View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17383_high_8 (Length: 315)
Name: NF17383_high_8
Description: NF17383
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17383_high_8 |
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Alignment Details
Target: chr2 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 15882060 - 15881823
Alignment:
| Q |
1 |
ttgtgtgtgaaataagaatcatttattagcgtattattggattatttctaaacca------ccacacac--aattataaagatgaagttaatcactcaag |
92 |
Q |
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| T |
15882060 |
ttgtgtgtgaaataagaatcacttattagcgtattattagattatttccaaataaaaaataccagacacgtaaatataaaaat-----taatcactcaag |
15881966 |
T |
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| Q |
93 |
tcgtataggatttgaaacaacaaaataat----acttgatcaatatcaaattcatatttaaatttgagaatctaattaagctagaatggaggtacattat |
188 |
Q |
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| T |
15881965 |
tcgtataggatttgaaacaacaaaataattaatatttgatcaatatcaaactcatatttaaatttgagaatctaattaagctagaatggaggtacattat |
15881866 |
T |
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| Q |
189 |
ctcatccaaacatccttaaatagcatatggtagattaagctac |
231 |
Q |
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| T |
15881865 |
ctcatccaaacatccttaaatagcatatggtagattaagctac |
15881823 |
T |
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