View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17384_low_6 (Length: 346)

Name: NF17384_low_6
Description: NF17384
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17384_low_6
NF17384_low_6
[»] chr1 (10 HSPs)
chr1 (18-327)||(35943846-35944155)
chr1 (239-326)||(101494-101580)
chr1 (239-326)||(101520-101607)
chr1 (239-320)||(22816092-22816173)
chr1 (235-320)||(35944100-35944185)
chr1 (263-326)||(22819174-22819237)
chr1 (256-326)||(50105690-50105760)
chr1 (233-326)||(22819177-22819270)
chr1 (239-325)||(897025-897110)
chr1 (239-325)||(40212295-40212381)
[»] chr3 (9 HSPs)
chr3 (235-320)||(45361984-45362069)
chr3 (257-320)||(36750793-36750856)
chr3 (235-318)||(45362023-45362105)
chr3 (274-325)||(39297729-39297780)
chr3 (257-326)||(38217489-38217558)
chr3 (257-293)||(31836484-31836520)
chr3 (235-315)||(36750756-36750836)
chr3 (257-293)||(44518071-44518107)
chr3 (261-297)||(50626758-50626794)
[»] chr8 (15 HSPs)
chr8 (241-326)||(14547778-14547863)
chr8 (260-326)||(30112375-30112441)
chr8 (257-326)||(27976766-27976835)
chr8 (257-326)||(28034035-28034104)
chr8 (239-325)||(325225-325311)
chr8 (257-327)||(27870979-27871049)
chr8 (239-326)||(41175231-41175318)
chr8 (239-326)||(41175204-41175291)
chr8 (260-326)||(195631-195697)
chr8 (260-326)||(310468-310534)
chr8 (256-325)||(325253-325322)
chr8 (257-326)||(1364150-1364219)
chr8 (274-326)||(5668181-5668233)
chr8 (235-302)||(32910133-32910198)
chr8 (257-293)||(42123043-42123079)
[»] chr4 (15 HSPs)
chr4 (235-326)||(50533370-50533461)
chr4 (256-326)||(12766885-12766955)
chr4 (235-326)||(54357904-54357994)
chr4 (239-320)||(10554944-10555025)
chr4 (236-324)||(39195917-39196004)
chr4 (256-326)||(22450170-22450240)
chr4 (226-326)||(20459059-20459159)
chr4 (264-326)||(6724909-6724971)
chr4 (239-290)||(10555416-10555467)
chr4 (255-320)||(6724917-6724982)
chr4 (256-293)||(45828492-45828529)
chr4 (256-312)||(34320946-34321002)
chr4 (235-315)||(50533339-50533419)
chr4 (257-293)||(52280940-52280976)
chr4 (235-315)||(54357945-54358025)
[»] chr5 (2 HSPs)
chr5 (256-326)||(12442278-12442348)
chr5 (256-326)||(6761068-6761138)
[»] chr7 (13 HSPs)
chr7 (235-320)||(26586208-26586293)
chr7 (256-324)||(47681563-47681631)
chr7 (256-320)||(38363912-38363976)
chr7 (239-326)||(37002878-37002965)
chr7 (256-324)||(30322758-30322826)
chr7 (264-326)||(32404788-32404850)
chr7 (235-324)||(21079824-21079912)
chr7 (276-325)||(28838165-28838214)
chr7 (235-324)||(30059750-30059839)
chr7 (256-326)||(5250776-5250846)
chr7 (256-326)||(35436256-35436326)
chr7 (256-326)||(37489813-37489883)
chr7 (235-288)||(47681530-47681583)
[»] chr6 (4 HSPs)
chr6 (255-326)||(6686859-6686930)
chr6 (256-320)||(2284826-2284890)
chr6 (257-320)||(29938661-29938724)
chr6 (257-293)||(2230426-2230462)
[»] chr2 (5 HSPs)
chr2 (239-325)||(25903701-25903787)
chr2 (256-325)||(12032676-12032745)
chr2 (239-326)||(36452433-36452520)
chr2 (256-325)||(25903729-25903798)
chr2 (256-320)||(34009497-34009561)


Alignment Details
Target: chr1 (Bit Score: 231; Significance: 1e-127; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 18 - 327
Target Start/End: Original strand, 35943846 - 35944155
Alignment:
Q  18 atccaacggttgccattaattcgcagtaccttcgtgatgcatttgttcgctacaaatagcatagctcatctaaaaattaaaataaagattttcatctctt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  35943846 atccaacggttgccattaattcgcagtaccttcgtgatgcatttgttcgctacgaatagcatagctcttctaaaaattaaaataaagattttcatctctt 35943945  T
Q  118 gtcctctcctctccccctaaaattaagctttcatctttactttagactccccataaaaacgtcaagaatctgagataaatatcatattcagcctgttgaa 217  Q
    ||||||||||||||||| ||||||||||||||||||||||||  |||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  35943946 gtcctctcctctccccccaaaattaagctttcatctttacttcggacttcccatgaaaacgtc-agaatctgagataaatatcatattcagcctgttgaa 35944044  T
Q  218 aagatact-cttccagtttcaaatataagaaaggattccttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaat 316  Q
    |||||||| ||||| ||||||||||||| ||| ||||| |||||||||||| |||| ||||||||||||||| |||||||||||||| ||||||||||||    
