View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17374_high_4 (Length: 347)

Name: NF17374_high_4
Description: NF17374
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17374_high_4
NF17374_high_4
[»] chr4 (42 HSPs)
chr4 (33-290)||(51808879-51809136)
chr4 (244-333)||(6987704-6987793)
chr4 (235-331)||(2996582-2996678)
chr4 (245-315)||(20936210-20936280)
chr4 (235-333)||(44319958-44320056)
chr4 (235-334)||(11264310-11264409)
chr4 (251-333)||(54426068-54426151)
chr4 (235-313)||(1965950-1966028)
chr4 (235-333)||(23819098-23819196)
chr4 (235-329)||(50742803-50742897)
chr4 (240-333)||(1137726-1137819)
chr4 (241-333)||(27123315-27123407)
chr4 (240-283)||(19429723-19429766)
chr4 (251-333)||(25904185-25904268)
chr4 (235-314)||(46110212-46110291)
chr4 (267-333)||(47118928-47118994)
chr4 (246-327)||(55064855-55064937)
chr4 (235-314)||(49803217-49803297)
chr4 (235-330)||(29263379-29263475)
chr4 (241-333)||(50799993-50800084)
chr4 (265-333)||(56249563-56249631)
chr4 (240-307)||(6466035-6466102)
chr4 (240-283)||(14011248-14011291)
chr4 (240-327)||(22236074-22236161)
chr4 (254-321)||(22662222-22662289)
chr4 (235-333)||(4798529-4798627)
chr4 (242-280)||(5131266-5131304)
chr4 (235-321)||(11158333-11158418)
chr4 (235-281)||(18967445-18967491)
chr4 (240-278)||(19422412-19422450)
chr4 (235-333)||(21043198-21043296)
chr4 (240-322)||(27405823-27405905)
chr4 (235-333)||(28300262-28300360)
chr4 (240-317)||(2874603-2874680)
chr4 (235-296)||(7694010-7694071)
chr4 (235-327)||(29912957-29913049)
chr4 (240-333)||(30066729-30066822)
chr4 (292-333)||(45622307-45622348)
chr4 (265-312)||(7839344-7839392)
chr4 (242-333)||(24169279-24169371)
chr4 (235-303)||(28615532-28615600)
chr4 (266-333)||(49939913-49939981)
[»] chr8 (48 HSPs)
chr8 (241-330)||(7918412-7918501)
chr8 (234-333)||(14949874-14949973)
chr8 (235-333)||(39551172-39551270)
chr8 (235-332)||(42215270-42215367)
chr8 (234-333)||(30918121-30918219)
chr8 (240-331)||(31716191-31716283)
chr8 (240-319)||(2458543-2458622)
chr8 (240-331)||(43569174-43569265)
chr8 (254-316)||(10383913-10383975)
chr8 (265-330)||(32840951-32841017)
chr8 (235-333)||(43504760-43504858)
chr8 (244-333)||(2482881-2482970)
chr8 (240-317)||(3254239-3254316)
chr8 (235-296)||(20672759-20672820)
chr8 (240-331)||(34849117-34849209)
chr8 (265-313)||(43368683-43368731)
chr8 (254-333)||(8629484-8629563)
chr8 (251-333)||(35643950-35644033)
chr8 (235-321)||(11813080-11813166)
chr8 (235-329)||(12851185-12851279)
chr8 (235-332)||(27028840-27028938)
chr8 (235-329)||(30191108-30191202)
chr8 (242-283)||(5088868-5088909)
chr8 (254-319)||(13459673-13459738)
chr8 (265-333)||(26771304-26771373)
chr8 (242-318)||(11183561-11183637)
chr8 (235-278)||(1433557-1433600)
chr8 (298-333)||(2487971-2488006)
chr8 (235-278)||(6509321-6509364)
chr8 (239-278)||(7514826-7514865)
chr8 (264-333)||(28763405-28763476)
chr8 (235-334)||(41442415-41442514)
chr8 (252-322)||(7646232-7646302)
chr8 (251-328)||(10120781-10120859)
chr8 (265-322)||(27492976-27493034)
chr8 (235-289)||(33714243-33714297)
chr8 (253-318)||(27645931-27645996)
chr8 (235-331)||(28784758-28784856)
chr8 (265-333)||(36963316-36963385)
chr8 (235-280)||(38036128-38036173)
chr8 (265-317)||(779040-779092)
chr8 (235-322)||(1930044-1930132)
chr8 (235-319)||(4390222-4390306)
chr8 (235-283)||(13652224-13652272)
chr8 (235-283)||(13710867-13710915)
chr8 (265-312)||(15247760-15247808)
chr8 (248-331)||(26410301-26410385)
chr8 (235-279)||(39881769-39881813)
[»] chr5 (46 HSPs)
chr5 (235-333)||(37611178-37611276)
chr5 (235-333)||(37787908-37788006)
chr5 (240-327)||(4619721-4619808)
chr5 (235-318)||(17368685-17368768)
chr5 (235-322)||(17258857-17258944)
chr5 (250-333)||(37526162-37526245)
chr5 (235-333)||(7674657-7674755)
chr5 (242-336)||(12459961-12460055)
chr5 (235-333)||(37588323-37588421)
chr5 (251-333)||(37690599-37690681)
chr5 (235-281)||(40205089-40205135)
chr5 (234-332)||(2468439-2468538)
chr5 (270-333)||(39248143-39248206)
chr5 (240-282)||(3951830-3951872)
chr5 (241-331)||(14295521-14295611)
chr5 (243-333)||(28586729-28586819)
chr5 (242-296)||(33533539-33533593)
chr5 (235-331)||(7907890-7907987)
chr5 (273-333)||(16457941-16458002)
chr5 (252-336)||(499691-499775)
chr5 (235-283)||(11684423-11684471)
chr5 (240-319)||(12857314-12857394)
chr5 (235-322)||(39105473-39105561)
chr5 (235-330)||(2568667-2568762)
chr5 (235-333)||(7984978-7985077)
chr5 (251-318)||(10125696-10125763)
chr5 (246-333)||(11457119-11457205)
chr5 (235-318)||(12242688-12242771)
chr5 (235-333)||(6593308-6593406)
chr5 (241-283)||(26390803-26390845)
chr5 (240-333)||(29925855-29925949)
chr5 (235-277)||(36774726-36774768)
chr5 (259-313)||(37794681-37794735)
chr5 (240-333)||(42500205-42500297)
chr5 (288-333)||(3520640-3520685)
chr5 (235-280)||(18543213-18543257)
chr5 (235-280)||(18875370-18875415)
chr5 (241-302)||(32194073-32194134)
chr5 (235-322)||(1191685-1191773)
chr5 (254-318)||(8089964-8090028)
chr5 (233-311)||(11615639-11615714)
chr5 (240-319)||(12857681-12857761)
chr5 (240-312)||(36542266-36542338)
chr5 (235-330)||(37954695-37954791)
chr5 (251-283)||(38028574-38028606)
chr5 (290-322)||(41535446-41535478)
[»] chr3 (52 HSPs)
chr3 (235-332)||(37273143-37273240)
chr3 (235-331)||(21574499-21574595)
chr3 (235-333)||(14548684-14548782)
chr3 (235-319)||(1816592-1816676)
chr3 (240-312)||(2152162-2152234)
chr3 (235-333)||(21367676-21367775)
chr3 (235-319)||(41644422-41644506)
chr3 (235-322)||(36646356-36646443)
chr3 (244-306)||(3044249-3044311)
chr3 (243-333)||(47513670-47513760)
chr3 (240-337)||(50952347-50952444)
chr3 (235-283)||(44284093-44284141)
chr3 (235-319)||(49465642-49465726)
chr3 (251-322)||(29427619-29427690)
chr3 (235-318)||(30573892-30573975)
chr3 (235-330)||(54837000-54837095)
chr3 (265-315)||(5391918-5391968)
chr3 (248-302)||(25925764-25925818)
chr3 (267-333)||(34707459-34707525)
chr3 (265-335)||(53762355-53762425)
chr3 (235-288)||(24887291-24887344)
chr3 (265-333)||(31365150-31365219)
chr3 (235-296)||(40665438-40665499)
chr3 (240-312)||(2175833-2175905)
chr3 (235-303)||(33725867-33725935)
chr3 (285-333)||(43046725-43046773)
chr3 (265-332)||(45264329-45264397)
chr3 (235-274)||(24158525-24158564)
chr3 (243-318)||(24281064-24281139)
chr3 (235-318)||(36887513-36887596)
chr3 (235-333)||(39980738-39980837)
chr3 (235-283)||(52323907-52323957)
chr3 (240-330)||(11253515-11253605)
chr3 (235-313)||(22214642-22214720)
chr3 (240-310)||(23793598-23793667)
chr3 (240-334)||(23808026-23808120)
chr3 (240-306)||(36200110-36200176)
chr3 (235-333)||(43948664-43948761)
chr3 (235-317)||(45541580-45541662)
chr3 (288-322)||(46778164-46778198)
chr3 (235-296)||(20669181-20669242)
chr3 (235-332)||(40880912-40881009)
chr3 (243-315)||(41724228-41724301)
chr3 (235-320)||(48286786-48286871)
chr3 (256-313)||(50004682-50004739)
chr3 (235-322)||(901933-902021)
chr3 (253-313)||(3015826-3015886)
chr3 (291-339)||(25182944-25182992)
chr3 (235-283)||(30923911-30923959)
chr3 (240-331)||(46031004-46031096)
chr3 (258-318)||(47132026-47132086)
chr3 (235-279)||(48528565-48528609)
[»] chr1 (60 HSPs)
chr1 (240-316)||(35925704-35925780)
chr1 (235-314)||(4699597-4699676)
chr1 (251-333)||(31517703-31517785)
chr1 (235-333)||(37811861-37811959)
chr1 (234-319)||(7262495-7262580)
chr1 (235-333)||(33723345-33723443)
chr1 (240-333)||(32515404-32515497)
chr1 (265-333)||(2295135-2295204)
chr1 (235-296)||(30257692-30257753)
chr1 (240-329)||(37593651-37593740)
chr1 (273-333)||(38170653-38170713)
chr1 (251-334)||(51929500-51929584)
chr1 (235-322)||(3052680-3052767)
chr1 (235-333)||(3233977-3234076)
chr1 (235-322)||(10744310-10744397)
chr1 (235-318)||(24460385-24460468)
chr1 (235-333)||(24915013-24915112)
chr1 (235-333)||(49938756-49938855)
chr1 (251-333)||(2777917-2777999)
chr1 (251-333)||(4445733-4445815)
chr1 (251-313)||(6262045-6262107)
chr1 (235-313)||(17269259-17269337)
chr1 (235-333)||(23373276-23373373)
chr1 (235-313)||(25479590-25479668)
chr1 (235-317)||(37842334-37842416)
chr1 (245-319)||(38247030-38247104)
chr1 (246-318)||(15942725-15942798)
chr1 (235-320)||(39270401-39270486)
chr1 (235-331)||(7218039-7218135)
chr1 (245-333)||(10439705-10439793)
chr1 (235-315)||(31118052-31118132)
chr1 (273-333)||(38001643-38001703)
chr1 (235-331)||(44422708-44422804)
chr1 (252-322)||(3887605-3887676)
chr1 (235-278)||(5150946-5150989)
chr1 (235-322)||(10199382-10199469)
chr1 (235-278)||(35017585-35017628)
chr1 (298-333)||(50644217-50644252)
chr1 (265-327)||(4481969-4482031)
chr1 (285-327)||(5741666-5741708)
chr1 (268-333)||(27146217-27146283)
chr1 (242-280)||(30259502-30259540)
chr1 (241-322)||(37473418-37473500)
chr1 (254-312)||(38266444-38266502)
chr1 (240-294)||(40943229-40943283)
chr1 (235-333)||(43420267-43420365)
chr1 (265-333)||(11941301-11941370)
chr1 (265-333)||(12287154-12287223)
chr1 (268-333)||(14332024-14332089)
chr1 (252-317)||(33108601-33108666)
chr1 (240-289)||(35590899-35590948)
chr1 (240-277)||(39596611-39596648)
chr1 (235-315)||(3924633-3924713)
chr1 (251-307)||(6292518-6292574)
chr1 (235-319)||(17778966-17779050)
chr1 (246-306)||(26184768-26184828)
chr1 (235-271)||(38651456-38651492)
chr1 (273-333)||(42757140-42757200)
chr1 (234-322)||(45394123-45394211)
chr1 (240-304)||(46252674-46252738)
[»] chr2 (54 HSPs)
chr2 (235-322)||(28933833-28933919)
chr2 (251-329)||(28677626-28677704)
chr2 (241-322)||(15120198-15120279)
chr2 (235-306)||(34652026-34652097)
chr2 (235-305)||(1939323-1939393)
chr2 (265-334)||(16451157-16451227)
chr2 (240-317)||(33192216-33192293)
chr2 (235-339)||(35485926-35486030)
chr2 (235-339)||(40158727-40158831)
chr2 (235-333)||(41293125-41293224)
chr2 (240-333)||(4606939-4607033)
chr2 (248-322)||(38809348-38809422)
chr2 (240-317)||(1647250-1647327)
chr2 (240-333)||(12313136-12313229)
chr2 (235-331)||(40279416-40279512)
chr2 (264-333)||(43530074-43530143)
chr2 (235-315)||(33941918-33941998)
chr2 (235-319)||(41817177-41817261)
chr2 (235-323)||(43065423-43065511)
chr2 (235-322)||(45229520-45229608)
chr2 (265-331)||(2142693-2142760)
chr2 (246-333)||(5902512-5902599)
chr2 (235-306)||(32821818-32821889)
chr2 (242-296)||(16867755-16867809)
chr2 (240-313)||(10285874-10285947)
chr2 (264-332)||(41812055-41812124)
chr2 (235-331)||(1741997-1742093)
chr2 (254-330)||(8820258-8820334)
chr2 (235-319)||(35378993-35379077)
chr2 (241-333)||(38077036-38077128)
chr2 (235-322)||(9556248-9556335)
chr2 (240-331)||(32106764-32106855)
chr2 (246-333)||(41041985-41042072)
chr2 (240-331)||(44438804-44438895)
chr2 (267-333)||(787373-787439)
chr2 (235-333)||(8187416-8187514)
chr2 (288-334)||(11863964-11864010)
chr2 (240-322)||(29430772-29430854)
chr2 (240-329)||(36114433-36114523)
chr2 (235-330)||(40837399-40837496)
chr2 (269-318)||(42420200-42420250)
chr2 (235-281)||(43205318-43205364)
chr2 (235-333)||(43279489-43279590)
chr2 (260-333)||(14316108-14316181)
chr2 (265-333)||(15757620-15757689)
chr2 (258-339)||(18884899-18884980)
chr2 (280-333)||(32837377-32837430)
chr2 (251-280)||(37034047-37034076)
chr2 (240-312)||(18179224-18179296)
chr2 (239-283)||(25790139-25790183)
chr2 (265-328)||(25800875-25800938)
chr2 (273-333)||(29429720-29429780)
chr2 (247-327)||(43529827-43529907)
chr2 (240-319)||(43570428-43570507)
[»] chr6 (44 HSPs)
chr6 (235-319)||(30523668-30523752)
chr6 (243-322)||(7945858-7945937)
chr6 (235-322)||(20368154-20368241)
chr6 (235-317)||(31624099-31624181)
chr6 (240-318)||(32577964-32578042)
chr6 (268-333)||(769180-769245)
chr6 (235-327)||(2263201-2263293)
chr6 (241-306)||(4420658-4420723)
chr6 (265-317)||(1575934-1575986)
chr6 (241-333)||(2460114-2460206)
chr6 (241-333)||(32171482-32171574)
chr6 (235-302)||(25100052-25100119)
chr6 (235-318)||(31686341-31686424)
chr6 (254-329)||(34403883-34403958)
chr6 (235-313)||(2455819-2455897)
chr6 (252-306)||(9667975-9668029)
chr6 (240-333)||(281811-281904)
chr6 (235-319)||(8010366-8010450)
chr6 (293-329)||(10645351-10645387)
chr6 (254-322)||(30863274-30863342)
chr6 (235-306)||(4246419-4246490)
chr6 (235-306)||(7148675-7148746)
chr6 (242-313)||(7931709-7931780)
chr6 (235-322)||(8035122-8035209)
chr6 (235-322)||(10616515-10616602)
chr6 (259-322)||(10616687-10616750)
chr6 (240-319)||(12628356-12628434)
chr6 (240-315)||(30523951-30524026)
chr6 (235-318)||(33887839-33887922)
chr6 (262-312)||(4080952-4081002)
chr6 (234-331)||(29754063-29754161)
chr6 (235-333)||(32975987-32976085)
chr6 (251-321)||(34404114-34404184)
chr6 (298-331)||(836502-836535)
chr6 (245-322)||(1669772-1669849)
chr6 (235-312)||(2034430-2034507)
chr6 (241-282)||(3168275-3168316)
chr6 (235-296)||(6647396-6647457)
chr6 (290-331)||(9559503-9559544)
chr6 (276-333)||(26559202-26559259)
chr6 (240-309)||(33080565-33080634)
chr6 (240-333)||(34939758-34939851)
chr6 (240-312)||(2027390-2027462)
chr6 (246-330)||(32171349-32171433)
[»] chr7 (38 HSPs)
chr7 (235-333)||(21568457-21568556)
chr7 (251-333)||(22387859-22387941)
chr7 (235-333)||(19022547-19022646)
chr7 (235-312)||(9423578-9423655)
chr7 (240-289)||(28165105-28165154)
chr7 (265-333)||(34035956-34036025)
chr7 (227-327)||(5276232-5276332)
chr7 (265-317)||(15740390-15740442)
chr7 (235-322)||(33678789-33678877)
chr7 (241-333)||(33894642-33894734)
chr7 (235-322)||(3968732-3968818)
chr7 (242-333)||(48157083-48157174)
chr7 (243-333)||(12234852-12234942)
chr7 (241-333)||(420375-420468)
chr7 (240-333)||(3836646-3836738)
chr7 (251-322)||(11619131-11619203)
chr7 (258-318)||(19719038-19719098)
chr7 (245-333)||(45859490-45859577)
chr7 (235-302)||(529384-529451)
chr7 (298-333)||(4970754-4970789)
chr7 (266-317)||(11048067-11048118)
chr7 (246-333)||(25670549-25670636)
chr7 (235-314)||(28702759-28702837)
chr7 (290-333)||(44989639-44989682)
chr7 (240-331)||(48131567-48131658)
chr7 (253-315)||(941567-941629)
chr7 (235-297)||(24363600-24363662)
chr7 (234-280)||(25596041-25596087)
chr7 (255-329)||(28520979-28521053)
chr7 (251-333)||(36598319-36598401)
chr7 (242-312)||(39360039-39360109)
chr7 (265-318)||(39967959-39968013)
chr7 (244-318)||(46082054-46082128)
chr7 (273-330)||(30535610-30535667)
chr7 (267-331)||(23214896-23214960)
chr7 (249-293)||(35056831-35056875)
chr7 (235-319)||(44615081-44615165)
chr7 (235-319)||(45078287-45078371)
[»] scaffold0608 (1 HSPs)
scaffold0608 (265-327)||(9606-9668)
[»] scaffold0136 (1 HSPs)
scaffold0136 (235-279)||(32756-32800)


Alignment Details
Target: chr4 (Bit Score: 258; Significance: 1e-143; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 33 - 290
Target Start/End: Complemental strand, 51809136 - 51808879
Alignment:
Q  33 gtgaaattgaagtgttagaagatcaagatctatcaaatttctgcattttagttataatataatcaaaactatatgttgtcatgtttggacatgcagttta 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51809136 gtgaaattgaagtgttagaagatcaagatctatcaaatttctgcattttagttataatataatcaaaactatatgttgtcatgtttggacatgcagttta 51809037  T
Q  133 attttaagcttataccgcatatgtttaattttaagctattttaataagaaaagataaaattaagtcaatacagttttggtacaagtcataagccgttttg 232  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51809036 attttaagcttataccgcatatgtttaattttaagctattttaataagaaaagataaaattaagtcaatacagttttggtacaagtcataagccgttttg 51808937  T
Q  233 acttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaa 290  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51808936 acttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaa 51808879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 244 - 333
Target Start/End: Complemental strand, 6987793 - 6987704
Alignment:
Q  244 gctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    ||||||||||||||||||| ||||||||||||||| || | ||| | |||||| ||||||| | |||||| |||||||| ||||||||||    
T  6987793 gctatcctggagagcttatggaaataagttgaaaatagtttatggacatgtcataagttgtatccataagctctcccaaacagtctcaca 6987704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 235 - 331
Target Start/End: Original strand, 2996582 - 2996678
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctca 331  Q
    |||| |||||||||| |||||||| |||  |||||||||||||| |||| ||| | |||||| |||||||||||||||| |||| ||| ||||||||    
T  2996582 ttttcataagctatcttggagagcgtatgaaaataagttgaaaaaagcttatggacatgtcataagttgttttcataagctctctcaaacagtctca 2996678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 315
Target Start/End: Complemental strand, 20936280 - 20936210
Alignment:
Q  245 ctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagtt 315  Q
    ||||||||||||| |||| |||||||| ||||||||||| ||||| || ||| ||||||||||||||||||    
T  20936280 ctatcctggagagattatggaaataaggtgaaaacagcttatgaacatatcataagttgttttcataagtt 20936210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 333
Target Start/End: Original strand, 44319958 - 44320056
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    ||||||||||||||||| |||| |||||  |||| ||||||||| |||||||| | |  ||| || ||||||||||||| |||||||| ||||||||||    
T  44319958 ttttgataagctatcctagagaacttatgaaaattagttgaaaatagctaatggatacatcataatttgttttcataagctctcccaaacagtctcaca 44320056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 334
Target Start/End: Original strand, 11264310 - 11264409
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcacag 334  Q
    |||| |||||| ||||| |||||||||| |||||||||||||||||| | ||| | |||||| |||||| ||  ||| | |||||||| |||||||||||    
T  11264310 ttttcataagccatcctagagagcttatggaaataagttgaaaacagtttatggacatgtcataagttgattctatatgctctcccaaacagtctcacag 11264409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 333
Target Start/End: Original strand, 54426068 - 54426151
Alignment:
Q  251 tggagagcttatagaaataagttgaaaacagctaatgaaaat-gtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||||| |||||  |||||| ||||||| |||| |||||||| |||| ||| ||||||| ||||||||||||||||||||||||    
T  54426068 tggagaacttatgaaaataacttgaaaaaagcttatgaaaattgtcataagctgttttcctaagttctcccaagcagtctcaca 54426151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 313
Target Start/End: Original strand, 1965950 - 1966028
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataag 313  Q
    |||| |||||||||||| || | ||| | |||||||||| ||||||||| ||||| |||||| ||||||||||||||||    
T  1965950 tttttataagctatcctagaaatcttctggaaataagttaaaaacagcttatgaacatgtcataagttgttttcataag 1966028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 333
Target Start/End: Original strand, 23819098 - 23819196
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||| |||||||||| || |||||||||||||||||| |||||||| || ||| | |||||| ||| ||||||| |||  ||| |||| ||||||||||    
T  23819098 ttttcataagctatcttgaagagcttatagaaataagatgaaaacaacttatggacatgtcataagctgttttcttaaactcttccaaacagtctcaca 23819196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 329
Target Start/End: Complemental strand, 50742897 - 50742803
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtct 329  Q
    |||| |||||||||||||||||||||||  |||| ||||||||||||   ||||| ||||||  |  ||||||||||||||||| ||| ||||||    
T  50742897 ttttcataagctatcctggagagcttatgaaaatgagttgaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtct 50742803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 333
Target Start/End: Original strand, 1137726 - 1137819
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||| ||||||  |||||||||| |||||||  |||||||| || ||||| |||||| ||| |||||||||||||||||| || |||| |||||    
T  1137726 ataaactatccaagagagcttatggaaataaactgaaaacaacttatgaacatgtcataagatgttttcataagttctcctaaacagtgtcaca 1137819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 241 - 333
Target Start/End: Complemental strand, 27123407 - 27123315
Alignment:
Q  241 taagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    ||||||||  |||||||||||| ||||||||||||||||| || |   | |||||| ||||||||| |||||| |||| ||| ||||||||||    
T  27123407 taagctattatggagagcttatggaaataagttgaaaacaacttaaagacatgtcataagttgtttccataagctctctcaaacagtctcaca 27123315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 283
Target Start/End: Original strand, 19429723 - 19429766
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagct 283  Q
