View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17385_high_57 (Length: 238)

Name: NF17385_high_57
Description: NF17385
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17385_high_57
NF17385_high_57
[»] chr3 (38 HSPs)
chr3 (22-219)||(12771095-12771292)
chr3 (15-219)||(8145248-8145448)
chr3 (15-178)||(8765674-8765837)
chr3 (15-178)||(8770564-8770727)
chr3 (21-219)||(19912586-19912786)
chr3 (15-159)||(34276390-34276534)
chr3 (43-171)||(52935474-52935602)
chr3 (15-219)||(8881299-8881498)
chr3 (52-178)||(31283837-31283963)
chr3 (84-220)||(16223550-16223686)
chr3 (15-105)||(12517290-12517380)
chr3 (19-178)||(13938779-13938939)
chr3 (15-105)||(18457118-18457208)
chr3 (43-178)||(5521551-5521693)
chr3 (15-101)||(8115305-8115391)
chr3 (15-105)||(16242201-16242290)
chr3 (15-105)||(25850955-25851045)
chr3 (15-115)||(1096758-1096857)
chr3 (52-113)||(819845-819906)
chr3 (34-103)||(2508728-2508797)
chr3 (43-103)||(22470411-22470471)
chr3 (53-154)||(13906541-13906642)
chr3 (43-103)||(22247025-22247084)
chr3 (59-114)||(7805786-7805841)
chr3 (26-105)||(12372339-12372418)
chr3 (44-103)||(18535799-18535858)
chr3 (131-178)||(27363627-27363674)
chr3 (15-61)||(20431472-20431518)
chr3 (43-105)||(20891652-20891714)
chr3 (21-105)||(2166042-2166125)
chr3 (52-107)||(22450486-22450541)
chr3 (43-105)||(3114716-3114778)
chr3 (126-164)||(19167303-19167341)
chr3 (64-101)||(5270817-5270854)
chr3 (43-80)||(19387891-19387928)
chr3 (52-105)||(20886905-20886958)
chr3 (61-105)||(15669345-15669389)
chr3 (131-175)||(17135175-17135219)
[»] chr8 (39 HSPs)
chr8 (15-178)||(15176367-15176529)
chr8 (15-178)||(17510904-17511067)
chr8 (15-175)||(29765328-29765489)
chr8 (58-178)||(25227302-25227422)
chr8 (15-171)||(18446800-18446956)
chr8 (15-105)||(24583178-24583268)
chr8 (70-219)||(18570547-18570693)
chr8 (19-178)||(17100141-17100299)
chr8 (15-105)||(20400334-20400424)
chr8 (15-99)||(13313284-13313368)
chr8 (15-103)||(19704986-19705074)
chr8 (69-172)||(25180660-25180764)
chr8 (15-178)||(26829401-26829563)
chr8 (15-105)||(28621604-28621694)
chr8 (26-173)||(21316794-21316941)
chr8 (15-98)||(24090892-24090975)
chr8 (15-105)||(23867836-23867926)
chr8 (73-162)||(24750883-24750972)
chr8 (59-159)||(13833556-13833656)
chr8 (16-92)||(24520022-24520098)
chr8 (15-105)||(29380967-29381058)
chr8 (16-105)||(24389757-24389846)
chr8 (15-103)||(24380362-24380450)
chr8 (31-98)||(34499244-34499311)
chr8 (15-105)||(19265822-19265912)
chr8 (52-178)||(24908941-24909067)
chr8 (52-178)||(24911162-24911288)
chr8 (60-103)||(5151964-5152007)
chr8 (60-103)||(17650006-17650049)
chr8 (53-103)||(15557405-15557455)
chr8 (53-103)||(21695422-21695472)
chr8 (43-105)||(30117665-30117727)
chr8 (51-108)||(24381990-24382047)
chr8 (43-102)||(22501861-22501920)
chr8 (43-105)||(14271869-14271931)
chr8 (64-102)||(18836841-18836879)
chr8 (15-105)||(25481512-25481602)
chr8 (97-142)||(17970582-17970627)
chr8 (52-101)||(28858873-28858921)
[»] chr4 (30 HSPs)
chr4 (21-219)||(11782498-11782692)
chr4 (18-105)||(15166471-15166558)
chr4 (15-219)||(25096300-25096496)
chr4 (15-103)||(12616714-12616802)
chr4 (74-219)||(4617153-4617293)
chr4 (15-103)||(17335364-17335452)
chr4 (15-105)||(22171748-22171838)
chr4 (16-97)||(17711307-17711388)
chr4 (15-99)||(7583792-7583876)
chr4 (15-115)||(17218529-17218628)
chr4 (31-101)||(10106311-10106381)
chr4 (31-152)||(9054021-9054142)
chr4 (15-103)||(18750824-18750912)
chr4 (70-172)||(19919077-19919181)
chr4 (41-103)||(8968080-8968142)
chr4 (31-105)||(9536762-9536836)
chr4 (15-105)||(19556548-19556636)
chr4 (43-105)||(25025134-25025196)
chr4 (88-219)||(17108769-17108894)
chr4 (16-82)||(16928925-16928991)
chr4 (74-154)||(22346138-22346218)
chr4 (52-115)||(17434471-17434534)
chr4 (43-105)||(9849714-9849776)
chr4 (52-102)||(12836080-12836130)
chr4 (52-102)||(13588745-13588795)
chr4 (15-68)||(17108718-17108771)
chr4 (15-105)||(11252136-11252226)
chr4 (44-102)||(22350250-22350308)
chr4 (16-108)||(9263354-9263446)
chr4 (43-99)||(20828152-20828208)
[»] chr7 (48 HSPs)
chr7 (15-219)||(19201458-19201658)
chr7 (19-178)||(39270207-39270365)
chr7 (46-178)||(6039231-6039363)
chr7 (15-219)||(13287608-13287807)
chr7 (31-178)||(15170698-15170845)
