View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17380_low_65 (Length: 238)

Name: NF17380_low_65
Description: NF17380
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17380_low_65
NF17380_low_65
[»] chr5 (15 HSPs)
chr5 (1-133)||(41334571-41334703)
chr5 (1-127)||(2614563-2614689)
chr5 (1-133)||(18034042-18034174)
chr5 (1-134)||(5257055-5257188)
chr5 (1-134)||(33801529-33801662)
chr5 (1-108)||(22512365-22512472)
chr5 (1-135)||(7617193-7617327)
chr5 (35-135)||(25914902-25915002)
chr5 (1-127)||(38470639-38470765)
chr5 (28-135)||(39122262-39122369)
chr5 (2-108)||(39122366-39122472)
chr5 (61-133)||(30622627-30622699)
chr5 (61-132)||(32473303-32473374)
chr5 (44-107)||(6679724-6679788)
chr5 (44-107)||(28177801-28177865)
[»] chr8 (25 HSPs)
chr8 (1-134)||(36743390-36743523)
chr8 (1-127)||(11582826-11582952)
chr8 (1-132)||(42197344-42197475)
chr8 (1-127)||(29705422-29705548)
chr8 (1-133)||(2547056-2547188)
chr8 (1-133)||(9241612-9241744)
chr8 (3-135)||(30912468-30912600)
chr8 (1-127)||(2165877-2166003)
chr8 (1-135)||(20148820-20148954)
chr8 (1-129)||(29800862-29800990)
chr8 (2-133)||(31384725-31384856)
chr8 (1-135)||(30660648-30660782)
chr8 (1-132)||(26125695-26125825)
chr8 (1-134)||(45397376-45397508)
chr8 (2-133)||(3743832-3743963)
chr8 (1-110)||(5754963-5755072)
chr8 (1-133)||(42295255-42295386)
chr8 (1-135)||(1375602-1375736)
chr8 (4-133)||(40528542-40528671)
chr8 (61-135)||(34304908-34304981)
chr8 (61-133)||(10678060-10678132)
chr8 (61-134)||(35181636-35181709)
chr8 (61-133)||(33629901-33629973)
chr8 (1-37)||(42699317-42699353)
chr8 (61-133)||(19386473-19386545)
[»] scaffold0038 (1 HSPs)
scaffold0038 (1-135)||(112715-112849)
[»] chr4 (39 HSPs)
chr4 (1-135)||(27550369-27550503)
chr4 (1-135)||(28982728-28982862)
chr4 (1-133)||(35017792-35017924)
chr4 (1-134)||(23036040-23036173)
chr4 (1-133)||(33703201-33703333)
chr4 (1-135)||(1771172-1771306)
chr4 (1-133)||(25051753-25051885)
chr4 (1-133)||(27893750-27893882)
chr4 (3-133)||(43514594-43514724)
chr4 (1-135)||(55966252-55966386)
chr4 (1-135)||(27864624-27864758)
chr4 (1-134)||(31680962-31681095)
chr4 (1-133)||(43949709-43949841)
chr4 (1-133)||(51512173-51512305)
chr4 (1-135)||(43735802-43735936)
chr4 (1-133)||(23204686-23204818)
chr4 (1-130)||(48463361-48463490)
chr4 (1-127)||(12497016-12497142)
chr4 (1-115)||(39631161-39631275)
chr4 (1-129)||(45490225-45490353)
chr4 (1-134)||(27316619-27316753)
chr4 (4-135)||(28988536-28988666)
chr4 (2-135)||(21687067-21687200)
chr4 (1-134)||(56215805-56215937)
chr4 (4-128)||(41848034-41848158)
chr4 (1-135)||(41878466-41878593)
chr4 (1-121)||(46412389-46412509)
chr4 (4-106)||(41327478-41327580)
chr4 (148-228)||(48187484-48187566)
chr4 (61-134)||(19880074-19880147)
chr4 (61-133)||(55272284-55272356)
chr4 (61-132)||(35037125-35037195)
chr4 (61-135)||(17619058-17619132)
chr4 (61-129)||(712080-712148)
chr4 (61-133)||(48435487-48435559)
chr4 (61-135)||(46827612-46827686)
chr4 (95-135)||(32728511-32728551)
chr4 (85-131)||(960753-960799)
chr4 (61-134)||(3756159-3756232)
[»] chr3 (27 HSPs)
chr3 (1-135)||(36150190-36150324)
chr3 (1-135)||(42394325-42394459)
chr3 (1-133)||(24688310-24688442)
chr3 (1-133)||(40808925-40809057)
chr3 (1-133)||(54237156-54237288)
chr3 (1-134)||(46941113-46941246)
chr3 (1-133)||(40480809-40480941)
chr3 (1-133)||(53581766-53581898)
chr3 (1-134)||(52629888-52630021)
chr3 (1-135)||(54246054-54246188)
chr3 (1-134)||(25413741-25413874)
chr3 (1-135)||(47190932-47191066)
chr3 (1-133)||(45126836-45126968)
chr3 (1-125)||(42100748-42100872)
chr3 (1-133)||(27748623-27748746)
chr3 (35-135)||(1078312-1078412)
chr3 (1-135)||(53273599-53273724)
chr3 (1-85)||(51249368-51249452)
chr3 (43-135)||(29556865-29556956)
chr3 (55-135)||(19148882-19148962)
chr3 (1-135)||(11064628-11064762)
chr3 (61-133)||(9434244-9434316)
chr3 (61-133)||(51757713-51757784)
chr3 (61-135)||(4190171-4190245)
chr3 (71-133)||(54429173-54429235)
chr3 (45-107)||(26141543-26141606)
chr3 (61-135)||(10457798-10457872)
[»] chr2 (28 HSPs)
chr2 (1-135)||(19047217-19047351)
chr2 (1-135)||(30838692-30838826)
chr2 (2-134)||(4764633-4764765)
chr2 (1-135)||(43490307-43490441)
chr2 (1-132)||(42849768-42849898)
chr2 (1-133)||(43335671-43335803)
chr2 (1-133)||(1750474-1750606)
chr2 (1-127)||(12302167-12302293)
chr2 (1-133)||(16096807-16096940)
chr2 (4-135)||(34817682-34817813)
chr2 (1-100)||(13780676-13780775)
chr2 (1-127)||(42026829-42026955)
chr2 (1-134)||(39149201-39149332)
chr2 (2-83)||(8896541-8896622)
chr2 (61-135)||(34895647-34895721)
chr2 (61-133)||(11825562-11825634)
chr2 (61-135)||(6518400-6518474)
chr2 (61-135)||(18491825-18491899)
chr2 (61-135)||(41281880-41281954)
chr2 (61-133)||(966742-966814)
chr2 (61-133)||(43114677-43114749)
chr2 (69-133)||(12415368-12415432)
chr2 (69-133)||(12427428-12427492)
chr2 (61-133)||(16804088-16804160)
chr2 (61-133)||(16843370-16843442)
chr2 (61-135)||(12531569-12531643)
chr2 (61-133)||(4299328-4299400)
chr2 (45-107)||(40613913-40613976)
[»] chr7 (29 HSPs)
chr7 (1-133)||(41861736-41861868)
chr7 (1-127)||(24000926-24001052)
chr7 (1-127)||(42538345-42538471)
chr7 (2-135)||(16180263-16180396)
chr7 (1-129)||(5015455-5015583)
chr7 (1-135)||(5810830-5810964)
chr7 (1-127)||(32029731-32029857)
chr7 (1-127)||(42972912-42973038)
chr7 (1-135)||(44326238-44326372)
chr7 (1-134)||(44416841-44416974)
chr7 (1-133)||(26898310-26898442)
chr7 (1-133)||(43343532-43343664)
chr7 (1-135)||(45326080-45326214)
chr7 (1-134)||(4638106-4638239)
chr7 (1-127)||(27393174-27393300)
chr7 (1-135)||(35069781-35069915)
chr7 (1-115)||(38160505-38160619)
chr7 (2-133)||(10573810-10573941)
chr7 (1-127)||(9216361-9216487)
chr7 (1-133)||(43317503-43317635)
chr7 (1-133)||(5194139-5194271)
chr7 (21-135)||(47279630-47279744)
chr7 (2-82)||(24280555-24280635)
chr7 (61-134)||(40237039-40237112)
chr7 (61-135)||(31408539-31408613)
chr7 (61-135)||(33384991-33385065)
chr7 (61-135)||(27535137-27535211)
chr7 (61-135)||(31513407-31513481)
chr7 (63-107)||(35522902-35522947)
[»] chr6 (18 HSPs)
chr6 (1-129)||(7292807-7292935)
chr6 (1-127)||(9698247-9698373)
chr6 (1-135)||(21279989-21280123)
chr6 (1-135)||(26669915-26670049)
chr6 (1-132)||(13743130-13743261)
chr6 (1-132)||(13748630-13748761)
chr6 (1-127)||(7367609-7367735)
chr6 (1-133)||(30736042-30736174)
chr6 (1-135)||(3213460-3213594)
chr6 (1-134)||(21293584-21293717)
chr6 (1-133)||(24203895-24204027)
chr6 (3-135)||(26466861-26466993)
chr6 (1-135)||(7273241-7273375)
chr6 (2-132)||(30014404-30014534)
chr6 (61-133)||(33242523-33242595)
chr6 (61-135)||(27441662-27441736)
chr6 (61-134)||(33254034-33254107)
chr6 (61-135)||(31109128-31109202)
[»] chr1 (24 HSPs)
chr1 (1-133)||(5489836-5489968)
chr1 (1-133)||(48498870-48499002)
chr1 (1-133)||(43570994-43571126)
chr1 (1-135)||(7447885-7448019)
chr1 (1-134)||(4401388-4401521)
chr1 (1-132)||(37814838-37814969)
chr1 (1-135)||(24769405-24769539)
chr1 (1-133)||(23989431-23989563)
chr1 (1-135)||(750211-750345)
chr1 (1-134)||(50448167-50448300)
chr1 (1-134)||(2497469-2497602)
chr1 (1-134)||(4888103-4888235)
chr1 (61-133)||(35000021-35000093)
chr1 (61-135)||(35003414-35003488)
chr1 (61-135)||(44112797-44112871)
chr1 (61-133)||(45705945-45706017)
chr1 (61-130)||(48119748-48119817)
chr1 (61-133)||(45639640-45639712)
chr1 (61-135)||(26585582-26585656)
chr1 (61-135)||(38113101-38113175)
chr1 (64-134)||(45427652-45427722)
chr1 (61-134)||(41065271-41065344)
chr1 (44-107)||(45044570-45044634)
chr1 (61-113)||(46168503-46168555)
[»] scaffold0119 (1 HSPs)
scaffold0119 (1-135)||(745-879)
[»] scaffold0187 (2 HSPs)
scaffold0187 (1-133)||(14097-14228)
scaffold0187 (1-133)||(24425-24556)
[»] scaffold0385 (1 HSPs)
scaffold0385 (1-133)||(11311-11443)
[»] scaffold0157 (1 HSPs)
scaffold0157 (1-127)||(23335-23461)
[»] scaffold0003 (1 HSPs)
scaffold0003 (61-135)||(45625-45699)
[»] scaffold0100 (1 HSPs)
scaffold0100 (76-127)||(35370-35421)