    ||||||||||||||||||||||| |||||||| |||||||||||    
T  19429723 ataagctatcctggagagcttatggaaataagctgaaaacagct 19429766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 333
Target Start/End: Complemental strand, 25904268 - 25904185
Alignment:
Q  251 tggagagcttatagaaataagttgaaaacagctaatgaaaa-tgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||||| |||||| ||||||| |||||| |||| ||||||| || || ||| |||||||||||| |||||||| ||||||||||    
T  25904268 tggagaacttataaaaataagctgaaaaaagcttatgaaaaatggcataagctgttttcataagctctcccaaacagtctcaca 25904185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 314
Target Start/End: Original strand, 46110212 - 46110291
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagt 314  Q
    |||| |||||||||  | ||||||||||||||||||| |||||||| || ||||  || ||| |||||||||||||||||    
T  46110212 ttttcataagctatgattgagagcttatagaaataagctgaaaacaacttatgagtatatcataagttgttttcataagt 46110291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 333
Target Start/End: Complemental strand, 47118994 - 47118928
Alignment:
Q  267 ataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    ||||| |||||||| | ||| | |||||||  ||||||||||||||||||| |||||||||||||||    
T  47118994 ataagctgaaaacaaccaataacaatgtcatgagttgttttcataagttcttccaagcagtctcaca 47118928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 327
Target Start/End: Original strand, 55064855 - 55064937
Alignment:
Q  246 tatcctggagagcttatagaaataagttgaaaacagctaatgaaaa-tgtcaaaagttgttttcataagttctcccaagcagt 327  Q
    |||| |||||| |||||  ||||||| |||||| ||||| |||||| ||||| |||||||||||| |||||||||||| ||||    
T  55064855 tatcttggagaacttatgaaaataagatgaaaaaagctattgaaaaatgtcataagttgttttcaaaagttctcccaaacagt 55064937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 314
Target Start/End: Original strand, 49803217 - 49803297
Alignment:
Q  235 ttttgataagctatcctggagagcttataga-aataagttgaaaacagctaatgaa-aatgtcaaaagttgttttcataagt 314  Q
    |||||||||||| || |||||| |||| ||| |||||| ||||||||||||||||| ||||||| |||||| ||||||||||    
T  49803217 ttttgataagctttcttggagaactta-agacaataagctgaaaacagctaatgaacaatgtcataagttgctttcataagt 49803297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 330
Target Start/End: Original strand, 29263379 - 29263475
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttca-taagttctcccaagcagtctc 330  Q
    |||| ||||||||||||| ||||||| | |||||||| |||||||| || ||||| || ||| ||| |||||  | |||| ||||||||||||||||    
T  29263379 ttttcataagctatcctgcagagcttgtggaaataagctgaaaacaacttatgaacatatcataagctgtttcaattaagctctcccaagcagtctc 29263475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 333
Target Start/End: Complemental strand, 50800084 - 50799993
Alignment:
Q  241 taagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    ||||||||| |||||| ||| | |||||||| ||||||||||| ||  | |||||| ||||||||| ||| ||||||||||| || |||||||    
T  50800084 taagctatcatggagaactt-tggaaataagctgaaaacagcttatagacatgtcataagttgtttacattagttctcccaaacaatctcaca 50799993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 333
Target Start/End: Original strand, 56249563 - 56249631
Alignment:
Q  265 aaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||||||||||||| |||| |||||||||||| ||| |||||| ||||||| | |||| || |||||||    
T  56249563 aaataagttgaaaaaagcttatgaaaatgtcataagctgttttgataagttgttccaaacaatctcaca 56249631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 307
Target Start/End: Complemental strand, 6466102 - 6466035
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgtttt 307  Q
    ||||||||| || ||||| |||| ||||||||||||||| |||| ||||| || ||| ||||||||||    
T  6466102 ataagctattctagagagattatggaaataagttgaaaatagcttatgaacatctcataagttgtttt 6466035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 283
Target Start/End: Original strand, 14011248 - 14011291
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagct 283  Q
    |||||||||| |||||||||||| |||||||| |||||||||||    
T  14011248 ataagctatcttggagagcttatggaaataagctgaaaacagct 14011291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 327
Target Start/End: Complemental strand, 22236161 - 22236074
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagt 327  Q
    |||| ||| ||||||||||||||  |||||||  |||||||||| ||||| |||||| ||| |||||| ||| | |||||||| ||||    
T  22236161 ataaactagcctggagagcttatgaaaataagcagaaaacagctcatgaacatgtcacaagctgttttaataggctctcccaaacagt 22236074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 321
Target Start/End: Complemental strand, 22662289 - 22662222
Alignment:
Q  254 agagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctccca 321  Q
    ||||| ||| |||||||| |||||| |||| ||||| || ||| ||||| ||||||||||||||||||    
T  22662289 agagcgtatggaaataagctgaaaatagcttatgaacatatcataagtttttttcataagttctccca 22662222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 333
Target Start/End: Complemental strand, 4798627 - 4798529
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||| |||||||||| ||||||||||||  ||||||| | ||||||||| ||| | |||||| |||  |||| |||||| ||| || | ||||||||||    
T  4798627 ttttcataagctatcttggagagcttatgcaaataagctcaaaacagcttatgtacatgtcagaagccgtttccataagctcttcctaacagtctcaca 4798529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 280
Target Start/End: Complemental strand, 5131304 - 5131266
Alignment:
Q  242 aagctatcctggagagcttatagaaataagttgaaaaca 280  Q
    ||||||||||||||||||||| |||||||| ||||||||    
T  5131304 aagctatcctggagagcttatggaaataagctgaaaaca 5131266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 321
Target Start/End: Complemental strand, 11158418 - 11158333
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctccca 321  Q
    |||| |||||||||| | |||||||| | |||||||| ||||||||| | |||  | |||||||| ||||||||||| |||||||||    
T  11158418 ttttcataagctatcttagagagcttgtggaaataagctgaaaacagtttatggga-tgtcaaaatttgttttcatatgttctccca 11158333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 281
Target Start/End: Complemental strand, 18967491 - 18967445
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacag 281  Q
    |||| |||||||||||||  ||| |||||||||||||||||||||||    
T  18967491 ttttcataagctatcctgaggagtttatagaaataagttgaaaacag 18967445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 278
Target Start/End: Original strand, 19422412 - 19422450
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaa 278  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  19422412 ataaactatcctggagagcttatggaaataagttgaaaa 19422450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 333
Target Start/End: Complemental strand, 21043296 - 21043198
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||| ||||||||||||| ||||| |||  |||||   ||||||||||| |||||  ||||| ||| ||||| |||||  |||||||| ||||||||||    
T  21043296 ttttcataagctatcctgaagagcatatgaaaatacactgaaaacagcttatgaacgtgtcataagctgtttccataacctctcccaaacagtctcaca 21043198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 322
Target Start/End: Original strand, 27405823 - 27405905
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaa 322  Q
    |||||||||| |||| | |||||| ||||||| |||||| |||| | |||||||| | |||||||||  || |||||||||||    
T  27405823 ataagctatcatggaaaacttatataaataagctgaaaatagcttaagaaaatgttataagttgtttcgatcagttctcccaa 27405905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 333
Target Start/End: Complemental strand, 28300360 - 28300262
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||| ||| |||||| || |||||||||  |||||||||||||||| || | ||| |||||| | | ||||||||||| ||||| ||| ||||| ||||    
T  28300360 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcataggctgttttcataaattctctcaatcagtcacaca 28300262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 317
Target Start/End: Complemental strand, 2874680 - 2874603
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttct 317  Q
    ||||||||||| |||| |||||| ||||||||  ||||| || | ||| | |||||| ||||||||| ||||||||||    
T  2874680 ataagctatccaggagtgcttatggaaataagcggaaaatagattatggacatgtcataagttgtttccataagttct 2874603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Complemental strand, 7694071 - 7694010
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtca 296  Q
    |||| ||||| |||||||||||| |||| |||||||| |||||||| || ||||| ||||||    
T  7694071 ttttcataagttatcctggagagtttatggaaataagctgaaaacaacttatgaacatgtca 7694010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 327
Target Start/End: Original strand, 29912957 - 29913049
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaa-tgtcaaaagttgttttcataagttctcccaagcagt 327  Q
    |||| |||||||||| |||| | |||||| ||||||| |||||| | |||| ||||| ||||||| | | ||||||||||||||||||| ||||    
T  29912957 ttttcataagctatcttggacaacttataaaaataagctgaaaagaactaaggaaaaatgtcaaa-gctattttcataagttctcccaaacagt 29913049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 333
Target Start/End: Complemental strand, 30066822 - 30066729
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||||||||| ||||||||||||| ||| ||| ||||||||| | ||||| || | | ||| ||||||||||  ||||  |||||| |||||||    
T  30066822 ataagctatcttggagagcttataaaaacaagctgaaaacagattatgaacatattataagctgttttcatattttctttcaagcattctcaca 30066729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 333
Target Start/End: Original strand, 45622307 - 45622348
Alignment:
Q  292 tgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    ||||| ||||||||||||||||||||||| | ||||||||||    
T  45622307 tgtcataagttgttttcataagttctcccgaacagtctcaca 45622348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 312
Target Start/End: Complemental strand, 7839392 - 7839344
Alignment:
Q  265 aaataagttgaaaacagctaatgaaaa-tgtcaaaagttgttttcataa 312  Q
    |||||||||||||| |||| ||||||| ||||| |||||||||||||||    
T  7839392 aaataagttgaaaaaagcttatgaaaattgtcataagttgttttcataa 7839344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 333
Target Start/End: Original strand, 24169279 - 24169371
Alignment:
Q  242 aagctatcctggagagcttatagaaataagttgaaaacagctaatg-aaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||||||| ||||||||||||  |||||||||||||| | || ||| ||||||||| ||| | |||| | |||||||| |||  |||||||||    
T  24169279 aagctatcttggagagcttatgaaaataagttgaaaaaatcttatgaaaaatgtcataagctatttttaaaagttctctcaaatagtctcaca 24169371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 303
Target Start/End: Original strand, 28615532 - 28615600
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttg 303  Q
    |||| ||| |||||| |||||||||||| |||||||| |||||| | |||||| | |||||| ||||||    
T  28615532 tttttataggctatcttggagagcttatggaaataaggtgaaaatatctaatggacatgtcataagttg 28615600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 333
Target Start/End: Complemental strand, 49939981 - 49939913
Alignment:
Q  266 aataagttgaaaacagctaatgaa-aatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||||| ||||||||||| ||||| ||||||| ||| | |||||||||||||| ||||  |||||||||    
T  49939981 aataagctgaaaacagcttatgaacaatgtcataagctcttttcataagttcttccaaatagtctcaca 49939913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 6e-22; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 241 - 330
Target Start/End: Complemental strand, 7918501 - 7918412
Alignment:
Q  241 taagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctc 330  Q
    ||||||||| |||||||||||| ||||||||||| |||||||| ||||| |||||  |||||||||||||||| |||||||| |||||||    
T  7918501 taagctatcttggagagcttattgaaataagttggaaacagcttatgaacatgtcttaagttgttttcataagctctcccaaacagtctc 7918412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 234 - 333
Target Start/End: Original strand, 14949874 - 14949973
Alignment:
Q  234 cttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    ||||| ||||||||||||  |||| ||||||||||||| ||||||||||| ||| | |||||| ||||| |||||||||| ||||| || ||||||||||    
T  14949874 cttttcataagctatcctaaagagattatagaaataagctgaaaacagcttatggacatgtcataagttattttcataagctctcctaaacagtctcaca 14949973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 235 - 333
Target Start/End: Complemental strand, 39551270 - 39551172
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||| ||||||| |||||||||||||||| ||||||||| |||||||||  || | |||||| ||||||||| ||||| ||||||||| |||| |||||    
T  39551270 ttttcataagctttcctggagagcttataaaaataagttaaaaacagcttttggacatgtcataagttgtttccataaattctcccaaacagtttcaca 39551172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 235 - 332
Target Start/End: Complemental strand, 42215367 - 42215270
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcac 332  Q
    |||| ||| |||||||||||||||||||  ||||||| ||||||||||| ||||| | |||| ||| ||||||||| ||||||||||| |||| ||||    
T  42215367 ttttcatatgctatcctggagagcttatgtaaataagctgaaaacagcttatgaacaagtcataagctgttttcattagttctcccaaacagtgtcac 42215270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 234 - 333
Target Start/End: Original strand, 30918121 - 30918219
Alignment:
Q  234 cttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    ||||| ||||| | || |||||||||||| |||||||| |||||||| || |||||| ||||| |||||||||||||||| |||| ||| ||||||||||    
T  30918121 cttttcataagttttcttggagagcttatggaaataagctgaaaacaacttatgaaa-tgtcacaagttgttttcataagctctctcaaacagtctcaca 30918219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 331
Target Start/End: Complemental strand, 31716283 - 31716191
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaa-aatgtcaaaagttgttttcataagttctcccaagcagtctca 331  Q
    |||||||||| ||||||  ||||||||||||| |||||| |||| ||||| ||||||| ||| |||||||| ||||||||| || ||||||||    
T  31716283 ataagctatcttggagaagttatagaaataagctgaaaaaagcttatgaagaatgtcataagctgttttcaaaagttctccgaaacagtctca 31716191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 319
Target Start/End: Complemental strand, 2458622 - 2458543
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcc 319  Q
    |||||||||||| |||||||||| |||||||  ||||||||||| ||||| ||| || ||| ||| ||||||||||||||    
T  2458622 ataagctatcctagagagcttatggaaataaactgaaaacagcttatgaacatgccataagctgtcttcataagttctcc 2458543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 331
Target Start/End: Original strand, 43569174 - 43569265
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctca 331  Q
    ||||||||||||||||| || || ||||| |||||||||||||| |||| ||||| | ||  |||||||| || |||||||||||| |||||    
T  43569174 ataagctatcctggagaactaatggaaattagttgaaaacagcttatgagaatgtaataacctgttttcaaaaattctcccaagcactctca 43569265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 316
Target Start/End: Original strand, 10383913 - 10383975
Alignment:
Q  254 agagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttc 316  Q
    ||||||||| |||||||| || |||||||| |||||||||||| ||| |||||||||||||||    
T  10383913 agagcttatggaaataagctgtaaacagcttatgaaaatgtcataagctgttttcataagttc 10383975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Complemental strand, 32841017 - 32840951
Alignment:
Q  265 aaataagttgaaaacagctaatgaa-aatgtcaaaagttgttttcataagttctcccaagcagtctc 330  Q
    ||||||| |||||||| || ||||| ||||||| ||||||||||||||||||||||||| |||||||    
T  32841017 aaataagctgaaaacaacttatgaacaatgtcataagttgttttcataagttctcccaaacagtctc 32840951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 333
Target Start/End: Original strand, 43504760 - 43504858
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||| |||||||||| |||||| ||||| |||||||| ||||||||||| || || | |||  ||||||||||||| |||||||| || ||||| ||||    
T  43504760 tttttataagctatcttggagaacttatggaaataagctgaaaacagcttataaacaagtcgtaagttgttttcatcagttctccgaaacagtcacaca 43504858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 333
Target Start/End: Original strand, 2482881 - 2482970
Alignment:
Q  244 gctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||||| |||| | |||||||||||||| ||||||||||| |||||  | ||   |||||||||| ||||||||||||| ||||||||||    
T  2482881 gctatcttggataacttatagaaataagctgaaaacagcttatgaacttatcgtgagttgttttcttaagttctcccaaacagtctcaca 2482970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 317
Target Start/End: Original strand, 3254239 - 3254316
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttct 317  Q
    ||||||||||||  ||||  |||||||||||| ||||||||||| ||||| |||||| ||| ||||||| ||||||||    
T  3254239 ataagctatcctatagagtgtatagaaataagctgaaaacagcttatgaacatgtcataagctgttttcttaagttct 3254316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 20672759 - 20672820
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtca 296  Q
    |||| |||||||||||||||||||||||  ||||||| ||||||||||| ||||| ||||||    
T  20672759 tttttataagctatcctggagagcttatgaaaataagctgaaaacagcttatgaacatgtca 20672820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 240 - 331
Target Start/End: Original strand, 34849117 - 34849209
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtca-aaagttgttttcataagttctcccaagcagtctca 331  Q
    ||||||| || || ||| ||||| ||||| || ||||||| ||| ||||| |||||| |||||||||||||| ||||||||||| ||||||||    
T  34849117 ataagctttcttgtagaacttatggaaatcagctgaaaacggcttatgaacatgtcataaagttgttttcattagttctcccaaacagtctca 34849209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 265 - 313
Target Start/End: Complemental strand, 43368731 - 43368683
Alignment:
Q  265 aaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataag 313  Q
    |||||||||||||| |||||||||| |||||| ||||||||||||||||    
T  43368731 aaataagttgaaaatagctaatgaacatgtcataagttgttttcataag 43368683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 333
Target Start/End: Original strand, 8629484 - 8629563
Alignment:
Q  254 agagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||||||||| | | |||||||||||| || ||||  |||||| ||||||||||||||||||||| ||| | ||||||||    
T  8629484 agagcttataaatagaagttgaaaacaacttatgatcatgtcataagttgttttcataagttctctcaaacggtctcaca 8629563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 333
Target Start/End: Complemental strand, 35644033 - 35643950
Alignment:
Q  251 tggagagcttatagaaataagttgaaaacagctaatgaaaa-tgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    ||||||||||||  |||||||||||||| |||| ||||||| ||||| ||  | |||||||||||| |||||| ||||||||||    
T  35644033 tggagagcttatgaaaataagttgaaaaaagcttatgaaaattgtcataaactattttcataagttatcccaaacagtctcaca 35643950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 321
Target Start/End: Complemental strand, 11813166 - 11813080
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctccca 321  Q
    |||| |||||||||| |  |||||||| ||||||||| ||||||||||  ||| | |||||| || |||||| ||||||||||||||    
T  11813166 ttttcataagctatcttcaagagcttacagaaataagctgaaaacagcctatggatatgtcataaattgtttccataagttctccca 11813080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 329
Target Start/End: Original strand, 12851185 - 12851279
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtct 329  Q
    |||| ||||||| |||| ||||||||||  |||||||  ||||||| || ||||| |||| | ||| |||||||||||||| |||||| ||||||    
T  12851185 ttttcataagctttccttgagagcttatgaaaataagccgaaaacatcttatgaacatgttataagctgttttcataagttttcccaaacagtct 12851279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 332
Target Start/End: Original strand, 27028840 - 27028938
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatg-aaaatgtcaaaagttgttttcataagttctcccaagcagtctcac 332  Q
    |||| |||||||||| ||||||||||||  ||||||| |||||| |||| ||| ||||||||  ||| |||||||| || ||||||||| || ||||||    
T  27028840 ttttcataagctatcttggagagcttatgaaaataagctgaaaatagcttatgaaaaatgtcctaagctgttttcagaatttctcccaaacaatctcac 27028938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 329
Target Start/End: Complemental strand, 30191202 - 30191108
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtct 329  Q
    |||||||||||||||||| |  | |||| |||||||| ||||||||  |  |||| |||||| ||||||||| |||||| |||||||| ||||||    
T  30191202 ttttgataagctatcctgaaatgtttatggaaataagctgaaaacaagttttgaacatgtcataagttgtttccataagctctcccaaacagtct 30191108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 283
Target Start/End: Original strand, 5088868 - 5088909
Alignment:
Q  242 aagctatcctggagagcttatagaaataagttgaaaacagct 283  Q
