgat |
212 |
Q |
| |
|
|||||||||| ||||||||||| || ||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
19052300 |
tggttaatctactccatagtttcttcggtcggtctgattcactacagtcattaaatttcaatcccaagggtccagcaatatcatcttgaatcttactgat |
19052399 |
T |
|
| Q |
213 |
atcaggagaaaatgacactgtcgtgtcaatgatttgagtaaattgtttggattgctttagttccttacccactttgttgaccaatgtagtttttcctgtg |
312 |
Q |
| |
|
|| | ||| ||||||| |||||| ||||||| | |||||||| |||||||||||| ||||||||||| |||| || |||||||||||||||||||| |
|
|
| T |
19052400 |
attaaaagataatgacattgtcgtatcaatgacgtaagtaaattttttggattgcttaagttccttaccaacttcttttgccaatgtagtttttcctgtg |
19052499 |
T |
|
| Q |
313 |
ccccccatcccttgcaacccgattatataattgttgtcatctttcagtacattcaaaagctctatgtatttggattctctacttttaaatgaaatatagt |
412 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||||||||||||||| | || |||||||||| ||||| | |||||||| |||||||| | |||||||| |
|
|
| T |
19052500 |
ccccccatccctttcaacccgattacataattgttgtcatctttcaatgaatccaaaagctctttgtatcttgattctctgcttttaaagggaatatagt |
19052599 |
T |
|
| Q |
413 |
gttg |
416 |
Q |
| |
|
|||| |
|
|
| T |
19052600 |
gttg |
19052603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 13 - 416
Target Start/End: Original strand, 28473857 - 28474260
Alignment:
| Q |
13 |
attctacagcctttgtgattgtcactgtatggaatccctattacattaaaatcgatatctccccacacatcatccaatattagaagaatcttctcaccat |
112 |
Q |
| |
|
|||||||| || ||||| |||||||||||||| || || ||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
28473857 |
attctacatcccttgtggttgtcactgtatgggataccaatttcattaaaatcaatatctccccacacatcatccaatattagaagaatcttttcaccat |
28473956 |
T |
|
| Q |
113 |
tggttaatctgctccatagttttttgggtcggtctgattcattacagtcatcaatgttcaatcccaagggtccagcaatatcatcttgaatctttttgat |
212 |
Q |
| |
|
|||||||||| |||||||||||||||| |||||||||||| |||||||||||| |||||| |||| ||||||||||||||| |||||||||| | || |
|
|
| T |
28473957 |
tggttaatctcttccatagttttttgggccggtctgattcagtacagtcatcaaatttcaattccaactgtccagcaatatcattttgaatctttctaat |
28474056 |
T |
|
| Q |
213 |
atcaggagaaaatgacactgtcgtgtcaatgatttgagtaaattgtttggattgctttagttccttacccactttgttgaccaatgtagtttttcctgtg |
312 |
Q |
| |
|
||||||||| |||||||||||||| || | || |||||||||||||||||||| |||||||||||||||| || || |||||||||||||||| |
|
|
| T |
28474057 |
atcaggagataatgacactgtcgtatcgacgacgctggtaaattgtttggattgcttaagttccttacccacttctatggacattgtagtttttcctgtg |
28474156 |
T |
|
| Q |
313 |
ccccccatcccttgcaacccgattatataattgttgtcatctttcagtacattcaaaagctctatgtatttggattctctacttttaaatgaaatatagt |
412 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||||||||||||||||| ||| ||||||||| ||||||||||||| ||||||||||| | |||||||| |
|
|
| T |
28474157 |
ccccccatcccttgcaacccggttataaaattgttgtcatctttcagagcatctaaaagctctttgtatttggattccctacttttaaaaggaatatagt |
28474256 |
T |
|
| Q |
413 |
gttg |
416 |
Q |
| |
|
|||| |
|
|
| T |
28474257 |
gttg |
28474260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 13 - 416
Target Start/End: Complemental strand, 27961440 - 27961044
Alignment:
| Q |
13 |
attctacagcctttgtgattgtcactgtatggaatccctattacattaaaatcgatatctccccacacatcatccaatattagaagaatcttctcaccat |
112 |
Q |
| |
|
|||| ||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
27961440 |
attcgacaacctttgtgattgtcacgatatggaatccctatttcattaaaatcgatatctccccacacatcatccaatattataagaatcttctcaccat |
27961341 |
T |
|
| Q |
113 |
tggttaatctgctccatagttttttgggtcggtctgattcattacagtcatcaatgttcaatcccaagggtccagcaatatcatcttgaatctttttgat |
212 |
Q |
| |
|
||||||||||||||||||||||||| || || ||||||||| || ||| || ||||||| || | ||||||||||||||||||||||| || |
|
|
| T |
27961340 |
tggttaatctgctccatagttttttcggccgatctgattcaa-------atgaatagtcgatcccaaaggctcggcaatatcatcttgaatctttttaat |
27961248 |
T |
|
| Q |
213 |
atcaggagaaaatgacactgtcgtgtcaatgatttgagtaaattgtttggattgctttagttccttacccactttgttgaccaatgtagtttttcctgtg |
312 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||| ||||| ||||| |||| ||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
27961247 |
atcaggagaaaatgacactgctgtgtcaatgatttgagtaaatttcttggactgcttaagtttcttacccacttccttgaccattgtagtttttcctgtg |
27961148 |
T |
|
| Q |
313 |
ccccccatcccttgcaacccgattatataattgttgtcatctttcagtacattcaaaagctctatgtatttggattctctacttttaaatgaaatatagt |
412 |
Q |
| |
|
|||||||||||||||||||| | ||||| ||||||||||| |||| | ||| |||||||||| |||||||| |||| || |||||||| | |||||||| |
|
|
| T |
27961147 |
ccccccatcccttgcaacccagtcatatagttgttgtcatcattcaatgcatccaaaagctctttgtatttgaattccctgcttttaaaaggaatatagt |
27961048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 110 - 412
Target Start/End: Complemental strand, 28142341 - 28142039
Alignment:
| Q |
110 |
cattggttaatctgctccatagttttttgggtcggtctgattcattacagtcatcaatgttcaatcccaagggtccagcaatatcatcttgaatcttttt |
209 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||| |||||||||||||||||| | |
|
|
| T |
28142341 |
cattggttaatctgctccatagttttttgggtcggtctgattcactacagtcgtcaaatttcaatcccaagggtccagcgatatcatcttgaatctttct |