Alignment Details
Target: chr5 (Bit Score: 129; Significance: 7e-67; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 41334703 - 41334571
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  41334703 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaagggtgta 41334604  T
Q  101 ttgccacatggggtggtacatgtatcaccactc 133  Q
    |||||||||||||||||||||||||||||||||    
T  41334603 ttgccacatggggtggtacatgtatcaccactc 41334571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 2614689 - 2614563
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  2614689 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgta 2614590  T
Q  101 ttgccacatggggtggtacatgtatca 127  Q
    |||||||||| ||||||||||||||||    
T  2614589 ttgccacatgaggtggtacatgtatca 2614563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 18034042 - 18034174
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  18034042 gatatttttgtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttatatgggtgtaaagggtgta 18034141  T
Q  101 ttgccacatggggtggtacatgtatcaccactc 133  Q
    |||||| |||||||||||||||||||| |||||    
T  18034142 ttgccatatggggtggtacatgtatcatcactc 18034174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 5257055 - 5257188
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| || ||||||| |||||||||||| | |||||||||| ||||||    
T  5257055 gatattttggtaatttcatctcacaaccacactttatcttctatttatgtggggtcaagattgccacatgtcagaattttatgtgggtgtaaagggtgta 5257154  T
Q  101 ttgccacatggggtggtacatgtatcaccactct 134  Q
    ||||||||||||||||||||||||||||||||||    
T  5257155 ttgccacatggggtggtacatgtatcaccactct 5257188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 33801529 - 33801662
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||  |||||    
T  33801529 gatattttagtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttgtgtgggtgtaaagagtgta 33801628  T
Q  101 ttgccacatggggtggtacatgtatcaccactct 134  Q
    ||||||||||||  ||||||| ||||| ||||||    
T  33801629 ttgccacatgggaaggtacatatatcatcactct 33801662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 22512365 - 22512472
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| ||||||    
T  22512365 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtggatgtaaagggtgta 22512464  T
Q  101 ttgccaca 108  Q
    ||||||||    
T  22512465 ttgccaca 22512472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 7617193 - 7617327
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| || | |||| ||| |||||||||||||| | |||||||| ||||||    
T  7617193 gatattttggtaagttcatctcacaaccacactttatcttctatttatgtgggatctaagttgtcacatgtcagaattttgtgttggtgtaaaaggtgta 7617292  T
Q  101 ttgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||||||||||| ||||||||||| |||||||    
T  7617293 ttgccacatggggtgatacatgtatcatcactctt 7617327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 25915002 - 25914902
Alignment:
Q  35 tatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactct 134  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  25915002 tatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtgtgggtgtaaatggtgtattgccacatgaggtggtacatgtatcatcactct 25914903  T
Q  135 t 135  Q
    |    
T  25914902 t 25914902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 38470639 - 38470765
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||| ||||| |||||| ||||||||||||||||||| |||||||||||| || |||||| |||||||||| | |||||||||| ||||||    
T  38470639 gatattttggtaaattcatttcacaatcacactttatcttctatttatgtggggtccagattaccacgtatcagaattttatgtgggtgtaaagggtgta 38470738  T
Q  101 ttgccacatggggtggtacatgtatca 127  Q
    |||||| ||| ||||||||||||||||    
T  38470739 ttgccatatgaggtggtacatgtatca 38470765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 28 - 135
Target Start/End: Complemental strand, 39122369 - 39122262
Alignment:
Q  28 cacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatca 127  Q
    ||||||||||||||||||||||||||||  |||||||||| ||||||||| |||| ||| |||||||| | ||||| |||||||||||||||||||||||    
T  39122369 cacactttatcttctatttgtgtggggtttaggttgccacatgtcagaatcttgtgtggatgtaaatgatatattgtcacatggggtggtacatgtatca 39122270  T
Q  128 ccactctt 135  Q
    ||||||||    
T  39122269 ccactctt 39122262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 39122472 - 39122366
Alignment:
Q  2 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgtat 101  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||||||  |||||||||| ||||||||| |||| ||| |||||||| | |||    
T  39122472 atattttggtaaattcatctcacaactacactttatcttctatttgtgtggggtttaggttgccacatgtcagaatcttgtgtggatgtaaatgatatat 39122373  T
Q  102 tgccaca 108  Q
    || ||||    
T  39122372 tgtcaca 39122366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 30622699 - 30622627
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||| ||||| |||||||| |||||||||  |||||||||||||||||||  ||||||||||||||||||    
T  30622699 ttgccacatgtcaaaattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactc 30622627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 132
Target Start/End: Complemental strand, 32473374 - 32473303
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccact 132  Q
    ||||||| |||||||||||||| |||||||||  ||||||||||||||||| |  |||||||||||||||||    
T  32473374 ttgccacatgtcagaattttgtgtgggtgtaagaggtgtattgccacatggaggtgtacatgtatcaccact 32473303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 107
Target Start/End: Complemental strand, 6679788 - 6679724
Alignment:
Q  44 tttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgt-aaatggtgtattgccac 107  Q
    |||||| |||||||| ||  |||||||||||| |||||| ||||||| ||| |||||||||||||    
T  6679788 tttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccac 6679724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 107
Target Start/End: Complemental strand, 28177865 - 28177801
Alignment:
Q  44 tttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgt-aaatggtgtattgccac 107  Q
    |||||| |||||||| ||  |||||||||||| |||||| ||||||| ||| |||||||||||||    
T  28177865 tttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 28177801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 126; Significance: 4e-65; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 36743523 - 36743390
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  36743523 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaatggtgta 36743424  T
Q  101 ttgccacatggggtggtacatgtatcaccactct 134  Q
    ||||||||||||||||||||||||||| ||||||    
T  36743423 ttgccacatggggtggtacatgtatcatcactct 36743390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 11582826 - 11582952
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  11582826 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgta 11582925  T
Q  101 ttgccacatggggtggtacatgtatca 127  Q
    |||||||||| ||||||||||||||||    
T  11582926 ttgccacatgaggtggtacatgtatca 11582952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 42197475 - 42197344
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||| ||||||    
T  42197475 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcaaaattttgtgtgggtgtaaagggtgta 42197376  T
Q  101 ttgccacatggggtggtacatgtatcaccact 132  Q
    ||||||||||||||||||||||||||| ||||    
T  42197375 ttgccacatggggtggtacatgtatcatcact 42197344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 29705422 - 29705548
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| ||||||    
T  29705422 gatattttgataagttcatctcacaaccacactttatcttctatttgtgcggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgta 29705521  T
Q  101 ttgccacatggggtggtacatgtatca 127  Q
    |||||||||||||||||||||||||||    
T  29705522 ttgccacatggggtggtacatgtatca 29705548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 2547056 - 2547188
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||| ||||||    
T  2547056 gatattttagtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgta 2547155  T
Q  101 ttgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||||| ||||||||||||||||| |||||    
T  2547156 ttgccacatagggtggtacatgtatcatcactc 2547188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 9241612 - 9241744
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||| |||||     
T  9241612 gatatttttgtaagttcatctcacaaccacactttatcttctatttatgtggggtccaggttgccacgtgtcagaattttgtgtgggtgcaaagggtgtg 9241711  T
Q  101 ttgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||||||||||||||||||||||| |||||    
T  9241712 ttgccacatggggtggtacatgtatcatcactc 9241744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 30912600 - 30912468
Alignment:
Q  3 tattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgtatt 102  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||  |||||||    
T  30912600 tattttggtaagttcatctcacaaccgcaccttatcttctatttgtgtggggtctaggttgccacgtgtcagaattttgtgtgggtgtaaagagtgtatt 30912501  T
Q  103 gccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||||||||||||||||||||| |||||||    
T  30912500 gccacatggggtggtacatgtatcatcactctt 30912468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 2166003 - 2165877
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||    
T  2166003 gatattttggtaagttcatctcataaccacactttatcttctatttgtgtggggttcaggttgccacgtgtcagaattttgtgtgggtgtaaagggtgta 2165904  T
Q  101 ttgccacatggggtggtacatgtatca 127  Q
    ||| |||||||| ||||||||||||||    
T  2165903 ttgtcacatgggatggtacatgtatca 2165877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 20148820 - 20148954
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||| | |||||||||| ||||||    
T  20148820 gatattttggtaagttcatctcacaaccacactttatcatctatttatgtgggatccagattgccacgtgtcagaattttatgtgggtgtaaagggtgta 20148919  T
Q  101 ttgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||||||| |||||||||||||||||||||||    
T  20148920 ttgccacatggtgtggtacatgtatcaccactctt 20148954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 29800990 - 29800862
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||| |||||||||||| | |||||||||| ||||||    
T  29800990 gatattttggtaagttcatctcacaaccacactttatcttctatttatgtggggtcaagattgccacatgtcagaattttatgtgggtgtaaagggtgta 29800891  T
Q  101 ttgccacatggggtggtacatgtatcacc 129  Q
    |||||||||||||||||||||||||||||    
T  29800890 ttgccacatggggtggtacatgtatcacc 29800862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 2 - 133
Target Start/End: Original strand, 31384725 - 31384856
Alignment:
Q  2 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgtat 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||| |||||| ||| |||    
T  31384725 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgctacgtgtcagaattttatgtggatgtaaagggtatat 31384824  T
Q  102 tgccacatggggtggtacatgtatcaccactc 133  Q
    |||||||||||||||||||| ||||| |||||    
T  31384825 tgccacatggggtggtacatatatcatcactc 31384856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 30660782 - 30660648
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||| ||||||    
T  30660782 gatattttggtaagttcatcttacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttatgtggatgtaaagggtgta 30660683  T
Q  101 ttgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||||| || || ||||||||||| |||||||    
T  30660682 ttgccacataggatgatacatgtatcatcactctt 30660648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 26125695 - 26125825
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||| |  ||||||||| ||||||    
T  26125695 gatattttggtaagttcatctcacaaccacactttatcttctatttatgtggg-tccagattgccacgtgtcagaattttatgcgggtgtaaagggtgta 26125793  T
Q  101 ttgccacatggggtggtacatgtatcaccact 132  Q
    ||||||||||||||||||||| ||||||||||    
T  26125794 ttgccacatggggtggtacatatatcaccact 26125825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 45397376 - 45397508
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||| |||||     
T  45397376 gatatttttgtaagttcatctcacaaccacaatttatcttctatttgtgtgggctccagattgccacgtgtcagaattttgtgtgggtgtaaagggtgtg 45397475  T
Q  101 ttgccacatggggtggtacatgtatcaccactct 134  Q
    ||||||||| ||||||||||||||||| ||||||    
T  45397476 ttgccacat-gggtggtacatgtatcatcactct 45397508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 2 - 133
Target Start/End: Original strand, 3743832 - 3743963
Alignment:
Q  2 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgtat 101  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||| |||| ||| |||||||||||||||||||| | |||||||||| |||||||    
T  3743832 atattttgataagttcatctcacaaccacactttatcttctatttatgtagggttcagattgccacgtgtcagaattttatgtgggtgtaaagggtgtat 3743931  T
Q  102 tgccacatggggtggtacatgtatcaccactc 133  Q
    ||| |||||||||||||||| ||||| |||||    
T  3743932 tgctacatggggtggtacatatatcatcactc 3743963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 5754963 - 5755072
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||| |||||||||| |||||||||| ||||||    
T  5754963 gatattttggtaagttcatctcacaaccacactttatcttctatttatgtgggatccaagttgccacgtgttagaattttgtgtgggtgtaaagggtgta 5755062  T
Q  101 ttgccacatg 110  Q
    ||||| ||||    
T  5755063 ttgccccatg 5755072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 42295255 - 42295386
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||| |||||||||||||| ||| |||||| ||| ||    
T  42295255 gatattttggtaagttcatctcacaaccacactttatcttctatttatgt-gggtccaagttgccacatgtcagaattttgtgtggatgtaaagggtata 42295353  T
Q  101 ttgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||||| || |||||||| ||||| |||||    
T  42295354 ttgccacataggatggtacatttatcatcactc 42295386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 1375602 - 1375736
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||| || |||||||||| |||||||||||||||||||||||| || ||| ||||||||||| ||||| |||| ||||||||||   ||||    
T  1375602 gatattttggtaaatttatctcacaactacactttatcttctatttgtgtggagttcagattgccacgtgttagaatcttgtgtgggtgtaaagaatgta 1375701  T
Q  101 ttgccacatggggtggtacatgtatcaccactctt 135  Q
    ||| ||||| |||||||||||||||||||||||||    
T  1375702 ttgtcacatagggtggtacatgtatcaccactctt 1375736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 133
Target Start/End: Complemental strand, 40528671 - 40528542
Alignment:
Q  4 attttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgtattg 103  Q
    |||||| ||| || |||||||||||||||||| ||||||||||||||||||| || |||| ||| ||||| |||||||| ||| |||||||| | |||||    
T  40528671 attttgataaatttatctcacaaccacactttctcttctatttgtgtggggttcaagttgtcacatgtcataattttgtgtggatgtaaatgatatattg 40528572  T
Q  104 ccacatggggtggtacatgtatcaccactc 133  Q
     |||||| ||  | ||||||||||||||||    
T  40528571 tcacatgagggtgcacatgtatcaccactc 40528542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 34304908 - 34304981
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||| |||||| ||||||| |||||||||  |||||||||||||||||||| ||||||||||||||||||||    
T  34304908 ttgccacatgtcaggattttgtttgggtgtaagaggtgtattgccacatggggt-gtacatgtatcaccactctt 34304981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 10678132 - 10678060
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||| |||||| ||||||| |||||||||  | |||||||||||||||||  ||||||||||||||||||    
T  10678132 ttgccacatgtcaggattttgtgtgggtgtaagagatgtattgccacatgggggtgtacatgtatcaccactc 10678060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 134
Target Start/End: Original strand, 35181636 - 35181709
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactct 134  Q
    ||||||| |||||| ||||||| |||||||||  ||||||||||||||||  |  |||||||||||||||||||    
T  35181636 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgaaggtgtacatgtatcaccactct 35181709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 33629973 - 33629901
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||| ||||| |||||||| | |||||||  |||||||||||||||||||  |||||| |||||||||||    
T  33629973 ttgccacatgtcaaaattttgtgtaggtgtaagaggtgtattgccacatgggggtgtacatatatcaccactc 33629901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 42699317 - 42699353
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttat 37  Q
    |||||||| ||||||||||||||||||||||||||||    
T  42699317 gatatttttgtaagttcatctcacaaccacactttat 42699353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 19386545 - 19386473
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||| |||||| ||||||| ||||||||   |||| ||| |||||||| |  ||||||||||||||||||    
T  19386545 ttgccacatgtcaggattttgtgtgggtgtatgaggtgcattaccacatggagatgtacatgtatcaccactc 19386473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 112715 - 112849
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||    
T  112715 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcaaaattttgtatgggtgtaaagggtgta 112814  T
