View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17380_low_7 (Length: 603)
Name: NF17380_low_7
Description: NF17380
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17380_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 456; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 456; E-Value: 0
Query Start/End: Original strand, 107 - 595
Target Start/End: Original strand, 37859136 - 37859624
Alignment:
| Q |
107 |
aaaacagtctcaaaaatactcaacctaagcctaccatcaacacgttctgcatggaaataaggagtagtagaaggagaagcaatagcttctaatatcaacc |
206 |
Q |
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| T |
37859136 |
aaaacagtctcaaaaatactcaacctaagcctaccatcaacacgttctgcatggaaataaggagtagtagaaggagaagcaatagcttctaatatcaacc |
37859235 |
T |
|
| Q |
207 |
taccaccttcgcgatgaggcctaacatgaacaccaccaaaatcagttattgatgtgagtggtggaggaaagttacaagaagctttattaactcttctaga |
306 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37859236 |
taccaccttcgcgatgaggcctaacatgaacaccaccaaaatcagttattgaagtgagtggtggaggaaagttacaagaagctttattaactcttctaga |
37859335 |
T |
|
| Q |
307 |
cacacaattattcatgttgttattgttaacatcatttcttgtgtcagaagaaaataatgaaacatcaatatcactactttcaccagcattgctaccagtt |
406 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37859336 |
cacacaattattcatgttgttattgttaacatcatttcttgtgtcagaagaaaataatgaaacatcaatatcactactttcaccagcattgctaccagtt |
37859435 |
T |
|
| Q |
407 |
tcactcccaaggctttcagtgcacatttctaagctcttttcacttagcattgatgaggaacgtttcacagtaggatgaacatagactttaccatttgcat |
506 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
37859436 |
tcactcccaaggctttcagtgcacatttctaagctcttttcacttagcattgatgaggaacgtttcacagtaggatgaacatagacgttaccatttgcat |
37859535 |
T |
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| Q |
507 |
tttcagttttgttagtttctgttaaagcttgaaggaaactccagctagattttgtgtcannnnnnncacattcattgttgatgatgatg |
595 |
Q |
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||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
37859536 |
tttcaattttgttagtttctgttaaagcttgaaggaaactccagctagattttgtgtcatttttttcacattcattgttgatgatgatg |
37859624 |
T |
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