28142242 |
T |
|
| Q |
210 |
gatatcaggagaaaatgacactgtcgtgtcaatgatttgagtaaattgtttggattgctttagttccttacccactttgttgaccaatgtagtttttcct |
309 |
Q |
| |
|
|||||||||||| ||||||||||| || || |||| | ||||||||||||| ||||||| |||||||| |||||||| ||| ||||||||||||||||| |
|
|
| T |
28142241 |
gatatcaggagacaatgacactgttgtatcgatgacgttagtaaattgtttgcattgcttaagttccttccccacttttttggccaatgtagtttttcct |
28142142 |
T |
|
| Q |
310 |
gtgccccccatcccttgcaacccgattatataattgttgtcatctttcagtacattcaaaagctctatgtatttggattctctacttttaaatgaaatat |
409 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |||||||||||||||| ||| ||||||||| |||||||||||| |||||||| ||| ||||||| |
|
|
| T |
28142141 |
gtgccccccatcccttgcaacccggttatataactgttgtcatctttcagagcatcaaaaagctctttgtatttggattttctactttcaaaagaaatat |
28142042 |
T |
|
| Q |
410 |
agt |
412 |
Q |
| |
|
||| |
|
|
| T |
28142041 |
agt |
28142039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 111 - 412
Target Start/End: Complemental strand, 28128409 - 28128108
Alignment:
| Q |
111 |
attggttaatctgctccatagttttttgggtcggtctgattcattacagtcatcaatgttcaatcccaagggtccagcaatatcatcttgaatctttttg |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||| |||||||||||||||||| || |
|
|
| T |
28128409 |
attggttaatctgctccatagttttttgggtcggtctgattcaccacagtcgtcaaatttcaatcccaagggtccagcgatatcatcttgaatctttctg |
28128310 |
T |
|
| Q |
211 |
atatcaggagaaaatgacactgtcgtgtcaatgatttgagtaaattgtttggattgctttagttccttacccactttgttgaccaatgtagtttttcctg |
310 |
Q |
| |
|
||||||||||| ||||||||||| || || |||| | ||||||||||||| ||||||| |||||||| ||||||| ||| ||| |||||||||||||| |
|
|
| T |
28128309 |
atatcaggagacaatgacactgttgtatcgatgacgtaagtaaattgtttgaattgcttaagttccttccccacttctttggccattgtagtttttcctg |
28128210 |
T |
|
| Q |
311 |
tgccccccatcccttgcaacccgattatataattgttgtcatctttcagtacattcaaaagctctatgtatttggattctctacttttaaatgaaatata |
410 |
Q |
| |
|
||||||||||||||||||||||| |||||||| |||||||||||||||| ||| ||||||||| |||||||||||| |||||||| ||| |||||||| |
|
|
| T |
28128209 |
tgccccccatcccttgcaacccggttatataactgttgtcatctttcagagcatcaaaaagctctttgtatttggattttctactttcaaaagaaatata |
28128110 |
T |
|
| Q |
411 |
gt |
412 |
Q |
| |
|
|| |
|
|
| T |
28128109 |
gt |
28128108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 114 - 415
Target Start/End: Complemental strand, 28045890 - 28045589
Alignment:
| Q |
114 |
ggttaatctgctccatagttttttgggtcggtctgattcattacagtcatcaatgttcaatcccaagggtccagcaatatcatcttgaatctttttgata |
213 |
Q |
| |
|
||||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||| |||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
28045890 |
ggttaatctactccatagttttttgggtctgtctgattcattacagtcgtcaaatttcaattccaagggtacagcaatatcatcttgaatctttctgata |
28045791 |
T |
|
| Q |
214 |
tcaggagaaaatgacactgtcgtgtcaatgatttgagtaaattgtttggattgctttagttccttacccactttgttgaccaatgtagtttttcctgtgc |
313 |
Q |
| |
|
|||||||| ||||||| ||| || || |||| | ||||||||||||||| ||||| |||||||||||||||| ||| ||||||||||||||||||||| |
|
|
| T |
28045790 |
tcaggagacaatgacaatgttgtatcgatgacgtaagtaaattgtttggagtgcttaagttccttacccacttctttggccaatgtagtttttcctgtgc |
28045691 |
T |
|
| Q |
314 |
cccccatcccttgcaacccgattatataattgttgtcatctttcagtacattcaaaagctctatgtatttggattctctacttttaaatgaaatatagtg |
413 |
Q |
| |
|
|||||||||||||||||| | ||||||||||||||||||||||||| ||| ||||||||| |||||||| |||| ||||||| ||| ||||||||||| |
|
|
| T |
28045690 |
cccccatcccttgcaacctggttatataattgttgtcatctttcagagcatctaaaagctctttgtatttgaattccctactttcaaaagaaatatagtg |
28045591 |
T |
|
| Q |
414 |
tt |
415 |
Q |
| |
|
|| |
|
|
| T |
28045590 |
tt |
28045589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 13 - 416
Target Start/End: Complemental strand, 27997183 - 27996780
Alignment:
| Q |
13 |
attctacagcctttgtgattgtcactgtatggaatccctattacattaaaatcgatatctccccacacatcatccaatattagaagaatcttctcaccat |
112 |
Q |
| |
|
||||||||||||||||||||| |||| | ||||||||||||| || ||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
27997183 |
attctacagcctttgtgattgccactttgtggaatccctatttcaacaaaattgatatctccccacacatcatccagtattataagaatcttctcaccat |
27997084 |
T |
|
| Q |
113 |
tggttaatctgctccatagttttttgggtcggtctgattcattacagtcatcaatgttcaatcccaagggtccagcaatatcatcttgaatctttttgat |
212 |
Q |
| |
|
|||||||||| ||||||||||| | ||||||||||||||| |||||||||| | |||| ||| ||||||||||||||||| |||||||||| | || |
|
|
| T |
27997083 |
tggttaatctcttccatagttttctaggtcggtctgattcagtacagtcatcgaatttcacatccaggggtccagcaatatcattttgaatctttctaat |
27996984 |
T |
|
| Q |
213 |
atcaggagaaaatgacactgtcgtgtcaatgatttgagtaaattgtttggattgctttagttccttacccactttgttgaccaatgtagtttttcctgtg |
312 |
Q |
| |
|
|||| || ||||| |||||| ||||||| | |||||||||||||| | | |||||||||||||||| || ||| | |||||||||||||| |
|
|
| T |
27996983 |
atcaacggatgttgacattgtcgtatcaatgacgcatgcaaattgtttggattccataagttccttacccacttctatggccattctagtttttcctgtg |
27996884 |
T |
|
