View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17380_low_23 (Length: 440)

Name: NF17380_low_23
Description: NF17380
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17380_low_23
NF17380_low_23
[»] chr5 (24 HSPs)
chr5 (248-425)||(16968514-16968688)
chr5 (18-89)||(8145573-8145644)
chr5 (18-90)||(33584122-33584194)
chr5 (18-88)||(4892402-4892472)
chr5 (18-88)||(14138867-14138937)
chr5 (18-88)||(37321588-37321658)
chr5 (18-90)||(6043305-6043377)
chr5 (18-88)||(3521802-3521872)
chr5 (18-88)||(25398438-25398508)
chr5 (18-89)||(2477836-2477907)
chr5 (18-85)||(12851002-12851069)
chr5 (21-88)||(22912852-22912919)
chr5 (18-91)||(38899517-38899591)
chr5 (18-87)||(3362979-3363048)
chr5 (18-88)||(12614532-12614603)
chr5 (18-67)||(11360947-11360996)
chr5 (23-88)||(17545477-17545542)
chr5 (21-84)||(4434004-4434068)
chr5 (21-84)||(12614730-12614794)
chr5 (21-84)||(22913051-22913115)
chr5 (18-76)||(10458409-10458468)
chr5 (21-84)||(6043508-6043572)
chr5 (21-76)||(8145387-8145443)
chr5 (58-86)||(12614483-12614511)
[»] chr8 (44 HSPs)
chr8 (18-91)||(10044548-10044621)
chr8 (18-88)||(37985851-37985921)
chr8 (18-90)||(17841643-17841715)
chr8 (18-89)||(3596835-3596906)
chr8 (18-88)||(1503638-1503708)
chr8 (18-88)||(26041908-26041978)
chr8 (18-88)||(40779924-40779994)
chr8 (18-87)||(14129059-14129128)
chr8 (21-86)||(20091598-20091663)
chr8 (21-86)||(34665584-34665649)
chr8 (18-86)||(24211169-24211237)
chr8 (18-88)||(1645759-1645829)
chr8 (18-88)||(6108028-6108098)
chr8 (18-88)||(15187760-15187830)
chr8 (18-92)||(42754833-42754907)
chr8 (18-91)||(25581031-25581104)
chr8 (21-90)||(30055719-30055788)
chr8 (18-88)||(31347571-31347641)
chr8 (18-88)||(32064946-32065016)
chr8 (21-85)||(3890412-3890477)
chr8 (25-86)||(38017140-38017201)
chr8 (18-76)||(35353241-35353299)
chr8 (18-77)||(39772608-39772667)
chr8 (21-86)||(37132477-37132543)
chr8 (22-90)||(24844653-24844722)
chr8 (24-88)||(7022185-7022249)
chr8 (21-88)||(30834850-30834918)
chr8 (18-76)||(32394057-32394114)
chr8 (18-63)||(8454033-8454078)
chr8 (21-76)||(7021990-7022046)
chr8 (25-84)||(15187564-15187624)
chr8 (21-84)||(27782114-27782178)
chr8 (21-84)||(32064749-32064813)
chr8 (21-84)||(34665386-34665450)
chr8 (26-76)||(1886621-1886672)
chr8 (39-88)||(7017653-7017702)
chr8 (21-84)||(17841847-17841911)
chr8 (21-84)||(20091798-20091862)
chr8 (21-84)||(31347779-31347843)
chr8 (21-76)||(38016983-38017039)
chr8 (21-84)||(40780126-40780190)
chr8 (21-57)||(41819594-41819630)
chr8 (21-76)||(41819775-41819831)
chr8 (21-76)||(42755039-42755095)
[»] scaffold0204 (1 HSPs)
scaffold0204 (18-92)||(4596-4670)
[»] chr4 (41 HSPs)
chr4 (18-88)||(10442582-10442652)
chr4 (18-91)||(36073549-36073622)
chr4 (18-88)||(22199459-22199529)
chr4 (18-88)||(46442044-46442114)
chr4 (18-90)||(44893626-44893698)
chr4 (21-88)||(21802115-21802182)
chr4 (18-88)||(7744907-7744977)
chr4 (18-88)||(33530479-33530549)
chr4 (18-88)||(44893008-44893078)
chr4 (18-88)||(47290266-47290336)
chr4 (18-88)||(53123231-53123301)
chr4 (18-86)||(9089070-9089138)
chr4 (18-88)||(2625037-2625107)
chr4 (18-88)||(31078614-31078684)
chr4 (18-88)||(36073151-36073221)
chr4 (18-88)||(49387682-49387752)
chr4 (18-88)||(4751647-4751717)
chr4 (22-90)||(25063367-25063436)
chr4 (19-88)||(50156374-50156443)
chr4 (21-88)||(11314046-11314114)
chr4 (18-86)||(24128439-24128507)
chr4 (18-78)||(23964269-23964329)
chr4 (23-88)||(37219836-37219902)
chr4 (23-88)||(42671873-42671939)
chr4 (18-86)||(17655630-17655699)
chr4 (21-84)||(33530685-33530749)
chr4 (21-88)||(37934736-37934804)
chr4 (23-86)||(24392879-24392942)
chr4 (25-91)||(36073253-36073320)
chr4 (21-84)||(2624841-2624905)
chr4 (21-84)||(10442786-10442850)
chr4 (21-84)||(24392671-24392735)
chr4 (21-84)||(31078816-31078880)
chr4 (21-84)||(49387885-49387949)
chr4 (23-84)||(22199265-22199327)
chr4 (48-92)||(53998975-53999020)
chr4 (21-84)||(21802319-21802383)
chr4 (21-84)||(36072951-36073015)
chr4 (21-84)||(36073354-36073418)
chr4 (21-84)||(46441848-46441912)
chr4 (21-84)||(47290070-47290134)
[»] chr3 (38 HSPs)
chr3 (18-88)||(33113994-33114064)
chr3 (18-90)||(30385600-30385672)
chr3 (18-88)||(3137209-3137279)
chr3 (18-88)||(6042077-6042147)
chr3 (22-88)||(22426140-22426206)
chr3 (18-88)||(34482683-34482753)
chr3 (18-88)||(37216848-37216918)
chr3 (18-87)||(8320378-8320447)
chr3 (18-90)||(2754919-2754991)
chr3 (18-90)||(19650693-19650765)
chr3 (18-89)||(3089619-3089690)
chr3 (21-86)||(33145915-33145980)
chr3 (20-88)||(3574321-3574389)
chr3 (18-89)||(37522253-37522324)
chr3 (18-88)||(3456264-3456334)
chr3 (23-91)||(47738316-47738385)
chr3 (21-88)||(40328034-40328102)
chr3 (18-88)||(48161106-48161176)
chr3 (21-88)||(36864827-36864895)
chr3 (21-88)||(41224437-41224504)
chr3 (22-88)||(9796824-9796890)
chr3 (21-90)||(26612949-26613019)
chr3 (21-88)||(8361834-8361901)
chr3 (21-76)||(33839738-33839794)
