View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17385_high_38 (Length: 306)
Name: NF17385_high_38
Description: NF17385
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17385_high_38 |
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Alignment Details
Target: chr1 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 226
Target Start/End: Original strand, 39771824 - 39771903
Alignment:
| Q |
142 |
atatatattttaatattacatatattcatcgctctaaattcatatattcaacnnnnnnnnngtgaggatgtattcaaatttgtac |
226 |
Q |
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| T |
39771824 |
atatatattttaatattacat----tcatcgctctaaattcatatattcaac-ttttttttgtgaggatgtattcaaatttgtac |
39771903 |
T |
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