Q  101 ttgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||||||||||||||||||||||| |||||||    
T  112815 ttgccacatggggtggtacatgtatcatcactctt 112849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 119; Significance: 6e-61; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 27550369 - 27550503
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27550369 gatattttggtaagttcatcttacaaccacactttatcttctatttatgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaagggtgta 27550468  T
Q  101 ttgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||||||||||||||||||||||| |||||||    
T  27550469 ttgccacatggggtggtacatgtatcatcactctt 27550503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 28982862 - 28982728
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| ||||||    
T  28982862 gatattttggtaagttcatctcacaaccgcactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtggatgtaaaaggtgta 28982763  T
Q  101 ttgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||||||||||||||||||||||| |||||||    
T  28982762 ttgccacatggggtggtacatgtatcatcactctt 28982728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 35017792 - 35017924
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| | ||||    
T  35017792 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtggatgtaaaagatgta 35017891  T
Q  101 ttgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||||||||||||||||||||||| |||||    
T  35017892 ttgccacatggggtggtacatgtatcatcactc 35017924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 23036040 - 23036173
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| | |||     
T  23036040 gatatttttgtaagttcatctcacaaccacactttatcttctatttatgtggggtccaggttgccacgtgtcagaattttgtgtgggtgtaaaggatgtg 23036139  T
Q  101 ttgccacatggggtggtacatgtatcaccactct 134  Q
    ||||||||||||||||||||||||||| ||||||    
T  23036140 ttgccacatggggtggtacatgtatcatcactct 23036173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 33703201 - 33703333
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||| |||||||||| ||||||    
T  33703201 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgcgggatccaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgta 33703300  T
Q  101 ttgccacatggggtggtacatgtatcaccactc 133  Q
    |||||| |||||||||||||||||||| |||||    
T  33703301 ttgccatatggggtggtacatgtatcatcactc 33703333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 1771306 - 1771172
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||| |||||||||||| |||||||||| ||||||    
T  1771306 gatattttgataagttcatctcacaaccacattttatcttctatttatgtggggtccaagttgccacgtctcagaattttgtgtgggtgtaaagggtgta 1771207  T
Q  101 ttgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||||||||||||||||||||||| |||||||    
T  1771206 ttgccacatggggtggtacatgtatcatcactctt 1771172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 25051753 - 25051885
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||| |||||||| ||||    
T  25051753 gatattttggtaagttcatctcacaatcacactttatcttctatttatgtggggtccaagttgccacgtgtcagaattttgtgtggatgtaaatgatgta 25051852  T
Q  101 ttgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||| ||||||||||||||||||| |||||    
T  25051853 ttgccacgtggggtggtacatgtatcatcactc 25051885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 27893882 - 27893750
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| || ||||||| |||||||||||| | |||||||||| ||||||    
T  27893882 gatattttggtaatttcatctcacaaccacactttatcttctatttatgtggggtcaagattgccacatgtcagaattttatgtgggtgtaaagggtgta 27893783  T
Q  101 ttgccacatggggtggtacatgtatcaccactc 133  Q
    |||||||||||||||||||||||||||||||||    
T  27893782 ttgccacatggggtggtacatgtatcaccactc 27893750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 3 - 133
Target Start/End: Complemental strand, 43514724 - 43514594
Alignment:
Q  3 tattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgtatt 102  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| | ||| ||||||  |||||||    
T  43514724 tattttggtaagttcatctcacaaccacaccttatcttctatttgtgtggggtctaggttgccacgtgtcagaattttttgtggatgtaaagagtgtatt 43514625  T
Q  103 gccacatggggtggtacatgtatcaccactc 133  Q
    ||||||||||||||||||||||||| |||||    
T  43514624 gccacatggggtggtacatgtatcatcactc 43514594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 55966386 - 55966252
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| || ||||||| |||||||||||| | |||||||||| ||||||    
T  55966386 gatattttggtaagttcatctcacaaccacaatttatcttctatttatgtggggtctagattgccacctgtcagaattttatgtgggtgtaaagggtgta 55966287  T
Q  101 ttgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||||||| |||||||||||||||||||||||    
T  55966286 ttgccacatggagtggtacatgtatcaccactctt 55966252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 27864624 - 27864758
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||| || |||| |||||||||||| | ||| |||||| ||||||    
T  27864624 gatattttggtaagttcatctcacaaccacactttattttctatttatgtggggttcagattaccacatgtcagaattttatgtggatgtaaagggtgta 27864723  T
Q  101 ttgccacatggggtggtacatgtatcaccactctt 135  Q
    |||||||||||||||||||||||||||||||||||    
T  27864724 ttgccacatggggtggtacatgtatcaccactctt 27864758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 31680962 - 31681095
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||  || |||||||||||||||||||| | | |||||||| ||||||    
T  31680962 gatattttggtaagttcatctcacaaccacactttatcttctatttatgtggggtttagattgccacgtgtcagaattttatgtaggtgtaaagggtgta 31681061  T
Q  101 ttgccacatggggtggtacatgtatcaccactct 134  Q
    |||||||||||| || ||||||||||||||||||    
T  31681062 ttgccacatgggatgctacatgtatcaccactct 31681095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 43949841 - 43949709
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||   ||||||||||||||||||||||||||| |||| ||||||    
T  43949841 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgcgggatccaatatgccacgtgtcagaattttgtatgggtataaagggtgta 43949742  T
Q  101 ttgccacatggggtggtacatgtatcaccactc 133  Q
    |||||| || ||||||||||||||||| |||||    
T  43949741 ttgccaaatagggtggtacatgtatcatcactc 43949709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 51512305 - 51512173
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| | || | ||||    
T  51512305 gatattttggtaagttcatcttataaccacactttatcttttatttgtgtggggtccaggttgccacgtgtcagaattttgtgtgggtattaaagatgta 51512206  T
Q  101 ttgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||| ||||||||||||||||||| |||||    
T  51512205 ttgccacgtggggtggtacatgtatcatcactc 51512173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 43735802 - 43735936
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||| |||| |||||||||||||||| | ||| |||||| ||||||    
T  43735802 gatattttgataagttcatctcacaatcacactttatcttctatttgtgtgggatccaagttgtcacgtgtcagaattttatgtggatgtaaagggtgta 43735901  T
Q  101 ttgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||| ||||||||||||||||||| |||||||    
T  43735902 ttgccacgtggggtggtacatgtatcatcactctt 43735936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 23204818 - 23204686
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| | |||||||||| | | ||    
T  23204818 gatatttttgtaagttcatgtcacaaccacactttatcttctatttatgtggggtccaggttgccacatgtcagaattttatgtgggtgtaaaggatata 23204719  T
Q  101 ttgccacatggggtggtacatgtatcaccactc 133  Q
    |||||||||||| |||||| ||||||| |||||    
T  23204718 ttgccacatgggatggtacgtgtatcatcactc 23204686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 48463490 - 48463361
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||| |||||||| ||| || |||| |||||||||||| | |||||||||| ||||||    
T  48463490 gatattttggtaagttcatctcacaaccatactttattttctatttatgtggggttcagattaccacatgtcagaattttatgtgggtgtaaagggtgta 48463391  T
Q  101 ttgccacatggggtggtacatgtatcacca 130  Q
    ||||||||| | ||||||||||||||||||    
T  48463390 ttgccacatagagtggtacatgtatcacca 48463361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 12497016 - 12497142
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||| ||| ||  ||||||||||| |||||||||| ||||||||||  |||||    
T  12497016 gatattttggtaagttcatcttacaatcacactttatcttctatttgtgtgaggttcaatttgccacgtgttagaattttgtgtgggtgtaaaacgtgta 12497115  T
Q  101 ttgccacatggggtggtacatgtatca 127  Q
    ||| ||||||||||||| |||||||||    
T  12497116 ttgtcacatggggtggtgcatgtatca 12497142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 39631161 - 39631275
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||   || |||||||||||||||||| |||||||||| | ||||    
T  39631161 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggttcaatatgtcacgtgtcagaattttgtgtgggtgtaaaggatgta 39631260  T
Q  101 ttgccacatggggtg 115  Q
    ||| |||||||||||    
T  39631261 ttgtcacatggggtg 39631275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 45490353 - 45490225
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||| ||| |||| ||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||| |||| |||||||||||| | ||    
T  45490353 gatactttagtaaattcatctcacaaccacactttatcttctatttgtacgggatccaggttgccacgtgtcagaatcttgtgtgggtgtaaatgatata 45490254  T
Q  101 ttgccacatggggtggtacatgtatcacc 129  Q
    ||||||||| ||||  |||||||||||||    
T  45490253 ttgccacatagggtactacatgtatcacc 45490225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 27316753 - 27316619
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaa-ttttgtatgggtgtaaatggtgt 99  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| | ||| ||||| ||||||||||||||||| |||||| ||| |||||| |||||    
T  27316753 gatattttggtaagttcatctcataaccacactttatcttctatttatttggagtccaagttgccacgtgtcagaatttttgtgtggatgtaaagggtgt 27316654  T
Q  100 attgccacatggggtggtacatgtatcaccactct 134  Q
    |||| |||||||| || || |||||||| ||||||    
T  27316653 attgtcacatgggatgataaatgtatcatcactct 27316619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 4 - 135
Target Start/End: Original strand, 28988536 - 28988666
Alignment:
Q  4 attttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgtattg 103  Q
    |||||| ||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||| | ||||  |||||||||    
T  28988536 attttgataaattcatctcataaccacactttctcttctatttgtgtggggtccaggttgccatatgtcagaattttgtatgag-gtaaggggtgtattg 28988634  T
Q  104 ccacatggggtggtacatgtatcaccactctt 135  Q
     |||||| ||  ||||||||||||||||||||    
T  28988635 tcacatgagggtgtacatgtatcaccactctt 28988666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 135
Target Start/End: Original strand, 21687067 - 21687200
Alignment:
Q  2 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgtat 101  Q
    ||||||| |||||||||||||| ||||| |||||||||||||||||| ||| || |||||||||||||||||||||||||| ||  ||||||   |||||    
T  21687067 atattttagtaagttcatctcataaccatactttatcttctatttgtctggagttcaggttgccacgtgtcagaattttgtgtgaatgtaaagaatgtat 21687166  T
Q  102 tgccacatggggtggtacatgtatcaccactctt 135  Q
    |||||||| || |||||||| ||||| |||||||    
T  21687167 tgccacataggttggtacatatatcatcactctt 21687200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 56215937 - 56215805
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||||| || || |||||||||||||||||| ||| |||||||||||||||| ||||||| |  |||||||||||||| |||||||||  ||||||    
T  56215937 gatattttggaaaatttatctcacaaccacactttctct-ctatttgtgtggggtctaggttgctatatgtcagaattttgtgtgggtgtaagaggtgta 56215839  T
Q  101 ttgccacatggggtggtacatgtatcaccactct 134  Q
    | ||||||||| |  |||||||||||||||||||    
T  56215838 tggccacatggtggtgtacatgtatcaccactct 56215805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 128
Target Start/End: Original strand, 41848034 - 41848158
Alignment:
Q  4 attttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgtattg 103  Q
    ||||||| || |||||| |||||||||||||| ||||||||||||||||||| ||| ||| ||| |||||||||||||  ||| |||||  |||||||||    
T  41848034 attttggcaaattcatcgcacaaccacactttctcttctatttgtgtggggttcagattgtcacatgtcagaattttgcgtggatgtaaggggtgtattg 41848133  T
Q  104 ccacatggggtggtacatgtatcac 128  Q
    ||||||||||  |||||||||||||    
T  41848134 ccacatgggggtgtacatgtatcac 41848158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 41878466 - 41878593
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||| ||||||||||||||||||| || || ||||||||||||||||||||||| ||| |||||||||||||||||| | ||||||||  |||||    
T  41878466 gatattttgataagttcatctcacaaccaaaccttctcttctatttgtgtggggtccagattgtcacgtgtcagaattttgtgttggtgtaaagagtgta 41878565  T
Q  101 ttgccacatggggtggtacatgtatcaccactctt 135  Q
    ||  ||     ||||||||||||||||||||||||    
T  41878566 tt--ca-----ggtggtacatgtatcaccactctt 41878593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 46412509 - 46412389
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||  |  |||||||||||||||||||||| | | ||||||  || ||    
T  46412509 gatattttggtaagttcttctcacaaccacactttatcttctatttatgtggggtttaaattgccacgtgtcagaattttgtgtagatgtaaaaagtata 46412410  T
Q  101 ttgccacatggggtggtacat 121  Q
    ||| || || |||||||||||    
T  46412409 ttgtcatatagggtggtacat 46412389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 41327580 - 41327478
Alignment:
Q  4 attttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgtattg 103  Q
    |||||||||| ||||||||||| ||||||||| ||||| ||||||||||||||||||||||||| ||| |||||||| | || ||||||  |||||||||    
T  41327580 attttggtaaattcatctcacatccacactttctcttcaatttgtgtggggtccaggttgccacatgttagaattttttgtgagtgtaaggggtgtattg 41327481  T
Q  104 cca 106  Q
    |||    
T  41327480 cca 41327478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 228
Target Start/End: Original strand, 48187484 - 48187566
Alignment:
Q  148 cgttccgaacttagtccgttaag--cttgtgtttatttatggtaaaattgtatttgtacgactgactatttggtttacctatg 228  Q
    ||||||||||||||||||||||   ||||  | | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  48187484 cgttccgaacttagtccgttaatatcttgcttgtgtttatggtaaaattgtatttgtacgactgactatttggtttacctatg 48187566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 61 - 134
Target Start/End: Original strand, 19880074 - 19880147
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactct 134  Q
    ||||||| |||||| ||||||| |||||||||  |||||||||||||||||||  |||||||||||||||||||    
T  19880074 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactct 19880147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 55272356 - 55272284
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||| |||||| ||||||| |||||||||  |||||||||||||||||||  ||||||||||||||||||    
T  55272356 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactc 55272284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 132
Target Start/End: Original strand, 35037125 - 35037195
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccact 132  Q
    ||||||| |||||| ||||||| |||||||||  ||||||||||||||||| || |||||||||||||||||    
T  35037125 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatggagt-gtacatgtatcaccact 35037195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 17619132 - 17619058
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||| |||||| ||||||| |||||||||  ||||||||||||  |||||  ||||||||||||||||||||    
T  17619132 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccaggtggggatgtacatgtatcaccactctt 17619058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 61 - 129
Target Start/End: Original strand, 712080 - 712148
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcacc 129  Q
    ||||||| |||||| ||||||| |||||||||  ||||||||||||||||| |  ||||||||||||||    
T  712080 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatggaggtgtacatgtatcacc 712148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 48435559 - 48435487
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||| |||||| ||||||| |||||||||  | ||||||| |||||||||  ||||||||||||||||||    
T  48435559 ttgccacatgtcaggattttgtgtgggtgtaagagatgtattgtcacatgggggtgtacatgtatcaccactc 48435487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 46827686 - 46827612
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||| |||||| ||||||| |||||||||  | |||||| |||||||| |  ||||||||||||||||||||    
T  46827686 ttgccacatgtcaggattttgtgtgggtgtaagagatgtatttccacatggaggtgtacatgtatcaccactctt 46827612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 135
Target Start/End: Original strand, 32728511 - 32728551
Alignment:
Q  95 ggtgtattgccacatggggtggtacatgtatcaccactctt 135  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  32728511 ggtgtattgccacatgggggtgtacatgtatcaccactctt 32728551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 960799 - 960753
Alignment:
Q  85 gggtgtaaatggtgtattgccacatggggtggtacatgtatcaccac 131  Q
    ||||||||  |||||||||||||||||||  ||||||||||||||||    