chr7 (42-178)||(19201256-19201392)
chr7 (15-102)||(11804698-11804785)
chr7 (15-102)||(18986754-18986841)
chr7 (15-102)||(19001382-19001469)
chr7 (70-178)||(2506754-2506862)
chr7 (21-105)||(26249082-26249166)
chr7 (15-178)||(144976-145136)
chr7 (43-178)||(19154846-19154984)
chr7 (43-178)||(20754245-20754383)
chr7 (15-103)||(3585531-3585619)
chr7 (70-178)||(13252641-13252749)
chr7 (18-102)||(4450674-4450758)
chr7 (15-103)||(5236875-5236963)
chr7 (15-103)||(8977479-8977567)
chr7 (15-102)||(8052439-8052525)
chr7 (15-102)||(10611713-10611800)
chr7 (15-103)||(9078890-9078979)
chr7 (15-103)||(13280759-13280847)
chr7 (84-178)||(20577560-20577654)
chr7 (15-108)||(6046527-6046620)
chr7 (15-103)||(2565906-2565994)
chr7 (15-103)||(23173694-23173782)
chr7 (43-103)||(23897268-23897328)
chr7 (15-102)||(3173710-3173797)
chr7 (15-105)||(9767785-9767875)
chr7 (59-103)||(10332448-10332492)
chr7 (44-107)||(3736365-3736428)
chr7 (15-102)||(10418557-10418644)
chr7 (15-105)||(2927874-2927964)
chr7 (52-102)||(9288947-9288997)
chr7 (52-102)||(9298739-9298789)
chr7 (52-102)||(9722478-9722528)
chr7 (43-105)||(14195776-14195838)
chr7 (60-105)||(10414286-10414331)
chr7 (59-103)||(9918211-9918255)
chr7 (59-103)||(9926123-9926167)
chr7 (71-159)||(24194472-24194560)
chr7 (43-105)||(3692767-3692829)
chr7 (64-150)||(12865259-12865345)
chr7 (70-104)||(16055264-16055298)
chr7 (59-101)||(18468350-18468392)
chr7 (59-97)||(20176137-20176175)
chr7 (59-103)||(1810948-1810992)
[»] chr5 (36 HSPs)
chr5 (15-176)||(20860339-20860500)
chr5 (16-219)||(19053102-19053301)
chr5 (17-163)||(24320470-24320617)
chr5 (31-176)||(34488873-34489018)
chr5 (43-178)||(31600008-31600144)
chr5 (18-175)||(20548390-20548547)
chr5 (15-108)||(23387551-23387644)
chr5 (15-100)||(19003777-19003862)
chr5 (52-160)||(25572431-25572538)
chr5 (15-105)||(29987956-29988047)
chr5 (21-105)||(25400745-25400829)
chr5 (15-103)||(34132086-34132174)
chr5 (15-102)||(28666492-28666579)
chr5 (15-105)||(24162018-24162108)
chr5 (15-100)||(26069249-26069334)
chr5 (15-160)||(26117437-26117581)
chr5 (15-105)||(23338892-23338981)
chr5 (64-154)||(32415788-32415878)
chr5 (32-105)||(23214832-23214905)
chr5 (31-105)||(24658306-24658381)
chr5 (15-102)||(25920831-25920918)
chr5 (15-101)||(17469569-17469655)
chr5 (15-105)||(22797427-22797517)
chr5 (43-108)||(18832250-18832315)
chr5 (85-178)||(24262118-24262211)
chr5 (43-103)||(23110205-23110265)
chr5 (43-105)||(18939548-18939610)
chr5 (52-105)||(23266853-23266906)
chr5 (52-105)||(26348479-26348532)
chr5 (53-102)||(28254929-28254978)
chr5 (51-103)||(15691304-15691356)
chr5 (15-103)||(24142407-24142495)
chr5 (52-108)||(24263754-24263810)
chr5 (58-105)||(19761588-19761635)
chr5 (88-150)||(20593246-20593308)
chr5 (52-102)||(26148289-26148339)
[»] chr2 (28 HSPs)
chr2 (15-175)||(28918188-28918348)
chr2 (15-164)||(27907470-27907619)
chr2 (15-147)||(25886156-25886288)
chr2 (15-220)||(25532236-25532437)
chr2 (43-178)||(23009978-23010112)
chr2 (16-103)||(26313179-26313266)
chr2 (15-165)||(20379286-20379436)
chr2 (72-178)||(25922662-25922768)
chr2 (15-112)||(24086306-24086403)
chr2 (15-103)||(17350978-17351066)
chr2 (43-103)||(17891759-17891819)
chr2 (15-105)||(22569054-22569144)
chr2 (15-100)||(18758301-18758386)
chr2 (53-105)||(16157091-16157143)
chr2 (43-105)||(16257888-16257950)
chr2 (31-105)||(21905742-21905816)
chr2 (43-101)||(35680111-35680169)
chr2 (58-103)||(26651646-26651691)
chr2 (15-103)||(25196611-25196699)
chr2 (15-105)||(29144634-29144725)
chr2 (15-105)||(34574513-34574604)
chr2 (22-103)||(27540274-27540355)
chr2 (52-164)||(32087085-32087197)
chr2 (15-78)||(28930274-28930337)
chr2 (53-103)||(29892228-29892278)
chr2 (72-105)||(28766909-28766942)
chr2 (52-105)||(32137919-32137972)
chr2 (110-150)||(31449851-31449891)
[»] scaffold0056 (1 HSPs)
scaffold0056 (15-219)||(23036-23239)
[»] chr6 (43 HSPs)
chr6 (15-178)||(21845662-21845826)
chr6 (51-178)||(26820896-26821023)
chr6 (15-108)||(24480024-24480117)
chr6 (15-105)||(14641632-14641722)
chr6 (17-115)||(17384025-17384123)
chr6 (15-105)||(24469798-24469888)
chr6 (15-103)||(17822032-17822121)
chr6 (15-87)||(19577562-19577634)
chr6 (15-103)||(22404263-22404351)