    |||| |||||||||||||||| ||||||||||||||||||||    
T  5088868 aagcgatcctggagagcttattgaaataagttgaaaacagct 5088909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 319
Target Start/End: Original strand, 13459673 - 13459738
Alignment:
Q  254 agagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcc 319  Q
    |||||||||  ||||| | ||||||||| | |||||||||||| ||| ||||||||||||||||||    
T  13459673 agagcttatgaaaataggctgaaaacagtttatgaaaatgtcataagctgttttcataagttctcc 13459738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 333
Target Start/End: Original strand, 26771304 - 26771373
Alignment:
Q  265 aaataagttgaaaacagctaatgaaaat-gtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    ||||||||||||||  |||  ||||||| |||| ||| ||||||||||||||||||||| ||||||||||    
T  26771304 aaataagttgaaaaaggcttttgaaaattgtcataagctgttttcataagttctcccaaacagtctcaca 26771373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 318
Target Start/End: Original strand, 11183561 - 11183637
Alignment:
Q  242 aagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctc 318  Q
    |||||| |||||||||||||| |||||||| ||||||||||| ||  | || ||| |||||||||| ||||| ||||    
T  11183561 aagctaccctggagagcttatggaaataagctgaaaacagcttatagacatatcataagttgtttttataagctctc 11183637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 278
Target Start/End: Original strand, 1433557 - 1433600
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaa 278  Q
    |||| |||||||||||||||||||||||  ||||||||||||||    
T  1433557 ttttcataagctatcctggagagcttatgaaaataagttgaaaa 1433600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 333
Target Start/End: Complemental strand, 2488006 - 2487971
Alignment:
Q  298 aagttgttttcataagttctcccaagcagtctcaca 333  Q
    ||||||||||||||||||||||||| ||||||||||    
T  2488006 aagttgttttcataagttctcccaaacagtctcaca 2487971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 278
Target Start/End: Complemental strand, 6509364 - 6509321
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaa 278  Q
    |||| ||||||||||||||||||||||| |||||||| ||||||    
T  6509364 ttttcataagctatcctggagagcttattgaaataaggtgaaaa 6509321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 278
Target Start/End: Original strand, 7514826 - 7514865
Alignment:
Q  239 gataagctatcctggagagcttatagaaataagttgaaaa 278  Q
    ||||||||||  ||||||||||||||||||||||||||||    
T  7514826 gataagctatattggagagcttatagaaataagttgaaaa 7514865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 333
Target Start/End: Original strand, 28763405 - 28763476
Alignment:
Q  264 gaaataagttgaaaaca-gctaatgaaaat-gtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    ||||||||||||||| | ||| |||||||| || | ||| ||||||||||||||||||||| ||||||||||    
T  28763405 gaaataagttgaaaaaaagcttatgaaaattgttataagctgttttcataagttctcccaaacagtctcaca 28763476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 334
Target Start/End: Complemental strand, 41442514 - 41442415
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcacag 334  Q
    |||| |||||||||  |||| | |||||| |  |||| ||||||||||  ||||| |||||| || |||||||||||||||||  ||| |||||||||||    
T  41442514 ttttcataagctatattggaaaacttatataggtaagctgaaaacagcatatgaacatgtcataaattgttttcataagttctgtcaaacagtctcacag 41442415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 322
Target Start/End: Original strand, 7646232 - 7646302
Alignment:
Q  252 ggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaa 322  Q
    ||||||||||| |||||||| |||||| |||| || || |||||| |||  |||||||||| |||||||||    
T  7646232 ggagagcttatggaaataagctgaaaatagctgatcaacatgtcataagcagttttcataaattctcccaa 7646302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 328
Target Start/End: Original strand, 10120781 - 10120859
Alignment:
Q  251 tggagagcttatagaaataagttgaaaacagctaatga-aaatgtcaaaagttgttttcataagttctcccaagcagtc 328  Q
    |||||| |||||  ||||||| ||||||||||  |||| |||||||| ||| ||||||||||||||||| ||| |||||    
T  10120781 tggagaacttatgaaaataagctgaaaacagcatatgataaatgtcataagctgttttcataagttctctcaaacagtc 10120859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 27492976 - 27493034
Alignment:
Q  265 aaataagttgaaaacagctaatgaa-aatgtcaaaagttgttttcataagttctcccaa 322  Q
    |||||||||||||| |||| ||||| ||||||| || ||||||||||||| ||||||||    
T  27492976 aaataagttgaaaatagcttatgaacaatgtcacaacttgttttcataagctctcccaa 27493034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 289
Target Start/End: Complemental strand, 33714297 - 33714243
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaa 289  Q
    |||| ||||||||||  |||||||||||| ||||||| ||||||||||| |||||    
T  33714297 ttttcataagctatctgggagagcttataaaaataagctgaaaacagcttatgaa 33714243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 27645931 - 27645996
Alignment:
Q  253 gagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctc 318  Q
    |||||||||||||||||||||||||| |||| ||  | |||||| ||||||| | |||||| ||||    
T  27645931 gagagcttatagaaataagttgaaaatagcttatagatatgtcataagttgtatgcataagctctc 27645996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 331
Target Start/End: Complemental strand, 28784856 - 28784758
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaa---gttgttttcataagttctcccaagcagtctca 331  Q
    |||| |||||||||| | |||||||| || ||||||| |||||| |||| ||||| |||||| ||   |||||||||||||| ||||||||  |||||||    
T  28784856 ttttcataagctatcttagagagcttgtaaaaataagctgaaaa-agcttatgaacatgtcataataagttgttttcataagctctcccaaaaagtctca 28784758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 333
Target Start/End: Complemental strand, 36963385 - 36963316
Alignment:
Q  265 aaataagttgaaaacagctaatgaaaat-gtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||||||||| ||| ||||  ||||||| |||||||| ||||||  ||||||||||||| ||||||||||    
T  36963385 aaataagttgtaaaaagcttttgaaaattgtcaaaagctgtttttgtaagttctcccaaacagtctcaca 36963316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 280
Target Start/End: Complemental strand, 38036173 - 38036128
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaaca 280  Q
    ||||||| ||||||| |||||||||||| |||||||| ||||||||    
T  38036173 ttttgattagctatcttggagagcttattgaaataagctgaaaaca 38036128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 317
Target Start/End: Complemental strand, 779092 - 779040
Alignment:
Q  265 aaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttct 317  Q
    ||||||| |||||||| || ||||| |||||| ||||||||||| ||||||||    
T  779092 aaataagatgaaaacaacttatgaacatgtcataagttgttttcgtaagttct 779040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 322
Target Start/End: Original strand, 1930044 - 1930132
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaa-aatgtcaaaagttgttttcataagttctcccaa 322  Q
    |||| |||||||||| ||| || ||| |  ||||||| ||||||||||| ||||| ||||||| ||  |||||||| ||||||||||||    
T  1930044 ttttcataagctatcttggtgaccttgtgaaaataagctgaaaacagcttatgaacaatgtcataaactgttttcacaagttctcccaa 1930132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 4390222 - 4390306
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcc 319  Q
    |||| ||||||| ||| | ||||||||  ||||||||  ||||||| || ||||| ||| || ||||||||||||||| ||||||    
T  4390222 ttttcataagctctccagaagagcttaatgaaataaggggaaaacaacttatgaacatgccataagttgttttcataaattctcc 4390306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 283
Target Start/End: Original strand, 13652224 - 13652272
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagct 283  Q
    |||| ||||||||| ||||||||||||  ||||||||| ||||||||||    
T  13652224 tttttataagctattctggagagcttaaggaaataagtagaaaacagct 13652272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 283
Target Start/End: Original strand, 13710867 - 13710915
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagct 283  Q
    |||| ||||||||| ||||||||||||  ||||||||| ||||||||||    
T  13710867 tttttataagctattctggagagcttaaggaaataagtagaaaacagct 13710915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 312
Target Start/End: Complemental strand, 15247808 - 15247760
Alignment:
Q  265 aaataagttgaaaacagctaatgaa-aatgtcaaaagttgttttcataa 312  Q
    |||||||||||||| | |||||||| ||||||| |||||||||||||||    
T  15247808 aaataagttgaaaaaaactaatgaacaatgtcataagttgttttcataa 15247760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 331
Target Start/End: Original strand, 26410301 - 26410385
Alignment:
Q  248 tcctggagagcttatagaaataa-gttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctca 331  Q
    ||||||||||||||| ||||||| | | |||||||||  || | ||||||  || ||||| |||||| |||||||||||||||||    
T  26410301 tcctggagagcttatggaaataaagctaaaaacagcttctggacatgtcatgagctgtttccataagctctcccaagcagtctca 26410385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 39881813 - 39881769
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaac 279  Q
    |||| |||||||||| |||||||||||| |||||||| |||||||    
T  39881813 tttttataagctatcatggagagcttatggaaataagctgaaaac 39881769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 4e-20; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 235 - 333
Target Start/End: Complemental strand, 37611276 - 37611178
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||| |||||||||| |||||||||||| |||||||  ||||||||||| ||||| |||||| |||||||||||||||| |||| ||| || |||||||    
T  37611276 ttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctctctcaaacaatctcaca 37611178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 235 - 333
Target Start/End: Complemental strand, 37788006 - 37787908
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||| |||||||||| |||||||||||| |||||||  ||||||||||| ||||| |||||| |||||||||||||||| |||| ||| || |||||||    
T  37788006 ttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctctctcaaacaatctcaca 37787908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 240 - 327
Target Start/End: Original strand, 4619721 - 4619808
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagt 327  Q
    |||||||||| |||||| ||||| |||||||| ||||| ||||| ||||| ||||||  ||||||||||||||| |||||||| ||||    
T  4619721 ataagctatcatggagaacttatggaaataaggtgaaaccagcttatgaacatgtcattagttgttttcataagctctcccaaacagt 4619808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 318
Target Start/End: Original strand, 17368685 - 17368768
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctc 318  Q
    |||| |||||||||| ||||||| |||| |||||||| ||||||| ||  ||||| |||||| |||||||||||||||||||||    
T  17368685 ttttcataagctatcttggagaggttatggaaataagctgaaaactgcatatgaacatgtcataagttgttttcataagttctc 17368768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 322
Target Start/End: Complemental strand, 17258944 - 17258857
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaa 322  Q
    |||| |||| |||||||| |||||||||  ||||||| ||||||||||| ||||| |||||| ||| | |||||||| ||||||||||    
T  17258944 ttttcataaactatcctgaagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagctattttcataggttctcccaa 17258857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 333
Target Start/End: Complemental strand, 37526245 - 37526162
Alignment:
Q  250 ctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    ||||||||||||| |||||||| ||||||||||| || || |||||| | ||||| |||||||| |||| ||| ||||||||||    
T  37526245 ctggagagcttatggaaataagctgaaaacagcttattaacatgtcataggttgtattcataagctctctcaaacagtctcaca 37526162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 333
Target Start/End: Original strand, 7674657 - 7674755
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||| |||||||||| ||||||  || |  ||||||| |||||||| || || || |||||| ||||||||| |||||||||| |||||||||||||||    
T  7674657 ttttcataagctatcttggagaatttgtgaaaataagctgaaaacaccttataaacatgtcataagttgtttccataagttcttccaagcagtctcaca 7674755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 336
Target Start/End: Complemental strand, 12460055 - 12459961
Alignment:
Q  242 aagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcacaggt 336  Q
    |||||||| || |||||||||  |||||||   |||||| |  ||||| |||||| |||||||||||||| |||||||||| |||||||||||||    
T  12460055 aagctatcttgcagagcttatgaaaataagccaaaaacaacatatgaacatgtcataagttgttttcataggttctcccaaacagtctcacaggt 12459961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 333
Target Start/End: Complemental strand, 37588421 - 37588323
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||| ||||| ||| ||||||||||||| |||||||| ||||||||||| || || || ||| | ||||| |||||||| |||| ||| ||||||||||    
T  37588421 ttttcataagttattctggagagcttatggaaataagctgaaaacagcttattaacatttcataggttgtattcataagctctctcaaacagtctcaca 37588323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 251 - 333
Target Start/End: Complemental strand, 37690681 - 37690599
Alignment:
Q  251 tggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||||||||||| |||||||| ||||||||||| || || |||||| | ||||| |||||||| |||| ||| ||||||||||    
T  37690681 tggagagcttatggaaataagctgaaaacagcttattaacatgtcataggttgtattcataagctctctcaaacagtctcaca 37690599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 281
Target Start/End: Complemental strand, 40205135 - 40205089
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacag 281  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||    
T  40205135 ttttcataagctatcctggagagcttatagaaataagctgaaaacag 40205089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 332
Target Start/End: Original strand, 2468439 - 2468538
Alignment:
Q  234 cttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtca-aaagttgttttcataagttctcccaagcagtctcac 332  Q
    ||||| ||||||||||||| |||| |||| ||| |||| | ||||||||| ||| | |||||| ||| |||||| |||||||||||| || |||||||||    
T  2468439 ctttttataagctatcctgaagagtttatggaagtaagctcaaaacagcttatggacatgtcataaaattgtttccataagttctccaaaacagtctcac 2468538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 333
Target Start/End: Original strand, 39248143 - 39248206
Alignment:
Q  270 agttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||||||||||||| ||||| | |||| ||| |||||| |||||||||||||| ||||||||||    
T  39248143 agttgaaaacagcttatgaacaagtcataagctgtttttataagttctcccaaacagtctcaca 39248206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 282
Target Start/End: Complemental strand, 3951872 - 3951830
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagc 282  Q
    ||||||||| ||||| |||||||||||||||||||||||||||    
T  3951872 ataagctattctggacagcttatagaaataagttgaaaacagc 3951830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 14295521 - 14295611
Alignment:
Q  241 taagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctca 331  Q
    |||||||||||||||||||| ||||| |||| ||||||||||| ||  | || ||| ||| |||||||||||| |||| ||  ||||||||    
T  14295521 taagctatcctggagagcttttagaagtaagctgaaaacagcttatcgacatatcataagctgttttcataagctctctcagacagtctca 14295611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 333
Target Start/End: Complemental strand, 28586819 - 28586729
Alignment:
Q  243 agctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    ||||||||| |||||||||| |||||||| ||||||||||| | | | |||||| ||| | ||| |||||| |||||||| |||| |||||    
T  28586819 agctatcctagagagcttatcgaaataagctgaaaacagcttacggatatgtcataagctatttccataagctctcccaaacagtttcaca 28586729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 296
Target Start/End: Complemental strand, 33533593 - 33533539
Alignment:
Q  242 aagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtca 296  Q
    |||||||| |||||||||||| ||||||||||||||||| || ||||| ||||||    
T  33533593 aagctatcttggagagcttatggaaataagttgaaaacaacttatgaatatgtca 33533539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 331
Target Start/End: Original strand, 7907890 - 7907987
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaa-gttgttttcataagttctcccaagcagtctca 331  Q
    |||||||||||| || ||||||||||||  || |||| |||||||| || ||||| || |||  | |||||||||||||||||| |||| ||||||||    
T  7907890 ttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacagtctca 7907987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 273 - 333
Target Start/End: Complemental strand, 16458002 - 16457941
Alignment:
Q  273 tgaaaacagctaatgaaaa-tgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||||| |||| ||||||| ||||| ||| ||||||||||||||||||||| ||||||||||    
T  16458002 tgaaaagagcttatgaaaactgtcataagctgttttcataagttctcccaaacagtctcaca 16457941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 336
Target Start/End: Complemental strand, 499775 - 499691
Alignment:
Q  252 ggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcacaggt 336  Q
    |||||| |||| |||||||| |||||||| ||  | || |||||| ||| ||||||||||||||||||||| ||| || ||||||    
T  499775 ggagagtttatggaaataagctgaaaacaacttgttaacatgtcataagctgttttcataagttctcccaaacagcctaacaggt 499691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 283
Target Start/End: Original strand, 11684423 - 11684471
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagct 283  Q
    |||| ||||||||| ||||||||||||  ||||||||||||||||||||    
T  11684423 ttttcataagctatgctggagagcttacggaaataagttgaaaacagct 11684471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 319
Target Start/End: Complemental strand, 12857394 - 12857314
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaat-gtcaaaagttgttttcataagttctcc 319  Q
    |||||||||  |||||| |||| | ||||||| |||||| ||||  ||||||| |||| ||||||||||||||||||||||    
T  12857394 ataagctatattggagaacttacaaaaataagctgaaaaaagcttgtgaaaattgtcataagttgttttcataagttctcc 12857314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 322
Target Start/End: Original strand, 39105473 - 39105561
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaa-aatgtcaaaagttgttttcataagttctcccaa 322  Q
    |||| |||||||||| |||||| |||||  ||||||| | |||| |||| ||||| ||||||| ||| ||||||||||| |||||||||    
T  39105473 ttttcataagctatcttggagaacttatgaaaataagctaaaaatagcttatgaacaatgtcataagctgttttcataaattctcccaa 39105561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 330
Target Start/End: Original strand, 2568667 - 2568762
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctc 330  Q
    |||| |||||||||| ||||||||| ||  ||||||| | |||| | || ||||| |||||| ||| |||||||||||||||| | || |||||||    
T  2568667 ttttcataagctatcatggagagctaatgaaaataagctaaaaataacttatgaatatgtcataagctgttttcataagttcttctaaacagtctc 2568762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 333
Target Start/End: Original strand, 7984978 - 7985077
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaa-aatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||| |||||||||| ||||||  ||||  ||||||| ||||||||||| ||||| || |||| ||| ||||||| |||| ||||||||  |||||||||    
T  7984978 ttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatgaacaacgtcacaagctgttttcttaagctctcccaaatagtctcaca 7985077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 318
Target Start/End: Complemental strand, 10125763 - 10125696
Alignment:
Q  251 tggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctc 318  Q
    ||||||||||||  ||||||| |||||||| || || || |||||| ||||||||| |||||||||||    
T  10125763 tggagagcttatgaaaataagctgaaaacaccttatcaacatgtcataagttgtttacataagttctc 10125696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 246 - 333
Target Start/End: Original strand, 11457119 - 11457205
Alignment:
Q  246 tatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||| ||||||||||||||||||||  || |||||||| ||| | |||||| ||||||||| |||||| ||| | || ||||||||||    
T  11457119 tatcttggagagcttatagaaataatatg-aaacagcttatggacatgtcataagttgtttccataagctcttcaaaacagtctcaca 11457205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 318
Target Start/End: Complemental strand, 12242771 - 12242688
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctc 318  Q
    |||| |||||||||| |||||||||||| ||| |||| |||||||| ||||||   |||||| ||||| ||| |||||| ||||    
T  12242771 ttttcataagctatcttggagagcttatggaagtaagctgaaaacaactaatgttcatgtcataagttttttccataagctctc 12242688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 333
Target Start/End: Original strand, 6593308 - 6593406