chr3 (20-87)||(46919096-46919164)
chr3 (39-92)||(24343770-24343824)
chr3 (21-86)||(42921328-42921394)
chr3 (18-76)||(47738117-47738176)
chr3 (21-84)||(3456068-3456132)
chr3 (21-84)||(48160909-48160973)
chr3 (18-84)||(2754721-2754788)
chr3 (58-91)||(42298092-42298125)
chr3 (21-84)||(3137411-3137475)
chr3 (21-84)||(6041888-6041952)
chr3 (21-76)||(8320581-8320637)
chr3 (21-76)||(9797026-9797082)
chr3 (21-84)||(34482907-34482971)
chr3 (18-73)||(41883031-41883087)
[»] chr1 (30 HSPs)
chr1 (18-88)||(20304925-20304995)
chr1 (18-87)||(40215188-40215257)
chr1 (18-88)||(3559817-3559887)
chr1 (18-88)||(25463876-25463946)
chr1 (18-88)||(51737705-51737775)
chr1 (18-90)||(25973607-25973679)
chr1 (18-89)||(9910085-9910156)
chr1 (18-89)||(19722893-19722964)
chr1 (18-89)||(37821628-37821699)
chr1 (22-88)||(18404652-18404718)
chr1 (18-88)||(19015604-19015674)
chr1 (18-88)||(36966503-36966573)
chr1 (18-88)||(41876237-41876307)
chr1 (18-97)||(44094897-44094975)
chr1 (18-88)||(6883687-6883757)
chr1 (21-90)||(32000059-32000128)
chr1 (21-88)||(33786426-33786493)
chr1 (21-85)||(33786632-33786696)
chr1 (21-86)||(40273911-40273976)
chr1 (21-86)||(44690818-44690884)
chr1 (21-87)||(52064373-52064440)
chr1 (21-88)||(27523050-27523118)
chr1 (21-84)||(16045795-16045859)
chr1 (21-84)||(19015408-19015472)
chr1 (21-84)||(36966705-36966769)
chr1 (21-84)||(37821831-37821895)
chr1 (21-84)||(40214992-40215056)
chr1 (21-84)||(40273706-40273770)
chr1 (18-93)||(10167599-10167675)
chr1 (21-84)||(44094702-44094766)
[»] chr7 (28 HSPs)
chr7 (18-90)||(24395171-24395243)
chr7 (18-88)||(25167651-25167721)
chr7 (18-88)||(34483038-34483108)
chr7 (18-88)||(35445597-35445667)
chr7 (18-88)||(45637911-45637981)
chr7 (18-91)||(30848769-30848842)
chr7 (18-88)||(3962178-3962248)
chr7 (18-88)||(15577642-15577712)
chr7 (18-88)||(42612011-42612081)
chr7 (22-88)||(48880722-48880788)
chr7 (21-86)||(4974532-4974597)
chr7 (22-88)||(15329478-15329544)
chr7 (18-92)||(35876444-35876518)
chr7 (21-87)||(37476876-37476942)
chr7 (21-88)||(18037180-18037247)
chr7 (23-86)||(20009895-20009959)
chr7 (24-91)||(36790268-36790336)
chr7 (21-88)||(42696286-42696354)
chr7 (21-79)||(29737347-29737406)
chr7 (22-89)||(40880640-40880706)
chr7 (23-88)||(15238589-15238654)
chr7 (21-84)||(4974732-4974796)
chr7 (21-84)||(15577847-15577911)
chr7 (21-84)||(42611815-42611879)
chr7 (21-84)||(45637716-45637780)
chr7 (21-54)||(20953116-20953149)
chr7 (21-84)||(15329277-15329341)
chr7 (21-84)||(48880924-48880988)
[»] chr2 (28 HSPs)
chr2 (18-90)||(33380407-33380479)
chr2 (18-89)||(35160959-35161030)
chr2 (21-91)||(9293367-9293437)
chr2 (18-92)||(10662088-10662162)
chr2 (18-91)||(7475300-7475373)
chr2 (22-93)||(13355052-13355123)
chr2 (18-88)||(23267857-23267927)
chr2 (21-88)||(22592915-22592983)
chr2 (26-85)||(31174633-31174692)
chr2 (18-84)||(3989276-3989342)
chr2 (18-88)||(43331112-43331182)
chr2 (21-84)||(14941363-14941427)
chr2 (43-90)||(39819272-39819319)
chr2 (18-90)||(9723606-9723679)
chr2 (21-86)||(21393483-21393547)
chr2 (21-84)||(21936085-21936149)
chr2 (21-84)||(9293573-9293637)
chr2 (63-92)||(21936313-21936342)
chr2 (24-76)||(22591494-22591547)
chr2 (21-84)||(9723409-9723473)
chr2 (25-76)||(13354858-13354910)
chr2 (21-84)||(23268059-23268123)
chr2 (21-76)||(27847644-27847700)
chr2 (49-88)||(27847791-27847831)
chr2 (21-76)||(31174831-31174887)
chr2 (60-88)||(34320963-34320991)
chr2 (22-58)||(37335744-37335780)
chr2 (21-84)||(43330916-43330980)
[»] scaffold0096 (2 HSPs)
scaffold0096 (18-89)||(41210-41281)
scaffold0096 (21-84)||(41015-41079)
[»] scaffold0228 (5 HSPs)
scaffold0228 (18-88)||(26136-26206)
scaffold0228 (18-88)||(16184-16254)
scaffold0228 (21-76)||(8414-8470)
scaffold0228 (21-76)||(15996-16052)
scaffold0228 (21-76)||(25948-26004)
[»] chr6 (23 HSPs)
chr6 (18-88)||(17175816-17175886)
chr6 (18-88)||(23290876-23290946)
chr6 (18-88)||(33696897-33696967)
chr6 (19-88)||(17705264-17705333)
chr6 (18-90)||(33695119-33695191)
chr6 (18-89)||(18365368-18365439)
chr6 (18-89)||(18370632-18370703)
chr6 (21-88)||(28675351-28675418)
chr6 (21-90)||(2309216-2309285)
chr6 (18-88)||(32702405-32702475)
chr6 (18-86)||(6031537-6031605)
chr6 (21-86)||(11548386-11548451)
chr6 (22-87)||(34238883-34238948)
chr6 (25-88)||(29693652-29693716)
chr6 (21-90)||(582520-582591)
chr6 (34-90)||(2121002-2121059)
chr6 (21-84)||(33695324-33695388)
chr6 (21-84)||(33696700-33696764)
chr6 (18-57)||(18889470-18889509)
chr6 (22-84)||(25986934-25986997)
chr6 (21-57)||(9752242-9752278)
chr6 (21-84)||(18365570-18365634)
chr6 (21-84)||(18370834-18370898)
[»] scaffold0085 (2 HSPs)
scaffold0085 (18-91)||(48049-48122)
scaffold0085 (21-84)||(47854-47918)
[»] scaffold0178 (2 HSPs)
scaffold0178 (18-89)||(11821-11892)
scaffold0178 (21-84)||(11625-11689)
[»] scaffold0471 (1 HSPs)
scaffold0471 (18-86)||(13042-13110)
[»] scaffold0041 (1 HSPs)
scaffold0041 (22-89)||(85577-85643)