T  960799 gggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccac 960753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 134
Target Start/End: Complemental strand, 3756232 - 3756159
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactct 134  Q
    ||||||| |||||  ||||| | |||||||||  | ||||||||||||||||   |||||||||||||||||||    
T  3756232 ttgccacatgtcatgattttatgtgggtgtaagagttgtattgccacatgggagtgtacatgtatcaccactct 3756159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 119; Significance: 6e-61; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 36150190 - 36150324
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||| ||||||    
T  36150190 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggagtccaggttgccacgtgtcagaattttgtgtggatgtaaagggtgta 36150289  T
Q  101 ttgccacatggggtggtacatgtatcaccactctt 135  Q
    |||||||||||||||||||||||||||||||||||    
T  36150290 ttgccacatggggtggtacatgtatcaccactctt 36150324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 42394459 - 42394325
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||    
T  42394459 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcaaaattttgtatgggtgtaaagggtgta 42394360  T
Q  101 ttgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||||||||||||||||||||||| |||||||    
T  42394359 ttgccacatggggtggtacatgtatcatcactctt 42394325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 24688442 - 24688310
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  24688442 gatattttggtaagttcatctcacaaccacactttatcttctatttatgtggggtccaggttgccacgtgtcagaattttgtgtgggggtaaatggtgta 24688343  T
Q  101 ttgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||||||||||||||||||||||| |||||    
T  24688342 ttgccacatggggtggtacatgtatcatcactc 24688310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 40808925 - 40809057
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||    
T  40808925 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtgtggatgtaaaaggtgta 40809024  T
Q  101 ttgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||||||||||||||||||||||| |||||    
T  40809025 ttgccacatggggtggtacatgtatcatcactc 40809057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 54237156 - 54237288
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||    
T  54237156 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaatattgtatgggtgtaaagggtgta 54237255  T
Q  101 ttgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||||||||||||||||||||||| |||||    
T  54237256 ttgccacatggggtggtacatgtatcatcactc 54237288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 46941113 - 46941246
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||  |||||    
T  46941113 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttatgtgggtgtaaagagtgta 46941212  T
Q  101 ttgccacatggggtggtacatgtatcaccactct 134  Q
    ||||||||||||||||||||||||||| ||||||    
T  46941213 ttgccacatggggtggtacatgtatcatcactct 46941246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 40480809 - 40480941
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  40480809 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtagggtccaggttgccacgtgtcagaattttgtgtgggtgtaaagggtgta 40480908  T
Q  101 ttgccacatggggtggtacatgtatcaccactc 133  Q
    ||||| ||||||||| ||||||||||| |||||    
T  40480909 ttgccgcatggggtgatacatgtatcatcactc 40480941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 53581898 - 53581766
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  53581898 gatattttgataagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtgtgggtgtaaagggtgta 53581799  T
Q  101 ttgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||||| |||||||||| |||||| |||||    
T  53581798 ttgccacatagggtggtacaggtatcatcactc 53581766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 52629888 - 52630021
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||| |||||||||| ||||||    
T  52629888 gatatttttgtaagttcatctcacaaccacactttatcttctatttatgtagggtccaggttgctacgtgtcagaattttgtgtgggtgtaaagggtgta 52629987  T
Q  101 ttgccacatggggtggtacatgtatcaccactct 134  Q
    ||||||||||||||||||||||||||| ||||||    
T  52629988 ttgccacatggggtggtacatgtatcatcactct 52630021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 54246188 - 54246054
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||   ||||    
T  54246188 gatatttttgtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatgtgggtgtaaagaatgta 54246089  T
Q  101 ttgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||||||||||||||||||||||| |||||||    
T  54246088 ttgccacatggggtggtacatgtatcatcactctt 54246054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 25413741 - 25413874
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||| ||||||    
T  25413741 gatatttttgtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttaccacgtgtcagagttttgtgtgggtgtaaagggtgta 25413840  T
Q  101 ttgccacatggggtggtacatgtatcaccactct 134  Q
    ||| || |||||||||||||||||||| ||||||    
T  25413841 ttgtcatatggggtggtacatgtatcatcactct 25413874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 47191066 - 47190932
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||| |||||||||| ||||||    
T  47191066 gatattttgataagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttaccacatgtcagaattttgtgtgggtgtaaagggtgta 47190967  T
Q  101 ttgccacatggggtggtacatgtatcaccactctt 135  Q
    |||||||||||  |||||||||||||| |||||||    
T  47190966 ttgccacatggaatggtacatgtatcatcactctt 47190932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 45126968 - 45126836
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| || |||| || ||||||||| | |||||||||| ||||||    
T  45126968 gatattttggtaagttcatctcacaaccacactttattttctatttatgtggggtccagattaccacatgccagaattttatgtgggtgtaaagggtgta 45126869  T
Q  101 ttgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||||||| |||||||||||||||||||||    
T  45126868 ttgccacatggagtggtacatgtatcaccactc 45126836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 42100748 - 42100872
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||| || |||||||||||||||||||||||| | |||||||||| |||| |    
T  42100748 gatattttggtaagttcatctcacaaccacattttatcttttatttgtgtggagttcaggttgccacgtgtcagaattttatgtgggtgtaaagggtgca 42100847  T
Q  101 ttgccacatggggtggtacatgtat 125  Q
    |||||||||| ||||||||||||||    
T  42100848 ttgccacatgaggtggtacatgtat 42100872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 27748623 - 27748746
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||| |          ||||||    
T  27748623 gatattttggtaagttcatctcacaacaatactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttgtgt---------cggtgta 27748713  T
Q  101 ttgccacatggggtggtacatgtatcaccactc 133  Q
    |||||||||||||||||||||||||||||||||    
T  27748714 ttgccacatggggtggtacatgtatcaccactc 27748746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 1078312 - 1078412
Alignment:
Q  35 tatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactct 134  Q
    |||||||||||||||||| || |||||||||||||||||||||||||| ||| |||||| |||||||||||||||| |||||||||||||||| ||||||    
T  1078312 tatcttctatttgtgtggagttcaggttgccacgtgtcagaattttgtgtggatgtaaagggtgtattgccacatgaggtggtacatgtatcatcactct 1078411  T
Q  135 t 135  Q
    |    
T  1078412 t 1078412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 53273724 - 53273599
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||| |||||| |||||||| |||||| ||||||||||      |||||   ||||||    
T  53273724 gatattttggtaagttcatctcacaaccatactttatcttttatttatgtgggatccaggttaccacgtatcagaatttt------gtgta---ggtgta 53273634  T
Q  101 ttgccacatggggtggtacatgtatcaccactctt 135  Q
    |||||||||||| |||||||||||||| |||||||    
T  53273633 ttgccacatgggatggtacatgtatcatcactctt 53273599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 51249368 - 51249452
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatg 85  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||| ||||||| |||||||||||||||||    
T  51249368 gatattttggtaaattcatctcacaaccacactttctcttctatttgtgtgggatccagattgccacatgtcagaattttgtatg 51249452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 43 - 135
Target Start/End: Complemental strand, 29556956 - 29556865
Alignment:
Q  43 atttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||||||||| ||||||||||| ||||||| |||| ||||||||||||| |||||||||||||||  |||||||||||||||||||||||    
T  29556956 atttgtgtggggttcaggttgccacatgtcaga-ttttatatgggtgtaaattgtgtattgccacatgtagtggtacatgtatcaccactctt 29556865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 55 - 135
Target Start/End: Original strand, 19148882 - 19148962
Alignment:
Q  55 tccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||||||||  |||||||||||||| ||||||||| ||||||||||||||||||||  |||||||| |||||| ||||    
T  19148882 tccaggttgccatatgtcagaattttgtgtgggtgtaagtggtgtattgccacatgggggtgtacatgtgtcaccattctt 19148962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 11064762 - 11064628
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||| | | ||||||||| || |||||||  |||||||||||||||||||| || || |||| ||||| |||||||| |||||||||  ||||||    
T  11064762 gatattttgattaattcatctcataatcacacttactcttctatttgtgtggggtctagattaccacatgtcaaaattttgtgtgggtgtaaggggtgta 11064663  T
Q  101 ttgccacatggggtggtacatgtatcaccactctt 135  Q
    ||| ||||   |   ||||||||||||||||||||    
T  11064662 ttgtcacacaagagtgtacatgtatcaccactctt 11064628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 9434244 - 9434316
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||| |||||||||||||| |||||||||  ||||||||||||||||||   ||||||||||||||||||    
T  9434244 ttgccacatgtcagaattttgtgtgggtgtaagaggtgtattgccacatgggagtgtacatgtatcaccactc 9434316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 51757713 - 51757784
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||| |||||| ||| ||| |||||||||  ||| |||||||||||||||| ||||||||||||||||||    
T  51757713 ttgccacatgtcaggattgtgtgtgggtgtaagaggtatattgccacatggggt-gtacatgtatcaccactc 51757784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 4190245 - 4190171
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||| |||||| ||||||| |||||||||  |||||||||||||||  ||   |||||||||||||||||||    
T  4190245 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacataagggtatacatgtatcaccactctt 4190171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 54429235 - 54429173
Alignment:
Q  71 tcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactc 133  Q
    |||||||||||| |||||||||  |||||||||||| ||||||  ||||||||||| ||||||    
T  54429235 tcagaattttgtgtgggtgtaagaggtgtattgccatatgggggtgtacatgtatcgccactc 54429173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 26141543 - 26141606
Alignment:
Q  45 ttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtg-taaatggtgtattgccac 107  Q
    |||||||||||||| ||  |||||||||||| |||||| |||||| |||| |||||||||||||    
T  26141543 ttgtgtggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccac 26141606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 10457872 - 10457798
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||| |||||| ||||||| ||| |||||  |||||||||||||||| ||   ||||||||||| |||||||    
T  10457872 ttgccacatgtcaggattttgtgtggatgtaagaggtgtattgccacatgagggtatacatgtatcaacactctt 10457798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 119; Significance: 6e-61; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 19047217 - 19047351
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||    
T  19047217 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcaaaattttgtatgggtgtaaagggtgta 19047316  T
Q  101 ttgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||||||||||||||||||||||| |||||||    
T  19047317 ttgccacatggggtggtacatgtatcatcactctt 19047351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 30838692 - 30838826
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||    
T  30838692 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtgtaggtgtaaaaggtgta 30838791  T
Q  101 ttgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||||||||||||||||||||||| |||||||    
T  30838792 ttgccacatggggtggtacatgtatcatcactctt 30838826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 2 - 134
Target Start/End: Complemental strand, 4764765 - 4764633
Alignment:
Q  2 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgtat 101  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||    
T  4764765 atattttggtaaattcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtgtggatgtaaaaggtgtat 4764666  T
Q  102 tgccacatggggtggtacatgtatcaccactct 134  Q
    ||||||||| |||||||||||||||| ||||||    
T  4764665 tgccacatgaggtggtacatgtatcatcactct 4764633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 43490441 - 43490307
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  43490441 gatattttggtaagttcatctcataaccacactttatcttctatttatgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgta 43490342  T
Q  101 ttgccacatggggtggtacatgtatcaccactctt 135  Q
    |||||||||| ||||||||||||| || |||||||    
T  43490341 ttgccacatgaggtggtacatgtagcatcactctt 43490307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 42849898 - 42849768
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||    
T  42849898 gatattttgataagttcatctcacaaccacactttat-ttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgta 42849800  T
Q  101 ttgccacatggggtggtacatgtatcaccact 132  Q
    ||||||||||||||||||||||||||| ||||    
T  42849799 ttgccacatggggtggtacatgtatcatcact 42849768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 43335803 - 43335671
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||| |||||| ||| ||    
T  43335803 gatattttggtaagttcatctcacaactacactttatcttctatttatgtgggatccaggttgccacgtgtcagaattttgtgtggatgtaaaaggtata 43335704  T
Q  101 ttgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||||||||||||||||||||||| |||||    
T  43335703 ttgccacatggggtggtacatgtatcatcactc 43335671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 1750474 - 1750606
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||| |||||     
T  1750474 gatatttttgtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgtgtgagtgtaaagggtgtg 1750573  T
Q  101 ttgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||||||||||||||||  ||||| |||||    
T  1750574 ttgccacatggggtggtacaaatatcatcactc 1750606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 12302293 - 12302167
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||| ||| |||||| | ||||    
T  12302293 gatatttttgtaagttcatctcacaaccacactttatcttctatttatgtggggtccaggttaccatgtgtcagaattttgtgtggatgtaaaggatgta 12302194  T
Q  101 ttgccacatggggtggtacatgtatca 127  Q
    ||||||||||||||| |||||||||||    
T  12302193 ttgccacatggggtgatacatgtatca 12302167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 16096807 - 16096940
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtgggg-tccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgt 99  Q
    ||||||||||| |||| |||||||||||||||||||||||||| || ||||||| || | ||||||||||||||||||||||| |||||||||| |||||    
T  16096807 gatattttggtgagttaatctcacaaccacactttatcttctacttatgtgggggtctaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgt 16096906  T
Q  100 attgccacatggggtggtacatgtatcaccactc 133  Q
    |||||||||||  ||||||||||||||| |||||    
T  16096907 attgccacatgatgtggtacatgtatcatcactc 16096940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 135
Target Start/End: Complemental strand, 34817813 - 34817682
Alignment:
Q  4 attttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgtattg 103  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||  ||| ||||||||||||| ||||||||||||||||||||||||  || | ||||    
T  34817813 attttggtaaattcatctcacaaccacactttctcttctatttgtacgggatccaggttgccacatgtcagaattttgtatgggtgtaaggggagcattg 34817714  T
Q  104 ccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||||||  |||||||||||| |||||||    
T  34817713 ccacatgggggtgtacatgtatcatcactctt 34817682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 13780775 - 13780676
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||| |||||||| ||||||    
T  13780775 gatattttgataaattcatctcacaaccacactttctcttctatttatgtggggtccaggttgccacatgtcagaattttgtataggtgtaaagggtgta 13780676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 42026829 - 42026955
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||||| || ||||||||||||| ||||||| | |||||||||||||||||| ||||||| |  |||||||||||||| |||||||||  ||||||    
T  42026829 gatattttggcaaattcatctcacaactacactttcttttctatttgtgtggggtctaggttgcaagatgtcagaattttgtgtgggtgtaaggggtgta 42026928  T
Q  101 ttgccacatggggtggtacatgtatca 127  Q
    ||||||||||| |  ||||||||||||    
T  42026929 ttgccacatggaggtgtacatgtatca 42026955  T

