View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17380_low_73 (Length: 221)
Name: NF17380_low_73
Description: NF17380
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17380_low_73 |
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Alignment Details
Target: chr4 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 21 - 198
Target Start/End: Original strand, 53598584 - 53598761
Alignment:
| Q |
21 |
atactacaattgggaagtgttcatggaccaaaataatcgatccttacaattttaaaaaataattatgacacatcttatgattnnnnnnntaattattcgc |
120 |
Q |
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| T |
53598584 |
atactacaattgggaagtgttcatggaccaaaataatcgatccttacaattttaaaaaataattatgacacatcttatgattaaaaaaataattattcgc |
53598683 |
T |
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| Q |
121 |
aaacgatctatttaattaaacaacaatggttnnnnnnnttatgacacatctttctgacacacaacttgcccaagatta |
198 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |
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| T |
53598684 |
aaacgatctatttaattaaacaacaatggttaaaaaaattatgacacatctttccgacacacaacttgcccaagatta |
53598761 |
T |
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