chr6 (84-178)||(22569923-22570018)
chr6 (16-102)||(1636635-1636720)
chr6 (31-92)||(9848179-9848240)
chr6 (18-106)||(22564555-22564643)
chr6 (15-102)||(9519732-9519819)
chr6 (31-102)||(9841035-9841106)
chr6 (15-105)||(21760414-21760504)
chr6 (72-145)||(15551112-15551185)
chr6 (16-101)||(22845862-22845947)
chr6 (52-160)||(19721798-19721905)
chr6 (15-105)||(14078037-14078128)
chr6 (15-102)||(14723684-14723771)
chr6 (31-105)||(14076412-14076486)
chr6 (53-103)||(27961252-27961302)
chr6 (15-108)||(11136918-11137011)
chr6 (15-92)||(17847780-17847857)
chr6 (43-103)||(21687138-21687198)
chr6 (31-102)||(4340680-4340751)
chr6 (15-78)||(19594010-19594073)
chr6 (42-108)||(21036957-21037023)
chr6 (62-103)||(9338987-9339028)
chr6 (52-105)||(14727171-14727224)
chr6 (15-92)||(21152511-21152588)
chr6 (31-67)||(8066668-8066704)
chr6 (61-105)||(23087114-23087158)
chr6 (91-149)||(8322868-8322926)
chr6 (17-67)||(17379495-17379545)
chr6 (31-105)||(19246292-19246366)
chr6 (63-112)||(3358190-3358239)
chr6 (43-104)||(15600422-15600483)
chr6 (61-159)||(16167860-16167954)
chr6 (52-105)||(30356300-30356353)
chr6 (15-103)||(2588296-2588384)
chr6 (69-105)||(31878855-31878891)
[»] chr1 (43 HSPs)
chr1 (15-172)||(18827396-18827553)
chr1 (21-178)||(25402369-25402526)
chr1 (15-103)||(15542317-15542405)
chr1 (16-113)||(12210266-12210363)
chr1 (15-105)||(729136-729226)
chr1 (15-105)||(21663097-21663187)
chr1 (31-176)||(16114816-16114961)
chr1 (70-178)||(22624810-22624918)
chr1 (15-97)||(16180718-16180799)
chr1 (15-105)||(21450767-21450857)
chr1 (30-100)||(27973318-27973388)
chr1 (15-103)||(18527505-18527593)
chr1 (16-103)||(28009747-28009834)
chr1 (64-148)||(21536870-21536954)
chr1 (39-105)||(14782554-14782620)
chr1 (15-100)||(22507393-22507479)
chr1 (15-105)||(26611338-26611428)
chr1 (15-103)||(22624616-22624704)
chr1 (15-114)||(18734583-18734682)
chr1 (31-114)||(26647355-26647438)
chr1 (53-103)||(7221554-7221604)
chr1 (31-97)||(15158803-15158869)
chr1 (15-105)||(18832215-18832305)
chr1 (15-105)||(22426522-22426612)
chr1 (15-103)||(16817117-16817205)
chr1 (43-103)||(24901237-24901297)
chr1 (31-103)||(27116232-27116304)
chr1 (15-102)||(16363623-16363710)
chr1 (64-103)||(27912113-27912152)
chr1 (44-103)||(33192381-33192440)
chr1 (15-67)||(9403634-9403686)
chr1 (15-91)||(12011205-12011281)
chr1 (15-103)||(21333080-21333168)
chr1 (43-103)||(25959468-25959528)
chr1 (62-102)||(26581620-26581660)
chr1 (63-102)||(44797166-44797205)
chr1 (53-103)||(14235293-14235343)
chr1 (65-103)||(24464664-24464702)
chr1 (43-112)||(22626154-22626223)
chr1 (70-102)||(9403679-9403711)
chr1 (52-108)||(15571692-15571748)
chr1 (52-92)||(17445103-17445143)
chr1 (110-154)||(31260586-31260630)
[»] scaffold0043 (1 HSPs)
scaffold0043 (52-178)||(88370-88496)
[»] scaffold0871 (1 HSPs)
scaffold0871 (62-219)||(4005-4157)
[»] scaffold0016 (1 HSPs)
scaffold0016 (15-108)||(4824-4917)
[»] scaffold0072 (1 HSPs)
scaffold0072 (53-160)||(38329-38436)
[»] scaffold0111 (1 HSPs)
scaffold0111 (15-102)||(21440-21527)
[»] scaffold0451 (1 HSPs)
scaffold0451 (15-105)||(5730-5820)
[»] scaffold0019 (2 HSPs)
scaffold0019 (15-103)||(182520-182608)
scaffold0019 (52-92)||(35215-35255)
[»] scaffold0014 (1 HSPs)
scaffold0014 (43-105)||(192150-192212)
[»] scaffold0002 (2 HSPs)
scaffold0002 (15-81)||(95624-95690)
scaffold0002 (64-101)||(369261-369298)
[»] scaffold0555 (1 HSPs)
scaffold0555 (23-100)||(6461-6538)
[»] scaffold0258 (1 HSPs)
scaffold0258 (15-103)||(20261-20349)
[»] scaffold0115 (1 HSPs)
scaffold0115 (44-100)||(36143-36199)
[»] scaffold0032 (1 HSPs)
scaffold0032 (16-100)||(92840-92924)
[»] scaffold0386 (1 HSPs)
scaffold0386 (44-103)||(4881-4940)
[»] scaffold0024 (1 HSPs)
scaffold0024 (15-92)||(41339-41416)
[»] scaffold0008 (1 HSPs)
scaffold0008 (88-156)||(265943-266011)


Alignment Details
Target: chr3 (Bit Score: 126; Significance: 4e-65; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 22 - 219
Target Start/End: Complemental strand, 12771292 - 12771095
Alignment:
Q  22 aatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccag 121  Q
    |||||||| |||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||  |     