| Q |
313 |
ccccccatcccttgcaacccgattatataattgttgtcatctttcagtacattcaaaagctctatgtatttggattctctacttttaaatgaaatatagt |
412 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||||||||||||||| | | | |||||||||| |||||| |||||| ||||||||||||| |||||||| |
|
|
| T |
27996883 |
ccccccatccctatcaacccgattacataattgttgtcatctttcaatgcttccaaaagctctttgtattgggattccctacttttaaatgtaatatagt |
27996784 |
T |
|
| Q |
413 |
gttg |
416 |
Q |
| |
|
|||| |
|
|
| T |
27996783 |
gttg |
27996780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 13 - 414
Target Start/End: Original strand, 27436283 - 27436684
Alignment:
| Q |
13 |
attctacagcctttgtgattgtcactgtatggaatccctattacattaaaatcgatatctccccacacatcatccaatattagaagaatcttctcaccat |
112 |
Q |
| |
|
|||||||||||||||||| ||| | | | ||||||||||||| ||| ||||| ||||||||| ||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
27436283 |
attctacagcctttgtgactgtaaatatctggaatccctatttcatgaaaattgatatctccacacacatcatctaatattagaagaatcttctcaccat |
27436382 |
T |
|
| Q |
113 |
tggttaatctgctccatagttttttgggtcggtctgattcattacagtcatcaatgttcaatcccaagggtccagcaatatcatcttgaatctttttgat |
212 |
Q |
| |
|
||||||||||||||| ||||||| |||||| ||| | |||||| ||||||| | |||||||||||| | |||||||||||| |||||||||| | || |
|
|
| T |
27436383 |
tggttaatctgctccgtagttttctgggtctatctaactcattaaagtcatctaatttcaatcccaagcattcagcaatatcattttgaatctttctaat |
27436482 |
T |
|
| Q |
213 |
atcaggagaaaatgacactgtcgtgtcaatgatttgagtaaattgtttggattgctttagttccttacccactttgttgaccaatgtagtttttcctgtg |
312 |
Q |
| |
|
|| | ||| ||||||||| || |||||| | | |||||||||||||| ||| | | | |||||||||| || |||||||||||||||||||| |
|
|
| T |
27436483 |
attaacagatggtgacactgttgtagcaatgacgcgtgcaaattgtttggattccttaactgcgttacccacttcaatggccaatgtagtttttcctgtg |
27436582 |
T |
|
| Q |
313 |
ccccccatcccttgcaacccgattatataattgttgtcatctttcagtacattcaaaagctctatgtatttggattctctacttttaaatgaaatatagt |
412 |
Q |
| |
|
||||||||||| | ||||||| |||||||| ||| |||||||| | | ||| |||||||||| ||||||||||||| || |||||||| |||||||| |
|
|
| T |
27436583 |
ccccccatcccatacaacccggttatataactgtcttcatcttttaatgcatccaaaagctctttgtatttggattccctgcttttaaaatgaatatagt |
27436682 |
T |
|
| Q |
413 |
gt |
414 |
Q |
| |
|
|| |
|
|
| T |
27436683 |
gt |
27436684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 74 - 407
Target Start/End: Complemental strand, 26623001 - 26622668
Alignment:
| Q |
74 |
cccacacatcatccaatattagaagaatcttctcaccattggttaatctgctccatagttttttgggtcggtctgattcattacagtcatcaatgttcaa |
173 |
Q |
| |
|
||||||||||||||| ||| | |||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||| || || |||| |
|
|
| T |
26623001 |
cccacacatcatccattatcaaaagaattttttcaccatttgttaatctgctccatagttttttgggtcggtctgattcattacaatcctcccacatcaa |
26622902 |
T |
|
| Q |
174 |
tcccaagggtccagcaatatcatcttgaatctttttgatatcaggagaaaatgacactgtcgtgtcaatgatttgagtaaattgtttggattgctttagt |
273 |
Q |
| |
|
||| || ||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||| | ||||| |||| ||||||| |||||||||||| |
|
|
| T |
26622901 |
tcctaaaggtccagcaatatcatcttgaatcttttttataacaggagtaaatgacactgtcgtattaatgacatgagcgaattgttcagattgctttagt |
26622802 |
T |
|
| Q |
274 |
tccttacccactttgttgaccaatgtagtttttcctgtgccccccatcccttgcaacccgattatataattgttgtcatctttcagtacattcaaaagct |
373 |
Q |
| |
|
|| |||||||||| || ||||||||||||| | |||||||||||||||||||| ||| ||||||| |||||| ||||||| ||| ||| ||| | | |
|
|
| T |
26622801 |
tctttacccacttctatggccaatgtagttttcctagtgccccccatcccttgcaatccggttatatagttgttgccatcttttagtgcatccaacaatt |
26622702 |
T |
|
| Q |
374 |
ctatgtatttggattctctacttttaaatgaaat |
407 |
Q |
| |
|
|| ||||||| || ||||| |||||||| ||||| |
|
|
| T |
26622701 |
ctttgtattttgactctctgcttttaaaagaaat |
26622668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 74 - 382
Target Start/End: Original strand, 27402964 - 27403272
Alignment:
| Q |
74 |
cccacacatcatccaatattagaagaatcttctcaccattggttaatctgctccatagttttttgggtcggtctgattcattacagtcatcaatgttcaa |
173 |
Q |
| |
|
||||||| |||||||||||||||||||| |||||||| || ||||||||| |||||||||| | || || |||||||||||||| || || ||||| |
|
|
| T |
27402964 |
cccacacgtcatccaatattagaagaattttctcaccctttgttaatctgtcccatagttttctaggccgttctgattcattacaatcctcccatttcaa |
27403063 |
T |
|
| Q |
174 |
tcccaagggtccagcaatatcatcttgaatctttttgatatcaggagaaaatgacactgtcgtgtcaatgatttgagtaaattgtttggattgctttagt |
273 |
Q |
| |
|
||| || ||||||||||| ||||||||||||||||| |||||||||| ||| |||||||| || ||||||| ||| |||||| |||| ||||||| |
|
|
| T |
27403064 |
tcctaaaggtccagcaatgtcatcttgaatcttttttatatcaggagtaaacgacactgttgtatcaatgacacaagtgaattgtccagattcctttagt |
27403163 |
T |
|
| Q |
274 |
tccttacccactttgttgaccaatgtagtttttcctgtgccccccatcccttgcaacccgattatataattgttgtcatctttcagtacattcaaaagct |
373 |
Q |
| |
|
|| ||||||||||| || |||| ||||||||||| ||||| |||||||||||||| ||| ||||||| |||||||||||||||||| ||| ||| || | |
|
|
| T |
27403164 |