Alignment Details
Target: chr5 (Bit Score: 156; Significance: 1e-82; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 248 - 425
Target Start/End: Complemental strand, 16968688 - 16968514
Alignment:
Q  248 atgaagcattgcgcttaataaaatactaccgtcaaacatcaaggccacaattcagtcaacaaccacaaaaacacatagtaacatttaatagtaataccaa 347  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||    
T  16968688 atgaagcattgcgcttaataaaatactaccgtcaaacatcaaggccacaattcagtcaacaaccacaaaaacacata---acatttaatagtaataccaa 16968592  T
Q  348 gaggttgtaacctataagcatcattttaggcatatcaatggacattgagccaaacaatagcaagggaatgtccatcct 425  Q
     |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16968591 caggttgtaacctctaagcatcattttaggcatatcaatggacattgagccaaacaatagcaagggaatgtccatcct 16968514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 8145573 - 8145644
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcca 89  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8145573 aaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcca 8145644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 33584194 - 33584122
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttccat 90  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  33584194 aaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccat 33584122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 4892402 - 4892472
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4892402 aaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 4892472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 14138867 - 14138937
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14138867 aaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttcc 14138937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 37321658 - 37321588
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  37321658 aaaggtgattattgtgccatttcattcttgaatatttcttataaaatcattcttgatatctagcattttcc 37321588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 6043377 - 6043305
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttccat 90  Q
    |||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  6043377 aaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttccat 6043305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 3521872 - 3521802
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  3521872 aaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 3521802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 25398438 - 25398508
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  25398438 aaaggtgattattgtgccatgtcattgttgaatttttcttataaaatcattcttgatatctagcattttcc 25398508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 2477836 - 2477907
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcca 89  Q
    ||||||||| |||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  2477836 aaaggtgatcattgtgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttcca 2477907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 12851002 - 12851069
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattt 85  Q
    ||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  12851002 aaaggtggttattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattt 12851069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 22912919 - 22912852
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    ||||||||||||||||| |||||||||||||||||||   ||||||||||||||||||||||||||||    
T  22912919 ggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 22912852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 38899591 - 38899517
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcattttccatt 91  Q
    ||||||| |||||||||||| |||||||||||| ||| || ||||||||||||||||||||||||||||||||||    
T  38899591 aaaggtggttattgtgccatgtcattcttgaatttttttttataaaatcattcttgatatctagcattttccatt 38899517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 3362979 - 3363048
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttc 87  Q
    ||||||| |||||||| ||| |||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  3362979 aaaggtggttattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 3363048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 12614603 - 12614532
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||||||| |||||||| ||||||| || |||||||||| ||||||||||||||||||||    
T  12614603 aaaggtgattattgtgccatgtcattcttaaatcttttttgataaaatcatacttgatatctagcattttcc 12614532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 11360996 - 11360947
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcat 67  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  11360996 aaagatgattattgtgccatgtcattcttgaatctttcttataaaatcat 11360947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 17545542 - 17545477
Alignment:
Q  23 tgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    ||||||||||| ||| |||||||| ||| ||| ||   ||||||||||||||||||||||||||||    
T  17545542 tgattattgtgtcatgtcattcttaaatattttttgataaatcattcttgatatctagcattttcc 17545477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 4434004 - 4434068
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| ||||||||||||||||||  |||||| | |||||| |||||||||| |||||||    
T  4434004 ggtgattattctgccatatcattcttgaaattttcttaaaaaaatctttcttgatatatagcatt 4434068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 12614730 - 12614794
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| || ||| ||||||||||||||||||| |||||||  |||||||||| |||||||    
T  12614730 ggtgattattatgtcatgtcattcttgaatctttcttgataaaatatttcttgatatatagcatt 12614794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 22913051 - 22913115
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| |||||| |||||||||||| |||||| | |||||| |||||||||| |||||||    
T  22913051 ggtgattattctgccatgtcattcttgaatttttcttgaaaaaatctttcttgatatatagcatt 22913115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 10458468 - 10458409
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatat 76  Q
    ||||||||||||| |||||| |||||||||||| |||||| |||||||  ||||||||||    
T  10458468 aaaggtgattattttgccatgtcattcttgaatttttcttgataaaatttttcttgatat 10458409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 6043508 - 6043572
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| | |||| |||||||||||  |||||| |||||||| |||||||||| |||||||    
T  6043508 ggtgattattcttccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 6043572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 8145443 - 8145387
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatat 76  Q
    |||||||||| |||||| |||||||||||  |||||| |||||||| ||||||||||    
T  8145443 ggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8145387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 86
Target Start/End: Original strand, 12614483 - 12614511
Alignment:
Q  58 ataaaatcattcttgatatctagcatttt 86  Q
    |||||||||||||||||||||||||||||    
T  12614483 ataaaatcattcttgatatctagcatttt 12614511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 2e-31; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 10044548 - 10044621
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttccatt 91  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10044548 aaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttccatt 10044621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 37985921 - 37985851
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37985921 aaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 37985851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 17841715 - 17841643
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttccat 90  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  17841715 aaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccat 17841643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 3596906 - 3596835
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcca 89  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  3596906 aaaggtgattattgtgccatatcattcttaaatttttcttataaaatcattcttgatatctagcattttcca 3596835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 1503708 - 1503638
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  1503708 aaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 1503638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 26041978 - 26041908
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  26041978 aaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 26041908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 40779994 - 40779924
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  40779994 aaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 40779924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 14129059 - 14129128
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttc 87  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14129059 aaaggtgattattgtgccatgtcattcttgaatatttcttataaaatcattcttgatatctagcattttc 14129128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 20091663 - 20091598
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcatttt 86  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20091663 ggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 20091598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 34665584 - 34665649
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcatttt 86  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34665584 ggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 34665649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 24211237 - 24211169
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcatttt 86  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24211237 aaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcatttt 24211169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 1645829 - 1645759
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||    
T  1645829 aaaggtgattattgtgccatgtcattcttggttctttcttataaaatcattcttgatatctagcattttcc 1645759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 6108098 - 6108028
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  6108098 aaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 6108028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 15187760 - 15187830
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    ||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15187760 aaaggtgattattgtgctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcc 15187830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 42754907 - 42754833
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttccatta 92  Q
    ||||||||||||||| |||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  42754907 aaaggtgattattgtaccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttccatta 42754833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 25581104 - 25581031
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttccatt 91  Q
    ||||||||||||||||  || |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  25581104 aaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccatt 25581031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 30055719 - 30055788
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttccat 90  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  30055719 ggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttccat 30055788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 31347641 - 31347571
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||||||| |||||||||||||||||||   ||||||||||||||||||||||||||||    
T  31347641 aaaggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 31347571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 32064946 - 32065016
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||| ||| |||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  32064946 aaaggtgattattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 32065016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 3890477 - 3890412
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcattt 85  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3890477 ggtgattattctgccatatcattcttgaatctttcttgataaaatcattcttgatatctagcattt 3890412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 38017140 - 38017201
Alignment:
Q  25 attattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcatttt 86  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  38017140 attattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 38017201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 35353241 - 35353299
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatat 76  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  35353241 aaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatat 35353299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 39772667 - 39772608
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatc 77  Q
    |||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||    
T  39772667 aaaggtgattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatc 39772608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 37132543 - 37132477
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 86  Q
    ||||||||||||| ||| |||||| |||||||||||| |||||||||||||||||||||||||||||    
T  37132543 ggtgattattgtgtcatgtcattcatgaatctttcttgataaaatcattcttgatatctagcatttt 37132477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 24844722 - 24844653
Alignment:
Q  22 gtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcattttccat 90  Q
    ||||||||| ||||||  ||||||| |||||||||| ||||||||||| |||||||||| ||||||||||    
T  24844722 gtgattattttgccatgccattcttaaatctttcttgataaaatcattattgatatctaacattttccat 24844653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 7022185 - 7022249
Alignment:
Q  24 gattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||| | | |||||||||||||||||||   |||||||| |||||||||||||||||||    
T  7022185 gattattgtgacttgtcattcttgaatctttcttgataaatcattgttgatatctagcattttcc 7022249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 30834918 - 30834850
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 88  Q
    |||| ||||| || ||| |||||||| |||||||||| |||||||||||||||||||||| ||||||||    
T  30834918 ggtggttattctgtcatgtcattctttaatctttcttgataaaatcattcttgatatctatcattttcc 30834850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 32394057 - 32394114
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatat 76  Q
    ||||||||||||||||| || |||||||| ||| ||| |||||||||||||||||||||    
T  32394057 aaaggtgattattgtgc-atgtcattcttaaatattttttataaaatcattcttgatat 32394114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 8454033 - 8454078
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaa 63  Q
    |||||||||||||||||||| ||||||||||||  |||||||||||    
T  8454033 aaaggtgattattgtgccatgtcattcttgaattcttcttataaaa 8454078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 7022046 - 7021990
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatat 76  Q
    |||||||||| ||||||||||||||||||| |||||| | |||||| ||||||||||    
T  7022046 ggtgattattctgccatatcattcttgaatttttcttgagaaaatctttcttgatat 7021990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 15187624 - 15187564
Alignment:
Q  25 attattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  15187624 attattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15187564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 27782114 - 27782178
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| |||||| ||||| ||||||||||||| |||||||  |||||||||| |||||||    
T  27782114 ggtgattattctgccatgtcattattgaatctttcttgataaaatatttcttgatatatagcatt 27782178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 32064813 - 32064749
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| |||||| |||||||||||  |||||| |||||||| |||||||||| |||||||    
T  32064813 ggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 32064749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 34665450 - 34665386
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| |||||| |||||||||||  |||||| |||||||| |||||||||| |||||||    
T  34665450 ggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 34665386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 1886621 - 1886672
Alignment:
Q  26 ttattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatat 76  Q
    ||||| |||||  ||||||||||||||||||| |||||||||||||||||||    
T  1886621 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 1886672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 7017702 - 7017653
Alignment:
Q  39 tcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||| ||| ||||||   ||||||||||||||||||||||||||||    
T  7017702 tcattcttaaatatttcttgataaatcattcttgatatctagcattttcc 7017653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 17841847 - 17841911
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| |||||| |||||||||||  |||||| | |||||| |||||||||| |||||||    
T  17841847 ggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 17841911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 20091798 - 20091862
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| |||||| |||||||||||  |||||| |||||||  |||||||||| |||||||    
T  20091798 ggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 20091862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 31347779 - 31347843
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| |||||| |||||||||||| |||||| | |||||  |||||||||| |||||||    
T  31347779 ggtgattattctgccatgtcattcttgaatttttcttgagaaaatatttcttgatatatagcatt 31347843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 38017039 - 38016983
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatat 76  Q
    |||||||||| |||||| |||||||||||  |||||| |||||||| ||||||||||    
T  38017039 ggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 38016983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 40780126 - 40780190
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| |||||| |||||||||||  |||||| | |||||| |||||||||| |||||||    
T  40780126 ggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 40780190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 41819630 - 41819594
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt 57  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  41819630 ggtgattattgtgtcatgtcattcttgaatctttctt 41819594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 41819775 - 41819831
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatat 76  Q
    |||||||||| ||||||||||||||| || | ||||| |||||||| ||||||||||    
T  41819775 ggtgattattctgccatatcattcttaaaacattcttgataaaatctttcttgatat 41819831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 42755039 - 42755095
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatat 76  Q
    |||||||||| |||||| |||||||||||  |||||| |||||||| ||||||||||    
T  42755039 ggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 42755095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 4596 - 4670
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttccatta 92  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  4596 aaaggtgattattgtgccatatcattcttaaatttttcttataaaatcattcttgatatctagcattttccatta 4670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 1e-29; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 10442652 - 10442582
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10442652 aaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 10442582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 36073549 - 36073622
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttccatt 91  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  36073549 aaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccatt 36073622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 22199459 - 22199529
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22199459 aaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcc 22199529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 46442044 - 46442114
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  46442044 aaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 46442114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 44893626 - 44893698
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttccat 90  Q
    |||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  44893626 aaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttccat 44893698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 21802182 - 21802115
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21802182 ggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 21802115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 7744977 - 7744907
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  7744977 aaaggtgattattgtgcaatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 7744907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 33530549 - 33530479
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  33530549 aaaggtgattattgtgccatgtcattcttggatcttttttataaaatcattcttgatatctagcattttcc 33530479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 44893078 - 44893008
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  44893078 aaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 44893008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 47290266 - 47290336
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    ||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  47290266 aaaggtgattattgtaccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 47290336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 53123231 - 53123301
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  53123231 aaagatgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 53123301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 9089070 - 9089138
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcatttt 86  Q
    |||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  9089070 aaagatgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 9089138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 2625037 - 2625107
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    ||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  2625037 aaaggtgattattgtgctatgtcatttttgaatctttcttataaaatcattcttgatatctaacattttcc 2625107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 31078684 - 31078614
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||| ||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  31078684 aaagatgattattgtgccatgtcattcttgaattttttttataaaatcattcttgatatctagcattttcc 31078614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 36073151 - 36073221
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    ||||||| |||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  36073151 aaaggtggttattgtgccatgtcattcttgaatttttcttataaaatcatttttgatatctagcattttcc 36073221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 49387752 - 49387682
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||| ||||||||    
T  49387752 aaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcatccttgatatctaacattttcc 49387682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 4751647 - 4751717
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    ||||||| |||||||||||| |||||||| ||| ||||||||||||| |||||||||||||||||||||||    
T  4751647 aaaggtggttattgtgccatgtcattcttaaatttttcttataaaattattcttgatatctagcattttcc 4751717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 25063436 - 25063367
Alignment:
Q  22 gtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcattttccat 90  Q
    ||||||||| | |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25063436 gtgattattctaccatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttccat 25063367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 50156443 - 50156374
Alignment:
Q  19 aaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||| || ||| |||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  50156443 aaggtgattattatgtcatgtcattcttgaatttttcttataaaatcattcttgatatctaacattttcc 50156374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 11314114 - 11314046
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 88  Q
    ||||||||||||| ||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  11314114 ggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttgatatctagcattttcc 11314046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 24128439 - 24128507
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcatttt 86  Q
    |||||| ||||||||| ||| |||||||| ||| |||||||||||||||||||||||||||||||||||    
T  24128439 aaaggtaattattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcatttt 24128507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 23964329 - 23964269
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatct 78  Q
    |||| |||||||| |||||| |||||||| |||||||||||||||||||||||||||||||    
T  23964329 aaagatgattattatgccatgtcattcttaaatctttcttataaaatcattcttgatatct 23964269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 37219836 - 37219902
Alignment:
Q  23 tgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 88  Q
    |||||||| |||||| |||||||| |||||||||| |||||||||||||||||||||| ||||||||    
T  37219836 tgattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctaacattttcc 37219902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 42671873 - 42671939
Alignment:
Q  23 tgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 88  Q
    |||||||| || ||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  42671873 tgattattatgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctaacattttcc 42671939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 17655630 - 17655699
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 86  Q
    |||||| |||||| || ||| |||||||| |||||||||| |||||||||||||| ||||||||||||||    
T  17655630 aaaggtaattattatgtcatgtcattcttaaatctttcttgataaaatcattcttaatatctagcatttt 17655699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 33530685 - 33530749
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| |||||| |||||||||||| |||||| |||||||| |||||||||| |||||||    
T  33530685 ggtgattattctgccatgtcattcttgaatttttcttgataaaatctttcttgatatatagcatt 33530749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 37934804 - 37934736
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 88  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||||||| || | ||||||| ||||||||    
T  37934804 ggtgattattgtgtcatatcattattgaatctttcttaataaaatcagtcataatatctaacattttcc 37934736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 23 - 86
Target Start/End: Original strand, 24392879 - 24392942
Alignment:
Q  23 tgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcatttt 86  Q
    |||||||||||| || |||||||| ||| ||||||   ||||||||||||||||||||||||||    
T  24392879 tgattattgtgctatgtcattcttaaatatttcttgataaatcattcttgatatctagcatttt 24392942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 36073320 - 36073253
