View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17381_high_9 (Length: 235)
Name: NF17381_high_9
Description: NF17381
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17381_high_9 |
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Alignment Details
Target: chr1 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 37062644 - 37062423
Alignment:
| Q |
1 |
aagacgtcatgcgcttcagctcctgagacacctgtctcagtttagccgaaagcgacgatggacgcttctcaagctggcttgccagaaacgcggttgcagt |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |
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| T |
37062644 |
aagacgtcatgcgcttcagctcctgagacacctgtctcagtttagccgaaagcgacgatggacgcttctcaagctggcttgccagaaacgccgtttcagt |
37062545 |
T |
|
| Q |
101 |
gtctccaccgcgaatattctgaacggaaacggagtcatcacgtacgttcaatgttatctccaccatttcaccatcgtccttgaagcttgcacttttgttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37062544 |
gtctccaccgcgaatattctgaacggaaacggagtcatcacgtacgttcaatgttatctccaccatttcaccatcgtccttgaagcttgcacttttgttc |
37062445 |
T |
|
| Q |
201 |
ttgcttcggtttcgttgttttt |
222 |
Q |
| |
|
|||||||||||||||||||||| |
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|
| T |
37062444 |
ttgcttcggtttcgttgttttt |
37062423 |
T |
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