View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1738-Insertion-2 (Length: 243)
Name: NF1738-Insertion-2
Description: NF1738
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1738-Insertion-2 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 7 - 243
Target Start/End: Original strand, 11731544 - 11731780
Alignment:
| Q |
7 |
acaaacatccaagactttaatgtcaagaacaaaagcattgacagcaaaacccagtttagacgatgtaattaatacaaacatacacactatcgagtcaatc |
106 |
Q |
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| T |
11731544 |
acaaacatccaagactttaatgtcaagaacaaaagcattgacagcaaaacccagtttagacgatgtaattaatacaaacatacacactatcgagtcaatc |
11731643 |
T |
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| Q |
107 |
taatttgactgcttcacaatcttaacatataccactcgcgcaaagccaaagccaactatatttatatatttggaacaattttgacaaatcaagagatgct |
206 |
Q |
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| T |
11731644 |
taatttgactgcttcacaatcttaacatataccactcgcgcaaagccaaagccaactatatttatatatttggaacaattttgacaaatcaagagatgct |
11731743 |
T |
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| Q |
207 |
ttaagcagcaccttcctcttcttcctcctcctcataa |
243 |
Q |
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| T |
11731744 |
ttaagcagcaccttcctcttcttcctcctcctcataa |
11731780 |
T |
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