Alignment:
Q  25 attattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcattttccatt 91  Q
    |||||| || |||||||||||| |||||||||| ||||||||||| ||  ||||||||||||||||||    
T  36073320 attattctggcatatcattcttaaatctttcttgataaaatcatttttagtatctagcattttccatt 36073253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 2624905 - 2624841
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| |||||| |||||||||||  |||||| |||||||| |||||||||| |||||||    
T  2624905 ggtgattattctgccatttcattcttgaaattttcttgataaaatctttcttgatatatagcatt 2624841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 10442786 - 10442850
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| |||||| |||||||||||  |||||| |||||||| |||||||||| |||||||    
T  10442786 ggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 10442850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 24392735 - 24392671
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| |||||| |||||||||||| |||||| | |||||| |||||||||| |||||||    
T  24392735 ggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcatt 24392671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 31078816 - 31078880
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| |||||| |||||||||||  |||||| |||||||| |||||||||| |||||||    
T  31078816 ggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 31078880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 49387885 - 49387949
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| |||||| |||||||||||  |||||| |||||||| |||||||||| |||||||    
T  49387885 ggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 49387949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 22199327 - 22199265
Alignment:
Q  23 tgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||| |||||| |||||||||||  |||||| |||||||| |||||||||| |||||||    
T  22199327 tgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 22199265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 53999020 - 53998975
Alignment:
Q  48 aatctttctt-ataaaatcattcttgatatctagcattttccatta 92  Q
    |||||||||| ||||||||||||||||||||||  |||||||||||    
T  53999020 aatctttcttgataaaatcattcttgatatctaatattttccatta 53998975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 21802319 - 21802383
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| |||||| |||||||||||  |||||| |||||||  |||||||||| |||||||    
T  21802319 ggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 21802383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 36073015 - 36072951
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||| ||||| |||||| |||||||||||  |||||| |||||||| |||||||||| |||||||    
T  36073015 ggtggttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 36072951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 36073418 - 36073354
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| |||||| |||||||||||  |||||| | |||||| |||||||||| |||||||    
T  36073418 ggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 36073354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 46441912 - 46441848
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| |||||| |||||||||||  |||||| | |||||| |||||||||| |||||||    
T  46441912 ggtgattattttgccatgtcattcttgaaattttcttaaaaaaatctttcttgatatatagcatt 46441848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 47290134 - 47290070
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| |||||| |||||||||||  |||||| | |||||| |||||||||| |||||||    
T  47290134 ggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 47290070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 1e-29; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 33113994 - 33114064
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33113994 aaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 33114064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 30385600 - 30385672
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttccat 90  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  30385600 aaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatttagcattttccat 30385672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 3137279 - 3137209
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3137279 aaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 3137209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 6042077 - 6042147
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  6042077 aaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcc 6042147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 22426206 - 22426140
Alignment:
Q  22 gtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22426206 gtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 22426140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 34482753 - 34482683
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  34482753 aaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 34482683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 37216918 - 37216848
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37216918 aaaggtgattattgtaccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 37216848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 8320447 - 8320378
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttc 87  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8320447 aaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattattgatatctagcattttc 8320378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 2754919 - 2754991
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttccat 90  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  2754919 aaaggtgattattgtgccatgtcattcttaaatctttcttataaaatgattcttgatatctagcattttccat 2754991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 19650765 - 19650693
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttccat 90  Q
    |||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19650765 aaaggtgattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatctagcattttccat 19650693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 3089619 - 3089690
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcca 89  Q
    |||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  3089619 aaaggtgattattgtgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttcca 3089690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 33145915 - 33145980
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcatttt 86  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  33145915 ggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 33145980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 3574389 - 3574321
Alignment:
Q  20 aggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3574389 aggtgattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcc 3574321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 37522253 - 37522324
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcca 89  Q
    ||||||||||||| |||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  37522253 aaaggtgattattatgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcca 37522324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 3456264 - 3456334
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||| |||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3456264 aaagatgattagtgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 3456334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 47738316 - 47738385
Alignment:
Q  23 tgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcattttccatt 91  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  47738316 tgattattgtgccatgtcattcttgaatctttcttgataaaatcattcttgatatctaacattttccatt 47738385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 40328034 - 40328102
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 88  Q
    ||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  40328034 ggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttcc 40328102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 48161106 - 48161176
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||| ||| || |||||| || |||||||||||||||||||||||||||||||||||||    
T  48161106 aaaggtgattattgtgtcatgtcgttcttggatatttcttataaaatcattcttgatatctagcattttcc 48161176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 36864895 - 36864827
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 88  Q
    ||||||||||||| ||| |||||||||||||||| || |||||||||||||||||||||||||||||||    
T  36864895 ggtgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcttgatatctagcattttcc 36864827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 41224437 - 41224504
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    ||||||||||||||||| |||||||||||| ||||||   ||||||||||||||||||||||||||||    
T  41224437 ggtgattattgtgccatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttcc 41224504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 9796890 - 9796824
Alignment:
Q  22 gtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||| ||| |||||||||||||||||||   ||||||||||||||||||||||||||||    
T  9796890 gtgattattgtgacatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 9796824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 26612949 - 26613019
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcattttccat 90  Q
    ||||||||||||||||| | ||||||||||||||||| ||||||||||| |||||||||| ||||||||||    
T  26612949 ggtgattattgtgccatgttattcttgaatctttcttaataaaatcattattgatatctaacattttccat 26613019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 8361901 - 8361834
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    ||||||||||||| ||| |||||||||||| ||||||   ||||||||||||||||||||||||||||    
T  8361901 ggtgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttcc 8361834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 33839738 - 33839794
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatat 76  Q
    ||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||    
T  33839738 ggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatat 33839794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 46919096 - 46919164
Alignment:
Q  20 aggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcattttc 87  Q
    ||||||||||| |||||| ||||| |||||||||| || |||||||||||||||||||||| |||||||    
T  46919096 aggtgattattctgccatgtcattattgaatcttttttgataaaatcattcttgatatctaacattttc 46919164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 39 - 92
Target Start/End: Original strand, 24343770 - 24343824
Alignment:
Q  39 tcattcttgaatctttctt-ataaaatcattcttgatatctagcattttccatta 92  Q
    |||||||||||||||| || |||||||||||||||||||||| ||||||||||||    
T  24343770 tcattcttgaatcttttttgataaaatcattcttgatatctaacattttccatta 24343824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 42921328 - 42921394
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 86  Q
    ||||||| ||||||||| |||||||| ||| |||||| |||||||||||||| ||||||||||||||    
T  42921328 ggtgattgttgtgccatgtcattcttaaatatttcttgataaaatcattcttaatatctagcatttt 42921394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 47738176 - 47738117
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatat 76  Q
    |||||| |||||| ||||||||||||||||||| |||||| |||||||| ||||||||||    
T  47738176 aaaggtaattattctgccatatcattcttgaatatttcttgataaaatctttcttgatat 47738117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 3456132 - 3456068
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  3456132 ggtgattattctgccatatcattcttaaaattttcttgataaaatctttcttgatatatagcatt 3456068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 48160973 - 48160909
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  48160973 ggtgattattctgccatatcattcttaaaattttcttgataaaatctttcttgatatatagcatt 48160909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 2754788 - 2754721
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    ||||||||||||| |||||| |||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  2754788 aaaggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 2754721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 91
Target Start/End: Original strand, 42298092 - 42298125
Alignment:
Q  58 ataaaatcattcttgatatctagcattttccatt 91  Q
    ||||||||||||||||||| ||||||||||||||    
T  42298092 ataaaatcattcttgatatttagcattttccatt 42298125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 3137411 - 3137475
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| |||||| |||||||||||  |||||| | |||||| |||||||||| |||||||    
T  3137411 ggtgattattttgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 3137475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 6041952 - 6041888
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| || ||| |||||||||||  |||||| |||||||| |||||||||| |||||||    
T  6041952 ggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 6041888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 8320581 - 8320637
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatat 76  Q
    |||||||||| ||||||||||||||| ||  |||||| |||||||| ||||||||||    
T  8320581 ggtgattattttgccatatcattcttaaaattttcttgataaaatctttcttgatat 8320637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 9797026 - 9797082
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatat 76  Q
    |||||||||| |||||| |||||||||||| |||||| | |||||| ||||||||||    
