View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17383_low_18 (Length: 204)
Name: NF17383_low_18
Description: NF17383
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17383_low_18 |
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Alignment Details
Target: chr5 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 20 - 186
Target Start/End: Original strand, 2140454 - 2140620
Alignment:
| Q |
20 |
cttataaaattatgtttgactatatctcattcaattcaagaacctaatagtggtataatatattatacggatactaactaaaaaagttgtcaatatttag |
119 |
Q |
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| T |
2140454 |
cttataaaattatgtttgactatatctcattcaatttaagaacctaatagtggtataaaatattataaggataccaactaaaaaagttgtcaatatttag |
2140553 |
T |
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| Q |
120 |
tgtccgaaacaaactccaaacaagattttcttaaaaagagggaacttatgaaaaaacaagatgatgt |
186 |
Q |
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| T |
2140554 |
tgtccgacacaaactccaaacaagattttcttaaaaagagggaacttatgaaaaaacaagatgatgt |
2140620 |
T |
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