T  12771292 aatcgttctaatactcatcatttttgctgctaaaatatactgaaaatgactgaaaaacatgctaagaataacgtaagatgacctatcgtcacaacctgaa 12771193  T
Q  122 acttaaatggttgcttgtcctcaagtaacgaaataaaaacataaattattctttgcannnnnnnncttcaagaaaaacatacctttccgggagttgtg 219  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||        ||||| ||||||||||| |||| ||||||||||    
T  12771192 acttaattggttgcttgtcctcaagtaacgaaataaaaacataaattattctttgcattttttttcttcaggaaaaacatacatttctgggagttgtg 12771095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 8145248 - 8145448
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcaca 114  Q
    |||||||||| |||  ||||||| || ||||||||||||||| ||||||||| ||| ||||||||||| |||||||||||||||||||||| ||  ||||    
T  8145248 cataggcaattgttttaatactcctcatttttgctgctaaaacctactgaaattgattgaaaaacatgctaagaataatgtaagatgacctgtcagcaca 8145347  T
Q  115 accccagacttaaatggttgcttgtcctcaagtaacgaaataaaaacataaattattctttgcannnnnnnncttcaagaaaaacatacctttccgggag 214  Q
    |||||| |||||||| |||||||||||||||||||| |||||||||||||  ||||||||||||         ||| || ||||||||||||||||||||    
T  8145348 accccaaacttaaattgttgcttgtcctcaagtaactaaataaaaacatattttattctttgcattttt----ttccaggaaaacatacctttccgggag 8145443  T
Q  215 ttgtg 219  Q
    |||||    
T  8145444 ttgtg 8145448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 15 - 178
Target Start/End: Original strand, 8765674 - 8765837
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcaca 114  Q
    |||||| |||||||| ||||||| || ||||||| ||||||| ||| ||||||||||||||||||||| ||||||||| ||| ||||| ||||| |||||    
T  8765674 cataggaaatcgttctaatactcctcttttttgcagctaaaacctattgaaaatgactgaaaaacatgctaagaataacgtaggatgatctatcatcaca 8765773  T
Q  115 accccagacttaaatggttgcttgtcctcaagtaacgaaataaaaacataaattattctttgca 178  Q
    |||||| ||||||| ||||||||||||| ||||||||||| |||||||||  ||||||||||||    
T  8765774 accccaaacttaaacggttgcttgtcctgaagtaacgaaagaaaaacatattttattctttgca 8765837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 15 - 178
Target Start/End: Original strand, 8770564 - 8770727
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcaca 114  Q
    |||||| |||||||| ||||||| || ||||||| ||||||| ||| ||||||||||||||||||||| ||||||||| ||| ||||| ||||| |||||    
T  8770564 cataggaaatcgttctaatactcctcttttttgcagctaaaacctattgaaaatgactgaaaaacatgctaagaataacgtaggatgatctatcatcaca 8770663  T
Q  115 accccagacttaaatggttgcttgtcctcaagtaacgaaataaaaacataaattattctttgca 178  Q
    |||||| ||||||| ||||||||||||| ||||||||||| |||||||||  ||||||||||||    
T  8770664 accccaaacttaaacggttgcttgtcctgaagtaacgaaagaaaaacatattttattctttgca 8770727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 21 - 219
Target Start/End: Original strand, 19912586 - 19912786
Alignment:
Q  21 caatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaacccca 120  Q
    ||||||||| ||||||| || ||||||||||||||| ||||||||||||||||||||| ||| ||||||||| |||||||||||| || ||| |||||||    
T  19912586 caatcgttctaatactcctcttttttgctgctaaaacctactgaaaatgactgaaaaatatgctaagaataacgtaagatgacctgtcatcaaaacccca 19912685  T
Q  121 gacttaaatggttgcttgtcctcaagtaacgaaataaaaacataaattattctttgc--annnnnnnncttcaagaaaaacatacctttccgggagttgt 218  Q
     |||||||  ||||||| |||||||||||||||| |||||||||  |||||||||||           ||||| ||||||||||||||||||||||||||    
T  19912686 aacttaaactgttgcttatcctcaagtaacgaaagaaaaacatattttattctttgctttttttttttcttcaggaaaaacatacctttccgggagttgt 19912785  T
Q  219 g 219  Q
    |    
T  19912786 g 19912786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 15 - 159
Target Start/End: Complemental strand, 34276534 - 34276390
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcaca 114  Q
    ||||||||||||||  ||||||| |||||||||||||||||| ||||||||||||||||||||| ||| ||||||||| |||| ||||||| || |||||    
T  34276534 cataggcaatcgttataatactcctcctttttgctgctaaaacctactgaaaatgactgaaaaatatgctaagaataacgtaaaatgacctgtcatcaca 34276435  T
Q  115 accccagacttaaatggttgcttgtcctcaagtaacgaaataaaa 159  Q
     || ||  ||||||| |||||||||||||||||||||||| ||||    
T  34276434 gcctcaagcttaaattgttgcttgtcctcaagtaacgaaagaaaa 34276390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 43 - 171
Target Start/End: Complemental strand, 52935602 - 52935474
Alignment:
Q  43 ttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcct 142  Q