T  9797026 ggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatat 9797082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 34482907 - 34482971
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| | ||||||||||||||||  |||||| | |||||| |||||||||| |||||||    
T  34482907 ggtgattattctaccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 34482971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 41883087 - 41883031
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttga 73  Q
    |||| |||||||| | |||| ||||||||||||||||||| ||||||||||| ||||    
T  41883087 aaagatgattattttaccatgtcattcttgaatctttcttcataaaatcatttttga 41883031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 1e-29; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 20304995 - 20304925
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20304995 aaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 20304925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 40215188 - 40215257
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttc 87  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40215188 aaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 40215257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 3559817 - 3559887
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3559817 aaaggtgattattgtgtcatatcattcttggatctttcttataaaatcattcttgatatctagcattttcc 3559887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 25463876 - 25463946
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  25463876 aaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcc 25463946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 51737705 - 51737775
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  51737705 aaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 51737775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 25973607 - 25973679
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttccat 90  Q
    |||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  25973607 aaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccat 25973679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 9910156 - 9910085
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcca 89  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  9910156 aaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctaacattttcca 9910085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 19722964 - 19722893
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcca 89  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19722964 aaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcca 19722893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 37821699 - 37821628
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcca 89  Q
    |||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37821699 aaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcca 37821628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 18404652 - 18404718
Alignment:
Q  22 gtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18404652 gtgattattgtgccatgtcattcttaaatctttcttataaaatcattcttgatatctagcattttcc 18404718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 19015604 - 19015674
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  19015604 aaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatgtagcattttcc 19015674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 36966573 - 36966503
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||    
T  36966573 aaaggtgattattgtgccatgttattcttgaatttttcttataaaatcattcttgatatctagcattttcc 36966503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 41876307 - 41876237
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    ||||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  41876307 aaaggtgattattgtgctatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 41876237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 44094897 - 44094975
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttccattaactat 97  Q
    |||||||||||||||| ||| ||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  44094897 aaaggtgattattgtgtcatgtcattcttggatctttcttataaaataattcttgatatctagcattttcc-ttaactat 44094975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 6883687 - 6883757
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||| |||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  6883687 aaaggtgaatattatgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 6883757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 32000128 - 32000059
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttccat 90  Q
    ||||||||||||||||| |||||||||||||||||||   ||||||||||||||||||||||||||||||    
T  32000128 ggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttccat 32000059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 33786493 - 33786426
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    ||||||||||||||||| |||||||||||||||||||   ||||||||||||||||||||||||||||    
T  33786493 ggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 33786426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 33786632 - 33786696
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattt 85  Q
    ||||||||||||||||| |||||||||||||||||||   |||||||||||||||||||||||||    
T  33786632 ggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattt 33786696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 40273911 - 40273976
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcatttt 86  Q
    ||||||||||||||||| |||||||||||| ||||||   ||||||||||||||||||||||||||    
T  40273911 ggtgattattgtgccatgtcattcttgaatatttcttgataaatcattcttgatatctagcatttt 40273976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 44690884 - 44690818
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 86  Q
    |||||||||| |||||| ||||||||||||||||||| ||||||||||| |||||||||| ||||||    
T  44690884 ggtgattattctgccatgtcattcttgaatctttcttgataaaatcattattgatatctaacatttt 44690818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 52064440 - 52064373
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcattttc 87  Q
    ||||| |||| || ||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  52064440 ggtgaatattctgtcatgtcattcttgaatctttcttgataaaatcatttttgatatctagcattttc 52064373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 27523118 - 27523050
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 88  Q
    |||||||| | |||||||  ||||||||||||||||| ||||||||||||||||||| || ||||||||    
T  27523118 ggtgattaatctgccatacgattcttgaatctttcttgataaaatcattcttgatatataacattttcc 27523050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 16045795 - 16045859
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| |||||| |||||||||||  |||||| |||||||| |||||||||| |||||||    
T  16045795 ggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 16045859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 19015472 - 19015408
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| ||||||||||||||||||  |||||| | |||||| |||||||||| |||||||    
T  19015472 ggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 19015408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 36966705 - 36966769
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| ||||||||||||||||||  |||||| | |||||| |||||||||| |||||||    
T  36966705 ggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 36966769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 37821831 - 37821895
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| ||||||||||||||||||  |||||| | |||||| |||||||||| |||||||    
T  37821831 ggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 37821895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 40215056 - 40214992
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| |||||| |||||||||||  |||||| |||||||| |||||||||| |||||||    
T  40215056 ggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 40214992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 40273770 - 40273706
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| || ||| |||||||||||| |||||| | |||||| ||||||||||||||||||    
T  40273770 ggtgattattttgacatgtcattcttgaatttttcttgaaaaaatctttcttgatatctagcatt 40273706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 10167599 - 10167675
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcattttccattaa 93  Q
    |||||||||||||||  ||||| |||||| ||| ||| || |||||||||||||| |||| || |||||||| ||||    
T  10167599 aaaggtgattattgtatcatattattcttaaatatttttttataaaatcattcttaatatgtaacattttcctttaa 10167675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 44094766 - 44094702
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| |||||| |||||||||||  |||||| |||||||  |||||||||| |||||||    
T  44094766 ggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 44094702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 2e-28; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 24395171 - 24395243
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttccat 90  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24395171 aaaggtgattattgtgccatgtcattcttgaatcttttttataaaatcattcttgatatctagcattttccat 24395243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 25167721 - 25167651
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  25167721 aaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 25167651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 34483038 - 34483108
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  34483038 aaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 34483108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 35445597 - 35445667
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  35445597 aaaggtgattattgtgtcatatcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 35445667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 45637911 - 45637981
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  45637911 aaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttcc 45637981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 30848769 - 30848842
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttccatt 91  Q
    |||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  30848769 aaaggtgattattgtgccatgtcattcttgaatttttcttataaaagcattcttgatatctagcattttccatt 30848842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 3962178 - 3962248
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||    
T  3962178 aaaggtgattattgtgccatgtcattcttggatatttcttataaaatcattcttgatatctagcattttcc 3962248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 15577712 - 15577642
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15577712 aaaggtgattattgtgacatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcc 15577642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 42612011 - 42612081
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  42612011 aaaggtgattattgtgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttcc 42612081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 48880788 - 48880722
Alignment:
Q  22 gtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  48880788 gtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 48880722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 4974597 - 4974532
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcatttt 86  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  4974597 ggtgattattgtgccatgtcattcttgaatcttttttataaaatcattcttgatatctagcatttt 4974532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 15329478 - 15329544
Alignment:
Q  22 gtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  15329478 gtgattattgtgccatgtcattcttgaatatttcttataaaatcattctttatatctagcattttcc 15329544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 35876444 - 35876518
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttccatta 92  Q
    |||||||||||||||||||| ||||| ||  || |||||||||||||||||||||||||||||||||||||||||    
T  35876444 aaaggtgattattgtgccatgtcatttttagatatttcttataaaatcattcttgatatctagcattttccatta 35876518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 37476942 - 37476876
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttc 87  Q
    ||||||||||||||||| ||||| || ||||||||||   |||||||||||||||||||||||||||    
T  37476942 ggtgattattgtgccatgtcattattaaatctttcttgataaatcattcttgatatctagcattttc 37476876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 18037180 - 18037247
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||| |||| |||||||| ||||||||||   |||||||| |||||||||||||||||||    
T  18037180 ggtgattattgtaccatgtcattcttaaatctttcttgataaatcattgttgatatctagcattttcc 18037247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 86
Target Start/End: Complemental strand, 20009959 - 20009895
Alignment:
Q  23 tgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 86  Q
    ||||||||||| ||| |||||||||||||||| || |||||||||||| ||||||||| ||||||    
T  20009959 tgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcatgatatctatcatttt 20009895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 36790336 - 36790268
Alignment:
Q  24 gattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcattttccatt 91  Q
    |||||||||| ||| |||||||||||||||| || |||||| |||| ||||||| ||||||||||||||    
T  36790336 gattattgtgtcatgtcattcttgaatctttgttgataaaaccattattgatatttagcattttccatt 36790268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 42696286 - 42696354
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||| |||| |||||||||||| ||| || ||||||||||| |||||||||| ||||||||    