T  35944045 aagatactccttccggtttcaaatataataaaagattcattttttaggttcgttgaataattaatgtatctgatctacattgtaaagcagatacattaat 35944144  T
Q  317 tatttaatgat 327  Q
    |||| ||||||    
T  35944145 tattcaatgat 35944155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 239 - 326
Target Start/End: Original strand, 101494 - 101580
Alignment:
Q  239 atataagaaaggattccttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaatga 326  Q
    |||||||||| ||||| ||||||||||||||||| ||||||||||||||||| |||| ||||||  |||||||||||||||| |||||    
T  101494 atataagaaaagattc-ttttttaggttcattgaataattaatgtatctggtttacaatgtaaaccagatacattaattattcaatga 101580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 326
Target Start/End: Complemental strand, 101607 - 101520
Alignment:
Q  239 atataagaaaggattccttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaatga 326  Q
    ||||| |||| ||||| |||  |||||||||||| ||||||||||||||||| |||||||||||  |||||||||||||||| |||||    
T  101607 atatacgaaaagattcttttcgtaggttcattgaataattaatgtatctggtttacattgtaaaccagatacattaattattcaatga 101520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 239 - 320
Target Start/End: Complemental strand, 22816173 - 22816092
Alignment:
Q  239 atataagaaaggattccttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatt 320  Q
    ||||||||||  |||| |||| ||||||||||||  || ||||||||||  ||| |||||||||||||||||||||||||||    
T  22816173 atataagaaaatattctttttgtaggttcattgaacaactaatgtatctaatcttcattgtaaagtagatacattaattatt 22816092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 235 - 320
Target Start/End: Complemental strand, 35944185 - 35944100
Alignment:
Q  235 tcaaatataagaaaggattccttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatt 320  Q
    ||||||||||||||  |||| ||||||||| ||||||| ||||||||||||||| | |||| |||| |  ||||||||||||||||    
T  35944185 tcaaatataagaaaatattctttttttaggatcattgaataattaatgtatctgctttacaatgtagatcagatacattaattatt 35944100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 263 - 326
Target Start/End: Original strand, 22819174 - 22819237
Alignment:
Q  263 ggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaatga 326  Q
    |||||||||| |||||||||||| |||||| |||||||||  ||||||||||| |||| |||||    
T  22819174 ggttcattgaataattaatgtatatggtcttcattgtaaatcagatacattaactattcaatga 22819237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 326
Target Start/End: Original strand, 50105690 - 50105760
Alignment:
Q  256 ttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaatga 326  Q
    |||||||| |||||||| |||| |||||||||| |||| | | |||| |||||||||||||||| ||||||    
T  50105690 ttttttagattcattgaataatcaatgtatctgatctataatataaactagatacattaattatctaatga 50105760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 233 - 326
Target Start/End: Complemental strand, 22819270 - 22819177
Alignment:
Q  233 tttcaaatataagaaaggattccttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaatga 326  Q
    ||||| |||||||||| ||||| ||||||| ||||||||| || |||||||||||| | |||| || | |  | |||||||||||||| |||||    
T  22819270 tttcatatataagaaaagattctttttttacgttcattgaatagttaatgtatctgatttacaatgaagaccatatacattaattattcaatga 22819177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 325
Target Start/End: Original strand, 897025 - 897110
Alignment:
Q  239 atataagaaaggattccttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaatg 325  Q
    |||||||||| ||||| |||||||| | |||| | |||||||||||| | |||| |||||||||   ||||||||||||||| ||||    
T  897025 atataagaaaagattc-ttttttagatacatttaataattaatgtatttagtcttcattgtaaatgggatacattaattattcaatg 897110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 325
Target Start/End: Original strand, 40212295 - 40212381
Alignment:
Q  239 atataagaaaggattccttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaatg 325  Q
    ||||||||||  |||  |||| || ||| ||||| |||||||| ||||||||||| ||||||||  | |||||||||||||| ||||    
T  40212295 atataagaaaatattatttttctaagtttattgaataattaatatatctggtctatattgtaaaaaaaatacattaattattcaatg 40212381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 2e-31; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 235 - 320