tctttacccacttttatggccaaagtagtttttccggtgccacccatcccttgcaatccggttatatagttgttgtcatctttcagtgcatccaacagtt |
27403263 |
T |
|
| Q |
374 |
ctatgtatt |
382 |
Q |
| |
|
|| |||||| |
|
|
| T |
27403264 |
ctttgtatt |
27403272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 74 - 360
Target Start/End: Original strand, 18033321 - 18033607
Alignment:
| Q |
74 |
cccacacatcatccaatattagaagaatcttctcaccattggttaatctgctccatagttttttgggtcggtctgattcattacagtcatcaatgttcaa |
173 |
Q |
| |
|
||||||| ||||||||||| |||||||| ||||||||||| |||||||| |||||||||| ||| |||||||||||||| ||| | || | ||| |
|
|
| T |
18033321 |
cccacacgtcatccaatatcagaagaattttctcaccatttcttaatctgtcccatagttttccgggccggtctgattcattgatgtccttaagttccaa |
18033420 |
T |
|
| Q |
174 |
tcccaagggtccagcaatatcatcttgaatctttttgatatcaggagaaaatgacactgtcgtgtcaatgatttgagtaaattgtttggattgctttagt |
273 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| ||||| | ||| |||||| ||||| ||||||| |
|
|
| T |
18033421 |
tcctaagggtccagcaatatcatcttgaatcttttttatatcaggagtagatgacactgtcgtaacaatggcataagtgaattgtccggattcctttagt |
18033520 |
T |
|
| Q |
274 |
tccttacccactttgttgaccaatgtagtttttcctgtgccccccatcccttgcaacccgattatataattgttgtcatctttcagt |
360 |
Q |
| |
|
|| |||||||||| || |||| ||||||||||| ||||| |||||||||||||| ||| ||||||| |||||||||||||||||| |
|
|
| T |
18033521 |
tctatacccacttttatggccaaagtagtttttccggtgccacccatcccttgcaatccggttatatagttgttgtcatctttcagt |
18033607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 22 - 375
Target Start/End: Original strand, 18724889 - 18725242
Alignment:
| Q |
22 |
cctttgtgattgtcactgtatggaatccctattacattaaaatcgatatctccccacacatcatccaatattagaagaatcttctcaccattggttaatc |
121 |
Q |
| |
|
||||||||||| ||||| | |||||||||||| ||| ||||| || || ||||||||||| ||||||||| || ||||| ||||||||||||||||||| |
|
|
| T |
18724889 |
cctttgtgattatcactctttggaatccctatgtcatcaaaattgagatttccccacacattatccaatatcagcagaattttctcaccattggttaatc |
18724988 |
T |
|
| Q |
122 |
tgctccatagttttttgggtcggtctgattcattacagtcatcaatgttcaatcccaagggtccagcaatatcatcttgaatctttttgatatcaggaga |
221 |
Q |
| |
|
||||||| | ||||| ||||||||||||||| | ||| || |||||||| ||||| || |||||||||||||||||||||| |||||||| | |
|
|
| T |
18724989 |
tgctccacaactttttaggtcggtctgattcactgatgtcctcccatttcaatcctaagggcccgacaatatcatcttgaatcttttttatatcaggtgt |
18725088 |
T |
|
| Q |
222 |
aaatgacactgtcgtgtcaatgatttgagtaaattgtttggattgctttagttccttacccactttgttgaccaatgtagtttttcctgtgccccccatc |
321 |
Q |
| |
|
|||||||||||| || || || | ||| | ||||| || ||| ||| |||| |||||||||| || |||||||||||||||||||||||||||| |
|
|
| T |
18725089 |
aaatgacactgtggtatcgataacatgattgaattgctttgatgtcttaagttgtttacccacttcttttgccaatgtagtttttcctgtgccccccatt |
18725188 |
T |
|
| Q |
322 |
ccttgcaacccgattatataattgttgtcatctttcagtacattcaaaagctct |
375 |
Q |
| |
|
|||||||| | ||||||||||| |||||||| | ||| ||| |||||||||| |
|
|
| T |
18725189 |
ccttgcaatctagttatataattgctgtcatctcttagtgcatccaaaagctct |
18725242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 22 - 344
Target Start/End: Complemental strand, 27368853 - 27368531
Alignment:
| Q |
22 |
cctttgtgattgtcactgtatggaatccctattacattaaaatcgatatctccccacacatcatccaatattagaagaatcttctcaccattggttaatc |
121 |
Q |
| |
|
||||||||||| || || | |||||||||||| ||| ||||| || || || |||||||||||||||||| || ||||| ||||||||||||||||||| |
|
|
| T |
27368853 |
cctttgtgattatctctatttggaatccctatgtcatcaaaattgagatttctccacacatcatccaatatcagcagaattttctcaccattggttaatc |
27368754 |
T |
|
| Q |
122 |
tgctccatagttttttgggtcggtctgattcattacagtcatcaatgttcaatcccaagggtccagcaatatcatcttgaatctttttgatatcaggaga |
221 |
Q |
| |
|
||||||| | ||||| ||||||||||||| | | ||| || |||||||| |||||||||||||||||||||||||||||||| ||| |||||| |
|
|
| T |
27368753 |
tgctccacaactttttaggtcggtctgatttagtggtgtcctcccatttcaatcctaagggtccagcaatatcatcttgaatcttttttataacaggagt |
27368654 |
T |
|
| Q |
222 |
aaatgacactgtcgtgtcaatgatttgagtaaattgtttggattgctttagttccttacccactttgttgaccaatgtagtttttcctgtgccccccatc |
321 |
Q |
| |
|
|| ||||||||| || || |||| ||| ||||| | || ||| |||| |||||||||| || |||||||||||||||||||||||||||| |
|
|
| T |
27368653 |
aactgacactgtggtatcgatgacatgatcgaattgctccaatgtcttaagttgtttacccacttcttttgccaatgtagtttttcctgtgccccccatt |
27368554 |
T |
|
| Q |
322 |
ccttgcaacccgattatataatt |
344 |
Q |
| |
|
|| ||||| ||| |||||||||| |
|
|
| T |
27368553 |
ccgtgcaatccggttatataatt |
27368531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 360
Target Start/End: Complemental strand, 27771933 - 27771592
Alignment:
| Q |
19 |
cagcctttgtgattgtcactgtatggaatccctattacattaaaatcgatatctccccacacatcatccaatattagaagaatcttctcaccattggtta |
118 |
Q |
| |
|
|||||||||||||| ||||| | |||||||||||| ||| |||||| || | | ||||||||||||| |||||||||||||| || |||||||| |||| |
|
|
| T |
27771933 |
cagcctttgtgattatcactatgtggaatccctatgccatcaaaatcaattttttcccacacatcatctaatattagaagaattttgtcaccattagtta |
27771834 |
T |
|
| Q |
119 |
atctgctccatagttttttgggtcggtctgattcattacagt-catcaatgttcaatcccaagggtccagcaatatcatcttgaatctttttgatatcag |