T  42696286 ggtgattattgtaccatgtcattcttgaattttttttgataaaatcattattgatatctaacattttcc 42696354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 29737347 - 29737406
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatcta 79  Q
    ||||||||||||| ||| | |||||| |||||||||| ||||||||||||||||||||||    
T  29737347 ggtgattattgtgacatgttattcttaaatctttcttgataaaatcattcttgatatcta 29737406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 40880706 - 40880640
Alignment:
Q  22 gtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcca 89  Q
    |||||||||||||||| | ||| || ||||||||  || |||||||||||||||||||||||||||||    
T  40880706 gtgattattgtgccatgttattttttaatctttca-atcaaatcattcttgatatctagcattttcca 40880640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 15238589 - 15238654
Alignment:
Q  23 tgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    ||||||||||| ||| |||||||| ||| ||| ||   ||||||||||||||||||||||||||||    
T  15238589 tgattattgtgtcatgtcattcttaaatattttttgataaatcattcttgatatctagcattttcc 15238654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 4974732 - 4974796
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| |||||| |||||||||||  |||||| |||||||| |||||||||| |||||||    
T  4974732 ggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 4974796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 15577847 - 15577911
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| |||||| |||||||||||  |||||| |||||||| |||||||||| |||||||    
T  15577847 ggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15577911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 42611879 - 42611815
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| |||||| |||||||||||  |||||| |||||||| |||||||||| |||||||    
T  42611879 ggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 42611815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 45637780 - 45637716
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| |||||| |||||||||||  |||||| |||||||| |||||||||| |||||||    
T  45637780 ggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 45637716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 54
Target Start/End: Original strand, 20953116 - 20953149
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatcttt 54  Q
    |||||||||| |||||||||||||||||||||||    
T  20953116 ggtgattattttgccatatcattcttgaatcttt 20953149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 15329341 - 15329277
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| || ||| |||||||||||  |||||| |||||||| |||||||||| |||||||    
T  15329341 ggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15329277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 48880924 - 48880988
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| || ||| |||||||||||  |||||| |||||||| |||||||||| |||||||    
T  48880924 ggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 48880988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 2e-28; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 33380407 - 33380479
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttccat 90  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  33380407 aaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccat 33380479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 35160959 - 35161030
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcca 89  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  35160959 aaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcca 35161030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 9293437 - 9293367
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttccatt 91  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9293437 ggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttccatt 9293367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 10662088 - 10662162
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttccatta 92  Q
    |||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  10662088 aaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccatta 10662162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 7475373 - 7475300
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttccatt 91  Q
    ||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  7475373 aaaggtgattattatgtcatatcattcttgaatttttcttataaaatcattcttgatatctagcattttccatt 7475300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 13355052 - 13355123
Alignment:
Q  22 gtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttccattaa 93  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  13355052 gtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcctttaa 13355123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 23267927 - 23267857
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  23267927 aaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 23267857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 22592915 - 22592983
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 88  Q
    ||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  22592915 ggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttcc 22592983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 31174692 - 31174633
Alignment:
Q  26 ttattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattt 85  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31174692 ttattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattt 31174633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 3989276 - 3989342
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcatt 84  Q
    |||||| ||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  3989276 aaaggttattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatctagcatt 3989342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 43331112 - 43331182
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    ||||||||||||||| |||| |||||||||||||||||||   ||||||||||||||||||||||||||||    
T  43331112 aaaggtgattattgtaccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 43331182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 14941363 - 14941427
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| |||||| ||||||||||||||||||| |||||||| |||||||||| |||||||    
T  14941363 ggtgattattctgccatgtcattcttgaatctttcttaataaaatctttcttgatatatagcatt 14941427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 39819272 - 39819319
Alignment:
Q  43 tcttgaatctttcttataaaatcattcttgatatctagcattttccat 90  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||    
T  39819272 tcttgaatttttcttataaaatcattcttgatatctaacattttccat 39819319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 9723606 - 9723679
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcattttccat 90  Q
    ||||||||||||| || ||| |||||||| ||| |||||| || ||||||||||||||||||| ||||||||||    
T  9723606 aaaggtgattattctgtcatgtcattcttaaatatttcttgatcaaatcattcttgatatctaacattttccat 9723679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 21393547 - 21393483
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcatttt 86  Q
    ||||||||||||| ||| |||||||||||| ||||||   ||||||||||||||||||||||||||    
T  21393547 ggtgattattgtgtcatgtcattcttgaat-tttcttgataaatcattcttgatatctagcatttt 21393483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 21936149 - 21936085
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  21936149 ggtgattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcatt 21936085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 9293573 - 9293637
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| |||||| |||||||||||  |||||| |||||||| |||||||||| |||||||    
T  9293573 ggtgattattctgccatgtcattcttgaaaatttcttgataaaatctttcttgatatatagcatt 9293637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 92
Target Start/End: Original strand, 21936313 - 21936342
Alignment:
Q  63 atcattcttgatatctagcattttccatta 92  Q
    ||||||||||||||||||||||||||||||    
T  21936313 atcattcttgatatctagcattttccatta 21936342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 22591547 - 22591494
Alignment:
Q  24 gattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatat 76  Q
    ||||||| ||||||||||||||||||| ||| || |||||||| ||||||||||    
T  22591547 gattattctgccatatcattcttgaattttttttaataaaatctttcttgatat 22591494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 9723473 - 9723409
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| || ||| |||||||| |||||||||| |||||||| ||||| |||| |||||||    
T  9723473 ggtgattattctgtcatgtcattcttaaatctttcttaataaaatctttcttaatatatagcatt 9723409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 13354910 - 13354858
Alignment:
Q  25 attattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatat 76  Q
    |||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  13354910 attattctgccatatcattcttgaaattttcttgataaaatctttcttgatat 13354858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 23268059 - 23268123
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| |||||| |||||||||||  |||||| | |||||| |||||||||| |||||||    
T  23268059 ggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 23268123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 27847700 - 27847644
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatat 76  Q
    |||||||||| || ||| ||||||||||||||||||| |||||||| ||||| ||||    
T  27847700 ggtgattattctgtcatgtcattcttgaatctttcttaataaaatctttctttatat 27847644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 88
Target Start/End: Original strand, 27847791 - 27847831
Alignment:
Q  49 atctttctt-ataaaatcattcttgatatctagcattttcc 88  Q
    ||||||||| ||||||| |||||||||||||||||||||||    
T  27847791 atctttcttgataaaattattcttgatatctagcattttcc 27847831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 31174831 - 31174887
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatat 76  Q
    |||||||||| |||||| |||||||||||  |||||| |||||||| ||||||||||    
T  31174831 ggtgattattctgccatgtcattcttgaaattttcttaataaaatctttcttgatat 31174887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 60 - 88
Target Start/End: Complemental strand, 34320991 - 34320963
Alignment:
Q  60 aaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||||||||||||||||    
T  34320991 aaaatcattcttgatatctagcattttcc 34320963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 37335780 - 37335744
Alignment:
Q  22 gtgattattgtgccatatcattcttgaatctttctta 58  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  37335780 gtgattattctgccatgtcattcttgaatctttctta 37335744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 43330980 - 43330916
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| |||||| |||||||||||| ||| || | |||||| |||||||||| |||||||    
T  43330980 ggtgattattctgccatgtcattcttgaattttttttgagaaaatctttcttgatatatagcatt 43330916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 64; Significance: 8e-28; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 41210 - 41281
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcca 89  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  41210 aaaggtgattattgtaccatatcattcttggatctttcttataaaatcattcttgatatctagcattttcca 41281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 41079 - 41015
Alignment:
Q  21 ggtgattattgtgccatatcattcttg-aatctttcttataaaatcattcttgatatctagcatt 84  Q
    |||||||||| |||||| ||||||||| ||| ||| | |||||||| |||||||||| |||||||    
T  41079 ggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 41015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 63; Significance: 3e-27; HSPs: 5)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 26136 - 26206
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  26136 aaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 26206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 16184 - 16254
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16184 aaagatgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 16254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 8470 - 8414
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatat 76  Q
    |||||||||| |||||| |||||||||||  |||||| |||||||| ||||||||||    
T  8470 ggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 16052 - 15996
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatat 76  Q
    |||||||||| |||||| |||||||||||  |||||| |||||||| ||||||||||    
T  16052 ggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 15996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 26004 - 25948
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatat 76  Q
    |||||||||| |||||| |||||||||||  |||||| |||||||| ||||||||||    
T  26004 ggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 25948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 3e-27; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 17175886 - 17175816
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17175886 aaaggtgattattgtaccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 17175816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 23290946 - 23290876
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  23290946 aaaggtaattattgtgccatatcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 23290876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 33696897 - 33696967
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  33696897 aaaggtgattattgtgccatgtcattcttaaatctttcttataaaatcattcttgatatctagcattttcc 33696967  T