Target Start/End: Original strand, 45361984 - 45362069
Alignment:
Q  235 tcaaatataagaaaggattccttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatt 320  Q
    |||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  45361984 tcaaatataagaaaagattcattttttaagttcattgagtaattaatgtatctggtctacattgtaaagcagatacattaattatt 45362069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 36750856 - 36750793
Alignment:
Q  257 tttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatt 320  Q
    ||||||| ||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||    
T  36750856 tttttagattcattgagtagttaatgtatctgatctacattgtaaagcagatacattaattatt 36750793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 318
Target Start/End: Complemental strand, 45362105 - 45362023
Alignment:
Q  235 tcaaatataagaaaggattccttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaatta 318  Q
    |||||||||||||| ||||| ||||||||||| ||||| ||||||||||||||| | |||| |||| |  ||||||||||||||    
T  45362105 tcaaatataagaaaagattc-ttttttaggttaattgaataattaatgtatctgctttacaatgtagaccagatacattaatta 45362023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 325
Target Start/End: Original strand, 39297729 - 39297780
Alignment:
Q  274 taattaatgtatctggtctacattgtaaagtagatacattaattatttaatg 325  Q
    ||||||||||||||||||| |||| |||| |||||||||||| |||| ||||    
T  39297729 taattaatgtatctggtcttcattttaaattagatacattaactattcaatg 39297780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 326
Target Start/End: Original strand, 38217489 - 38217558
Alignment:
Q  257 tttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaatga 326  Q
    |||||||||||||||| |||||||| ||| | | ||||| |||| |||| |||||| | |||||||||||    
T  38217489 tttttaggttcattgaataattaatatatttagactacagtgtagagtaaatacatcatttatttaatga 38217558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 293
Target Start/End: Complemental strand, 31836520 - 31836484
Alignment:
Q  257 tttttaggttcattgagtaattaatgtatctggtcta 293  Q
    |||||||||||||||| |||||||||||| |||||||    
T  31836520 tttttaggttcattgaataattaatgtatttggtcta 31836484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 315
Target Start/End: Original strand, 36750756 - 36750836
Alignment:
Q  235 tcaaatataagaaaggattccttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaa 315  Q
    |||||||||||||| |||||||||| ||| |   |||| ||||||||||||||| | |||| |||| |  |||||||||||    
T  36750756 tcaaatataagaaaagattccttttatagttcttttgaataattaatgtatctgctttacaatgtagatcagatacattaa 36750836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 293
Target Start/End: Original strand, 44518071 - 44518107
Alignment:
Q  257 tttttaggttcattgagtaattaatgtatctggtcta 293  Q
    ||||||| ||||||||||||||||||||||| |||||    
T  44518071 tttttagattcattgagtaattaatgtatcttgtcta 44518107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 297
Target Start/End: Complemental strand, 50626794 - 50626758
Alignment:
Q  261 taggttcattgagtaattaatgtatctggtctacatt 297  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  50626794 taggttcattgaataactaatgtatctggtctacatt 50626758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 4e-29; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 14547778 - 14547863
Alignment:
Q  241 ataagaaaggattccttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaatga 326  Q
    |||||||| ||||| |||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  14547778 ataagaaatgattctttttttaggttcattgagtagttaatctatctggtctacattgtaaagcagatacattaattatttaatga 14547863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 326
Target Start/End: Original strand, 30112375 - 30112441
Alignment:
Q  260 ttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaatga 326  Q
    ||||||||||||| |||||||||||| ||||||||||||| || ||||||||||||||||| |||||    
T  30112375 ttaggttcattgaataattaatgtatttggtctacattgttaaatagatacattaattattcaatga 30112441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 257 - 326
Target Start/End: Complemental strand, 27976835 - 27976766
Alignment:
Q  257 tttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaatga 326  Q
    ||||||| |||||||| |||||||||||||||||||||||| || |  |||| |||||||||||||||||    
T  27976835 tttttagattcattgaataattaatgtatctggtctacattatagaccagatgcattaattatttaatga 27976766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 257 - 326
Target Start/End: Complemental strand, 28034104 - 28034035
Alignment:
Q  257 tttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaatga 326  Q
    ||||||| |||||||| |||||||||||||||||||||||| || |  |||| |||||||||||||||||    
T  28034104 tttttagattcattgaataattaatgtatctggtctacattatagaccagatgcattaattatttaatga 28034035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 325
Target Start/End: Original strand, 325225 - 325311
Alignment:
Q  239 atataagaaaggattccttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaatg 325  Q
    ||||||||||  |||| |||||||| | |||| | |||||||||||||| |||| |||||||||  |||||||||||||||| ||||    
T  325225 atataagaaaatattctttttttagatacatttaataattaatgtatctagtcttcattgtaaacgagatacattaattattcaatg 325311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 27871049 - 27870979
Alignment:
Q  257 tttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaatgat 327  Q
    ||||||| |||||||| |||||||||||||||||||||||| || |  |||| | ||||||||||||||||    
T  27871049 tttttagattcattgaataattaatgtatctggtctacattatagaccagatgctttaattatttaatgat 27870979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 326
Target Start/End: Complemental strand, 41175318 - 41175231
Alignment:
Q  239 atataagaaaggattccttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaatga 326  Q
    |||||| ||| |||||| |||||||||||||| | |||||||||||||| |  | |||| |||| ||||||| ||||||||| |||||    
T  41175318 atataaaaaaagattccatttttaggttcattaattaattaatgtatctagcatgcattataaactagatacgttaattattcaatga 41175231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 326
Target Start/End: Original strand, 41175204 - 41175291
Alignment:
Q  239 atataagaaaggattccttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaatga 326  Q
    |||||||||| | |||||||||||| |||||||| ||||||| |||||| || || | || |   ||||||||||||||| |||||||    
T  41175204 atataagaaaagtttccttttttagattcattgaataattaacgtatctagtttataatgcatgctagatacattaattaattaatga 41175291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 326
Target Start/End: Original strand, 195631 - 195697
Alignment:
Q  260 ttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaatga 326  Q
    ||||||||||| | || ||||||||| | || |||||||||| | | ||||||||||||||||||||    
T  195631 ttaggttcatttaatagttaatgtatttagtttacattgtaatgcaaatacattaattatttaatga 195697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 326
Target Start/End: Original strand, 310468 - 310534
Alignment:
Q  260 ttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaatga 326  Q
    ||||||||||| | || ||||||||| | || |||||||||| | | ||||||||||||||||||||    
T  310468 ttaggttcatttaatagttaatgtatttagtttacattgtaatgcaaatacattaattatttaatga 310534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 325
Target Start/End: Complemental strand, 325322 - 325253
Alignment:
Q  256 ttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaatg 325  Q
    ||||||| || |||||| |||||||||||||| || |||| || | | ||||||||||||||||| ||||    
T  325322 ttttttaagtacattgaataattaatgtatctcgtttacaatgaagactagatacattaattattaaatg 325253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 326
Target Start/End: Original strand, 1364150 - 1364219
Alignment:
Q  257 tttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaatga 326  Q
    |||||| ||| ||||| |||||||||||| ||| ||||| |||||| || |||||||| ||||| |||||    
T  1364150 tttttaagtttattgaataattaatgtatttggactacaatgtaaactaaatacattatttattcaatga 1364219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 326
Target Start/End: Complemental strand, 5668233 - 5668181
Alignment:
Q  274 taattaatgtatctggtctacattgtaaagtagatacattaattatttaatga 326  Q
    |||||||||||||| ||||||||||||||    |||||| |||||||||||||    
T  5668233 taattaatgtatctagtctacattgtaaaacgaatacatcaattatttaatga 5668181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 302