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Target: chr2; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 39149332 - 39149201
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||||||||||||||| |||||| |||||||||||| ||||||||| ||||| |  || |||||| ||| |||||||| |||||||||| ||||||    
T  39149332 gatattttggtaagttcatcccacaactacactttatcttttatttgtgt-gggtctaaattaccacgtctcataattttgtgtgggtgtaaaaggtgta 39149234  T
Q  101 ttgccacatggggtggtacatgtatcaccactct 134  Q
    || |||||| ||||||||||||||||| ||||||    
T  39149233 ttaccacat-gggtggtacatgtatcatcactct 39149201  T

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Target: chr2; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 8896622 - 8896541
Alignment:
Q  2 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgta 83  Q
    |||||||||||| |||||||||||| |||||||| | ||||||||||||| ||| ||||||||||| |||||||||||||||    
T  8896622 atattttggtaaattcatctcacaatcacactttcttttctatttgtgtgaggttcaggttgccacatgtcagaattttgta 8896541  T

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Target: chr2; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 34895721 - 34895647
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||| |||||| ||||||| |||||||||  |||||||||||||||||||  ||||||||||||||||||||    
T  34895721 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactctt 34895647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 11825634 - 11825562
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||| |||||| ||||||| |||||||||  |||||||||||||||||||  ||||||||||||||||||    
T  11825634 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatggggatgtacatgtatcaccactc 11825562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 6518474 - 6518400
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||| |||||| ||||||| |||||||||| ||||||||| ||||||| |  ||||||||||||||||||||    
T  6518474 ttgccacatgtcaggattttgtgtgggtgtaaaaggtgtattgacacatggaggtgtacatgtatcaccactctt 6518400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 18491825 - 18491899
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||| ||| || ||||||| |||||||||  |||||||||||||||||||  ||||||||||||||||||||    
T  18491825 ttgccacatgttaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactctt 18491899  T

