View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17383_low_8 (Length: 360)
Name: NF17383_low_8
Description: NF17383
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17383_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 16 - 349
Target Start/End: Original strand, 7163564 - 7163897
Alignment:
| Q |
16 |
cacttctctcatctatcacatttcgataagcttctcttgttttttggtatgctacactttaaaccctatatccaataataacgagtttcattggcatcca |
115 |
Q |
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| T |
7163564 |
cacttctctcatctatcacatttcgataagcttctcttgttttttggtatgctacactttaaaccctatatccaataataacgagtttcattggcatcca |
7163663 |
T |
|
| Q |
116 |
cctcttacacacaataattgcatcacagttgaagacatataaaatcttctaagaggtatttaacgagtgtaactcaaatttactccttaattttattgac |
215 |
Q |
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| T |
7163664 |
cctcttacacacaataattgcatcacagttgaagacatataaaatcttctaagaggtatttaacgagtgtaactcaaatttactccttaattttattgac |
7163763 |
T |
|
| Q |
216 |
gaggatattgataatcaaatctaagatcctaatatgattaaatatgatattataggaagtggatatgacatattgcgaagcgagttgttttcattgcttg |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||| |
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| T |
7163764 |
gaggatattgataatcaaatctaagatcctaatatgattaaatatgatattatatgaagaggatatgacatattgcgaagcgagttgttttcattgattg |
7163863 |
T |
|
| Q |
316 |
ttattgatgctatacataggcttaatattcttgg |
349 |
Q |
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|||||||||||||||||||||| |||||| |||| |
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| T |
7163864 |
ttattgatgctatacataggctgaatattattgg |
7163897 |
T |
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