217 |
Q |
| |
|
|||| |||| | || | ||||||||||||||| | || | ||||| | ||||| | || ||||||||| |||||||| |||||| | |||| || |
|
|
| T |
27771833 |
atctcttccacaacattctaggtcggtctgattcactgatgtccctcaat-tccaatcttagggatccagcaatttcatcttgtatctttcttatattag |
27771735 |
T |
|
| Q |
218 |
gagaaaatgacactgtcgtgtcaatgatttgagtaaattgtttggattgctttagttccttacccactttgttgaccaatgtagtttttcctgtgccccc |
317 |
Q |
| |
|
| |||||||||||| | ||||||| || ||||| ||||| || || ||| | |||||||||| ||| | ||||||||||| || |||| || |
|
|
| T |
27771734 |
gcttaaatgacactgttgcatcaatgacaagatcgaattgattggactgtttaagtgctttacccacttctttggctaatgtagttttaccgatgcctcc |
27771635 |
T |
|
| Q |
318 |
catcccttgcaacccgattatataattgttgtcatctttcagt |
360 |
Q |
| |
|
||| |||||||||||| |||| || ||||| |||||||||||| |
|
|
| T |
27771634 |
cataccttgcaacccggttatgtagttgttttcatctttcagt |
27771592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 22 - 371
Target Start/End: Complemental strand, 27342563 - 27342214
Alignment:
| Q |
22 |
cctttgtgattgtcactgtatggaatccctattacattaaaatcgatatctccccacacatcatccaatattagaagaatcttctcaccattggttaatc |
121 |
Q |
| |
|
|||| |||||| ||||| | |||||||||||| | | ||||| || || | ||||||||||||||||||| || ||||| ||||||||||||||||||| |
|
|
| T |
27342563 |
ccttcgtgattatcactctttggaatccctatgtcctcaaaattgagattttcccacacatcatccaatatcagcagaattttctcaccattggttaatc |
27342464 |
T |
|
| Q |
122 |
tgctccatagttttttgggtcggtctgattcattacagtcatcaatgttcaatcccaagggtccagcaatatcatcttgaatctttttgatatcaggaga |
221 |
Q |
| |
|
||||||| | || || |||||| |||| | | | | || | | |||||| |||| ||||||||| |||||||||||||||| |||| ||||| |
|
|
| T |
27342463 |
tgctccacaacttgttttgtcggtttgatgaactgatgccctccaattccaatcctaaggatccagcaatgtcatcttgaatcttttctatattaggagt |
27342364 |
T |
|
| Q |
222 |
aaatgacactgtcgtgtcaatgatttgagtaaattgtttggattgctttagttccttacccactttgttgaccaatgtagtttttcctgtgccccccatc |
321 |
Q |
| |
|
|||||||||||| || | || | ||| | ||||| | ||| ||| |||| |||||||||| || |||||||||||||||||||||||||||| |
|
|
| T |
27342363 |
aaatgacactgtggttttgataacatgattgaattgctctgatgtcttaagttgtttacccacttcttttgccaatgtagtttttcctgtgccccccatt |
27342264 |
T |
|
| Q |
322 |
ccttgcaacccgattatataattgttgtcatctttcagtacattcaaaag |
371 |
Q |
| |
|
||| |||| | | ||||||||| |||||||| | ||| ||| |||||| |
|
|
| T |
27342263 |
cctcgcaatgcagtaatataattgctgtcatctcttagtgcatccaaaag |
27342214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 18082753 - 18082852
Alignment:
| Q |
24 |
tttgtgattgtcactgtatggaatccctattacattaaaatcgatatctccccacacatcatccaatattagaagaatcttctcaccattggttaatctg |
123 |
Q |
| |
|
||||||||||||||| | |||||||||||| |||| |||||| | || ||||||||||||| ||||| | |||||| |||| |||||||||||||||| |
|
|
| T |
18082753 |
tttgtgattgtcactatttggaatccctatgacatcaaaatcaagattatcccacacatcatctaatatcacaagaattttctgaccattggttaatctg |
18082852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 28128525 - 28128438
Alignment:
| Q |
13 |
attctacagcctttgtgattgtcactgtatggaatccctattacattaaaatcgatatctccccacacatcatccaatattagaagaatcttct |
106 |
Q |
| |
|
||||||||| |||||||||||||| |||||||||||| || |||||||||| | ||||||||||||||||||||||||||||||||| |
|
|
| T |
28128525 |
attctacagtctttgtgattgtca------ggaatccctattttatcaaaatcgataacatcccacacatcatccaatattagaagaatcttct |
28128438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 28142456 - 28142369
Alignment:
| Q |
13 |
attctacagcctttgtgattgtcactgtatggaatccctattacattaaaatcgatatctccccacacatcatccaatattagaagaatcttct |
106 |
Q |
| |
|
||||||||| |||||||||||||| |||||||||||| || |||||||||||| ||||||||||||| ||||||||||||||||||| |
|
|
| T |
28142456 |
attctacagtctttgtgattgtca------ggaatccctattttatcaaaatcgatatcatcccacacatcatcaaatattagaagaatcttct |
28142369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 22 - 219
Target Start/End: Original strand, 26146736 - 26146933
Alignment:
| Q |
22 |
cctttgtgattgtcactgtatggaatccctattacattaaaatcgatatctccccacacatcatccaatattagaagaatcttctcaccattggttaatc |
121 |
Q |
| |
|
||||||||||| ||||| | |||||||||||| ||| ||||| || || | |||| |||||||||||||| | |||||| || |||||||| || | || |
|
|
| T |
26146736 |
cctttgtgattatcactatttggaatccctatgtcatcaaaattgagattttcccatacatcatccaatatcacaagaattttttcaccatttgtaagtc |
26146835 |
T |
|
| Q |
122 |
tgctccatagttttttgggtcggtctgattcattacagtcatcaatgttcaatcccaagggtccagcaatatcatcttgaatctttttgatatcagga |
219 |
Q |
| |
|
| ||||| | |||| ||||| ||||||||||| ||| | | ||| || |||| ||||||||||||||||||||||||||| |||||||| |
|
|
| T |
26146836 |
tactccacaaccttttaggtcgatctgattcatttatgtctccccattccaaacctaaggatccagcaatatcatcttgaatcttttttgtatcagga |
26146933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 214
Target Start/End: Original strand, 26185217 - 26185389
Alignment:
| Q |
42 |
tggaatccctattacattaaaatcgatatctccccacacatcatccaatattagaagaatcttctcaccattggttaatctgctccatagttttttgggt |
141 |
Q |
| |
|