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Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 41281954 - 41281880
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||| |||||| ||||||| |||||||||  |||||||||||| ||||||  ||||||||||||||||||||    
T  41281954 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccatatgggggtgtacatgtatcaccactctt 41281880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 966814 - 966742
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||| |||||| ||||||| |||||||||  |||||||| ||||||||||  ||||||||||||||||||    
T  966814 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtatttccacatggggatgtacatgtatcaccactc 966742  T

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Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 43114677 - 43114749
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||| |||||| ||||||| |||||||||  |||||||||||||||| ||  ||||||||||||||||||    
T  43114677 ttgccacttgtcaggattttgtgtgggtgtaagaggtgtattgccacatgagggtgtacatgtatcaccactc 43114749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 12415432 - 12415368
Alignment:
Q  69 tgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactc 133  Q
    |||||||||||||| ||| |||||  ||||||||||||||||||   ||||||||||||||||||    
T  12415432 tgtcagaattttgtgtggatgtaagaggtgtattgccacatgggagtgtacatgtatcaccactc 12415368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 12427492 - 12427428
Alignment:
Q  69 tgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactc 133  Q
    |||||||||||||| ||| |||||  ||||||||||||||||||   ||||||||||||||||||    
T  12427492 tgtcagaattttgtgtggatgtaagaggtgtattgccacatgggagtgtacatgtatcaccactc 12427428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 16804088 - 16804160
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||| |||||||||||||| |||||||||  ||||||||| || || |||  ||||||||||||||||||    
T  16804088 ttgccacatgtcagaattttgtgtgggtgtaagaggtgtattgtcatataggggtgtacatgtatcaccactc 16804160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 16843370 - 16843442
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||| |||||||||||||| |||||||||  ||||||||| || || |||  ||||||||||||||||||    
T  16843370 ttgccacatgtcagaattttgtgtgggtgtaagaggtgtattgtcatataggggtgtacatgtatcaccactc 16843442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 12531643 - 12531569
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||| |||||| ||||||| |||||||||  |||||||||||| |||| |  |||||||||||| |||||||    
T  12531643 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccatatggaggtgtacatgtatcatcactctt 12531569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 4299400 - 4299328
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||| |||||| ||||||| |||||||||  | ||||||||||||||  |  ||||||||||||||||||    
T  4299400 ttgccacatgtcaggattttgtgtgggtgtaagagatgtattgccacatgaaggtgtacatgtatcaccactc 4299328  T