Target Start/End: Complemental strand, 32910198 - 32910133
Alignment:
Q  235 tcaaatataagaaaggattccttttttaggttcattgagtaattaatgtatctggtctacattgtaaa 302  Q
    |||||||||| ||| ||||  ||||||||||| ||| | ||||||||||||||| |||||| ||||||    
T  32910198 tcaaatataacaaacgatt--ttttttaggttaattaaataattaatgtatctgatctacaatgtaaa 32910133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 293
Target Start/End: Complemental strand, 42123079 - 42123043
Alignment:
Q  257 tttttaggttcattgagtaattaatgtatctggtcta 293  Q
    ||||||| ||||||||||||||||||||||| |||||    
T  42123079 tttttagattcattgagtaattaatgtatcttgtcta 42123043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 6e-28; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 235 - 326
Target Start/End: Complemental strand, 50533461 - 50533370
Alignment:
Q  235 tcaaatataagaaaggattccttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaatga 326  Q
    ||||||||||||||  |||  |||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  50533461 tcaaatataagaaaatattatttttttaggttcattgagtagttaatgtatctggtctacattgtaaagcagatatattaattatttaatga 50533370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 256 - 326
Target Start/End: Complemental strand, 12766955 - 12766885
Alignment:
Q  256 ttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaatga 326  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12766955 ttttttaggttcattgaataattaatgtatctggtctacattgtaaagtagatacattaattattcaatga 12766885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 235 - 326
Target Start/End: Original strand, 54357904 - 54357994
Alignment:
Q  235 tcaaatataagaaaggattccttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaatga 326  Q
    ||||||||||||||  |||| |||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||| |||||    
T  54357904 tcaaatataagaaaatattc-ttttttaggttcattgagtagttaatgtatctggtctacattgtaaaacagatacattaattattaaatga 54357994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 239 - 320
Target Start/End: Complemental strand, 10555025 - 10554944
Alignment:
Q  239 atataagaaaggattccttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatt 320  Q
    ||||||||||  ||||||||| || ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  10555025 atataagaaaatattccttttgtaagttcattgaataattaatgtatctggtcttcattgtaaagtagatacattaattatt 10554944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 324
Target Start/End: Complemental strand, 39196004 - 39195917
Alignment:
Q  236 caaatataagaaaggattccttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaat 324  Q
    ||||||||||||| ||||  |||||||||| ||||||||| |||||||||||| |||||||||||||| ||||||||||| ||||||||    
T  39196004 caaatataagaaaagatta-ttttttaggtccattgagtagttaatgtatctgatctacattgtaaagcagatacattaactatttaat 39195917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 256 - 326
Target Start/End: Original strand, 22450170 - 22450240
Alignment:
Q  256 ttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaatga 326  Q
    ||||||||||||||| |||  |||||||||||||||||||||||||| || ||| ||||||||||||||||    
T  22450170 ttttttaggttcattaagttgttaatgtatctggtctacattgtaaaataaatatattaattatttaatga 22450240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 226 - 326
Target Start/End: Complemental strand, 20459159 - 20459059
Alignment:
Q  226 cttccagtttcaaatataagaaaggattccttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaatg 325  Q
    ||||| || ||||||||||||||  |||  | |||||| ||||||||||| ||||||||||||||||||||| ||||  | ||| |||||||||||||||    
T  20459159 cttccggtctcaaatataagaaaatatttttattttagattcattgagtagttaatgtatctggtctacattttaaaacatatatattaattatttaatg 20459060  T
Q  326 a 326  Q
    |    
T  20459059 a 20459059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 326
Target Start/End: Original strand, 6724909 - 6724971
Alignment:
Q  264 gttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaatga 326  Q
    |||| |||| ||||||||||||||||||||||||| |||  ||||| |||||||||| |||||    