||||| |||||| ||| ||||| ||||| | ||| |||||||||||||| | |||||| || |||||||||||||||||| |||| | |||| ||| |
|
|
| T |
26185217 |
tggaagccctatctcatcaaaattgatatttttccagacatcatccaatatcacaagaattttatcaccattggttaatctgttccacaaacttttaggt |
26185316 |
T |
|
| Q |
142 |
cggtctgattcattacagtcatcaatgttcaatcccaagggtccagcaatatcatcttgaatctttttgatat |
214 |
Q |
| |
|
|| ||||||||||| || || | | || ||| |||| ||| ||||||||||||||||||||||| |||| |
|
|
| T |
26185317 |
cgatctgattcatttttgttttccaaatccagtcctaaggatccggcaatatcatcttgaatcttttttatat |
26185389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 236
Target Start/End: Original strand, 26118738 - 26118952
Alignment:
| Q |
22 |
cctttgtgattgtcactgtatggaatccctattacattaaaatcgatatctccccacacatcatccaatattagaagaatcttctcaccattggttaatc |
121 |
Q |
| |
|
||||| ||||| ||||| | ||||| |||||| ||| ||||| || || | |||||||||||||||| || | |||||| || ||||||| ||||||| |
|
|
| T |
26118738 |
cctttatgattatcactatttggaagccctatgtcatcaaaattgagattttcccacacatcatccaagatcacaagaattttatcaccatctgttaatc |
26118837 |
T |
|
| Q |
122 |
tgctccatagttttttgggtcggtctgattcattacagtcatcaatgttcaatcccaagggtccagcaatatcatcttgaatctttttgatatcaggaga |
221 |
Q |
| |
|
||||||| | |||| ||||| || |||||||| ||| | | |||||| |||| ||| |||||||||| |||||||||||| || ||| || |
|
|
| T |
26118838 |
tgctccacaaccttttaggtcgatccgattcatttatgtctccccattccaatcctaaggatccggcaatatcattttgaatcttttttatctcaagatt |
26118937 |
T |
|
| Q |
222 |
aaatgacactgtcgt |
236 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
26118938 |
aaatgacactgtcgt |
26118952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 407
Target Start/End: Original strand, 26119009 - 26119123
Alignment:
| Q |
293 |
ccaatgtagtttttcctgtgccccccatcccttgcaacccgattatataattgttgtcatctttcagtacattcaaaagctctatgtatttggattctct |
392 |
Q |
| |
|
|||||||||||||||| | ||||||||||| ||||| || | ||||| || |||||||||| | | ||| ||||||||||| |||||| | ||||| |
|
|
| T |
26119009 |
ccaatgtagtttttccagcaccccccatcccatgcaatccaaccatatagttactgtcatcttttattgcatccaaaagctctacgtatttcaactctct |
26119108 |
T |
|
| Q |
393 |
acttttaaatgaaat |
407 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
26119109 |
gcttttaaatgaaat |
26119123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 292 - 401
Target Start/End: Original strand, 18083021 - 18083130
Alignment:
| Q |
292 |
accaatgtagtttttcctgtgccccccatcccttgcaacccgattatataattgttgtcatctttcagtacattcaaaagctctatgtatttggattctc |
391 |
Q |
| |
|
|||||||||||||| ||| ||||| |||| |||||||| | |||||||| || || |||||||| | | ||| |||||||||| ||||||| | |||| |
|
|
| T |
18083021 |
accaatgtagttttacctatgcccgccattccttgcaatacaattatatagttattctcatcttttattgcatccaaaagctctttgtatttcaactctc |
18083120 |
T |
|
| Q |
392 |
tacttttaaa |
401 |
Q |
| |
|
| |||||||| |
|
|
| T |
18083121 |
tgcttttaaa |
18083130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 18082914 - 18082959
Alignment:
| Q |
185 |
cagcaatatcatcttgaatctttttgatatcaggagaaaatgacac |
230 |
Q |
| |
|
||||||||| | |||||||||||| |||||||||||||||||||| |
|
|
| T |
18082914 |
cagcaatataacattgaatcttttttatatcaggagaaaatgacac |
18082959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 236
Target Start/End: Original strand, 26241151 - 26241216
Alignment:
| Q |
171 |
caatcccaagggtccagcaatatcatcttgaatctttttgatatcaggagaaaatgacactgtcgt |
236 |
Q |
| |
|
|||||| |||| ||| |||||||||| |||||||||||| || ||| || ||||||||||||||| |
|
|
| T |
26241151 |
caatcctaaggatccggcaatatcattttgaatcttttttatctcaagattaaatgacactgtcgt |
26241216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 26213861 - 26213937
Alignment:
| Q |
79 |
acatcatccaatattagaagaatcttctcaccattggttaatctgctccatagttttttgggtcggtctgattcatt |
155 |
Q |
| |
|
|||||||||||||| | |||||| || ||||||||||||||||| |||| | |||| ||||| ||||||||||| |
|
|
| T |
26213861 |
acatcatccaatatcacaagaattttatcaccattggttaatcttttccacaaacttttaggtcgatctgattcatt |
26213937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 26241059 - 26241135
Alignment:
| Q |
79 |
acatcatccaatattagaagaatcttctcaccattggttaatctgctccatagttttttgggtcggtctgattcatt |
155 |
Q |
| |
|
||||||||||| || | |||||| || ||||||| |||||||||||||| | ||||| ||||| ||||||||||| |
|
|
| T |
26241059 |
acatcatccaagatcacaagaattttatcaccatctgttaatctgctccacaactttttaggtcgatctgattcatt |
26241135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 28045985 - 28045921
Alignment:
| Q |
43 |
ggaatccctattacattaaaatcgatatctccccacacatcatccaatattagaagaatcttctc |
107 |
Q |
| |
|
|||||||||||| || ||||| |||| | ||||||||||||||||||| |||||||| ||||| |
|
|
| T |
28045985 |
ggaatccctattttatcaaaattgataacatcccacacatcatccaatatcagaagaattttctc |
28045921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 282; Significance: 1e-158; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 16 - 389
Target Start/End: Original strand, 8696228 - 8696601
Alignment:
| Q |
16 |