    |||||||| ||||| ||||||||||||| ||||||||||| ||||||||| ||||||||||||||| ||||||||||| | |||||| |||| |||||||    
T  52935602 ttttgctggtaaaacctactgaaaatgattgaaaaacatgctaagaataacgtaagatgacctatcatcacaaccccaaatttaaattgttgattgtcct 52935503  T
Q  143 caagtaacgaaataaaaacataaattatt 171  Q
    |||||||||||| ||||| ||||||||||    
T  52935502 caagtaacgaaagaaaaatataaattatt 52935474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 8881498 - 8881299
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcaca 114  Q
    ||||||||||||||| ||||||| ||||||||| |||||   |||||| |||   |||||||  |||| ||||||||| |||||||||| |||| |||||    
T  8881498 cataggcaatcgttctaatactcctcctttttgttgctattttctactaaaataaactgaaag-catgctaagaataacgtaagatgacatatcatcaca 8881400  T
Q  115 accccagacttaaatggttgcttgtcctcaagtaacgaaataaaaacataaattattctttgcannnnnnnncttcaagaaaaacatacctttccgggag 214  Q
    |||||| ||||| || ||| |||||||||||||||||||| |||||||||| ||||||||||||         |||||||||| ||||| ||||||||||    
T  8881399 accccaaacttagattgtttcttgtcctcaagtaacgaaagaaaaacataatttattctttgcattttt----ttcaagaaaagcatacttttccgggag 8881304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 52 - 178
Target Start/End: Complemental strand, 31283963 - 31283837
Alignment:
Q  52 taaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcctcaagtaacg 151  Q
    ||||| ||||| ||||||| ||||||||||| ||||||||| || ||||||||| || ||||||||||| |||||||   ||||||||||||||||||||    
T  31283963 taaaacctacttaaaatgattgaaaaacatgataagaataacgttagatgacctgtcatcacaaccccaaacttaaactattgcttgtcctcaagtaacg 31283864  T
Q  152 aaataaaaacataaattattctttgca 178  Q
    ||| |||||||||  ||||| ||||||    
T  31283863 aaagaaaaacatattttattatttgca 31283837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 16223550 - 16223686
Alignment:
Q  84 taagaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcctcaagtaacgaaataaaaacataaattattctttgcannnnn 183  Q
    |||||| || |||||||||  | || ||||||||||| |||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||         
T  16223550 taagaaaaacgtaagatgagatgtcatcacaaccccaaacttaaattgttgcttgtcctcaagtaacgaaagaaaaacataagttattctttgcattttt 16223649  T
Q  184 nnncttcaagaaaaacatacctttccgggagttgtgt 220  Q
       ||||||||||||||||||||| | ||| ||||||    
T  16223650 tttcttcaagaaaaacataccttttcaggaattgtgt 16223686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 15 - 105
Target Start/End: Original strand, 12517290 - 12517380
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    ||||||||||| ||| ||||||| ||||||||||| |||||| ||||||||||||||||||||| ||| ||||||||| ||||||||||||    
T  12517290 cataggcaatcattctaatactcctcctttttgctactaaaacctactgaaaatgactgaaaaagatgctaagaataacgtaagatgacct 12517380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 178
Target Start/End: Complemental strand, 13938939 - 13938779
Alignment:
Q  19 ggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccc 118  Q
    ||||||||||| ||||||| ||||||||| |||||||| ||||||||| ||  | || |||||| ||||||||| |||| ||||||| || |||||||||    
T  13938939 ggcaatcgttctaatactcctcctttttggtgctaaaacctactgaaattgctttaacaacatgctaagaataacgtaaaatgacctgtcatcacaaccc 13938840  T
Q  119 cagacttaaatggttgcttgtcctcaagtaac-gaaataaaaacataaattattctttgca 178  Q
    || |||||||  |||| ||||||| || ||||  ||| |||||||||  ||||||||||||    
T  13938839 caaacttaaactgttgtttgtcctgaaataacaaaaaaaaaaacatattttattctttgca 13938779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 18457208 - 18457118
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    |||||||||| |||| ||||||| |||||||||||||||||| ||||||||||| |||||| |||||  ||||||||  ||||||||||||    
T  18457208 cataggcaattgttctaatactcctcctttttgctgctaaaacctactgaaaataactgaataacatcctaagaatagcgtaagatgacct 18457118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 178
Target Start/End: Original strand, 5521551 - 5521693
Alignment:
Q  43 ttttgctgctaaaatctactgaaaatgactgaaaaacatgttaa------gaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgct 136  Q
    |||||||| ||||| ||| ||||||||||||||||||||| |||      |||||| |||||||||||| |  || |||||||| ||||| |   |||||    
T  5521551 ttttgctggtaaaacctattgaaaatgactgaaaaacatgctaatgctaagaataacgtaagatgacctgtaatcgcaaccccaaacttataccattgct 5521650  T
Q  137 tgtcctcaagtaacgaaa-taaaaacataaattattctttgca 178  Q