T  6724909 gttcgttgaataattaatgtatctggtctacattgaaaaacagatatattaattattcaatga 6724971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 290
Target Start/End: Complemental strand, 10555467 - 10555416
Alignment:
Q  239 atataagaaaggattccttttttaggttcattgagtaattaatgtatctggt 290  Q
    ||||||||||  ||||||||| || ||||||||| |||||||||||||||||    
T  10555467 atataagaaaatattccttttgtaagttcattgaataattaatgtatctggt 10555416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 320
Target Start/End: Complemental strand, 6724982 - 6724917
Alignment:
Q  255 cttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatt 320  Q
    |||||||||||||||||| |||||||| |||||| | | || |||| |  ||||||||||||||||    
T  6724982 cttttttaggttcattgaataattaatatatctgtttttcaatgtagaccagatacattaattatt 6724917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Complemental strand, 45828529 - 45828492
Alignment:
Q  256 ttttttaggttcattgagtaattaatgtatctggtcta 293  Q
    |||||||| ||||||||||||||||||||| |||||||    
T  45828529 ttttttagattcattgagtaattaatgtatttggtcta 45828492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 312
Target Start/End: Original strand, 34320946 - 34321002
Alignment:
Q  256 ttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacat 312  Q
    ||||||||||||||||| |||| ||||||| ||| ||||| |||||| || ||||||    
T  34320946 ttttttaggttcattgaataatcaatgtatttggactacaatgtaaactaaatacat 34321002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 315
Target Start/End: Original strand, 50533339 - 50533419
Alignment:
Q  235 tcaaatataagaaaggattccttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaa 315  Q
    |||||||||||||| |||||  ||||||| |||||| | |||||||| |||||| | |||| |||| |  |||||||||||    
T  50533339 tcaaatataagaaaagattctctttttagattcattaaataattaatatatctgctttacaatgtagaccagatacattaa 50533419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 293
Target Start/End: Complemental strand, 52280976 - 52280940
Alignment:
Q  257 tttttaggttcattgagtaattaatgtatctggtcta 293  Q
    ||||||||||||||||||| ||||||||| |||||||    
T  52280976 tttttaggttcattgagtacttaatgtatttggtcta 52280940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 315
Target Start/End: Complemental strand, 54358025 - 54357945
Alignment:
Q  235 tcaaatataagaaaggattccttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaa 315  Q
    ||||||||||||||  |||   |||||||||||||| | ||||||||||||||| | |||| |||| |  |||||||||||    
T  54358025 tcaaatataagaaaaaattatctttttaggttcatttaataattaatgtatctgttttacaatgtagaccagatacattaa 54357945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 256 - 326
Target Start/End: Complemental strand, 12442348 - 12442278
Alignment:
Q  256 ttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaatga 326  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  12442348 ttttttaggttcattgagtagttaatgtatctggtctacattgtaaaacagatacattaattatttaatga 12442278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 326
Target Start/End: Original strand, 6761068 - 6761138
Alignment:
Q  256 ttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaatga 326  Q
    ||||||||||||||||| |||||||| ||| ||| ||||| |||||| || |||||||| ||||| |||||    
T  6761068 ttttttaggttcattgaataattaatatatttggactacaatgtaaactaaatacattatttattcaatga 6761138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 235 - 320
Target Start/End: Complemental strand, 26586293 - 26586208
Alignment:
Q  235 tcaaatataagaaaggattccttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatt 320  Q
    |||||||| |||||  |||| |||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||    
T  26586293 tcaaatattagaaaatattctttttttaggttcattgagtagttaatgtatctggcctacattgtaaaatagatacattaattatt 26586208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 256 - 324
Target Start/End: Complemental strand, 47681631 - 47681563
Alignment:
Q  256 ttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaat 324  Q
    |||||||| ||||||||||| ||||||||||||||| | ||||||||| ||||||||||||||||||||    
T  47681631 ttttttagattcattgagtagttaatgtatctggtcgatattgtaaagcagatacattaattatttaat 47681563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 320