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    ||||||||||||| | | ||||||||||  ||||||| |||||| ||||  | || |  ||||||| ||||||||||| |||||||||  |||||||||    
T  6593308 ttttgataagctaccttagagagcttatgaaaataagctgaaaagagcttgttaacacatcaaaagctgttttcataaattctcccaaatagtctcaca 6593406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 283
Target Start/End: Complemental strand, 26390845 - 26390803
Alignment:
Q  241 taagctatcctggagagcttatagaaataagttgaaaacagct 283  Q
    |||| ||||||||||||||||| |||||||| |||||||||||    
T  26390845 taagttatcctggagagcttatggaaataaggtgaaaacagct 26390803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 333
Target Start/End: Original strand, 29925855 - 29925949
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaat-gtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||||||||  |||||| |||||  |||||||||||||| | |  ||||| || |||| ||| ||||||||||||||||||||| | ||||||||    
T  29925855 ataagctatattggagaacttatgaaaataagttgaaaaaaacacatgaacattgtcataagctgttttcataagttctcccaaacggtctcaca 29925949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 277
Target Start/End: Complemental strand, 36774768 - 36774726
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaa 277  Q
    |||| ||||||||||||||||||||||| |||||||| |||||    
T  36774768 tttttataagctatcctggagagcttatggaaataagctgaaa 36774726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 313
Target Start/End: Complemental strand, 37794735 - 37794681
Alignment:
Q  259 ttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataag 313  Q
    |||| |||||||| | ||||||||| ||||| |||||| ||||||||||||||||    
T  37794735 ttatcgaaataagctcaaaacagcttatgaacatgtcataagttgttttcataag 37794681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 333
Target Start/End: Complemental strand, 42500297 - 42500205
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaa-tgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||||||||  |||||| |||||  |||||||||||||| |||| ||||||| ||||  ||||||||| |||||||||||| ||| |||||||||    
T  42500297 ataagctatattggagaacttatgaaaataagttgaaaa-agcttatgaaaattgtcgtaagttgtttccataagttctccaaag-agtctcaca 42500205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 3520640 - 3520685
Alignment:
Q  288 aaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||| |||| ||| ||||||||||||||||||||| ||||||||||    
T  3520640 aaaaagtcataagatgttttcataagttctcccaaacagtctcaca 3520685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 280
Target Start/End: Complemental strand, 18543257 - 18543213
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaaca 280  Q
    |||| ||||||||||||||||||||||| |||||||| ||||||||    
T  18543257 ttttcataagctatcctggagagcttat-gaaataagctgaaaaca 18543213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 280
Target Start/End: Original strand, 18875370 - 18875415
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaaca 280  Q
    |||| ||||| ||||||||||||||||| |||| ||||||||||||    
T  18875370 ttttaataagatatcctggagagcttatggaaacaagttgaaaaca 18875415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 302
Target Start/End: Complemental strand, 32194134 - 32194073
Alignment:
Q  241 taagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagtt 302  Q
    ||||||||| | ||||||||||| ||||||| |||||||| || ||| |||||||| |||||    
T  32194134 taagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 32194073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 322
Target Start/End: Original strand, 1191685 - 1191773
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttg-aaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaa 322  Q
    |||| ||||||||||  ||||||||||| |||| ||| || |||| |||| ||||| |||||||||| | ||| |||||| ||||||||    
T  1191685 ttttcataagctatcaaggagagcttattgaaagaagctgaaaaatagcttatgaacatgtcaaaagctttttccataagctctcccaa 1191773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 318
Target Start/End: Original strand, 8089964 - 8090028
Alignment:
Q  254 agagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctc 318  Q
    |||||||||  ||||||| ||||||||||| | ||| || ||| |||||||||||||||| ||||    
T  8089964 agagcttatgaaaataagctgaaaacagcttaggaatatatcataagttgttttcataagctctc 8090028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 311
Target Start/End: Complemental strand, 11615714 - 11615639
Alignment:
Q  233 acttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcata 311  Q
    |||||| |||||||||  ||||||||||||  |||||||    ||||||||||||||  ||||| ||||||||||||||    
T  11615714 acttttcataagctatattggagagcttatgaaaataagc---aaacagctaatgaacgtgtcataagttgttttcata 11615639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 319
Target Start/End: Complemental strand, 12857761 - 12857681
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaat-gtcaaaagttgttttcataagttctcc 319  Q
    |||||||||  |||||| |||||  ||||||| |||||| || |  ||||||| |||| ||||||||||||||||||||||    
T  12857761 ataagctatattggagaacttatgaaaataagctgaaaaaaggttgtgaaaattgtcataagttgttttcataagttctcc 12857681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 312
Target Start/End: Complemental strand, 36542338 - 36542266
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataa 312  Q
    |||||||||||| |||||||| | |||||||||| |||||||||  || | |||||| ||| ||||| |||||    
T  36542338 ataagctatcctagagagcttgtggaaataagttaaaaacagcttctggacatgtcataagatgtttccataa 36542266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 330
Target Start/End: Original strand, 37954695 - 37954791
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaa-tgtcaaaagttgttttcataagttctcccaagcagtctc 330  Q
    |||| |||||||||  |||||| | |||  |||||||||||||| |||||||||||| | ||| ||| |||||||||||  |||||| | |||||||    
T  37954695 tttttataagctatattggagaacatatgaaaataagttgaaaaaagctaatgaaaattttcataagctgttttcataaactctcccgaacagtctc 37954791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 283
Target Start/End: Original strand, 38028574 - 38028606
Alignment:
Q  251 tggagagcttatagaaataagttgaaaacagct 283  Q
    ||||||||||||||| |||||||||||||||||    
T  38028574 tggagagcttatagagataagttgaaaacagct 38028606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 322
Target Start/End: Original strand, 41535446 - 41535478
Alignment:
Q  290 aatgtcaaaagttgttttcataagttctcccaa 322  Q
    ||||||| |||||||||||||||||||||||||    
T  41535446 aatgtcataagttgttttcataagttctcccaa 41535478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 235 - 332
Target Start/End: Original strand, 37273143 - 37273240
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcac 332  Q
    |||| |||||||||| |||||| ||||| ||||||||||||||||| || ||| | |||||| ||||||||| |||||| |||||||| |||||||||    
T  37273143 ttttcataagctatcttggagaacttatggaaataagttgaaaacaacttatggacatgtcataagttgtttccataagctctcccaaacagtctcac 37273240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 235 - 331
Target Start/End: Original strand, 21574499 - 21574595
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctca 331  Q
    |||| |||||||| | |||||||||||| |||||||| | ||| ||||| ||||| |||||| |||||||||||||||| |||||||| ||||||||    
T  21574499 tttttataagctaacatggagagcttatggaaataagctaaaagcagcttatgaacatgtcataagttgttttcataagctctcccaaacagtctca 21574595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 235 - 333
Target Start/End: Complemental strand, 14548782 - 14548684
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||| ||||| ||| ||||||||||||| |||||||| ||||||||||  || ||||||||| | |||||||||||||| |||| ||| ||||||||||    
T  14548782 ttttcataagttattctggagagcttatggaaataagctgaaaacagcctattaaaatgtcatacgttgttttcataagctctctcaaacagtctcaca 14548684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 1816592 - 1816676
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcc 319  Q
    |||| ||||||||| |||||||||||||  ||||||| ||||||||||  |||||||||||| ||||| |||||||| |||||||    
T  1816592 ttttcataagctatactggagagcttatcaaaataagctgaaaacagcctatgaaaatgtcataagttattttcatatgttctcc 1816676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 240 - 312
Target Start/End: Complemental strand, 2152234 - 2152162
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataa 312  Q
    |||| ||||||| ||||||||||||||| ||||||||||||||| | ||| |||||| |||||||||||||||    
T  2152234 ataaactatccttgagagcttatagaaacaagttgaaaacagcttacgaacatgtcataagttgttttcataa 2152162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 333
Target Start/End: Original strand, 21367676 - 21367775
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaa-aatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||| |||||||||| |||||| |||||  ||||||| |||||||||||  |||| ||||||| ||| ||||||||||||||||||||| ||||| ||||    
T  21367676 ttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttgtgaacaatgtcataagctgttttcataagttctcccaaacagtcccaca 21367775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 319
Target Start/End: Complemental strand, 41644506 - 41644422
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcc 319  Q
    |||| |||||||||| | |||| ||||  |||||||| ||||||||||| |||||||||||  |||||||||| |||||||||||    
T  41644506 ttttcataagctatcgtagagatcttaaggaaataagctgaaaacagcttatgaaaatgtcccaagttgtttttataagttctcc 41644422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 322
Target Start/End: Complemental strand, 36646443 - 36646356
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaa 322  Q
    |||| |||||||||||| ||||| ||||||||||||| ||||||||||| ||| | ||| || |||| |||| |||||| ||||||||    
T  36646443 ttttcataagctatcctagagagtttatagaaataagatgaaaacagcttatggacatgccataagtggtttccataagctctcccaa 36646356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 306
Target Start/End: Complemental strand, 3044311 - 3044249
Alignment:
Q  244 gctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttt 306  Q
    |||| ||||||||||||||  ||||||||||||||||||| ||||| |||||| |||||||||    
T  3044311 gctaacctggagagcttatgaaaataagttgaaaacagcttatgaacatgtcataagttgttt 3044249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 333
Target Start/End: Original strand, 47513670 - 47513760
Alignment:
Q  243 agctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    ||||||| ||||||||||||  |||||| ||||||||| || |||||  ||||| || |||||||||||||| ||||| | ||||||||||    
T  47513670 agctatcttggagagcttatgaaaataaattgaaaacaacttatgaacgtgtcataacttgttttcataagtcctcccgaacagtctcaca 47513760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 337
Target Start/End: Original strand, 50952347 - 50952444
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcacaggtt 337  Q
    |||| ||||| |||||||||||| |||||||| | ||||||| | ||||| |||||| ||| ||||||| || |||||| | | ||||||||||||||    
T  50952347 ataaactatcttggagagcttatggaaataagcttaaaacagtttatgaacatgtcataagctgttttcgtacgttctctcgaacagtctcacaggtt 50952444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 283
Target Start/End: Complemental strand, 44284141 - 44284093
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagct 283  Q
    |||| |||||||||||||||||||||||||||||||| |||||| ||||    
T  44284141 ttttcataagctatcctggagagcttatagaaataagctgaaaatagct 44284093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 319
Target Start/End: Complemental strand, 49465726 - 49465642
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcc 319  Q
    |||| ||||||||| ||||||| ||||| |||||||| | |||| | |||||||| |||| | ||| ||||||||||||||||||    
T  49465726 ttttcataagctatactggagaacttatggaaataagcttaaaaaacctaatgaacatgtaataagctgttttcataagttctcc 49465642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 322
Target Start/End: Complemental strand, 29427690 - 29427619
Alignment:
Q  251 tggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaa 322  Q
    ||||||| |||  ||||||||||||||| |||| ||||| ||||||  || |||||||||||||||||||||    
T  29427690 tggagagattacggaaataagttgaaaatagcttatgaacatgtcattaggtgttttcataagttctcccaa 29427619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 318
Target Start/End: Complemental strand, 30573975 - 30573892
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctc 318  Q
    |||| |||||||||| ||||||||| ||  | ||||| ||||||||||| ||||| ||| || || ||||||||||||||||||    
T  30573975 ttttcataagctatcttggagagctgatgaacataagctgaaaacagcttatgaacatgccataatttgttttcataagttctc 30573892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 330
Target Start/End: Complemental strand, 54837095 - 54837000
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctc 330  Q
    |||| |||||||||| |||| |||||||| |||||||  |||||||  | ||||| |||||| ||| ||||||||||| |||| |||| |||||||    
T  54837095 ttttcataagctatcttggacagcttataaaaataagcggaaaacaagttatgaacatgtcataagctgttttcataaattcttccaaacagtctc 54837000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 315
Target Start/End: Original strand, 5391918 - 5391968
Alignment:
Q  265 aaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagtt 315  Q
    ||||||||||||||||||| ||||| |||||| ||| ||||||||||||||    
T  5391918 aaataagttgaaaacagcttatgaacatgtcataagctgttttcataagtt 5391968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 302
Target Start/End: Original strand, 25925764 - 25925818
Alignment:
Q  248 tcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagtt 302  Q
    |||||||||||||||  ||||||||||||||||||| ||||| |||||| |||||    
T  25925764 tcctggagagcttatgaaaataagttgaaaacagcttatgaacatgtcataagtt 25925818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 333
Target Start/End: Complemental strand, 34707525 - 34707459
Alignment:
Q  267 ataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||||||||||||| || ||| | |||||| |||||||||||| |||||||| ||| ||||||||||    
T  34707525 ataagttgaaaacaacttatggacatgtcacaagttgttttcaaaagttctctcaaacagtctcaca 34707459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 53762425 - 53762355
Alignment:
Q  265 aaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcacagg 335  Q
    ||||||||||||||||||| ||||| |||||| ||| |||||||| || ||||||| | |||||| |||||    
T  53762425 aaataagttgaaaacagcttatgaacatgtcataagctgttttcaaaatttctccctaacagtcttacagg 53762355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 288
Target Start/End: Complemental strand, 24887344 - 24887291
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatga 288  Q
    |||| ||||||||||||||||||||||| | |||||| ||||||||| ||||||    
T  24887344 ttttcataagctatcctggagagcttatgggaataagctgaaaacagttaatga 24887291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 333
Target Start/End: Complemental strand, 31365219 - 31365150
Alignment:
Q  265 aaataagttgaaaacagctaatgaaaat-gtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||| ||||||||| |||| |||||||| |||| ||| || |||||||||||||||||| ||||||||||    
T  31365219 aaatgagttgaaaaaagcttatgaaaattgtcataagctgctttcataagttctcccaaacagtctcaca 31365150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 40665438 - 40665499
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtca 296  Q
    |||| ||||| |||| ||||||||||||| ||||||| ||||||||||| ||||| ||||||    
T  40665438 ttttcataagttatcttggagagcttataaaaataagctgaaaacagcttatgaacatgtca 40665499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 312
Target Start/End: Complemental strand, 2175905 - 2175833
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataa 312  Q
    |||| ||| ||| ||||| ||||||||| ||||||||||||||| |  || |||||| |||||||||||||||    
T  2175905 ataaactacccttgagagtttatagaaacaagttgaaaacagcttacaaacatgtcataagttgttttcataa 2175833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 303
Target Start/End: Complemental strand, 33725935 - 33725867
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttg 303  Q
    |||| |||| |||||||||| |||||||||||||||| ||||||||||  || || |||||| ||||||    
T  33725935 tttttataaactatcctggaaagcttatagaaataagatgaaaacagcatatcaacatgtcataagttg 33725867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 333
Target Start/End: Original strand, 43046725 - 43046773
Alignment:
Q  285 atgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    ||||| || ||||||| ||||||||||||||||||||| ||||||||||    
T  43046725 atgaacatttcaaaagctgttttcataagttctcccaaacagtctcaca 43046773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 332
Target Start/End: Complemental strand, 45264397 - 45264329
Alignment:
Q  265 aaataagttgaaaacagctaatgaa-aatgtcaaaagttgttttcataagttctcccaagcagtctcac 332  Q
    ||||||| ||||||||||| ||||| |||| |  ||||||||||||||||||||| ||| |||||||||    
T  45264397 aaataaggtgaaaacagcttatgaacaatgccgtaagttgttttcataagttctctcaaccagtctcac 45264329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 274
Target Start/End: Complemental strand, 24158564 - 24158525
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttg 274  Q
    |||| ||||||||||||||||||||||| |||||||||||    
T  24158564 ttttcataagctatcctggagagcttatggaaataagttg 24158525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 243 - 318
Target Start/End: Original strand, 24281064 - 24281139
Alignment:
Q  243 agctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctc 318  Q
    ||||||| ||||||||||||  || ||||||||||||| || ||| | || ||| |||||||||||||||| ||||    
T  24281064 agctatcatggagagcttatgaaagtaagttgaaaacaacttatggagatatcataagttgttttcataagctctc 24281139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 318
Target Start/End: Original strand, 36887513 - 36887596
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctc 318  Q
    |||| |||||| ||| || ||| |||||  ||||||| |||||||| || ||||| |||||||||||| |||| ||||||||||    
T  36887513 ttttcataagccatcttgaagaacttatgaaaataagctgaaaacatcttatgaacatgtcaaaagttcttttgataagttctc 36887596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 333
Target Start/End: Original strand, 39980738 - 39980837
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaa-atgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||| |||||||||  |||||| |||||  |||||||||||||| |||| ||||||   |||| ||| |||||||||||||||||  || ||||||||||    
T  39980738 tttttataagctatattggagaacttatgaaaataagttgaaaaaagcttatgaaaccagtcataagctgttttcataagttctcttaaacagtctcaca 39980837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 283
Target Start/End: Complemental strand, 52323957 - 52323907
Alignment:
Q  235 ttttgataagctatcctggagagctta--tagaaataagttgaaaacagct 283  Q
    ||||||||||||||| |||||||||||  | ||||||||||||||||||||    
T  52323957 ttttgataagctatcttggagagcttatgtggaaataagttgaaaacagct 52323907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 330
Target Start/End: Original strand, 11253515 - 11253605
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctc 330  Q
    |||||||||||| |||||||||  |||||| | ||||||||| | ||  | |||||| |||||||||| |||| |||| |||| |||||||    
T  11253515 ataagctatcctagagagcttagggaaataggctgaaaacagtttatagatatgtcataagttgtttttataaattctgccaaacagtctc 11253605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 313
Target Start/End: Complemental strand, 22214720 - 22214642
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataag 313  Q
    |||| |||||||||||| ||||  |||  |||||||| ||||||||||| ||| | |||||||| ||| ||||||||||    
T  22214720 ttttcataagctatcctagagacattacggaaataagctgaaaacagcttatggacatgtcaaatgtttttttcataag 22214642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 310
Target Start/End: Original strand, 23793598 - 23793667
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcat 310  Q
    |||||||||| |||| |||||||||||||||| |||||||| || || ||  ||||| |||||||||||||    
T  23793598 ataagctatcttggaaagcttatagaaataagctgaaaacaacttat-aagttgtcataagttgttttcat 23793667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 334
Target Start/End: Complemental strand, 23808120 - 23808026
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcacag 334  Q
    |||||||||| ||||||| ||||  ||||||| ||||||||  |  |||| |||||| ||| || ||||||||||| |||||| | |||||||||    
T  23808120 ataagctatcttggagagtttatgaaaataagatgaaaacaatttgtgaacatgtcataagctgctttcataagttttcccaaaccgtctcacag 23808026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 306
Target Start/End: Original strand, 36200110 - 36200176