ctacagcctttgtgattgtcactgtatggaatccctattacattaaaatcgatatctccccacacatcatccaatattagaagaatcttctcaccattgg |
115 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8696228 |
ctacagcctttgtgattgtcaccgtatggaatcccaatttcattaaaatcgatgtctccccacacatcatccaatattagaagaatcttctcaccattgg |
8696327 |
T |
|
| Q |
116 |
ttaatctgctccatagttttttgggtcggtctgattcattacagtcatcaatgttcaatcccaagggtccagcaatatcatcttgaatctttttgatatc |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
8696328 |
ttaatctgctccatagttttttgggtcggtctgaatcattacagtcatcaaatttcaatcgcaaggatcctgcaatatcatcttgaatctttttgatatc |
8696427 |
T |
|
| Q |
216 |
aggagaaaatgacactgtcgtgtcaatgatttgagtaaattgtttggattgctttagttccttacccactttgttgaccaatgtagtttttcctgtgccc |
315 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||| |||| ||| ||||||||||||||||||||||| |
|
|
| T |
8696428 |
aggagaaaatgacactgttgtgtcaatgatttgagtaaactgtttggattgcttaagttccttaccaacttctttggccaatgtagtttttcctgtgccc |
8696527 |
T |
|
| Q |
316 |
cccatcccttgcaacccgattatataattgttgtcatctttcagtacattcaaaagctctatgtatttggattc |
389 |
Q |
| |
|
|||||||||| ||||||||||| |||||||||||||||||||| | ||| |||||||||| ||||||||||||| |
|
|
| T |
8696528 |
cccatccctttcaacccgattacataattgttgtcatctttcaatgcatccaaaagctctttgtatttggattc |
8696601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0067 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: scaffold0067
Description:
Target: scaffold0067; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 13 - 383
Target Start/End: Complemental strand, 22537 - 22167
Alignment:
| Q |
13 |
attctacagcctttgtgattgtcactgtatggaatccctattacattaaaatcgatatctccccacacatcatccaatattagaagaatcttctcaccat |
112 |
Q |
| |
|
||||||||||||||||| |||||||| ||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22537 |
attctacagcctttgtggttgtcactatatggaatccctatttcatcaaaatcgatatcttcccacacatcatccaatattagaagaatcttctcaccat |
22438 |
T |
|
| Q |
113 |
tggttaatctgctccatagttttttgggtcggtctgattcattacagtcatcaatgttcaatcccaagggtccagcaatatcatcttgaatctttttgat |
212 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
22437 |
tggttaatctgctccatagtattttgtgtcggtctgattcattacagtcatcaaatttcaatcccaagggtcgagcaatatcatcttgaatctttttgat |
22338 |
T |
|
| Q |
213 |
atcaggagaaaatgacactgtcgtgtcaatgatttgagtaaattgtttggattgctttagttccttacccactttgttgaccaatgtagtttttcctgtg |
312 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| | ||| ||||| |||||||||||||||||||||||| |
|
|
| T |
22337 |
atcaggagaaaatgacactgtcgtgtggatgatttgagtaaattgtttggactgctttagtttcatacacacttccttgaccaatgtagtttttcctgtg |
22238 |
T |
|
| Q |
313 |
ccccccatcccttgcaacccgattatataattgttgtcatctttcagtacattcaaaagctctatgtattt |
383 |
Q |
| |
|
|||||||||||||||| |||| ||||| |||||||||||||||||| ||| ||||||||| ||||||| |
|
|
| T |
22237 |
ccccccatcccttgcatcccggttataaaattgttgtcatctttcaaagcatctaaaagctctttgtattt |
22167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 192; Significance: 1e-104; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 13 - 416
Target Start/End: Original strand, 9331803 - 9332205
Alignment:
| Q |
13 |
attctacagcctttgtgattgtcactgtatggaatccctattacattaaaatcgatatctccccacacatcatccaatattagaagaatcttctcaccat |
112 |
Q |
| |
|
|||||||| |||||||||||| ||| | ||||||||||||| || ||||| ||||||||||||||||||||| | ||||||||||||||||||||||| |
|
|
| T |
9331803 |
attctacaacctttgtgattgcgactttgtggaatccctatttcaacaaaattgatatctccccacacatcatcaagtattagaagaatcttctcaccat |
9331902 |
T |
|
| Q |
113 |
tggttaatctgctccatagttttttgggtcggtctgattcattacagtcatcaatgttcaatcccaagggtccagcaatatcatcttgaatctttttgat |
212 |
Q |
| |
|
|||||||||| ||||||||||| |||||||||||| ||||| |||||||||||| ||||||||||| |||||| ||||||||||||||||||| | || |
|
|
| T |
9331903 |
tggttaatctactccatagtttcttgggtcggtcttattcactacagtcatcaaatttcaatcccaacggtccaagaatatcatcttgaatctttctaat |
9332002 |
T |
|
| Q |
213 |
atcaggagaaaatgacactgtcgtgtcaatgatttgagtaaattgtttggattgctttagttccttacccactttgttgaccaatgtagtttttcctgtg |
312 |
Q |
| |
|
|||| ||| |||||||||||||| || |||| | |||||||| |||||||||||| ||||||||||| | || ||| |||||||| |||||||||| |
|
|
| T |
9332003 |
atcaaaagataatgacactgtcgtatc-atgacgtaagtaaattttttggattgcttaagttccttaccaatttctttggtcaatgtaggttttcctgtg |
9332101 |
T |
|
| Q |
313 |
ccccccatcccttgcaacccgattatataattgttgtcatctttcagtacattcaaaagctctatgtatttggattctctacttttaaatgaaatatagt |
412 |
Q |
| |
|
||| ||||||||| ||||||||||| | |||||||||| ||||||| | ||| |||||||||| ||||||||||||| ||||||||||| | |||||| | |
|
|
| T |
9332102 |
cccgccatccctttcaacccgattacaaaattgttgtcgtctttcaatgcatccaaaagctctttgtatttggattccctacttttaaaaggaatataat |
9332201 |
T |
|
| Q |
413 |
gttg |
416 |
Q |
| |
|
|||| |
|
|
| T |
9332202 |
gttg |
9332205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 13 - 416
Target Start/End: Original strand, 9385586 - 9385988
Alignment:
| Q |
13 |
attctacagcctttgtgattgtcactgtatggaatccctattacattaaaatcgatatctccccacacatcatccaatattagaagaatcttctcaccat |
112 |