Target Start/End: Complemental strand, 38363976 - 38363912
Alignment:
Q  256 ttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatt 320  Q
    ||||||| |||||||||||| ||||||||||| ||||||||| ||||| ||||||||||||||||    
T  38363976 ttttttatgttcattgagtagttaatgtatcttgtctacattataaagcagatacattaattatt 38363912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 326
Target Start/End: Original strand, 37002878 - 37002965
Alignment:
Q  239 atataagaaaggattccttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaatga 326  Q
    ||||||||||  |||| |||| |||||||||||| |||||||| ||| | |||||||||||||| || |||||||| |||||||||||    
T  37002878 atataagaaaatattctttttataggttcattgaataattaatatattttgtctacattgtaaaataaatacattatttatttaatga 37002965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 256 - 324
Target Start/End: Complemental strand, 30322826 - 30322758
Alignment:
Q  256 ttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaat 324  Q
    ||||||||||||||||| |||||||||||| || | |||| |||||| || ||||||||||||||||||    
T  30322826 ttttttaggttcattgaataattaatgtatatgttatacaatgtaaactatatacattaattatttaat 30322758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 326
Target Start/End: Original strand, 32404788 - 32404850
Alignment:
Q  264 gttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaatga 326  Q
    ||||||||| | |||||| ||||| |||||||||||||| || |||||||||||||| |||||    
T  32404788 gttcattgaatgattaatatatctagtctacattgtaaaataaatacattaattattcaatga 32404850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 324
Target Start/End: Complemental strand, 21079912 - 21079824
Alignment:
Q  235 tcaaatataagaaaggattccttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaat 324  Q
    ||||||||||||||  |||| |||||||||||||||||  ||||||||||| || ||| |||||||||  ||||| | | ||||||||||    
T  21079912 tcaaatataagaaaatattc-ttttttaggttcattgaacaattaatgtatttgatcttcattgtaaatcagatagaatcattatttaat 21079824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 28838165 - 28838214
Alignment:
Q  276 attaatgtatctggtctacattgtaaagtagatacattaattatttaatg 325  Q
    ||||||||||||||||| |||||||||  |||||||||||||||| ||||    
T  28838165 attaatgtatctggtcttcattgtaaacgagatacattaattattcaatg 28838214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 324
Target Start/End: Complemental strand, 30059839 - 30059750
Alignment:
Q  235 tcaaatataagaaaggattccttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaat 324  Q
    ||||||||| |||| ||||| ||| ||| ||||||||| |||| || ||  ||||||| |||| ||||  ||||||||||||||||||||    
T  30059839 tcaaatatatgaaaagattcttttgttaagttcattgaataatgaacgttcctggtcttcattataaatcagatacattaattatttaat 30059750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 326
Target Start/End: Original strand, 5250776 - 5250846
Alignment:
Q  256 ttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaatga 326  Q
    |||||||||||||||||||||||||||||| | ||||| ||| ||    ||||||||||| |||| |||||    
T  5250776 ttttttaggttcattgagtaattaatgtatatagtctatattataggtcagatacattaactattcaatga 5250846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 326
Target Start/End: Original strand, 35436256 - 35436326
Alignment:
Q  256 ttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaatga 326  Q
    ||||||||||||||||| ||| | |||||||||||| | ||| || | ||||||||| ||||||| |||||    
T  35436256 ttttttaggttcattgaataacttatgtatctggtcaatattatatactagatacatcaattattcaatga 35436326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 326
Target Start/End: Complemental strand, 37489883 - 37489813
Alignment:
Q  256 ttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaatga 326  Q
    |||||||| || ||||| ||||||||||||||| | |||| ||| || |||||| |||||||||| |||||    
T  37489883 ttttttagattgattgaataattaatgtatctgttttacaatgtgaactagatatattaattattcaatga 37489813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 288
Target Start/End: Original strand, 47681530 - 47681583
Alignment:
Q  235 tcaaatataagaaaggattccttttttaggttcattgagtaattaatgtatctg 288  Q
    |||||||||||||| |||||  |||||||||| ||| | |||||||||||||||    