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttt 306  Q
    ||||||||||||| |||||| || |||||||| |||||||| || ||| | |||||| |||||||||    
T  36200110 ataagctatcctgtagagctcatggaaataagctgaaaacaacttatggacatgtcataagttgttt 36200176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 333
Target Start/End: Original strand, 43948664 - 43948761
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||| |||||||||| |||| |||||   |||||||| ||||||||||| |||   ||||||| || |||||||||| |||||||||  ||||||||||    
T  43948664 ttttcataagctatcttggaaagcttgaggaaataagctgaaaacagcttatg-ggatgtcaatagctgttttcatatgttctcccatacagtctcaca 43948761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 317
Target Start/End: Original strand, 45541580 - 45541662
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttct 317  Q
    |||| |||||||||| |||| | |||||   |||||  ||||||||||| ||||| |||||| ||| ||||||||||||||||    
T  45541580 ttttcataagctatcttggataacttatgagaataacctgaaaacagcttatgaacatgtcataagctgttttcataagttct 45541662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 322
Target Start/End: Complemental strand, 46778198 - 46778164
Alignment:
Q  288 aaaatgtcaaaagttgttttcataagttctcccaa 322  Q
    ||||||||| |||||||||||||||||||||||||    
T  46778198 aaaatgtcataagttgttttcataagttctcccaa 46778164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 20669181 - 20669242
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtca 296  Q
    |||| |||||||||| ||||||||||||  |||||||  |||||||||| ||||| ||||||    
T  20669181 ttttcataagctatcttggagagcttatgtaaataagcggaaaacagcttatgaacatgtca 20669242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 332
Target Start/End: Complemental strand, 40881009 - 40880912
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcac 332  Q
    |||| |||| ||||||| ||||  ||||| ||||||||| |||||| || | |   |||||| |||||||||||||||| |||| ||| |||||||||    
T  40881009 ttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 40880912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 315
Target Start/End: Original strand, 41724228 - 41724301
Alignment:
Q  243 agctatcctggagagcttata-gaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagtt 315  Q
    ||||||||| |||||||||||  ||||||| |||||||| || ||| | |||||| ||||||||| ||||||||    
T  41724228 agctatccttgagagcttatataaaataagctgaaaacaacttatggacatgtcataagttgtttccataagtt 41724301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 320
Target Start/End: Complemental strand, 48286871 - 48286786
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctccc 320  Q
    |||| ||||| |||| || |||||||||||||||||| ||| ||| | | ||| | |||||  | |||||||||||||||||||||    
T  48286871 ttttcataagttatcatgtagagcttatagaaataagctgataacggtttatggacatgtcgtaggttgttttcataagttctccc 48286786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 313
Target Start/End: Original strand, 50004682 - 50004739
Alignment:
Q  256 agcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataag 313  Q
    ||||||| |||||||| ||||||||||| | ||| |||||| ||||||||| ||||||    
T  50004682 agcttattgaaataagctgaaaacagcttaagaacatgtcataagttgtttccataag 50004739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 322
Target Start/End: Original strand, 901933 - 902021
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaat-gaaaatgtcaaaagttgttttcataagttctcccaa 322  Q
    |||| |||||||||  |||||| |||||  |||||||||||||| |||| || |||||||| |  || |||||||||||||| ||||||    
T  901933 tttttataagctatattggagaacttatgaaaataagttgaaaaaagcttatggaaaatgttattagctgttttcataagttttcccaa 902021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 313
Target Start/End: Complemental strand, 3015886 - 3015826
Alignment:
Q  253 gagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataag 313  Q
    ||||||||||  ||||||| |||||||| || ||| | |||||| ||||||||||||||||    
T  3015886 gagagcttattaaaataagatgaaaacatcttatggacatgtcataagttgttttcataag 3015826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 339
Target Start/End: Complemental strand, 25182992 - 25182944
Alignment:
Q  291 atgtcaaaagttgttttcataagttctcccaagcagtctcacaggttct 339  Q
    |||||| |||||||||||||||| |||| ||| |||||||||| |||||    
T  25182992 atgtcataagttgttttcataagctctctcaaacagtctcacaagttct 25182944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 283
Target Start/End: Complemental strand, 30923959 - 30923911
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagct 283  Q
    |||| |||| ||||||| ||||| ||||||||||||| |||||||||||    
T  30923959 ttttcataacctatcctagagagtttatagaaataagctgaaaacagct 30923911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 331
Target Start/End: Original strand, 46031004 - 46031096
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaa-aatgtcaaaagttgttttcataagttctcccaagcagtctca 331  Q
    |||| ||||| |||||| |||||  ||||||| ||||||||||| ||||| ||||||| | | ||||||| |||||||||  || ||||||||    
T  46031004 ataaactatcttggagaacttattaaaataagctgaaaacagcttatgaataatgtcataggctgttttcgtaagttctctgaaacagtctca 46031096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 318
Target Start/End: Original strand, 47132026 - 47132086
Alignment:
Q  258 cttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctc 318  Q
    |||||| ||||||| ||||||||| | ||| | ||| || |||||||||||||||||||||    
T  47132026 cttataaaaataagctgaaaacagtttatggatatgacataagttgttttcataagttctc 47132086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 48528565 - 48528609
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaac 279  Q
    |||| ||||||||| |||||||| ||||||||||||| |||||||    
T  48528565 ttttcataagctattctggagagtttatagaaataagctgaaaac 48528609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 6e-19; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 240 - 316
Target Start/End: Original strand, 35925704 - 35925780
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttc 316  Q
    |||||||||| ||||||| |||| |||||||||||||||||||| ||||| |||||| ||| |||||||||||||||    
T  35925704 ataagctatcatggagagtttatggaaataagttgaaaacagcttatgaacatgtcataagctgttttcataagttc 35925780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 235 - 314
Target Start/End: Complemental strand, 4699676 - 4699597
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagt 314  Q
    |||| |||| |||||| |||||||||||||||||||| | ||||||||| ||||| |||||| |||||||||||||||||    
T  4699676 ttttcataaactatcccggagagcttatagaaataagctaaaaacagcttatgaacatgtcataagttgttttcataagt 4699597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 251 - 333
Target Start/End: Complemental strand, 31517785 - 31517703
Alignment:
Q  251 tggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    ||||||||||||  ||||||| ||||||||||| ||||| ||||||  ||||||||| |||||||||||||| ||||||||||    
T  31517785 tggagagcttatgaaaataagctgaaaacagcttatgaacatgtcatgagttgttttgataagttctcccaaacagtctcaca 31517703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 235 - 333
Target Start/End: Original strand, 37811861 - 37811959
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||| |||||| ||| ||||||||| || |||||||||||||||||| | ||||| |||||| ||| ||||||||||||||||| ||| |||| |||||    
T  37811861 ttttcataagccatcatggagagctaatggaaataagttgaaaacagtttatgaacatgtcataagctgttttcataagttctctcaaccagtatcaca 37811959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 234 - 319
Target Start/End: Complemental strand, 7262580 - 7262495
Alignment:
Q  234 cttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcc 319  Q
    ||||| ||||||||||||| ||||||| | |||||||| ||||||||||| ||||| |||||||||| |||||| ||||| |||||    
T  7262580 cttttcataagctatcctgaagagcttgtggaaataaggtgaaaacagcttatgaacatgtcaaaagctgtttttataagctctcc 7262495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 333
Target Start/End: Complemental strand, 33723443 - 33723345
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||| |||||||| |||| | ||||||| |||||||| |||||||| || ||||| ||||||  || ||||| |||||||| |||||||||||||||||    
T  33723443 ttttcataagctaccctgtaaagcttatggaaataagctgaaaacatctcatgaacatgtcatgagctgtttccataagttttcccaagcagtctcaca 33723345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 240 - 333
Target Start/End: Complemental strand, 32515497 - 32515404
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||||||||| ||||||||||||||| |||||||||||||| || ||  | |||||| | | ||||| |||||| |||||||| ||||||||||    
T  32515497 ataagctatcatggagagcttatagatataagttgaaaacaacttattgacatgtcatacgctgtttccataagctctcccaaacagtctcaca 32515404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 265 - 333
Target Start/End: Original strand, 2295135 - 2295204
Alignment:
Q  265 aaataagttgaaaacagctaatgaaaat-gtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||||||||||| | |||| |||||||| |||| ||| ||||||||||||||||||||| ||||||||||    
T  2295135 aaataagttgaatagagcttatgaaaattgtcataagctgttttcataagttctcccaaacagtctcaca 2295204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 30257692 - 30257753
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtca 296  Q
    |||| |||| ||||||||||| ||||||||||||||| ||||||||||| ||||| ||||||    
T  30257692 ttttcataaactatcctggagggcttatagaaataagctgaaaacagcttatgaacatgtca 30257753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 329
Target Start/End: Complemental strand, 37593740 - 37593651
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtct 329  Q
    |||||||||  || |||||||||  ||||||| ||||||||||| ||||| |||||| ||||||| ||||| |||| |||||| ||||||    
T  37593740 ataagctattttgaagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagttgtgttcattagttttcccaaacagtct 37593651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 273 - 333
Target Start/End: Complemental strand, 38170713 - 38170653
Alignment:
Q  273 tgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||||||| || ||||| |||||| ||| |||||||||||| |||||||||||||||||||    
T  38170713 tgaaaacaacttatgaacatgtcataagctgttttcataagctctcccaagcagtctcaca 38170653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 334
Target Start/End: Complemental strand, 51929584 - 51929500
Alignment:
Q  251 tggagagcttatagaaataagttgaaaacagctaatgaaaa-tgtcaaaagttgttttcataagttctcccaagcagtctcacag 334  Q
    |||||| ||||| ||||||||||||||| |||| ||||||| ||||| ||| ||||||||| | ||||||||| || ||||||||    
T  51929584 tggagaacttatggaaataagttgaaaaaagcttatgaaaattgtcataagctgttttcatgaattctcccaaacaatctcacag 51929500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 322
Target Start/End: Complemental strand, 3052767 - 3052680
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaa 322  Q
    |||| |||||||| | |||||||||||| |||| ||| |||| | |||| ||||| |||||||||||| ||| |||||| ||||||||    
T  3052767 ttttcataagctagcatggagagcttattgaaagaagctgaatatagcttatgaacatgtcaaaagttttttccataagctctcccaa 3052680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 333
Target Start/End: Complemental strand, 3234076 - 3233977
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaa-tgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||| |||||||||  |||||| |||||  |||||||| ||||| | || ||||||| ||| | ||||||||||||||||||||||| | ||||||||||    
T  3234076 tttttataagctatattggagaacttatgaaaataagtagaaaaaaacttatgaaaactgttataagttgttttcataagttctccctaacagtctcaca 3233977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 322
Target Start/End: Original strand, 10744310 - 10744397
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaa 322  Q
    |||| ||||||| || | |||| |||||| ||||||| ||||||||||| ||||| ||| || ||| |||||||| ||||||||||||    
T  10744310 ttttcataagctgtcttagagaacttataaaaataagatgaaaacagcttatgaacatgccataagctgttttcacaagttctcccaa 10744397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 318
Target Start/End: Complemental strand, 24460468 - 24460385
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctc 318  Q
    |||| |||||||||||| ||||||||| | ||||||| || |||||||| ||||| |||||| ||| | ||||||||| |||||    
T  24460468 ttttcataagctatccttgagagcttacaaaaataagctggaaacagcttatgaacatgtcataagctattttcataatttctc 24460385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 333
Target Start/End: Complemental strand, 24915112 - 24915013
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaa-tgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||| ||||||| || |||||| ||| |  |||||||||||||| |||| ||||||| ||||| ||||||||||||||| || |||||| ||| ||||||    
T  24915112 ttttcataagctgtcttggagaacttgtgaaaataagttgaaaaaagcttatgaaaaatgtcataagttgttttcataaattgtcccaaacagcctcaca 24915013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 333
Target Start/End: Original strand, 49938756 - 49938855
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaat-gtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||| |||||||||  | |||| |||||  |||||||||||||| ||||  ||||||| |||| ||| ||||||||||||||||||||| || |||||||    
T  49938756 tttttataagctatattagagaacttatgaaaataagttgaaaaaagcttttgaaaattgtcataagctgttttcataagttctcccaaacaatctcaca 49938855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 333
Target Start/End: Original strand, 2777917 - 2777999
Alignment:
Q  251 tggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||||| |||||  ||||||| ||||||| ||| ||||| | |||| |||||| ||||||||||||||| || ||||||||||    
T  2777917 tggagaacttatgaaaataagctgaaaacggcttatgaatacgtcataagttggtttcataagttctcctaaacagtctcaca 2777999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 333
Target Start/End: Original strand, 4445733 - 4445815
Alignment:
Q  251 tggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||||||||| |  |||||||||||||||||||  |||| |||| | ||| || |||||||| ||||||||| ||||||||||    
T  4445733 tggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcaca 4445815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 6262045 - 6262107
Alignment:
Q  251 tggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataag 313  Q
    |||||||||| | ||||||||||||||| |||| ||||| |||||| |||||||| |||||||    
T  6262045 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttctcataag 6262107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 313
Target Start/End: Original strand, 17269259 - 17269337
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataag 313  Q
    |||| ||||||||||||||||||||||  | |||||||| |||||| || ||||| |||||| ||| | ||||||||||    
T  17269259 ttttcataagctatcctggagagcttacggtaataagttaaaaacaactcatgaacatgtcataaggtattttcataag 17269337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 333
Target Start/End: Complemental strand, 23373373 - 23373276
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||| ||||||||||||| |||||||| ||||||||| ||||||||| |  || | |||||| |||||||||  ||||| |||||||| || |||||||    
T  23373373 ttttcataagctatcctgaagagcttacagaaataagctgaaaacagat-gtggacatgtcataagttgtttctataagctctcccaaacaatctcaca 23373276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 313
Target Start/End: Original strand, 25479590 - 25479668
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataag 313  Q
    |||| |||||||||||| ||||||||||  ||||||| |||||||| |||||||| |||||| ||  | ||||||||||    
T  25479590 ttttcataagctatcctagagagcttatgaaaataagctgaaaacaactaatgaacatgtcataatctattttcataag 25479668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 317
Target Start/End: Complemental strand, 37842416 - 37842334
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttct 317  Q
    |||| |||||||||| || ||| |||||| ||||||| ||||||| ||| ||||| ||||||  || ||||||||||||||||    
T  37842416 ttttcataagctatcttgaagaacttataaaaataagctgaaaactgcttatgaacatgtcattagatgttttcataagttct 37842334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 319
Target Start/End: Complemental strand, 38247104 - 38247030
Alignment:
Q  245 ctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcc 319  Q
    ||||| ||||||||||||| || ||||||||||||| || |||||  ||| | |||| |||||||||||||||||    
T  38247104 ctatcgtggagagcttataaaagtaagttgaaaacaacttatgaacgtgtaataagtggttttcataagttctcc 38247030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 15942798 - 15942725
Alignment:
Q  246 tatcctggagagcttatagaaataagttgaaaaca-gctaatgaaaatgtcaaaagttgttttcataagttctc 318  Q
    |||| |||||| ||||| |||||||| |||||||| ||| ||||| |||||| ||||||||||||||| |||||    
T  15942798 tatcttggagaacttattgaaataagctgaaaacatgcttatgaacatgtcataagttgttttcataaattctc 15942725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 320
Target Start/End: Complemental strand, 39270486 - 39270401
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctccc 320  Q
    |||| |||||||| | | |||||| |||  ||||||||||||||||||| ||| | ||| |||||| |||||||||||| ||||||    
T  39270486 ttttcataagctaccatagagagcatatgaaaataagttgaaaacagcttatggacatgccaaaagctgttttcataagctctccc 39270401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 331
Target Start/End: Complemental strand, 7218135 - 7218039
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctca 331  Q
    |||| |||| |||||||||||| |||||  |||||||||||||||||||  ||||  ||||| |||| ||||||| ||| || ||||| || |||||    
T  7218135 ttttcataacctatcctggagaacttatgaaaataagttgaaaacagcttgtgaacgtgtcataagtcgttttcacaagctcccccaaacaatctca 7218039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 333
Target Start/End: Original strand, 10439705 - 10439793
Alignment:
Q  245 ctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    ||||||||||||| |||| |||||||| ||||| ||| | ||| | |||||| |  ||||||||||||| ||||||||  |||||||||    
T  10439705 ctatcctggagagtttatggaaataagctgaaagcagattatggacatgtcatagtttgttttcataagctctcccaaatagtctcaca 10439793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 315
Target Start/End: Original strand, 31118052 - 31118132
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagtt 315  Q
    |||| |||||||| ||||  || ||||| |||||||| |||||||| || ||||| |||||| ||| ||||||||||||||    
T  31118052 ttttcataagctaccctgatgaacttatggaaataagctgaaaacaactgatgaacatgtcataagatgttttcataagtt 31118132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 333
Target Start/End: Original strand, 38001643 - 38001703
Alignment:
Q  273 tgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||||||| || ||||| | |||| ||| ||||||||||||||||||||| ||||||||||    
T  38001643 tgaaaacaacttatgaacaggtcataagctgttttcataagttctcccaaacagtctcaca 38001703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 331
Target Start/End: Original strand, 44422708 - 44422804
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctca 331  Q
    |||| |||||||||||||||||||||||  ||||||| || |  ||||| ||| | |||||| ||| | |||||||||| |||||||  ||||||||    
T  44422708 tttttataagctatcctggagagcttatgaaaataagctgtagtcagcttatggacatgtcataagctattttcataagctctcccagacagtctca 44422804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 252 - 322
Target Start/End: Complemental strand, 3887676 - 3887605
Alignment:
Q  252 ggagagcttatagaaataagttgaaaacagctaatgaa-aatgtcaaaagttgttttcataagttctcccaa 322  Q
    ||||| |||||  ||||||||| ||||||||| ||||| ||||||| ||| |||||||||||||||| ||||    
T  3887676 ggagaacttatgaaaataagttaaaaacagcttatgaacaatgtcataagatgttttcataagttcttccaa 3887605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 278
Target Start/End: Original strand, 5150946 - 5150989
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaa 278  Q
    |||| |||||||||| || |||||||||||||||||||||||||    
T  5150946 ttttcataagctatcatgaagagcttatagaaataagttgaaaa 5150989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 322
Target Start/End: Complemental strand, 10199469 - 10199382
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaa 322  Q
    |||| |||||||||  | ||||||||||  ||||||| |||||||| || ||||| |||||| ||| | ||||||| |||||||||||    
T  10199469 ttttcataagctattttagagagcttatgaaaataagctgaaaacaacttatgaacatgtcataagctattttcatgagttctcccaa 10199382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 278
Target Start/End: Original strand, 35017585 - 35017628
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaa 278  Q
    |||| ||||||| ||||||||||||||| |||||||||||||||    
T  35017585 ttttcataagctgtcctggagagcttatggaaataagttgaaaa 35017628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 333