    ||||||||||||||||||  |||||||||| ||||||||||||    
T  5521651 tgtcctcaagtaacgaaagaaaaaacataagttattctttgca 5521693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 8115391 - 8115305
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatg 101  Q
    ||||||||||||||| ||||||| ||||||||||| |||||| ||||| ||||| |||| |||||||| ||| ||||| ||||||||    
T  8115391 cataggcaatcgttctaatactcctcctttttgctactaaaacctactcaaaataactggaaaacatgctaaaaataacgtaagatg 8115305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 16242290 - 16242201
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    ||||||||||||||| ||||||| | |||||| ||||||||| ||||| ||||||| ||||||| ||| ||||||||| ||||||||||||    
T  16242290 cataggcaatcgttctaatactccttcttttttctgctaaaa-ctactaaaaatgagtgaaaaatatgctaagaataacgtaagatgacct 16242201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 25851045 - 25850955
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    ||||||||||||||  ||||||| |||||| ||||||||||  ||||| ||||| ||||||||||||| |||||||||  |||||||||||    
T  25851045 cataggcaatcgttttaatactcctcctttctgctgctaaatcctactaaaaataactgaaaaacatgctaagaataacataagatgacct 25850955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 115
Target Start/End: Complemental strand, 1096857 - 1096758
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcaca 114  Q
    ||||||||||||||| | || || ||||||||||||||||||   ||||||||||||| |||||||||  |||||||| |||||||||||| || |||||    
T  1096857 cataggcaatcgttctagtaatcctcctttttgctgctaaaactgactgaaaatgact-aaaaacatgcaaagaataacgtaagatgacctgtcatcaca 1096759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 52 - 113
Target Start/End: Complemental strand, 819906 - 819845
Alignment:
Q  52 taaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcac 113  Q
    ||||| ||||||||| ||||||||||||||| ||||||||| ||||||||||||||| ||||    
T  819906 taaaacctactgaaattgactgaaaaacatgctaagaataacgtaagatgacctatcatcac 819845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 103
Target Start/End: Complemental strand, 2508797 - 2508728
Alignment:
Q  34 actcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    |||||||||||| |||| |||||  |||||||||||||||||||||||  ||||||||| ||||||||||    
T  2508797 actcatccttttcgctgttaaaacttactgaaaatgactgaaaaacatactaagaataacgtaagatgac 2508728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 22470471 - 22470411
Alignment:
Q  43 ttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    |||||||| |||||  |||||||||||||||||||||||| ||||||||| ||||||||||    
T  22470471 ttttgctggtaaaacatactgaaaatgactgaaaaacatgctaagaataacgtaagatgac 22470411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 154
Target Start/End: Complemental strand, 13906642 - 13906541
Alignment:
Q  53 aaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcctcaagtaacga 152  Q
    |||| ||||| ||| |||| |||||||||| |||||||||  ||   ||| || || ||||||||||| | |||||| ||||||||||||||||||||||    
T  13906642 aaaacctactaaaattgacagaaaaacatgctaagaataacttatagtgatctgtcatcacaaccccaaagttaaattgttgcttgtcctcaagtaacga 13906543  T
Q  153 aa 154  Q
    ||    
T  13906542 aa 13906541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 22247025 - 22247084
Alignment:
Q  43 ttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    |||||||| ||||| ||||||||||||||||||||| ||| ||||||||| ||||||||||    
T  22247025 ttttgctggtaaaacctactgaaaatgactgaaaaa-atgctaagaataacgtaagatgac 22247084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 114
Target Start/End: Original strand, 7805786 - 7805841
Alignment:
Q  59 tactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcaca 114  Q
    |||||||||||| ||||||||||| ||||||||| |||||||||||| || |||||    
T  7805786 tactgaaaatgattgaaaaacatgctaagaataacgtaagatgacctgtcatcaca 7805841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 105
Target Start/End: Complemental strand, 12372418 - 12372339
Alignment:
Q  26 gttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    |||| ||||||| |||||||||||  ||||| ||||||||||||| ||||||| ||| ||||||| | ||||||| ||||    
T  12372418 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgattgaaaaaaatgctaagaattacgtaagataacct 12372339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 18535799 - 18535858
Alignment:
Q  44 tttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    ||||||| ||||| ||||| ||| ||||||||||||||| ||||||||| ||||||||||    
T  18535799 tttgctggtaaaacctactaaaattgactgaaaaacatgctaagaataacgtaagatgac 18535858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 27363627 - 27363674
Alignment:
Q  131 gttgcttgtcctcaagtaacgaaataaaaacataaattattctttgca 178  Q
    |||||||||||||||||||||||| |||||||||  ||||||||||||    
T  27363627 gttgcttgtcctcaagtaacgaaagaaaaacatattttattctttgca 27363674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 20431472 - 20431518
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctac 61  Q
    ||||||||||||||| ||||||| |||||||||||||||||| ||||    
T  20431472 cataggcaatcgttctaatactcctcctttttgctgctaaaacctac 20431518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 20891714 - 20891652
Alignment:
Q  43 ttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    ||||| || ||||| |||||||||| |||||||||| ||| ||||||||| ||||||||||||    
T  20891714 ttttgttggtaaaacctactgaaaacgactgaaaaatatgctaagaataacgtaagatgacct 20891652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 2166125 - 2166042
Alignment:
Q  21 caatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    ||||||||  ||||||| ||||||||| |||||||| ||||||||||||||  |||||||||  |||||||| |||  |||||||    
T  2166125 caatcgttttaatactcctcctttttgttgctaaaacctactgaaaatgac-aaaaaacatgccaagaataacgtatcatgacct 2166042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 22450486 - 22450541
Alignment:
Q  52 taaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctat 107  Q
    ||||| ||| |||||| ||||||||| |||| ||||||||| ||||||||||||||    
T  22450486 taaaacctaatgaaaacgactgaaaagcatgctaagaataacgtaagatgacctat 22450541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 3114778 - 3114716
Alignment:
Q  43 ttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    |||||||| ||||| |||||| ||| |||||||||||||| ||||||||| || | |||||||    
T  3114778 ttttgctggtaaaacctactgtaaaagactgaaaaacatgctaagaataacgtcacatgacct 3114716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 164
Target Start/End: Complemental strand, 19167341 - 19167303
Alignment:
Q  126 aaatggttgcttgtcctcaagtaacgaaataaaaacata 164  Q
    |||| |||||||||||||||||||||||| |||||||||    
T  19167341 aaattgttgcttgtcctcaagtaacgaaacaaaaacata 19167303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 5270854 - 5270817
Alignment:
Q  64 aaaatgactgaaaaacatgttaagaataatgtaagatg 101  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  5270854 aaaatgactgaaaaacatcctaagaataatgtaagatg 5270817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 19387928 - 19387891
Alignment:
Q  43 ttttgctgctaaaatctactgaaaatgactgaaaaaca 80  Q
    |||||||| ||||| |||||||||||||||||||||||    
T  19387928 ttttgctggtaaaacctactgaaaatgactgaaaaaca 19387891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 105
Target Start/End: Original strand, 20886905 - 20886958
Alignment:
Q  52 taaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    ||||| ||| |||||| || ||||||||||| ||||||||| ||||||||||||    
T  20886905 taaaacctattgaaaacgattgaaaaacatgctaagaataacgtaagatgacct 20886958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 15669389 - 15669345
Alignment:
Q  61 ctgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    |||||| |||||||||| ||||  |||||||||||||||||||||    
T  15669389 ctgaaattgactgaaaatcatgccaagaataatgtaagatgacct 15669345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 17135175 - 17135219
Alignment:
Q  131 gttgcttgtcctcaagtaacgaaataaaaacataaattattcttt 175  Q
    ||||||| ||||||||||| |||| ||||||||| ||||||||||    
T  17135175 gttgcttttcctcaagtaatgaaagaaaaacatacattattcttt 17135219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 112; Significance: 9e-57; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 15 - 178
Target Start/End: Complemental strand, 15176529 - 15176367
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcaca 114  Q
    ||||||||||||||| ||||||| |||||||||||||||||| ||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||    
T  15176529 cataggcaatcgttctaatactcctcctttttgctgctaaaacctactgaaattgactgaaacacatgctaagaataatgtaagatgacctatcgtcaca 15176430  T
Q  115 accccagacttaaatggttgcttgtcctcaagtaacgaaataaaaacataaattattctttgca 178  Q