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Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 40613913 - 40613976
Alignment:
Q  45 ttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgt-aaatggtgtattgccac 107  Q
    ||||| |||||||| || ||||||||||||| |||||| ||||||| ||| |||||||||||||    
T  40613913 ttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 40613976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 117; Significance: 1e-59; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 41861736 - 41861868
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  41861736 gatattttggtaagtttatctcacaaccacactttatcttctatttgtatggggtccaggttgccacgtgtcagaattttgtatgggtgtaaagggtgta 41861835  T
Q  101 ttgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||||||| |||||||||||||||||||||    
T  41861836 ttgccacatggagtggtacatgtatcaccactc 41861868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 24001052 - 24000926
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  24001052 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgta 24000953  T
Q  101 ttgccacatggggtggtacatgtatca 127  Q
    |||||||||| ||||||||||||||||    
T  24000952 ttgccacatgaggtggtacatgtatca 24000926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 42538471 - 42538345
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  42538471 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgta 42538372  T
Q  101 ttgccacatggggtggtacatgtatca 127  Q
    |||||||||| ||||||||||||||||    
T  42538371 ttgccacatgaggtggtacatgtatca 42538345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 16180396 - 16180263
Alignment:
Q  2 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgtat 101  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||    
T  16180396 atattttggtaaattcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtgtggatgtaaaaggtgtat 16180297  T
Q  102 tgccacatggggtggtacatgtatcaccactctt 135  Q
    |||||||||||||||||||||||||| |||||||    
T  16180296 tgccacatggggtggtacatgtatcatcactctt 16180263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 5015455 - 5015583
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||| ||||||    
T  5015455 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtgagtgtaaaaggtgta 5015554  T
Q  101 ttgccacatggggtggtacatgtatcacc 129  Q
    |||||||||||||||||||||||||||||    
T  5015555 ttgccacatggggtggtacatgtatcacc 5015583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 5810964 - 5810830
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||| ||||||    
T  5810964 gatattttgataagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacatgtcaaaattttgtatgggtgtaaagggtgta 5810865  T
Q  101 ttgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||||||||||||||||||||||| |||||||    
T  5810864 ttgccacatggggtggtacatgtatcatcactctt 5810830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 32029857 - 32029731
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||| ||||||    
T  32029857 gatattttggtaaattcatctaacaaccacactttatcttctatttatgtggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgta 32029758  T
Q  101 ttgccacatggggtggtacatgtatca 127  Q
    |||||||||||||||||||||||||||    
T  32029757 ttgccacatggggtggtacatgtatca 32029731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 42972912 - 42973038
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  42972912 gatattttggtaagttcatctcacaaccacattttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaatggtgta 42973011  T
Q  101 ttgccacatggggtggtacatgtatca 127  Q
    ||||||||| || | ||||||||||||    
T  42973012 ttgccacataggatagtacatgtatca 42973038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 44326238 - 44326372
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||| | |||||||||| ||||||    
T  44326238 gatattttggtaagttcatctcacaaccacactttatcatctatttatgtgggatccagattgccacgtgtcagaattttatgtgggtgtaaagggtgta 44326337  T
Q  101 ttgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||||||| |||||||||||||||||||||||    
T  44326338 ttgccacatggtgtggtacatgtatcaccactctt 44326372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 44416974 - 44416841
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||| |||||| ||||||    
T  44416974 gatattttgataagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaaatttgtgtggatgtaaaaggtgta 44416875  T
Q  101 ttgccacatggggtggtacatgtatcaccactct 134  Q
    |||||||||| |||||||||||||||| ||||||    
T  44416874 ttgccacatgaggtggtacatgtatcatcactct 44416841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 26898442 - 26898310
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| | |||||||||| ||||||    
T  26898442 gatattttggtaagttcatcttacaaccacactttatattctatttgtgtggggtccaggttaccacgtgtcagaattttatgtgggtgtaaaaggtgta 26898343  T
Q  101 ttgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||||| || ||||||||||||||||||||    
T  26898342 ttgccacataggatggtacatgtatcaccactc 26898310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 43343664 - 43343532
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||| |||||| ||||||    
T  43343664 gatattttgataagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaaatttgtgtggatgtaaaaggtgta 43343565  T
Q  101 ttgccacatggggtggtacatgtatcaccactc 133  Q
    |||||||||| |||||||||||||||| |||||    
T  43343564 ttgccacatgaggtggtacatgtatcatcactc 43343532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 45326080 - 45326214
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||  | |||| |||||||||||| | |||||||||||||||||    
T  45326080 gatattttggtaagttcatctcacaatcacactttatcttctatttatgtggggtccagactaccacctgtcagaattttatgtgggtgtaaatggtgta 45326179  T
Q  101 ttgccacatggggtggtacatgtatcaccactctt 135  Q
    ||| |||||||||||||||||||||||||||||||    
T  45326180 ttgtcacatggggtggtacatgtatcaccactctt 45326214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 4638239 - 4638106
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||| |||||||| |||||| ||||||    
T  4638239 gatattttggtaagttcatctcacaaccatactttatcttctatttgtgtggggtctaggttaccacgtgtcagaatcttgtatggatgtaaagggtgta 4638140  T
Q  101 ttgccacatggggtggtacatgtatcaccactct 134  Q
    ||| ||| | ||||||||||||||||||||||||    
T  4638139 ttgtcacgtagggtggtacatgtatcaccactct 4638106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 27393300 - 27393174
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||| | |||||||||| | ||||    
T  27393300 gatatttttgtaagttcatctcacaaccacactttatcttctatttatgtggggtccaggttgcctcatgtcagaattttatgtgggtgtaaaggatgta 27393201  T
Q  101 ttgccacatggggtggtacatgtatca 127  Q
    |||||||||||||||||||||||||||    
T  27393200 ttgccacatggggtggtacatgtatca 27393174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 35069781 - 35069915
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||| | | |||||| | | ||    
T  35069781 gatattttggtaagttcatctcacaaccacactttatcttctatttatgtgaggtccaagttgccacgtgtcagaattttgtgtagatgtaaaggatata 35069880  T
Q  101 ttgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||||| || |||||||||||||| |||||||    
T  35069881 ttgccacataggatggtacatgtatcatcactctt 35069915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 38160619 - 38160505
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||| |||| ||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||  ||||||    
T  38160619 gatattttagtaacttcatctcacaactacactttatcttctatttatgtggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaggggtgta 38160520  T
Q  101 ttgccacatggggtg 115  Q
    |||||||||||||||    
T  38160519 ttgccacatggggtg 38160505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 133
Target Start/End: Original strand, 10573810 - 10573941
Alignment:
Q  2 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgtat 101  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||| || ||||||| | |||||||||| | |||||||||| | | |||    
T  10573810 atattttggtaaattcatctcacaaccacactttatcttctatttatgtggggtcaagattgccacatatcagaattttatgtgggtgtaaaggatatat 10573909  T
Q  102 tgccacatggggtggtacatgtatcaccactc 133  Q
    || |||||| ||||||||||||||||||||||    
T  10573910 tgtcacatgcggtggtacatgtatcaccactc 10573941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 9216361 - 9216487
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||  | |||||| | |||||||||||||| ||| |||||| ||||||    
T  9216361 gatattttggtaagttcatctcacaaccacattttatcttctatttgtgtggggtttaagttgccgcatgtcagaattttgtgtggatgtaaaaggtgta 9216460  T
Q  101 ttgccacatggggtggtacatgtatca 127  Q
    ||| |||||||||||||| || |||||    
T  9216461 ttgtcacatggggtggtatatatatca 9216487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 43317503 - 43317635
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||| ||| |||||||||||| |||||||  |||||||||||||||||||| || ||||||| |||||||||||||| |||||||||  ||||||    
T  43317503 gatattttgataaattcatctcacaatcacacttactcttctatttgtgtggggtctagattgccacatgtcagaattttgtgtgggtgtaaggggtgta 43317602  T
Q  101 ttgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||||   ||  ||||||||||||||||||    
T  43317603 ttgccacacaagggtgtacatgtatcaccactc 43317635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 5194271 - 5194139
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||| ||| |||||||||||| |||||||  |||||||||||||||||||| || ||||||| ||||| |||||||| |||||||||  | ||||    
T  5194271 gatattttgataaattcatctcacaatcacacttactcttctatttgtgtggggtctagattgccacatgtcaaaattttgtgtgggtgtaagggttgta 5194172  T
Q  101 ttgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||||   ||  ||||||||||||| ||||    
T  5194171 ttgccacacaagggtgtacatgtatcactactc 5194139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 135
Target Start/End: Complemental strand, 47279744 - 47279630
Alignment:
Q  21 tcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtaca 120  Q
    |||||||||||||||||||||||||| | | || ||||| || |||| | |||||||||| | ||||| |||| ||||||||| || ||||| |||||||    
T  47279744 tcacaaccacactttatcttctatttatataggatccagattaccacatatcagaattttatgtgggtataaagggtgtattgtcagatgggatggtaca 47279645  T
Q  121 tgtatcaccactctt 135  Q
    |||||||||||||||    
T  47279644 tgtatcaccactctt 47279630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 24280635 - 24280555
Alignment:
Q  2 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgt 82  Q
    |||||||||||| |||||||||||| |||||||| |||||||||||||||||||||| |||||||  | ||||||||||||    
T  24280635 atattttggtaaattcatctcacaatcacactttctcttctatttgtgtggggtccaagttgccatatatcagaattttgt 24280555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 61 - 134
Target Start/End: Original strand, 40237039 - 40237112
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactct 134  Q
    ||||||| |||||| ||||||| |||||||||  |||||||||||||||||||  |||||||||||||||||||    
T  40237039 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactct 40237112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 31408613 - 31408539
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||| |||||| ||||| | |||||||||  ||||||||| |||||||||  ||||||||||||||||||||    
T  31408613 ttgccacatgtcaggattttatgtgggtgtaagaggtgtattgtcacatgggggtgtacatgtatcaccactctt 31408539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 33384991 - 33385065
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||| | |||| |||||||||||||||||  ||||||||| |||||||||   |||||||||||||||||||    
T  33384991 ttgccacatatcaggattttgtatgggtgtaagaggtgtattgtcacatgggggtttacatgtatcaccactctt 33385065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 27535211 - 27535137
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||| |||||||||||||| ||| |||||  | ||||||||||||||| |   |||||||||||||||||||    
T  27535211 ttgccacatgtcagaattttgtgtggatgtaagagatgtattgccacatggaggaatacatgtatcaccactctt 27535137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 31513407 - 31513481
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||| |||||| ||||||| | | |||||  |||||||||||||||  ||  ||||||||||||||||||||    
T  31513407 ttgccacatgtcaggattttgtgtagatgtaagaggtgtattgccacataagggtgtacatgtatcaccactctt 31513481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 107
Target Start/End: Complemental strand, 35522947 - 35522902
Alignment:
Q  63 gccacgtgtcagaattttgtatgggtg-taaatggtgtattgccac 107  Q
    ||||||||||||| |||||| |||||| ||||||||||||||||||    
T  35522947 gccacgtgtcagatttttgtgtgggtgttaaatggtgtattgccac 35522902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 117; Significance: 1e-59; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 7292807 - 7292935
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||    
T  7292807 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtttgtgtgtaaagggtgta 7292906  T
Q  101 ttgccacatggggtggtacatgtatcacc 129  Q
    |||||||||||||||||||||||||||||    
T  7292907 ttgccacatggggtggtacatgtatcacc 7292935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 9698373 - 9698247
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  9698373 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgta 9698274  T
Q  101 ttgccacatggggtggtacatgtatca 127  Q
    |||||||||| ||||||||||||||||    
T  9698273 ttgccacatgaggtggtacatgtatca 9698247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 21279989 - 21280123
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||| ||    
T  21279989 gatattttggtaaattcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaagggtata 21280088  T
Q  101 ttgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||||||||||||||||||||||| |||||||    
T  21280089 ttgccacatggggtggtacatgtatcatcactctt 21280123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 26670049 - 26669915
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||    
T  26670049 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggagtccaggttgccacgtgtcagaattttgtgtgggtgtaaagggtgta 26669950  T
Q  101 ttgccacatggggtggtacatgtatcaccactctt 135  Q
    |||||||||| |||||||||| ||||||| |||||    
T  26669949 ttgccacatgaggtggtacatatatcaccgctctt 26669915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 13743261 - 13743130
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| | | ||    
T  13743261 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaatcttgtgtgggtgtaaaggatata 13743162  T
Q  101 ttgccacatggggtggtacatgtatcaccact 132  Q
    ||||||||| ||||||||||||||||||||||    
T  13743161 ttgccacatagggtggtacatgtatcaccact 13743130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 13748761 - 13748630
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| | | ||    
T  13748761 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaatcttgtgtgggtgtaaaggatata 13748662  T
Q  101 ttgccacatggggtggtacatgtatcaccact 132  Q
    ||||||||| ||||||||||||||||||||||    
T  13748661 ttgccacatagggtggtacatgtatcaccact 13748630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 7367609 - 7367735
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||| |||||||||| ||||||    
T  7367609 gatattttggtaagttcatctcacaaccacactttattttctatttatgtgggatccaggttgccacgtgtcagaattttgtgtgggtgtaaagggtgta 7367708  T
Q  101 ttgccacatggggtggtacatgtatca 127  Q
    |||||||||||||||||||||||||||    
T  7367709 ttgccacatggggtggtacatgtatca 7367735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 30736042 - 30736174
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| ||||||    
T  30736042 gatattttggtaagttcatctcacaatcacactttatcttctatttatgtggggtccaggttgccacgtgtcagaattttgtgtggatgtaaagggtgta 30736141  T
Q  101 ttgccacatggggtggtacatgtatcaccactc 133  Q
    |||||||||||| |||||||||||||| |||||    
T  30736142 ttgccacatgggatggtacatgtatcatcactc 30736174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 3213460 - 3213594
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||| ||||| ||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||| | |||||||||| ||||||    
T  3213460 gatattttggtaaattcatttcacaaccatactttatcttctatttatgtggggtccagattgccacgtgtcagaattttatgtgggtgtaaagggtgta 3213559  T
Q  101 ttgccacatggggtggtacatgtatcaccactctt 135  Q
    |||||||||||||||||||||||||||||||||||    
T  3213560 ttgccacatggggtggtacatgtatcaccactctt 3213594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 21293717 - 21293584
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| | |||||||||| ||||||    
T  21293717 gatattttggtaaattcatttcacaaccacactttatcttctatttatgtggggtccagattgccacgtgtcagaattttatgtgggtgtaaagggtgta 21293618  T
Q  101 ttgccacatggggtggtacatgtatcaccactct 134  Q
    |||||||||| |||||||||||||||||||||||    
T  21293617 ttgccacatgaggtggtacatgtatcaccactct 21293584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 24204027 - 24203895
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| ||||||    
T  24204027 gatattttggtaagttcatctcacaaccacactttatattctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtggatgtaaagggtgta 24203928  T
Q  101 ttgccacatggggtggtacatgtatcaccactc 133  Q
    ||| ||||||| ||||||||||||||| |||||    
T  24203927 ttgtcacatggagtggtacatgtatcatcactc 24203895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 3 - 135
Target Start/End: Original strand, 26466861 - 26466993
Alignment:
Q  3 tattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgtatt 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||| |||||||||||||||||| ||||||||    
T  26466861 tattttggtaagttcatctcacaaccacactttatcttctatttgtttggggttcaggttgccacgtatcaggattttgtatgggtgtaaaaggtgtatt 26466960  T
Q  103 gccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||| |||||||| |||||||| |||||||    
T  26466961 gccacatagggtggtaaatgtatcatcactctt 26466993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 7273375 - 7273241
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||  |||||    
T  7273375 gatattttggtaagttcatctcacaatcacactttatcttctatttatgtggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaagagtgta 7273276  T
Q  101 ttgccacatggggtggtacatgtatcaccactctt 135  Q
    || ||||||||||||||||||| |||| |||||||    
T  7273275 ttaccacatggggtggtacatgcatcatcactctt 7273241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 2 - 132
Target Start/End: Original strand, 30014404 - 30014534
Alignment:
Q  2 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgtat 101  Q
    |||||||||||||||||||||||||||| |||||||||||||||| | ||||||||| ||| ||||||||||||||||||| ||| |||||| |||||||    
T  30014404 atattttggtaagttcatctcacaaccatactttatcttctatttatatggggtccaagttaccacgtgtcagaattttgtgtggatgtaaagggtgtat 30014503  T
Q  102 tgccacatggggtggtacatgtatcaccact 132  Q
    |||||||||||||| ||||||||||| ||||    
T  30014504 tgccacatggggtgatacatgtatcatcact 30014534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 33242523 - 33242595
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||| |||||| ||||||| |||||||||  |||||||||||||||||||  ||||||||||||||||||    
T  33242523 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactc 33242595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 27441662 - 27441736
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||| |||||| ||||| | |||||||||  ||||||||||||||||||   ||||||||||||||||||||    
T  27441662 ttgccacatgtcaggattttatgtgggtgtaagaggtgtattgccacatgggtgtgtacatgtatcaccactctt 27441736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 134
Target Start/End: Original strand, 33254034 - 33254107
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactct 134  Q
    ||||||| |||| | ||||||| ||||| |||| ||||||||||||||||| |  |||||||||||||||||||    
T  33254034 ttgccacatgtccggattttgtgtgggtataaaaggtgtattgccacatggaggtgtacatgtatcaccactct 33254107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 31109202 - 31109128
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||| |||||| ||||||| |||||||||  ||||||||||||||| |||  | |||||| ||| |||||||    
T  31109202 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacataggggtgcacatgtgtcaacactctt 31109128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 113; Significance: 2e-57; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 5489836 - 5489968
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||| ||||||    
T  5489836 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttatgtgggtgtaaagggtgta 5489935  T
Q  101 ttgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||||||||||||||||||||||| |||||    
T  5489936 ttgccacatggggtggtacatgtatcatcactc 5489968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 48499002 - 48498870
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||| ||||||    
T  48499002 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttatgtgggtgtaaagggtgta 48498903  T
Q  101 ttgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||||||||||||||||||||||| |||||    
T  48498902 ttgccacatggggtggtacatgtatcatcactc 48498870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 43571126 - 43570994
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||| ||||||    
T  43571126 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttatgtgggtgtaaagggtgta 43571027  T
Q  101 ttgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||||||||||||||||| ||||| |||||    
T  43571026 ttgccacatggggtggtacatatatcatcactc 43570994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 7447885 - 7448019
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||    
T  7447885 gatattttgataagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgta 7447984  T
Q  101 ttgccacatggggtggtacatgtatcaccactctt 135  Q
    |||||||||||  |||||||||||||| |||||||    
T  7447985 ttgccacatggaatggtacatgtatcatcactctt 7448019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 4401388 - 4401521
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||| |||||||||| ||||||    
T  4401388 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaatatgccacgtgtcagaattttgtgtgggtgtaaagggtgta 4401487  T
Q  101 ttgccacatggggtggtacatgtatcaccactct 134  Q
    ||||||||| ||||||||||||||||| ||||||    
T  4401488 ttgccacatagggtggtacatgtatcatcactct 4401521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 37814838 - 37814969
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||| |||||| ||||||    
T  37814838 gatattttggtaaattcatttcacaaccacactttatcttctatttatgtggggtccagattgccacgtgtcagaattttatatggatgtaaagggtgta 37814937  T
Q  101 ttgccacatggggtggtacatgtatcaccact 132  Q
    ||||||||||||||||||||||||||||||||    
T  37814938 ttgccacatggggtggtacatgtatcaccact 37814969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 24769539 - 24769405
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||  |||||    
T  24769539 gatattttggtaagttcttatcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtggatgtaaagagtgta 24769440  T
Q  101 ttgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||||||||||||||||||||||| |||||||    
T  24769439 ttgccacatggggtggtacatgtatcatcactctt 24769405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 23989563 - 23989431
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| ||||||    
T  23989563 gatattttggtaaatttatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaatcttgtgtgggtgtaaagggtgta 23989464  T
Q  101 ttgccacatggggtggtacatgtatcaccactc 133  Q
    |||||| || |||||||||||||||||||||||    
T  23989463 ttgccatatagggtggtacatgtatcaccactc 23989431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 750345 - 750211
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||| ||||||    
T  750345 gatattttgataaattcatctcaaaaccacactttatcttctatttgtgtggggtccatgttaccacgtgtcagaattttgtgtgggtgtaaagggtgta 750246  T
Q  101 ttgccacatggggtggtacatgtatcaccactctt 135  Q
    |||||||||||| |||||||||||||| |||||||    
T  750245 ttgccacatgggatggtacatgtatcatcactctt 750211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 50448300 - 50448167
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||| |||||||||||| ||||||||| |||||||||||||| |||||| |||| ||||||||||||||||||||||| |||||||||| ||||||    
T  50448300 gatatttttgtaagttcatcttacaaccacattttatcttctatttttgtgggttccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgta 50448201  T
Q  101 ttgccacatggggtggtacatgtatcaccactct 134  Q
    ||||||||||||||||||||||||||| ||||||    
T  50448200 ttgccacatggggtggtacatgtatcatcactct 50448167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 2497602 - 2497469
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||| ||| |||||||||||||||| | ||||| |||| ||||||    
T  2497602 gatattttggtaagttcatctcacaaccacactttatcatctatttatgtgggatccagattgtcacgtgtcagaattttatgtgggtataaagggtgta 2497503  T
Q  101 ttgccacatggggtggtacatgtatcaccactct 134  Q
    ||||||||||| ||||||||||||||||||||||    
T  2497502 ttgccacatggtgtggtacatgtatcaccactct 2497469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 4888103 - 4888235
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||  |||||| || |||||||||||| ||| |||||| | | ||    
T  4888103 gatattttggtaagtttatctcacaaccacactttattttctatttgtgtggtgtccaaattgccatgtatcagaattttgtgtggatgtaaaggatata 4888202  T
Q  101 ttgccacatggggtggtacatgtatcaccactct 134  Q
    ||||||||| ||||||||||||||||| ||||||    
T  4888203 ttgccacat-gggtggtacatgtatcatcactct 4888235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 35000093 - 35000021
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||| |||||| |||||||||||||||||  | |||||||||||||||||  ||||||||||||||||||    
T  35000093 ttgccacatgtcaggattttgtatgggtgtaagagatgtattgccacatgggggtgtacatgtatcaccactc 35000021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 35003414 - 35003488
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||| |||||| ||||||| |||||||||  |||||||||||||||||||  || |||||||||||||||||    
T  35003414 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtgcatgtatcaccactctt 35003488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 44112797 - 44112871
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||| |||||||||||||| |||||||||  ||||||||||||||||  |  ||||||||||||||||||||    
T  44112797 ttgccacatgtcagaattttgtgtgggtgtaagaggtgtattgccacatgaaggtgtacatgtatcaccactctt 44112871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 45705945 - 45706017
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||| |||||| ||||||| |||||||||  ||||||||||||||||| |  ||||||||||||||||||    
T  45705945 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatggaggtgtacatgtatcaccactc 45706017  T