Target Start/End: Complemental strand, 50644252 - 50644217
Alignment:
Q  298 aagttgttttcataagttctcccaagcagtctcaca 333  Q
    ||||||||||||||||||||||||| ||||||||||    
T  50644252 aagttgttttcataagttctcccaaacagtctcaca 50644217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 327
Target Start/End: Original strand, 4481969 - 4482031
Alignment:
Q  265 aaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagt 327  Q
    ||||||| | ||||||||| ||||| |||| | ||||||||||||||||||||| ||| ||||    
T  4481969 aaataagctaaaaacagcttatgaacatgtaataagttgttttcataagttctctcaaacagt 4482031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 327
Target Start/End: Original strand, 5741666 - 5741708
Alignment:
Q  285 atgaaaatgtcaaaagttgttttcataagttctcccaagcagt 327  Q
    |||||| ||||| ||||||||||||||||||||||||| ||||    
T  5741666 atgaaattgtcataagttgttttcataagttctcccaaacagt 5741708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 333
Target Start/End: Complemental strand, 27146283 - 27146217
Alignment:
Q  268 taagttgaaaacagctaatgaa-aatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||||||||||||||| ||||| ||||||| ||||||||| | |||||||| ||||  |||||||||    
T  27146283 taagttgaaaacagcttatgaacaatgtcataagttgtttccttaagttcttccaacaagtctcaca 27146217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 280
Target Start/End: Complemental strand, 30259540 - 30259502
Alignment:
Q  242 aagctatcctggagagcttatagaaataagttgaaaaca 280  Q
    |||||||| |||||||||||| |||||||||||||||||    
T  30259540 aagctatcatggagagcttatggaaataagttgaaaaca 30259502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 322
Target Start/End: Original strand, 37473418 - 37473500
Alignment:
Q  241 taagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaa-tgtcaaaagttgttttcataagttctcccaa 322  Q
    |||| |||| |||||| |||||  ||||||| || ||| |||| ||||||| ||||| |||||||||||| ||||||||||||    
T  37473418 taagttatcttggagaacttatgaaaataagctggaaaaagcttatgaaaaatgtcataagttgttttcaaaagttctcccaa 37473500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 312
Target Start/End: Complemental strand, 38266502 - 38266444
Alignment:
Q  254 agagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataa 312  Q
    |||||||||||||||||||||||||||  | ||||| |||||  ||||| |||||||||    
T  38266502 agagcttatagaaataagttgaaaacaaattatgaacatgtcgtaagttattttcataa 38266444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 40943283 - 40943229
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgt 294  Q
    |||||||||  |||||||||| |||||||||||||||||||| | ||||| ||||    
T  40943283 ataagctattttggagagcttgtagaaataagttgaaaacagtttatgaacatgt 40943229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 333
Target Start/End: Original strand, 43420267 - 43420365
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||| ||||||||||  | |||| || | |||||||||||||| | | | ||||| |||||| ||| ||||| |||||| |||| ||||||||||||||    
T  43420267 ttttcataagctatctggaagagattttggaaataagttgaaagcggattatgaacatgtcataagctgtttccataagatctcacaagcagtctcaca 43420365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 333
Target Start/End: Original strand, 11941301 - 11941370
Alignment:
Q  265 aaataagttgaaaacagctaatgaa-aatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    ||||||| ||||||||||| ||||| ||||| | ||| | |||||||||| |||||||| ||||||||||    
T  11941301 aaataagctgaaaacagcttatgaacaatgttataagctattttcataagctctcccaaacagtctcaca 11941370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 333
Target Start/End: Complemental strand, 12287223 - 12287154
Alignment:
Q  265 aaataagttgaaaacagctaatgaaaatgtcaaaagt-tgttttcataagttctcccaagcagtctcaca 333  Q
    ||||||| |||||||| || ||||||||| || |||  | |||||| |||||||||||||||||||||||    
T  12287223 aaataagctgaaaacaacttatgaaaatgccataagactattttcacaagttctcccaagcagtctcaca 12287154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 333
Target Start/End: Original strand, 14332024 - 14332089
Alignment:
Q  268 taagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||| |||||| |||||| |||| ||||| || |||||||||||||||| ||| | ||||||||||    
T  14332024 taagctgaaaaaagctaacgaaagtgtcataatttgttttcataagttcacccgaacagtctcaca 14332089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 317
Target Start/End: Complemental strand, 33108666 - 33108601
Alignment:
Q  252 ggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttct 317  Q
    ||||||||||| ||||||||||||||||| || |||   ||| ||  |||||||||||||||||||    
T  33108666 ggagagcttatggaaataagttgaaaacaacttatggtcatggcatgagttgttttcataagttct 33108601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 289
Target Start/End: Complemental strand, 35590948 - 35590899
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaa 289  Q
    |||||||||| |||||||||||| |||||||| |||||||| || |||||    
T  35590948 ataagctatcatggagagcttatggaaataagctgaaaacaactgatgaa 35590899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 277
Target Start/End: Original strand, 39596611 - 39596648
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaa 277  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  39596611 ataagctatcttggagagcttataaaaataagttgaaa 39596648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 315
Target Start/End: Original strand, 3924633 - 3924713
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagtt 315  Q
    |||| ||||||||||||| |||| |||| ||||||||  ||||||| || || || || ||| || |||||||||||||||    
T  3924633 tttttataagctatcctgaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagtt 3924713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 6292518 - 6292574
Alignment:
Q  251 tggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgtttt 307  Q
    ||||||||||||  ||||||| ||||||||||| ||||| |||||| ||| ||||||    
T  6292518 tggagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagctgtttt 6292574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 17778966 - 17779050
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcc 319  Q
    |||| |||||||||| ||||||  || | |||||||| ||||||||| | ||||| | || | |||||||||| |||||||||||    
T  17778966 ttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgttataagttgtttttataagttctcc 17779050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 306
Target Start/End: Original strand, 26184768 - 26184828
Alignment:
Q  246 tatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttt 306  Q
    ||||||||||||||||| |||||||  ||||||||||| ||| | |||||| ||| |||||    
T  26184768 tatcctggagagcttatggaaataatctgaaaacagcttatggacatgtcataagctgttt 26184828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 271
Target Start/End: Complemental strand, 38651492 - 38651456
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataag 271  Q
    |||| |||||||||||||||||||||||| |||||||    
T  38651492 ttttcataagctatcctggagagcttataaaaataag 38651456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 333
Target Start/End: Complemental strand, 42757200 - 42757140
Alignment:
Q  273 tgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    ||||||||||| ||||| |||| | ||||||||||| |||||||| |||| |||| |||||    
T  42757200 tgaaaacagcttatgaatatgtaataagttgttttcgtaagttcttccaaacagtgtcaca 42757140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 322
Target Start/End: Original strand, 45394123 - 45394211
Alignment:
Q  234 cttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaa 322  Q
    ||||| ||||| ||||||| | || |||| |||||||||||||||||||| ||  | || ||| ||| ||||||| |||||||| ||||    
T  45394123 cttttcataagttatcctgtaaagtttattgaaataagttgaaaacagcttatcgacatctcataagctgttttcttaagttcttccaa 45394211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 304
Target Start/End: Complemental strand, 46252738 - 46252674
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgt 304  Q
    |||||||||| ||||||||||||  ||||||  |||||||| || ||||| |||||| |||||||    
T  46252738 ataagctatcttggagagcttatgaaaataacctgaaaacaacttatgaacatgtcataagttgt 46252674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 235 - 322
Target Start/End: Original strand, 28933833 - 28933919
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaa 322  Q
    |||| |||||||||||| ||||||| ||||||||||||||||||||||| ||||| ||| || |||||||||||||||| ||| ||||    
T  28933833 ttttcataagctatcctagagagctgatagaaataagttgaaaacagct-atgaacatgccataagttgttttcataagctcttccaa 28933919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 251 - 329
Target Start/End: Complemental strand, 28677704 - 28677626
Alignment:
Q  251 tggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtct 329  Q
    |||||||||||| ||||||||  ||||||| || |||||||||||| ||| ||||||||||||||||||||| ||||||    
T  28677704 tggagagcttatggaaataagccgaaaacaacttatgaaaatgtcataagctgttttcataagttctcccaaacagtct 28677626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 241 - 322
Target Start/End: Original strand, 15120198 - 15120279
Alignment:
Q  241 taagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaa 322  Q
    ||||||||| ||||||||||||  ||||||| | ||||||||||||||| |||||| ||||||||| |||||| ||||||||    
T  15120198 taagctatcatggagagcttatcaaaataagcttaaaacagctaatgaacatgtcataagttgtttccataagctctcccaa 15120279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 306
Target Start/End: Complemental strand, 34652097 - 34652026
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttt 306  Q
    |||| |||||||||| |||||||||||| |||||||||||||||||||| ||| | |||||| |||||||||    
T  34652097 ttttcataagctatcttggagagcttatggaaataagttgaaaacagcttatggacatgtcataagttgttt 34652026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 305
Target Start/End: Complemental strand, 1939393 - 1939323
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgtt 305  Q
    |||| ||||||||| ||||||||||||| |||||||||||||||||||| ||| | |||||| ||||||||    
T  1939393 ttttcataagctatactggagagcttatggaaataagttgaaaacagcttatggacatgtcataagttgtt 1939323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 334
Target Start/End: Original strand, 16451157 - 16451227
Alignment:
Q  265 aaataagttgaaaacagctaatgaa-aatgtcaaaagttgttttcataagttctcccaagcagtctcacag 334  Q
    ||||||| ||||||||||| ||||| ||||||| ||||||||||||||||||||||||| | |||||||||    
T  16451157 aaataagctgaaaacagctcatgaacaatgtcataagttgttttcataagttctcccaaacggtctcacag 16451227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 240 - 317
Target Start/End: Original strand, 33192216 - 33192293
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttct 317  Q
    |||||||||||||||||||||||| | ||||| ||||||||||| ||| | |||||| ||  ||||||||||||||||    
T  33192216 ataagctatcctggagagcttataaatataagctgaaaacagcttatggatatgtcataaactgttttcataagttct 33192293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 339
Target Start/End: Original strand, 35485926 - 35486030
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcacag 334  Q
    |||| ||||||||||||| ||||| ||| ||||| || ||||||||||| ||||| || ||| |||||| |||  ||||||||| ||| ||||||||||     
T  35485926 tttttataagctatcctgaagagcctatggaaatgagctgaaaacagcttatgaacatatcataagttgctttagtaagttctctcaaacagtctcacaa 35486025  T
Q  335 gttct 339  Q
    |||||    
T  35486026 gttct 35486030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 339
Target Start/End: Original strand, 40158727 - 40158831
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcacag 334  Q
    |||| ||||| ||| |||||||||||||  || |||| |||||||| || || || |||||| ||| ||||||||||||||| ||||| ||||||||||     
T  40158727 ttttcataagttattctggagagcttatgtaattaagctgaaaacaacttataaacatgtcataagctgttttcataagttcccccaatcagtctcacaa 40158826  T
Q  335 gttct 339  Q
    |||||    
T  40158827 gttct 40158831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 333
Target Start/End: Complemental strand, 41293224 - 41293125
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatga-aaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||||||||||||||||||||  |||||  | ||||| ||||||||||| |||  |||||||| ||| |||||| ||||||||||||||  |||||||||    
T  41293224 ttttgataagctatcctggagtacttatgaatataagctgaaaacagcttatgcgaaatgtcataagctgtttttataagttctcccaaatagtctcaca 41293125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 333
Target Start/End: Original strand, 4606939 - 4607033
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaa-aatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||||||||| |||||| |||||  ||||||| | ||| ||||| ||||| ||||||| |||||||||||| ||||||||||||  |||||||||    
T  4606939 ataagctatcttggagaacttatgaaaataagctaaaagcagctcatgaacaatgtcataagttgttttcacaagttctcccaaatagtctcaca 4607033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 248 - 322
Target Start/End: Original strand, 38809348 - 38809422
Alignment:
Q  248 tcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaa 322  Q
    ||||||||||||||| |||||||||||||||||| | || || |||||| ||| || ||| ||||||||||||||    
T  38809348 tcctggagagcttatggaaataagttgaaaacagattattaacatgtcataagctggtttaataagttctcccaa 38809422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 317
Target Start/End: Original strand, 1647250 - 1647327
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttct 317  Q
    |||||||||  | |||||||||| |||||||| ||||||||||| ||||  |||||| ||| ||||||||||||||||    
T  1647250 ataagctattatagagagcttatggaaataagctgaaaacagcttatgagcatgtcataagctgttttcataagttct 1647327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 333
Target Start/End: Complemental strand, 12313229 - 12313136
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||||||||| ||||||||||||  ||||||| ||||| || || ||||| ||| || ||| ||||||||||| ||||||||| || |||||||    
T  12313229 ataagctatcttggagagcttatgaaaataaggtgaaatcaacttatgaacatggcataagctgttttcataaattctcccaaacaatctcaca 12313136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 331
Target Start/End: Original strand, 40279416 - 40279512
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaat-gaaaatgtcaaaagttgttttcataagttctcccaagcagtctca 331  Q
    |||| |||||||||  |||||| |||||  ||||||||||||||||| | || || ||||| ||||||||||||||| ||||||||||| ||||||||    
T  40279416 ttttcataagctatattggagaacttatgaaaataagttgaaaacagtttatggacaatgttaaaagttgttttcat-agttctcccaaacagtctca 40279512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 333
Target Start/End: Complemental strand, 43530143 - 43530074
Alignment:
Q  264 gaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    ||||||||||||||| ||||  |||| |||||| ||  |||||||||||||||||||||||| |||||||    
T  43530143 gaaataagttgaaaatagcttgtgaacatgtcataatctgttttcataagttctcccaagcactctcaca 43530074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 315
Target Start/End: Original strand, 33941918 - 33941998
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagtt 315  Q
    |||| |||||||||| ||||||| ||||   |||||||||||| ||||| |||||  ||||| ||||||||||||||||||    
T  33941918 ttttcataagctatcttggagagtttatgataataagttgaaagcagcttatgaacttgtcataagttgttttcataagtt 33941998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 41817177 - 41817261
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcc 319  Q
    |||| |||| |||||||||||||||||| |||||||| ||||||||  | || || |||||| ||| ||||||||||| ||||||    
T  41817177 ttttcataaactatcctggagagcttatggaaataagctgaaaacaaattatcaacatgtcataagatgttttcataaattctcc 41817261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 323
Target Start/End: Complemental strand, 43065511 - 43065423
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaag 323  Q
    |||| ||||| |||| |||||||||||| |||||||| ||||||||  | ||| | |||||| |||||||||||||||| |||| ||||    
T  43065511 ttttcataagttatcgtggagagcttattgaaataagctgaaaacaatttatggacatgtcataagttgttttcataagctctcacaag 43065423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 322
Target Start/End: Original strand, 45229520 - 45229608
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatg-aaaatgtcaaaagttgttttcataagttctcccaa 322  Q
    |||| |||||||||| | |||| |||||  ||||||| |||||| |||||||| ||||||||| ||| | |||||||||||||||||||    
T  45229520 ttttcataagctatcttcgagaacttatgaaaataagctgaaaaaagctaatgaaaaatgtcataaggtcttttcataagttctcccaa 45229608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 2142693 - 2142760
Alignment:
Q  265 aaataagttgaaaacagctaatgaaaat-gtcaaaagttgttttcataagttctcccaagcagtctca 331  Q
    ||||||| | ||||||||||||||| || |||| || |||||||||||||||||||||| ||||||||    
T  2142693 aaataagctaaaaacagctaatgaacattgtcacaacttgttttcataagttctcccaaacagtctca 2142760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 333
Target Start/End: Complemental strand, 5902599 - 5902512
Alignment:
Q  246 tatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||| |||||| | |||| ||| ||| ||||||||| | ||||| |||||| ||| |||||||||||||||| |||| ||||||||||    
T  5902599 tatcttggagaacatataaaaacaagctgaaaacagtttatgaacatgtcataagctgttttcataagttcttccaaacagtctcaca 5902512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 306
Target Start/End: Original strand, 32821818 - 32821889
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttt 306  Q
    |||| ||||||||||||  |||||||||||||||||  ||||||||||| ||| | |||||| |||||||||    
T  32821818 ttttcataagctatcctaaagagcttatagaaataaactgaaaacagcttatggacatgtcataagttgttt 32821889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 296
Target Start/End: Original strand, 16867755 - 16867809
Alignment:
Q  242 aagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtca 296  Q
    |||||||| |||||||||||| ||||||||||||||||| || ||||| ||||||    
T  16867755 aagctatcttggagagcttatggaaataagttgaaaacaacttatgaatatgtca 16867809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 313
Target Start/End: Original strand, 10285874 - 10285947
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataag 313  Q
    |||||||| | | |||| ||||| |||||||||||||||||||| ||| | |||||| ||||| ||||||||||    
T  10285874 ataagctaacatagagaacttatggaaataagttgaaaacagcttatggacatgtcataagttattttcataag 10285947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 332
Target Start/End: Complemental strand, 41812124 - 41812055
Alignment:
Q  264 gaaataagttgaaaacagctaatgaaaa-tgtcaaaagttgttttcataagttctcccaagcagtctcac 332  Q
    ||||||||||||||| |||| ||||||| ||||| ||| |||||||| |||||||||||| ||| |||||    
T  41812124 gaaataagttgaaaaaagcttatgaaaaatgtcataagctgttttcaaaagttctcccaaacagcctcac 41812055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 331
Target Start/End: Complemental strand, 1742093 - 1741997
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctca 331  Q
    |||| |||| ||||| || |||| |||| ||||||||||||| | |||| ||| | |||||| ||||||||| |||||| ||||||||  |||||||    
T  1742093 ttttcataatctatcatgaagagtttatggaaataagttgaagatagcttatgcacatgtcataagttgtttccataagctctcccaaatagtctca 1741997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 330
Target Start/End: Complemental strand, 8820334 - 8820258
Alignment:
Q  254 agagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctc 330  Q
    ||||||||| |||||||| |||||||||||  |||| |||||| ||| ||||| |||||| ||||  ||||||||||    
T  8820334 agagcttatggaaataagctgaaaacagcttgtgaacatgtcagaagctgtttccataaggtctcttaagcagtctc 8820258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 319
Target Start/End: Complemental strand, 35379077 - 35378993
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcc 319  Q
    |||| |||||||||| ||||||||||||  ||||||| |||||||| || ||||| | ||||  || |||||||||||| |||||    
T  35379077 ttttcataagctatcttggagagcttatgaaaataagctgaaaacaacttatgaacaagtcatcagctgttttcataagctctcc 35378993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 333
Target Start/End: Complemental strand, 38077128 - 38077036
Alignment:
Q  241 taagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||||||||  |||||||||||||||||| | |||||||  || ||| |||||||  |||||||||| | |||||||| ||| || |||||||    
T  38077128 taagctatcacggagagcttatagaaataggctgaaaacctcttatggaaatgtcgtaagttgttttaagaagttctctcaaacaatctcaca 38077036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 322
Target Start/End: Original strand, 9556248 - 9556335
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaa 322  Q