T  47681530 tcaaatataagaaaagattctctttttaggtttattaaataattaatgtatctg 47681583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000003; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 326
Target Start/End: Complemental strand, 6686930 - 6686859
Alignment:
Q  255 cttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaatga 326  Q
    |||||||||||||||||| |||||||||||| ||| ||||| |||||| || |||||| | ||||| |||||    
T  6686930 cttttttaggttcattgaataattaatgtatttggactacaatgtaaactaaatacatcatttattcaatga 6686859  T

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Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 320
Target Start/End: Complemental strand, 2284890 - 2284826
Alignment:
Q  256 ttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatt 320  Q
    ||||||||||| ||| | ||||||||||||||| |||| ||| ||||  ||||||||||||||||    
T  2284890 ttttttaggtttattaaataattaatgtatctgatctatattataaatcagatacattaattatt 2284826  T

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Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 29938724 - 29938661
Alignment:
Q  257 tttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatt 320  Q
    ||||||| | |||||| |||||||||||||| ||||  |||||| | |||||||||||||||||    
T  29938724 tttttagatacattgaataattaatgtatctagtctttattgtatactagatacattaattatt 29938661  T

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Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 293
Target Start/End: Complemental strand, 2230462 - 2230426
Alignment:
Q  257 tttttaggttcattgagtaattaatgtatctggtcta 293  Q
    ||||||| ||||||||||||||||||||||| |||||    
T  2230462 tttttagattcattgagtaattaatgtatcttgtcta 2230426  T

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Target: chr2 (Bit Score: 35; Significance: 0.0000000001; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 325
Target Start/End: Original strand, 25903701 - 25903787
Alignment:
Q  239 atataagaaaggattccttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaatg 325  Q
    |||||||||| |||||  || |||| | |||||| |||||||||||||| || |||| || | ||||||||||||||||||| ||||    
T  25903701 atataagaaaagattctcttattagatacattgaataattaatgtatctcgtttacaatgaagagtagatacattaattattaaatg 25903787  T

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Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 325
Target Start/End: Complemental strand, 12032745 - 12032676
Alignment:
Q  256 ttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaatg 325  Q
    |||||||| | |||| | ||||| ||||||||||||| ||| |||||  |||||||||||||||||||||    
T  12032745 ttttttagatacatttaataattgatgtatctggtcttcatcgtaaacaagatacattaattatttaatg 12032676  T

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Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 326
Target Start/End: Complemental strand, 36452520 - 36452433
Alignment:
Q  239 atataagaaaggattccttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaatga 326  Q
    ||||| |||| ||||  |||| ||| |||||||| ||||| ||||||||| |||| ||||| ||  |||||||||| |||||||||||    
T  36452520 atatatgaaaagattagttttctagattcattgaataattgatgtatctgatctatattgttaaccagatacattacttatttaatga 36452433  T

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Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 325
Target Start/End: Complemental strand, 25903798 - 25903729
Alignment:
Q  256 ttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatttaatg 325  Q
    |||||||| | |||| | ||||||||||||||  ||| |||||||||  |||||||||||||||| ||||    
T  25903798 ttttttagatacatttaataattaatgtatctactcttcattgtaaacgagatacattaattattcaatg 25903729  T

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Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 320
Target Start/End: Complemental strand, 34009561 - 34009497
Alignment:
Q  256 ttttttaggttcattgagtaattaatgtatctggtctacattgtaaagtagatacattaattatt 320  Q
    |||||||| || ||| | ||||||||||||||| | ||||||||||| | |||| ||||||||||    
T  34009561 ttttttagatttattaaataattaatgtatctgatgtacattgtaaaattgatatattaattatt 34009497  T

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