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Target: chr6; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 17705333 - 17705264
Alignment:
Q  19 aaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17705333 aaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 17705264  T

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Target: chr6; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 33695191 - 33695119
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttccat 90  Q
    |||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  33695191 aaaggtgattattgtgacatatcattcttaaatatttcttataaaatcattcttgatatctagcattttccat 33695119  T

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Target: chr6; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 18365439 - 18365368
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcca 89  Q
    ||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18365439 aaaggtgattattgtgctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcca 18365368  T

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Target: chr6; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 18370703 - 18370632
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcca 89  Q
    ||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18370703 aaaggtgattattgtgctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcca 18370632  T

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Target: chr6; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 28675351 - 28675418
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28675351 ggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 28675418  T

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Target: chr6; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 2309285 - 2309216
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttccat 90  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  2309285 ggtgattattgtgccatgtcattcttgaatctttcttataaaatcatcgttgatatctagcattttccat 2309216  T

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Target: chr6; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 32702405 - 32702475
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 88  Q
    |||||| ||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  32702405 aaaggtaattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 32702475  T

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Target: chr6; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 6031605 - 6031537
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcatttt 86  Q
    |||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||| || |||||    
T  6031605 aaaggtgattattgtgccatgtcattcttaaatcttttttataaaatcattcttgatatccagtatttt 6031537  T

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Target: chr6; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 11548451 - 11548386
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcatttt 86  Q
    ||||||||||||||||| ||||||||||||| |||||   ||||||||||||||||||||||||||    
T  11548451 ggtgattattgtgccatgtcattcttgaatcgttcttgataaatcattcttgatatctagcatttt 11548386  T

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Target: chr6; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 34238948 - 34238883
Alignment:
Q  22 gtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttc 87  Q
    |||||||||||| ||| |||||||||||||||  | ||||||||||||||||||||||||||||||    
T  34238948 gtgattattgtgtcatgtcattcttgaatcttcttgataaaatcattcttgatatctagcattttc 34238883  T

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Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 29693652 - 29693716
Alignment:
Q  25 attattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 88  Q
    |||||| |||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  29693652 attattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctagcattttcc 29693716  T

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Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 582591 - 582520
Alignment:
Q  21 ggtgattattgtgcc-atatcattcttgaatctttctta-taaaatcattcttgatatctagcattttccat 90  Q
    |||||||||| |||| ||||||||||| ||| ||||||| ||||||||||||||||||||| ||||||||||    
T  582591 ggtgattattctgcccatatcattcttaaatttttcttaataaaatcattcttgatatctaacattttccat 582520  T

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Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 2121059 - 2121002
Alignment:
Q  34 ccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcattttccat 90  Q
    |||| |||||||||||||||| || ||||||||||| |||||||||| ||||||||||    
T  2121059 ccatgtcattcttgaatctttttttataaaatcatttttgatatctaacattttccat 2121002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 33695324 - 33695388
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| |||||| |||||||||||  |||||| |||||||| |||||||||| |||||||    
T  33695324 ggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 33695388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 33696764 - 33696700
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| |||||| |||||||||||  |||||| |||||||| |||||||||| |||||||    
T  33696764 ggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 33696700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 18889509 - 18889470
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttctt 57  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  18889509 aaaggtgattattgtgccatgtcattcttgaatcattctt 18889470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 25986997 - 25986934
Alignment:
Q  22 gtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    ||||||||| |||||| |||||||||||  |||||| |||||||| |||||||||| |||||||    
T  25986997 gtgattattttgccatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 25986934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 9752242 - 9752278
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt 57  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  9752242 ggtgattattctgccatatcattcttgaatttttctt 9752278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 18365570 - 18365634
Alignment:
Q  21 ggtgattattgtgccatatcattcttg-aatctttcttataaaatcattcttgatatctagcatt 84  Q
    |||||||||| |||||| ||||||||| ||| ||| | |||||||| |||||||||| |||||||    
T  18365570 ggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 18365634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 18370834 - 18370898
Alignment:
Q  21 ggtgattattgtgccatatcattcttg-aatctttcttataaaatcattcttgatatctagcatt 84  Q
    |||||||||| |||||| ||||||||| ||| ||| | |||||||| |||||||||| |||||||    
T  18370834 ggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 18370898  T

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Target: scaffold0085 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 48049 - 48122
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttccatt 91  Q
    |||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48049 aaagatgattattgtgctatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttccatt 48122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 47918 - 47854
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| |||||| |||||||||||  |||||| |||||||| |||||||||  |||||||    
T  47918 ggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgataaatagcatt 47854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 56; Significance: 5e-23; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 11821 - 11892
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcca 89  Q
    |||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||| |||||||||    
T  11821 aaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaacattttcca 11892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 11689 - 11625
Alignment:
Q  21 ggtgattattgtgccatatcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 84  Q
    |||||||||| || ||| |||||||||||  |||||| |||||||| |||||||||| |||||||    
T  11689 ggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 11625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 13042 - 13110
Alignment:
Q  18 aaaggtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcatttt 86  Q
    |||||| ||||||||| ||| |||||||| ||| |||||||||||||||||||||||||||||||||||    
T  13042 aaaggtaattattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcatttt 13110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 85577 - 85643
Alignment:
Q  22 gtgattattgtgccatatcattcttgaatctttcttataaaatcattcttgatatctagcattttcca 89  Q
    |||||||||||||||| | ||| || ||||||||  || |||||||||||||||||||||||||||||    
T  85577 gtgattattgtgccatgttattttttaatctttca-atcaaatcattcttgatatctagcattttcca 85643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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