    |||| |||||||||||| || |||||||  ||||||||||||| |  || ||| | ||||||  ||||||||||||||| ||||||||    
T  9556248 ttttcataagctatcctagaaagcttatgaaaataagttgaaatctacttatggacatgtcattagttgttttcataagctctcccaa 9556335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 331
Target Start/End: Complemental strand, 32106855 - 32106764
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctca 331  Q
    ||||| ||||||| |||||||||  | |||| |||||||||||| |   | |||||| ||| ||||||||||||||||| ||| ||||||||    
T  32106855 ataagttatcctgaagagcttatgaacataatttgaaaacagcttacagatatgtcataagctgttttcataagttctcacaaacagtctca 32106764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 246 - 333
Target Start/End: Complemental strand, 41042072 - 41041985
Alignment:
Q  246 tatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||| ||||||| |||| |||||||||||||||||||| ||| | |||| | |||||||||  |||| |||||  || ||||||||||    
T  41042072 tatcttggagagtttatggaaataagttgaaaacagctgatggacatgtaataagttgtttctataaattctctgaaacagtctcaca 41041985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 331
Target Start/End: Complemental strand, 44438895 - 44438804
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctca 331  Q
    ||||| ||||||||||| ||| | |||||||| ||||||||| | ||||| |||||| ||| |||||||| | |||| ||||  ||||||||    
T  44438895 ataagttatcctggagatcttgtggaaataagctgaaaacaggttatgaacatgtcataagctgttttcacatgttcccccagacagtctca 44438804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 333
Target Start/End: Original strand, 787373 - 787439
Alignment:
Q  267 ataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    ||||| ||||||||||| ||| | |||||| ||| ||||||||||||||||| ||| |||| |||||    
T  787373 ataagctgaaaacagcttatggacatgtcataagctgttttcataagttctcacaaacagtgtcaca 787439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 333
Target Start/End: Complemental strand, 8187514 - 8187416
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||| |||||||| | ||||||| |||| |||||||  |||||||| ||   |||||| ||| ||||||| ||||||||||||  ||| ||||||||||    
T  8187514 ttttcataagctaccatggagagattatggaaataacctgaaaacaacttgcgaaaatttcataagttgtattcataagttctttcaaacagtctcaca 8187416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 334
Target Start/End: Original strand, 11863964 - 11864010
Alignment:
Q  288 aaaatgtcaaaagttgttttcataagttctcccaagcagtctcacag 334  Q
    ||||||||| |||||||||||| | |||||||||| |||||||||||    
T  11863964 aaaatgtcataagttgttttcaaatgttctcccaaacagtctcacag 11864010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 322
Target Start/End: Original strand, 29430772 - 29430854
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaa 322  Q
    ||||||||||  ||| |||||||||| ||||| | ||| ||||||||| | |||||| ||| | |||||||||||||| ||||    
T  29430772 ataagctatctaggatagcttatagagataagcttaaagcagctaatggacatgtcataagctattttcataagttcttccaa 29430854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 36114433 - 36114523
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaa-aatgtcaaaagttgttttcataagttctcccaagcagtct 329  Q
    |||||||||| |||||| |||||| ||||||| | |||||||||  |||| ||| |||  ||||||||| | |||||||||||| ||||||    
T  36114433 ataagctatcttggagatcttataaaaataagctaaaaacagcttttgaacaatttcattagttgttttaacaagttctcccaaacagtct 36114523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 330
Target Start/End: Complemental strand, 40837496 - 40837399
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaat--gtcaaaagttgttttcataagttctcccaagcagtctc 330  Q
    |||| |||||||||| || ||||||||| |||||||| |||||| |||||  || |||  |||| ||| |||||||||||  |||||||| |||||||    
T  40837496 ttttaataagctatcatgtagagcttatggaaataagctgaaaatagctatggacaatatgtcataagatgttttcataaactctcccaaacagtctc 40837399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 318
Target Start/End: Complemental strand, 42420250 - 42420200
Alignment:
Q  269 aagttgaaaacagctaatgaaaa-tgtcaaaagttgttttcataagttctc 318  Q
    |||||||||| |||||||||||| ||||| ||||||||||| |||||||||    
T  42420250 aagttgaaaaaagctaatgaaaattgtcataagttgttttcgtaagttctc 42420200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 281
Target Start/End: Original strand, 43205318 - 43205364
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacag 281  Q
    |||| ||||||||||  ||||||||||| ||||||||||||||||||    
T  43205318 ttttcataagctatcacggagagcttatggaaataagttgaaaacag 43205364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 333
Target Start/End: Complemental strand, 43279590 - 43279489
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaa-tgtcaaaagttgttttcataagt--tctcccaagcagtctca 331  Q
    |||| |||||||||  |||||| ||| |  |||||||||||||| |||| ||||||| ||||| ||| ||||||||||| |  |||||||| ||||||||    
T  43279590 tttttataagctatattggagaacttgtgaaaataagttgaaaaaagcttatgaaaattgtcataagctgttttcataaattctctcccaaacagtctca 43279491  T
Q  332 ca 333  Q
    ||    
T  43279490 ca 43279489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 333
Target Start/End: Complemental strand, 14316181 - 14316108
Alignment:
Q  260 tatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||||||||||| ||||||||||| ||  | |||||| ||||||||| |||||| ||||| ||  |||||||||    
T  14316181 tatagaaataagctgaaaacagcttatacatatgtcataagttgtttccataagctctccaaaatagtctcaca 14316108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 333
Target Start/End: Complemental strand, 15757689 - 15757620
Alignment:
Q  265 aaataagttgaaaacagctaatgaaaat-gtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    ||||||| |||||| ||||  ||||||| |||| |||  |||||||||| ||||||||||||||||||||    
T  15757689 aaataagctgaaaaaagcttctgaaaattgtcataagcagttttcataaattctcccaagcagtctcaca 15757620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 339
Target Start/End: Original strand, 18884899 - 18884980
Alignment:
Q  258 cttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcacaggttct 339  Q
    ||||| |||||||  ||||||||||||||| |||||||| ||| |||||  ||||| |||||||| ||| || ||| |||||    
T  18884899 cttatggaaataatctgaaaacagctaatggaaatgtcataagctgtttctataagctctcccaaacagccttacaagttct 18884980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 333
Target Start/End: Original strand, 32837377 - 32837430
Alignment:
Q  280 agctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||||||| | |||| | ||| ||||||||||||||||||||| ||||||||||    
T  32837377 agctaatggacatgttataagctgttttcataagttctcccaaacagtctcaca 32837430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 280
Target Start/End: Original strand, 37034047 - 37034076
Alignment:
Q  251 tggagagcttatagaaataagttgaaaaca 280  Q
    ||||||||||||||||||||||||||||||    
T  37034047 tggagagcttatagaaataagttgaaaaca 37034076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 312
Target Start/End: Complemental strand, 18179296 - 18179224
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataa 312  Q
    ||||||||||||||||| ||||   ||||||| |||||| |||||||| | |||||  ||| |||||||||||    
T  18179296 ataagctatcctggagaacttacgaaaataagctgaaaatagctaatggacatgtcttaagatgttttcataa 18179224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 283
Target Start/End: Original strand, 25790139 - 25790183
Alignment:
Q  239 gataagctatcctggagagcttatagaaataagttgaaaacagct 283  Q
    ||||| ||||||||||||||||||  ||||||||| |||||||||    
T  25790139 gataatctatcctggagagcttatgaaaataagttcaaaacagct 25790183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 328
Target Start/End: Original strand, 25800875 - 25800938
Alignment:
Q  265 aaataagttgaaaacagctaatgaa-aatgtcaaaagttgttttcataagttctcccaagcagtc 328  Q
    |||||||||||||| |||| ||||| ||||||| || ||||||| |||||||||||||| |||||    
T  25800875 aaataagttgaaaatagcttatgaacaatgtcagaa-ttgttttaataagttctcccaaacagtc 25800938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 333
Target Start/End: Complemental strand, 29429780 - 29429720
Alignment:
Q  273 tgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||||||||||| |||| ||||||  ||||||||  ||||| |||||||| ||||||||||    
T  29429780 tgaaaacagctagtgaatatgtcattagttgtttctataagctctcccaaacagtctcaca 29429720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 327
Target Start/End: Complemental strand, 43529907 - 43529827
Alignment:
Q  247 atcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagt 327  Q
    ||||| ||||||||||  ||||||  |||||| |||| ||||| ||| || ||| ||||||||||| ||||||||| ||||    
T  43529907 atcctagagagcttatgaaaataaactgaaaatagcttatgaacatggcataagctgttttcataaattctcccaaacagt 43529827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 319
Target Start/End: Original strand, 43570428 - 43570507
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaa-aatgtcaaaagttgttttcataagttctcc 319  Q
    |||||| |||||||| |||||||  ||||||| | |||| |||| ||||| ||||||| ||| ||||||||||||||||||    
T  43570428 ataagccatcctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcataagctgttttcataagttctcc 43570507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 30523668 - 30523752
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcc 319  Q
    |||| |||||||||||| ||||| |||||||||| |||||||||||||| ||||| ||| || ||||||||| |||||| |||||    
T  30523668 ttttcataagctatccttgagaggttatagaaattagttgaaaacagcttatgaacatggcataagttgtttccataagatctcc 30523752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 243 - 322
Target Start/End: Complemental strand, 7945937 - 7945858
Alignment:
Q  243 agctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaa 322  Q
    |||||||||||||||||||| |||||||| | |||||| ||||| || ||| || ||||||||||||||| |||||||||    
T  7945937 agctatcctggagagcttatggaaataagcttaaaacaactaataaacatgccataagttgttttcataatttctcccaa 7945858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 322
Target Start/End: Complemental strand, 20368241 - 20368154
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaa 322  Q
    |||| ||||||| || |||||| |||||  |||||||||||||  |||| ||||| |||||| |||||||||||||||||||||||||    
T  20368241 ttttcataagctttcttggagaacttatgaaaataagttgaaactagcttatgaacatgtcataagttgttttcataagttctcccaa 20368154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 317
Target Start/End: Original strand, 31624099 - 31624181
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttct 317  Q
    |||| ||| |||||| ||||||  ||||  ||||||||||||||||||| ||||| |||||| ||| ||||||||||||||||    
T  31624099 ttttcataggctatcttggagaaattatgaaaataagttgaaaacagcttatgaacatgtcataagctgttttcataagttct 31624181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 318
Target Start/End: Complemental strand, 32578042 - 32577964
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctc 318  Q
    ||||||||||||| ||||| ||| |||||||| ||||||||||| | | | |||||| |||||||||||||||| ||||    
T  32578042 ataagctatcctgaagagcatatggaaataagctgaaaacagctcaaggacatgtcataagttgttttcataagctctc 32577964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 333
Target Start/End: Original strand, 769180 - 769245
Alignment:
Q  268 taagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||||||||||||||| ||||| |||||| ||| |||||||||||||||  |||| ||||||||||    
T  769180 taagttgaaaacagcttatgaacatgtcataagatgttttcataagttcatccaaacagtctcaca 769245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 327
Target Start/End: Original strand, 2263201 - 2263293
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaaca-gctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagt 327  Q
    |||| |||||||||| | |||| |||||||||| |||||||||||| ||| ||||| |||||| | ||||||||||||||||||| ||| ||||    
T  2263201 tttttataagctatcttcgagaccttatagaaagaagttgaaaacacgct-atgaacatgtcatatgttgttttcataagttctctcaaacagt 2263293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 306
Target Start/End: Original strand, 4420658 - 4420723
Alignment:
Q  241 taagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttt 306  Q
    ||||||||| |||||||||||| |||||||| ||||||||||| ||||| |||||| || ||||||    
T  4420658 taagctatcttggagagcttatggaaataagctgaaaacagcttatgaacatgtcataatttgttt 4420723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 265 - 317
Target Start/End: Original strand, 1575934 - 1575986
Alignment:
Q  265 aaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttct 317  Q
    ||||||||| ||||||||| ||||| |||||| ||||||||||||||||||||    
T  1575934 aaataagttaaaaacagcttatgaacatgtcataagttgttttcataagttct 1575986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 241 - 333
Target Start/End: Complemental strand, 2460206 - 2460114
Alignment:
Q  241 taagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    ||||||||  |||||||||||| ||||||||||||||||| || |   | |||||| ||||||||| |||||| |||| ||| ||||||||||    
T  2460206 taagctattatggagagcttatggaaataagttgaaaacaacttaaagacatgtcataagttgtttccataagctctctcaaacagtctcaca 2460114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 241 - 333
Target Start/End: Original strand, 32171482 - 32171574
Alignment:
Q  241 taagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||| ||||||||||||||||| |||||||| ||||||||| | ||| |  | ||| ||||||||| | |||| |||||||| ||||||||||    
T  32171482 taaggtatcctggagagcttatggaaataagctgaaaacagttcatggaggtatcataagttgtttccttaagctctcccaaccagtctcaca 32171574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 302
Target Start/End: Original strand, 25100052 - 25100119
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagtt 302  Q
    |||| |||||||||| |  ||||||||||||||||||||||||| ||| |||||| |||||| |||||    
T  25100052 ttttcataagctatcttaaagagcttatagaaataagttgaaaatagcaaatgaacatgtcataagtt 25100119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 318
Target Start/End: Complemental strand, 31686424 - 31686341
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctc 318  Q
    |||| ||||||||||||||||||||||  || ||||| ||||||||| | || ||  ||||| |||||||||| ||||||||||    
T  31686424 ttttcataagctatcctggagagcttacggacataagctgaaaacagattataaacttgtcataagttgttttgataagttctc 31686341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 34403883 - 34403958
Alignment:
Q  254 agagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtct 329  Q
    ||||||||| |||||||| |||||||| || ||||| |||||| ||||||||||| ||| |||||| || ||||||    
T  34403883 agagcttatggaaataaggtgaaaacaccttatgaacatgtcataagttgttttcttaacttctcctaaacagtct 34403958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 313
Target Start/End: Original strand, 2455819 - 2455897
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataag 313  Q
    |||| |||||||||| |||||||||||| ||||||||||||||| || | |||   |||||| ||||||||| ||||||    
T  2455819 ttttcataagctatcttggagagcttatggaaataagttgaaaatagtttatgggcatgtcataagttgtttccataag 2455897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 306
Target Start/End: Complemental strand, 9668029 - 9667975
Alignment:
Q  252 ggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttt 306  Q
    ||||||||||| |||||||||||||||||||| ||| | |||||| |||||||||    
T  9668029 ggagagcttatggaaataagttgaaaacagcttatggacatgtcataagttgttt 9667975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 333
Target Start/End: Complemental strand, 281904 - 281811
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||||||||||| ||||||| || |||||||| |||||||| || ||  | |||||| |||||| || ||| || |||||||| ||||||||||    
T  281904 ataagctatcctagagagctcatggaaataagctgaaaacaacttatagacatgtcataagttgcttccattagctctcccaaacagtctcaca 281811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 8010366 - 8010450
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcc 319  Q
    |||| ||||| ||||||||||| |||||||||||||  |||||| |||| ||||| ||||||  ||||||||  ||||| |||||    
T  8010366 ttttaataagttatcctggagaacttatagaaataaactgaaaatagcttatgaacatgtcatgagttgtttctataagctctcc 8010450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 329
Target Start/End: Complemental strand, 10645387 - 10645351
Alignment:
Q  293 gtcaaaagttgttttcataagttctcccaagcagtct 329  Q
    |||||||||||||||||||||||||||||| ||||||    
T  10645387 gtcaaaagttgttttcataagttctcccaaacagtct 10645351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 30863274 - 30863342
Alignment:
Q  254 agagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaa 322  Q
    ||||||||||||| |||| |||||||| || ||| | |||||| |||||||||||||||| ||| ||||    
T  30863274 agagcttatagaagtaagctgaaaacaacttatgtacatgtcataagttgttttcataagctctaccaa 30863342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 306
Target Start/End: Original strand, 4246419 - 4246490
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttt 306  Q
    |||| |||||||||  |||||||| |||| ||||||||||||||||||| ||| | ||||||  ||||||||    
T  4246419 ttttcataagctattatggagagcatataaaaataagttgaaaacagcttatggacatgtcatgagttgttt 4246490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 306
Target Start/End: Original strand, 7148675 - 7148746
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttt 306  Q
    |||| |||||||| ||||||||||||||  |||||||||||||| |||| ||| | | |||| |||||||||    
T  7148675 ttttaataagctaccctggagagcttatgaaaataagttgaaaatagcttatggacaagtcataagttgttt 7148746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 7931780 - 7931709
Alignment:
Q  242 aagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataag 313  Q
    ||||||||||  ||||||||  |||||||| |||||||| || | ||| |||||| ||||||||||||||||    
T  7931780 aagctatcctacagagcttacggaaataagctgaaaacaacttaagaacatgtcataagttgttttcataag 7931709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 322
Target Start/End: Complemental strand, 8035209 - 8035122
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaa 322  Q
    |||| ||||| |||||| || ||||||   ||||||||||||||||  | ||||  |||||| ||||||||||| |||||||||||||    
T  8035209 ttttcataagttatcctagaaagcttacgaaaataagttgaaaacaagttatgaccatgtcataagttgttttcttaagttctcccaa 8035122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 322
Target Start/End: Complemental strand, 10616602 - 10616515
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaa 322  Q
    |||| |||||||||  ||||||||||||| ||||||| |||| ||| || | | | |||||| ||||||||| |||||| ||||||||    
T  10616602 ttttaataagctattttggagagcttataaaaataagctgaacacaacttacggacatgtcataagttgtttccataagctctcccaa 10616515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 259 - 322
Target Start/End: Complemental strand, 10616750 - 10616687
Alignment:
Q  259 ttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaa 322  Q
    ||||| ||||||  ||||||||||| ||||| |||||| ||| |||||| ||||||||||||||    
T  10616750 ttataaaaataaactgaaaacagcttatgaacatgtcataaggtgttttgataagttctcccaa 10616687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 319
Target Start/End: Original strand, 12628356 - 12628434
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcc 319  Q
    |||||||||  |||||| |||||  || |||||||||||||||||||| |||||||| ||| |||||||||  |||||||    
T  12628356 ataagctattttggagaacttatgaaagtaagttgaaaacagctaatg-aaatgtcagaagctgttttcatttgttctcc 12628434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 315
Target Start/End: Original strand, 30523951 - 30524026
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagtt 315  Q
    ||||||||||||  ||||||||| |||||||| | ||| || |||||| | |||||| || |||||||||||||||    
T  30523951 ataagctatcctaaagagcttatggaaataagctaaaagcaactaatggacatgtcataatttgttttcataagtt 30524026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 318
Target Start/End: Original strand, 33887839 - 33887922
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctc 318  Q
    |||| ||||||||||||| |  |||||| ||||||||||||||||| ||  |||| |||||| ||| | ||||||||| |||||    
T  33887839 ttttcataagctatcctgaaatgcttatggaaataagttgaaaacaacttgtgaacatgtcataagctattttcataaattctc 33887922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 312
Target Start/End: Original strand, 4080952 - 4081002
Alignment:
Q  262 tagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataa 312  Q
    ||||||||||||||||||| || ||||| ||| || |||||||||||||||    
T  4080952 tagaaataagttgaaaacaacttatgaacatggcataagttgttttcataa 4081002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 331
Target Start/End: Complemental strand, 29754161 - 29754063