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Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 48119748 - 48119817
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcacca 130  Q
    ||||||| |||||| ||||||| |||||||||  ||||||||||||| |||||  |||||||||||||||    
T  48119748 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacgtgggggtgtacatgtatcacca 48119817  T

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Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 45639712 - 45639640
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||| ||| || ||||||| |||||||||  |||||||||||||| ||||  ||||||||||||||||||    
T  45639712 ttgccacatgttaggattttgtgtgggtgtaagaggtgtattgccacaagggggtgtacatgtatcaccactc 45639640  T

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Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 26585582 - 26585656
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||| |||||| ||||||| ||| |||||  | ||||||||| |||||||  ||||||||||||||||||||    
T  26585582 ttgccacatgtcaggattttgtgtggatgtaagagatgtattgccgcatgggggtgtacatgtatcaccactctt 26585656  T

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Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 38113175 - 38113101
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||| |||||| ||||||| |||||||||  ||||||||| ||||||| |  ||||||| ||||||||||||    
T  38113175 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgtcacatggaggtgtacatgaatcaccactctt 38113101  T

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Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 134
Target Start/End: Complemental strand, 45427722 - 45427652
Alignment:
Q  64 ccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactct 134  Q
    |||| |||||| ||||||| ||| || ||  |||||||||||||||||||  |||||||||||||||||||    
T  45427722 ccacatgtcaggattttgtgtggatggaagaggtgtattgccacatggggatgtacatgtatcaccactct 45427652  T

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Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 134
Target Start/End: Original strand, 41065271 - 41065344
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactct 134  Q
    ||||||| |||||| |||||||  || |||||  |||||||||||||||||||  |||||| ||||||||||||    
T  41065271 ttgccacatgtcaggattttgtgcggatgtaagaggtgtattgccacatgggggtgtacatatatcaccactct 41065344  T

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Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 45044570 - 45044634
Alignment:
Q  44 tttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgt-aaatggtgtattgccac 107  Q
    |||||| |||||||| || || || ||||||| |||||||||||||| |||||||||||||||||    
T  45044570 tttgtgcggggtccatgtggctacatgtcagatttttgtatgggtgtcaaatggtgtattgccac 45044634  T

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Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 46168503 - 46168555
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatgggg 113  Q
    ||||||| ||||| |||||||| |||||||||  | |||||||||||||||||    
T  46168503 ttgccacatgtcataattttgtgtgggtgtaagagatgtattgccacatgggg 46168555  T

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Target: scaffold0119 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 745 - 879
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||    
T  745 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggagtccaggttgccacgtgtcagaattttgtgtgggtgtaaagggtgta 844  T
Q  101 ttgccacatggggtggtacatgtatcaccactctt 135  Q
    |||||||||| |||||||||| ||||||| |||||    
T  845 ttgccacatgaggtggtacatatatcaccgctctt 879  T

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Target: scaffold0187 (Bit Score: 105; Significance: 1e-52; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 14228 - 14097
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||| ||||||    
T  14228 gatatttttgtaagttcatctcacaaccacactttatcttctatttgtgtggg-tccaggttgccacgtgtcagaattttgtgtggatgtaaagggtgta 14130  T
Q  101 ttgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||||||||||||||||||||||| |||||    
T  14129 ttgccacatggggtggtacatgtatcatcactc 14097  T

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Target: scaffold0187; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 24556 - 24425
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||| ||||||    
T  24556 gatatttttgtaagttcatctcacaaccacactttatcttctatttgtgtggg-tccaggttgccacgtgtcagaattttgtgtggatgtaaagggtgta 24458  T
Q  101 ttgccacatggggtggtacatgtatcaccactc 133  Q
    ||||||||||||||||||||||||||| |||||    
T  24457 ttgccacatggggtggtacatgtatcatcactc 24425  T

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Target: scaffold0385 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 11311 - 11443
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||| ||||||||||||||||| | ||||||||| |||||    
T  11311 gatattttggtaagttcatctcacaaccacactttatcttctattgatgtggggtccaagttgctacgtgtcagaattttgtgtaggtgtaaatagtgta 11410  T
Q  101 ttgccacatggggtggtacatgtatcaccactc 133  Q
    |||||||||||| |||||||||||||| |||||    
T  11411 ttgccacatgggatggtacatgtatcatcactc 11443  T

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Target: scaffold0157 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 23461 - 23335
Alignment:
Q  1 gatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaatggtgta 100  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||| ||| ||  ||||||||||| |||||||||| ||||||||||  |||||    
T  23461 gatattttggtaagttcatcttacaatcacactttatcttctatttgtgtgaggttcaatttgccacgtgttagaattttgtgtgggtgtaaaacgtgta 23362  T
Q  101 ttgccacatggggtggtacatgtatca 127  Q
    ||| ||||||||||||| |||||||||    
T  23361 ttgtcacatggggtggtgcatgtatca 23335  T

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Target: scaffold0003 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 45699 - 45625
Alignment:
Q  61 ttgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcaccactctt 135  Q
    ||||||| |||||| ||||| | |||||||||  ||||||||||||||||||   ||||||||||||||||||||    
T  45699 ttgccacatgtcaggattttatgtgggtgtaagaggtgtattgccacatgggtgtgtacatgtatcaccactctt 45625  T

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Target: scaffold0100 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 127
Target Start/End: Complemental strand, 35421 - 35370
Alignment:
Q  76 attttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatca 127  Q
    |||||||||||||||||  |||||||||||||||||||  ||||||||||||    
T  35421 attttgtatgggtgtaagaggtgtattgccacatgggggtgtacatgtatca 35370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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