Q |
| |
|
|||||||| |||||||||||| ||| | ||||||||||||| || ||||| ||||||||||||||||||||| | ||||||||||||||||||||||| |
|
|
| T |
9385586 |
attctacaacctttgtgattgcgactttgtggaatccctatttcaacaaaattgatatctccccacacatcatcaagtattagaagaatcttctcaccat |
9385685 |
T |
|
| Q |
113 |
tggttaatctgctccatagttttttgggtcggtctgattcattacagtcatcaatgttcaatcccaagggtccagcaatatcatcttgaatctttttgat |
212 |
Q |
| |
|
|||||||||| ||||||||||| |||||||||||| ||||| |||||||||||| ||||||||||| |||||| ||||||||||||||||||| | || |
|
|
| T |
9385686 |
tggttaatctactccatagtttcttgggtcggtcttattcactacagtcatcaaatttcaatcccaacggtccaagaatatcatcttgaatctttctaat |
9385785 |
T |
|
| Q |
213 |
atcaggagaaaatgacactgtcgtgtcaatgatttgagtaaattgtttggattgctttagttccttacccactttgttgaccaatgtagtttttcctgtg |
312 |
Q |
| |
|
|||| ||| |||||||||||||| || |||| | |||||||| |||||||||||| ||||||||||| | || ||| |||||||| |||||||||| |
|
|
| T |
9385786 |
atcaaaagataatgacactgtcgtatc-atgacgtaagtaaattttttggattgcttaagttccttaccaatttctttggtcaatgtaggttttcctgtg |
9385884 |
T |
|
| Q |
313 |
ccccccatcccttgcaacccgattatataattgttgtcatctttcagtacattcaaaagctctatgtatttggattctctacttttaaatgaaatatagt |
412 |
Q |
| |
|
||| ||||||||| ||||||||||| | |||||||||| ||||||| | ||| |||||||||| ||||||||||||| ||||||||||| | |||||| | |
|
|
| T |
9385885 |
cccgccatccctttcaacccgattacaaaattgttgtcgtctttcaatgcatccaaaagctctttgtatttggattccctacttttaaaaggaatataat |
9385984 |
T |
|
| Q |
413 |
gttg |
416 |
Q |
| |
|
|||| |
|
|
| T |
9385985 |
gttg |
9385988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0912 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: scaffold0912
Description:
Target: scaffold0912; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 22 - 383
Target Start/End: Original strand, 617 - 978
Alignment:
| Q |
22 |
cctttgtgattgtcactgtatggaatccctattacattaaaatcgatatctccccacacatcatccaatattagaagaatcttctcaccattggttaatc |
121 |
Q |
| |
|
||||||||||| ||||| | |||||||||||| ||| ||||| || || ||||||||||||||||||||| || ||||| ||||||||||||||||||| |
|
|
| T |
617 |
cctttgtgattatcactctttggaatccctatgtcatcaaaattgagatttccccacacatcatccaatatcagcagaattttctcaccattggttaatc |
716 |
T |
|
| Q |
122 |
tgctccatagttttttgggtcggtctgattcattacagtcatcaatgttcaatcccaagggtccagcaatatcatcttgaatctttttgatatcaggaga |
221 |
Q |
| |
|
||||||| | ||||| |||||| |||||||| || ||| || |||||||| ||||| |||||||||||||||||||||||||| |||||||||| |
|
|
| T |
717 |
tgctccacaactttttaggtcggcctgattcactaatgtcctcccatttcaatcctaagggcccagcaatatcatcttgaatcttttttatatcaggagt |
816 |
T |
|
| Q |
222 |
aaatgacactgtcgtgtcaatgatttgagtaaattgtttggattgctttagttccttacccactttgttgaccaatgtagtttttcctgtgccccccatc |
321 |
Q |
| |
|
|||||||||||| || || |||| ||| ||||| | || ||| |||| |||||||||| || |||||||||||||||||||||||||||| |
|
|
| T |
817 |
aaatgacactgtggtatcgatgacatgatcgaattgctccaatgtcttaagttgtttacccacttcttttgccaatgtagtttttcctgtgccccccatt |
916 |
T |
|
| Q |
322 |
ccttgcaacccgattatataattgttgtcatctttcagtacattcaaaagctctatgtattt |
383 |
Q |
| |
|
|||||||| || || |||||||||||||||| | ||| ||| ||||||||| ||||||| |
|
|
| T |
917 |
ccttgcaatccagataaataattgttgtcatctcttagtgcatctaaaagctctttgtattt |
978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0043 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold0043
Description:
Target: scaffold0043; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 22 - 375
Target Start/End: Original strand, 74698 - 75051
Alignment:
| Q |
22 |
cctttgtgattgtcactgtatggaatccctattacattaaaatcgatatctccccacacatcatccaatattagaagaatcttctcaccattggttaatc |
121 |
Q |
| |
|
||||||||||| ||||| | |||||||||||| ||| ||||| || || ||||||||||||||||||||| || ||||| ||||||||||||||||||| |
|
|
| T |
74698 |
cctttgtgattatcactctttggaatccctatgtcatcaaaattgagatttccccacacatcatccaatatcagcagaattttctcaccattggttaatc |
74797 |
T |
|
| Q |
122 |
tgctccatagttttttgggtcggtctgattcattacagtcatcaatgttcaatcccaagggtccagcaatatcatcttgaatctttttgatatcaggaga |
221 |
Q |
| |
|
||||||| | || ||| | ||||||||||||| | | | | || | |||||| |||||||||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
74798 |
tgctccacaattctttagatcggtctgattcactgatgcccttaaattccaatcctaagggtccagcaatgtcatcttgaatcttttttatatcaggagt |
74897 |
T |
|
| Q |
222 |
aaatgacactgtcgtgtcaatgatttgagtaaattgtttggattgctttagttccttacccactttgttgaccaatgtagtttttcctgtgccccccatc |
321 |
Q |
| |
|
|||||||||| | || || || | || | ||||| | | | ||| |||| |||||||||| || |||||||||||||||||||||||||||| |
|
|
| T |
74898 |
aaatgacactttggtatcgataacatgcttgaattgctctggtgtcttaagttgtttacccacttcttttgccaatgtagtttttcctgtgccccccatt |
74997 |
T |
|
| Q |
322 |
ccttgcaacccgattatataattgttgtcatctttcagtacattcaaaagctct |
375 |
Q |
| |
|
|||||||| || | |||||||||||||||||| | ||| ||| |||||||||| |
|
|
| T |
74998 |
ccttgcaatccagtaatataattgttgtcatctcttagtgcatccaaaagctct |
75051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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