Alignment:
Q  234 cttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgt-caaaagttgttttcataagttctcccaagcagtctca 331  Q
    ||||| |||| ||||  |||||| |||||| ||||||||||||||||    |||||||| | || ||| ||||||| ||||||||||||| ||||||||    
T  29754161 ctttttataaactatattggagaacttataaaaataagttgaaaacattctatgaaaatatgcataagctgttttcgtaagttctcccaaacagtctca 29754063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 333
Target Start/End: Original strand, 32975987 - 32976085
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||| |||||||||||||||  | ||||||||  | | ||||||||||| ||| |||||||| ||| |||||  ||||| ||| |||| ||||||||||    
T  32975987 ttttcataagctatcctggaatgattatagaagcacgctgaaaacagcttatggaaatgtcataagctgtttctataagctcttccaaacagtctcaca 32976085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 321
Target Start/End: Original strand, 34404114 - 34404184
Alignment:
Q  251 tggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctccca 321  Q
    |||||||||||||||||||||||||||||| || ||  | |||| | | | ||||| ||||||||||||||    
T  34404114 tggagagcttatagaaataagttgaaaacaacttatatacatgtaatagggtgtttccataagttctccca 34404184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 331
Target Start/End: Complemental strand, 836535 - 836502
Alignment:
Q  298 aagttgttttcataagttctcccaagcagtctca 331  Q
    ||||||||||||||||||||||||| ||||||||    
T  836535 aagttgttttcataagttctcccaaacagtctca 836502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 322
Target Start/End: Complemental strand, 1669849 - 1669772
Alignment:
Q  245 ctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaa 322  Q
    ||||||| ||| |||| | ||||| || ||||||||||| ||  | |||||| |||||||||||||||| ||||||||    
T  1669849 ctatcctagagggcttgtcgaaatgagctgaaaacagcttatagacatgtcataagttgttttcataagctctcccaa 1669772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 312
Target Start/End: Complemental strand, 2034507 - 2034430
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataa 312  Q
    |||| |||||||| | || ||||||||  |||||||| ||||||||||| ||| |||||||| ||| ||||| |||||    
T  2034507 ttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataagctgtttccataa 2034430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 282
Target Start/End: Complemental strand, 3168316 - 3168275
Alignment:
Q  241 taagctatcctggagagcttatagaaataagttgaaaacagc 282  Q
    |||||||||||||||||||||  |||||||| ||||||||||    
T  3168316 taagctatcctggagagcttaaggaaataagctgaaaacagc 3168275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 6647396 - 6647457
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtca 296  Q
    |||| |||||||||| | ||||||||||  |||||||||||||||| || ||||| ||||||    
T  6647396 ttttcataagctatcttagagagcttatgaaaataagttgaaaacatcttatgaacatgtca 6647457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 331
Target Start/End: Complemental strand, 9559544 - 9559503
Alignment:
Q  290 aatgtcaaaagttgttttcataagttctcccaagcagtctca 331  Q
    ||||||| |||||||||||||||||||||||||  |||||||    
T  9559544 aatgtcataagttgttttcataagttctcccaaatagtctca 9559503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 26559259 - 26559202
Alignment:
Q  276 aaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    ||||||||  |||| || ||| |||||||||||||||||||| |||| ||||||||||    
T  26559259 aaacagcttgtgaacatatcataagttgttttcataagttcttccaaacagtctcaca 26559202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 309
Target Start/End: Complemental strand, 33080634 - 33080565
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttca 309  Q
    |||| ||||||||||||||||||||||||||  |||||| | || || || |||||| |||||| |||||    
T  33080634 ataaactatcctggagagcttatagaaataaactgaaaataacttataaacatgtcataagttggtttca 33080565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 333
Target Start/End: Original strand, 34939758 - 34939851
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||||||||||||||||| |||| |||||||| ||||||||  | ||| | |||||| ||| ||||| | |||| ||||| || |||| |||||    
T  34939758 ataagctatcctggagagtttatggaaataagctgaaaacaatttatggacatgtcataagctgtttccgtaagctctccaaaacagtttcaca 34939851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 312
Target Start/End: Complemental strand, 2027462 - 2027390
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataa 312  Q
    |||||||| | || |||| ||| | ||||||| ||||||||||| ||| |||||||| ||| |||||||||||    
T  2027462 ataagctagcatgtagagtttaaataaataagctgaaaacagcttatggaaatgtcataagctgttttcataa 2027390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 330
Target Start/End: Complemental strand, 32171433 - 32171349
Alignment:
Q  246 tatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctc 330  Q
    ||||||||| ||||||| |||||||| |||||| ||||  || |  ||||| ||| |||||||||||| |||| ||| |||||||    
T  32171433 tatcctggatagcttatggaaataagctgaaaatagcttctggacttgtcataagctgttttcataagctctctcaaacagtctc 32171349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 5e-16; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 333
Target Start/End: Complemental strand, 21568556 - 21568457
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaat-gtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||| |||||||||  |||||| ||||| ||| ||||||||||| |||| |||||||| || | ||| ||||||||||||||||||||| ||||||||||    
T  21568556 tttttataagctatattggagaacttatggaactaagttgaaaagagcttatgaaaattgttataagctgttttcataagttctcccaaacagtctcaca 21568457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 333
Target Start/End: Complemental strand, 22387941 - 22387859
Alignment:
Q  251 tggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||||||||||| |||||||||| ||||||| | || || ||| || |||||||||||||||| |||||||| ||||||||||    
T  22387941 tggagagcttatggaaataagttaaaaacagtttataaacatgccataagttgttttcataagctctcccaaacagtctcaca 22387859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 333
Target Start/End: Complemental strand, 19022646 - 19022547
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaat-gtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||| |||||||||  |||||| |||||  |||||||||||| ||| || |||||||| |||| ||||||||||||||| ||||||||| || |||||||    
T  19022646 tttttataagctatattggagaacttatgaaaataagttgaagacaacttatgaaaattgtcataagttgttttcataaattctcccaaacaatctcaca 19022547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 312
Target Start/End: Complemental strand, 9423655 - 9423578
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataa 312  Q
    |||| ||||||||||||||||||||| | |||||||| |||||||| || ||||| |||||| || |||||| |||||    
T  9423655 ttttaataagctatcctggagagcttcttgaaataagctgaaaacaacttatgaacatgtcataaattgtttccataa 9423578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 289
Target Start/End: Original strand, 28165105 - 28165154
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaa 289  Q
    |||||||||| |||||||||||| |||||||||||||||||||| |||||    
T  28165105 ataagctatcatggagagcttatggaaataagttgaaaacagcttatgaa 28165154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 265 - 333
Target Start/End: Original strand, 34035956 - 34036025
Alignment:
Q  265 aaataagttgaaaacagctaatgaa-aatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||||||||||||||| || ||||| ||||||| ||||| |||||||||||||| ||||| |||||||||    
T  34035956 aaataagttgaaaacaacttatgaacaatgtcataagttattttcataagttcttccaagtagtctcaca 34036025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 227 - 327
Target Start/End: Original strand, 5276232 - 5276332
Alignment:
Q  227 gttttgacttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcag 326  Q
    ||||| |||||| ||||||||||||||| | || ||  ||||||| |||||||| |||||||| |||||| ||| ||||| |||||| |||| ||| |||    
T  5276232 gttttcacttttcataagctatcctggaaaactaatgaaaataaggtgaaaacaactaatgaagatgtcataagatgtttgcataagctctctcaaacag 5276331  T
Q  327 t 327  Q
    |    
T  5276332 t 5276332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 265 - 317
Target Start/End: Complemental strand, 15740442 - 15740390
Alignment:
Q  265 aaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttct 317  Q
    ||||||||| ||||||||| ||||| |||||| ||||||||||||||||||||    
T  15740442 aaataagttaaaaacagcttatgaacatgtcataagttgttttcataagttct 15740390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 322
Target Start/End: Original strand, 33678789 - 33678877
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaa-aatgtcaaaagttgttttcataagttctcccaa 322  Q
    |||| |||||||||| |||| | ||| |  |||||||||||||||| || ||||| ||||| | |||||||||||||||||||||||||    
T  33678789 ttttcataagctatcttggaaaacttgtgaaaataagttgaaaacatctcatgaacaatgttataagttgttttcataagttctcccaa 33678877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 241 - 333
Target Start/End: Original strand, 33894642 - 33894734
Alignment:
Q  241 taagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||||||||||||| || |||| |||||||| |||||||| || ||| | |||||| | | |||||||||||| |||| ||| ||||||||||    
T  33894642 taagctatcctggaaagtttattgaaataagctgaaaacaacttatggacatgtcatatgctgttttcataagctctcacaaacagtctcaca 33894734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 322
Target Start/End: Complemental strand, 3968818 - 3968732
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaa 322  Q
    |||| |||||||||||||||||| |||| |||||||  ||||| || || |||||||||||  |||||| ||||||||||| ||||||    
T  3968818 ttttcataagctatcctggagagtttatggaaataacatgaaatcaacttatgaaaatgtctgaagttg-tttcataagttatcccaa 3968732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 333
Target Start/End: Complemental strand, 48157174 - 48157083
Alignment:
Q  242 aagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    ||||||| | ||||| ||||| |||||||| ||||||||||| ||| | ||| || |||||||||  ||||| |||||||| ||||||||||    
T  48157174 aagctattcgggagatcttatggaaataagctgaaaacagcttatggacatggcataagttgtttctataagctctcccaaacagtctcaca 48157083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 333
Target Start/End: Complemental strand, 12234942 - 12234852
Alignment:
Q  243 agctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||| |||| |||||||||| |||||||| ||||||||||| ||  | |||||| |||||||||  ||||| | | |||||||||||||||    
T  12234942 agctttcctagagagcttatggaaataagctgaaaacagcttatagacatgtcataagttgtttctataagctattccaagcagtctcaca 12234852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 333
Target Start/End: Original strand, 420375 - 420468
Alignment:
Q  241 taagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaa-tgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    ||||||||  |||||| |||||  ||||||||||||||  |||   ||||| ||||| || |||||||||||||||||||||| ||||||||||    
T  420375 taagctatattggagaacttatgaaaataagttgaaaaaggctttagaaaactgtcataaattgttttcataagttctcccaaacagtctcaca 420468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 333
Target Start/End: Complemental strand, 3836738 - 3836646
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||||||||| ||||||||| ||  |||||||||||| || ||| ||| || ||||| ||| | ||||||||||||||||||| |||| |||||    
T  3836738 ataagctatcttggagagctaatgaaaataagttgaagacggcttatgtaa-tgtcataagctattttcataagttctcccaaacagtttcaca 3836646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 322
Target Start/End: Complemental strand, 11619203 - 11619131
Alignment:
Q  251 tggagagcttatagaaataagttgaaaacagctaatgaaaat-gtcaaaagttgttttcataagttctcccaa 322  Q
    |||||| |||||  || ||||||||||| |||| |||||||| |||| ||||||||||||||| |||||||||    
T  11619203 tggagaacttatgaaattaagttgaaaaaagcttatgaaaattgtcataagttgttttcataaattctcccaa 11619131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 318
Target Start/End: Original strand, 19719038 - 19719098
Alignment:
Q  258 cttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctc 318  Q
    |||||| | ||||| ||||||||| | ||||| |||||| |||||||||||||||||||||    
T  19719038 cttataaagataagctgaaaacagtttatgaacatgtcataagttgttttcataagttctc 19719098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 333
Target Start/End: Complemental strand, 45859577 - 45859490
Alignment:
Q  245 ctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    ||||| || |||||||||||||||||| |||||||| || ||||| |||||| | ||||||| | |||| ||| |||| ||||||||||    
T  45859577 ctatcatgaagagcttatagaaataagctgaaaacaact-atgaacatgtcatatgttgtttccgtaagctcttccaaacagtctcaca 45859490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 302
Target Start/End: Original strand, 529384 - 529451
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagtt 302  Q
    |||| |||||||||| ||||||||||||  ||||| ||||||||||||| |||||  ||||| |||||    
T  529384 ttttcataagctatcttggagagcttatgaaaatatgttgaaaacagcttatgaacttgtcataagtt 529451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 333
Target Start/End: Complemental strand, 4970789 - 4970754
Alignment:
Q  298 aagttgttttcataagttctcccaagcagtctcaca 333  Q
    ||||||||||||||||||||||||| ||||||||||    
T  4970789 aagttgttttcataagttctcccaaacagtctcaca 4970754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 266 - 317
Target Start/End: Original strand, 11048067 - 11048118
Alignment:
Q  266 aataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttct 317  Q
    |||||| ||||||||||| ||||| |||||| |||||||||| |||||||||    
T  11048067 aataagctgaaaacagcttatgaacatgtcataagttgttttgataagttct 11048118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 246 - 333
Target Start/End: Complemental strand, 25670636 - 25670549
Alignment:
Q  246 tatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||| |||||||||| |  ||||||| ||||||||  | || || |||||| |||||||||||||||||| || ||| ||||||||||    
T  25670636 tatcttggagagcttgtgaaaataagctgaaaacaatttattaacatgtcataagttgttttcataagttttctcaaacagtctcaca 25670549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 314
Target Start/End: Original strand, 28702759 - 28702837
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagt 314  Q
    |||| |||||||||||||| ||||| || ||||||||||  |||| ||| ||||| |||||| |||||||||| ||||||    
T  28702759 ttttcataagctatcctggcgagctcatggaaataagtt-caaaccgcttatgaacatgtcataagttgtttttataagt 28702837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 333
Target Start/End: Complemental strand, 44989682 - 44989639
Alignment:
Q  290 aatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    ||||||| |||||||||||||||||| |||||| ||||||||||    
T  44989682 aatgtcagaagttgttttcataagttttcccaaacagtctcaca 44989639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 331
Target Start/End: Original strand, 48131567 - 48131658
Alignment:
Q  240 ataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctca 331  Q
    |||| ||||||||||||||||||    ||||| |||||| || | |||||||||||| || || ||||| |||||||| |||| ||||||||    
T  48131567 ataatctatcctggagagcttatgagtataagctgaaaatagtttatgaaaatgtcataacttattttcgtaagttcttccaaacagtctca 48131658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 315
Target Start/End: Original strand, 941567 - 941629
Alignment:
Q  253 gagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagtt 315  Q
    |||||||||||||||||| || ||||| ||| ||| | |||||| ||||||||| ||||||||    
T  941567 gagagcttatagaaataaatttaaaactgcttatggacatgtcataagttgtttccataagtt 941629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 24363662 - 24363600
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaa 297  Q
    |||| |||||||||||||||||| |||| |||||||| |||||||| || ||| | |||||||    
T  24363662 ttttcataagctatcctggagaggttatggaaataagctgaaaacaacttatggacatgtcaa 24363600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 280
Target Start/End: Original strand, 25596041 - 25596087
Alignment:
Q  234 cttttgataagctatcctggagagcttatagaaataagttgaaaaca 280  Q
    ||||| |||||||||| ||||||||||||  ||||||||||||||||    
T  25596041 cttttcataagctatcttggagagcttatgaaaataagttgaaaaca 25596087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 329
Target Start/End: Complemental strand, 28521053 - 28520979
Alignment:
Q  255 gagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtct 329  Q
    |||||||| ||||  || ||||||||||| ||  | |||||| ||||||||| |||||||||||| |||||||||    
T  28521053 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtct 28520979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 333
Target Start/End: Complemental strand, 36598401 - 36598319
Alignment:
Q  251 tggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctcaca 333  Q
    |||||||| | | |||||||| ||||||||||| ||||| |||||| ||| ||||| |||||| |||| ||| || |||||||    
T  36598401 tggagagcgttttgaaataagctgaaaacagcttatgaacatgtcataagatgtttccataagctctctcaaacaatctcaca 36598319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 312
Target Start/End: Original strand, 39360039 - 39360109
Alignment:
Q  242 aagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataa 312  Q
    |||||||||||| |||||||| |||||||| ||||| || || ||| | |||||| ||||||||| |||||    
T  39360039 aagctatcctggcgagcttattgaaataagctgaaagcaacttatggatatgtcataagttgtttccataa 39360109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 318
Target Start/End: Original strand, 39967959 - 39968013
Alignment:
Q  265 aaataagttgaaaacagctaatgaa-aatgtcaaaagttgttttcataagttctc 318  Q
    ||||||||||||||||||| ||||| |||| || ||| |||||||||||||||||    
T  39967959 aaataagttgaaaacagcttatgaacaatgccataagctgttttcataagttctc 39968013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 318
Target Start/End: Original strand, 46082054 - 46082128
Alignment:
Q  244 gctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctc 318  Q
    ||||| |||||||||||||  ||||||| |||||||| || |||   |||||| |||||||||||||||| ||||    
T  46082054 gctattctggagagcttatgaaaataagctgaaaacaacttatggtcatgtcataagttgttttcataagctctc 46082128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 330
Target Start/End: Original strand, 30535610 - 30535667
Alignment:
Q  273 tgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctc 330  Q
    ||||||||||| | ||| || ||| |||||||||||||||||||||| || |||||||    
T  30535610 tgaaaacagcttacgaacatatcataagttgttttcataagttctccaaaacagtctc 30535667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 331
Target Start/End: Original strand, 23214896 - 23214960
Alignment:
Q  267 ataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagtctca 331  Q
    ||||| |||| | |||| ||| |||||||| ||||||||||||||| ||||| ||| ||||||||    
T  23214896 ataagctgaatagagcttatggaaatgtcataagttgttttcataaattctctcaaacagtctca 23214960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 35056875 - 35056831
Alignment:
Q  249 cctggagagcttatagaaataagttgaaaacagctaatgaaaatg 293  Q
    |||||||||||||| |||||||| |||| |||||| |||||||||    
T  35056875 cctggagagcttatggaaataagctgaatacagcttatgaaaatg 35056831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 319
Target Start/End: Complemental strand, 44615165 - 44615081
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcc 319  Q
    |||| ||||| || ||| ||||| |||| |||||||  |||||||||||  || | |||||| |||||||||||||||| |||||    
T  44615165 ttttcataagttagccttgagagtttatggaaataacgtgaaaacagcttgtggacatgtcataagttgttttcataagctctcc 44615081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 45078287 - 45078371
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcc 319  Q
    |||| ||||||||||  ||| | ||| | |||||||||||||||||||| ||| | |||||| ||||| |||  |||||||||||    
T  45078287 ttttcataagctatcacggataacttgtggaaataagttgaaaacagcttatggacatgtcataagttatttctataagttctcc 45078371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 327
Target Start/End: Complemental strand, 9668 - 9606
Alignment:
Q  265 aaataagttgaaaacagctaatgaaaatgtcaaaagttgttttcataagttctcccaagcagt 327  Q
    ||||||| | ||||||||| ||||| |||| | ||||||||||||||||||||| ||| ||||    
T  9668 aaataagctaaaaacagcttatgaacatgtaataagttgttttcataagttctctcaaacagt 9606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 32756 - 32800
Alignment:
Q  235 ttttgataagctatcctggagagcttatagaaataagttgaaaac 279  Q
    |||| ||||||||||||  |||| |||||||||||||||||||||    
T  32756 tttttataagctatcctacagagtttatagaaataagttgaaaac 32800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University