    |||||| |||||||| |||||||||||||||||||||||| |||||||||   |||||||||||    
T  15176429 accccaaacttaaat-gttgcttgtcctcaagtaacgaaagaaaaacatattgtattctttgca 15176367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 15 - 178
Target Start/End: Original strand, 17510904 - 17511067
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcaca 114  Q
    ||||||||||||||| ||||||| |||||||||| ||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||    
T  17510904 cataggcaatcgttctaatactcctcctttttgcagctaaaacctactgaaagtgactgaaaaacatgctaagaataatgtaagatgacctatcatcaca 17511003  T
Q  115 accccagacttaaatggttgcttgtcctcaagtaacgaaataaaaacataaattattctttgca 178  Q
    ||| || |||||||   ||||||||||||||||||||||| ||||||||   ||||||||||||    
T  17511004 acctcaaacttaaactattgcttgtcctcaagtaacgaaagaaaaacatgttttattctttgca 17511067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 15 - 175
Target Start/End: Complemental strand, 29765489 - 29765328
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaa-catgttaagaataatgtaagatgacctatcgtcac 113  Q
    ||||||||||||||| ||||| | |||||||||||||||||| ||||||||||| ||| ||||| |||| ||||||||| |||||||||||| || ||||    
T  29765489 cataggcaatcgttctaatacacttcctttttgctgctaaaacctactgaaaataactaaaaaaacatgctaagaataacgtaagatgacctgtcatcac 29765390  T
Q  114 aaccccagacttaaatggttgcttgtcctcaagtaacgaaataaaaacataaattattcttt 175  Q
    ||||||| |||||||| |||||||||||||||||||||||| ||||||| || |||||||||    
T  29765389 aaccccaaacttaaattgttgcttgtcctcaagtaacgaaagaaaaacacaatttattcttt 29765328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 58 - 178
Target Start/End: Original strand, 25227302 - 25227422
Alignment:
Q  58 ctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcctcaagtaacgaaataa 157  Q
    ||||||||||| |||||||||| || |||||||||||||||||||||| || ||||||||||| |||||||| |||||||||| ||||||||||||| ||    
T  25227302 ctactgaaaataactgaaaaacctgctaagaataatgtaagatgacctgtcatcacaaccccaaacttaaattgttgcttgtcttcaagtaacgaaagaa 25227401  T
Q  158 aaacataaattattctttgca 178  Q
    |||||||| ||||||||||||    
T  25227402 aaacataatttattctttgca 25227422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 15 - 171
Target Start/End: Complemental strand, 18446956 - 18446800
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcaca 114  Q
    |||||| ||| |||| ||||||| |||||||||||||||||  |||||| |||| ||||||||||||| ||| ||||| ||||||||||||||| |||||    
T  18446956 cataggaaatggttctaatactcctcctttttgctgctaaatcctactggaaataactgaaaaacatggtaaaaataacgtaagatgacctatcatcaca 18446857  T
Q  115 accccagacttaaatggttgcttgtcctcaagtaacgaaataaaaacataaattatt 171  Q
    |||||| |||||||  |||||||||||||  ||||||||| |||||| ||| |||||    
T  18446856 accccaaacttaaaatgttgcttgtcctcttgtaacgaaagaaaaacttaatttatt 18446800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 24583268 - 24583178
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||  ||| |||||||    
T  24583268 cataggcaatcgttctaatactcctcctttttgctgctaaaatctactaaaaatgactgaaaaacatgctaagaataacataaaatgacct 24583178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 70 - 219
Target Start/End: Original strand, 18570547 - 18570693
Alignment:
Q  70 actgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcctcaagtaacgaaataaaaacataaatta 169  Q
    ||||||||| ||| ||||||||| ||||||||| || || ||||||||||| ||||| || ||||||||||| ||||||||||||||| ||||||| |||    
T  18570547 actgaaaaatatgctaagaataacgtaagatgatctgtcatcacaaccccaaacttagattgttgcttgtccacaagtaacgaaataataacataattta 18570646  T
Q  170 ttctttgcannnnnnnncttcaagaaaaacatacctttccgggagttgtg 219  Q
    |||||||||         |||| |||||| ||||||||||||||||||||    
T  18570647 ttctttgcatttttt---ttcaggaaaaagatacctttccgggagttgtg 18570693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 178
Target Start/End: Complemental strand, 17100299 - 17100141
Alignment:
Q  19 ggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccc 118  Q
    ||||||| ||| ||||||  |||||||||||||||||| ||  ||||||| | ||||||||||| |||||||||  | ||||||||| || |||||| ||    
T  17100299 ggcaatcattcaaatacttctcctttttgctgctaaaaccttatgaaaataattgaaaaacatgctaagaataacttgagatgacctgtcatcacaa-cc 17100201  T
Q  119 cagacttaaatggttgcttgtcctcaagtaacgaaataaaaacataaattattctttgca 178  Q
    || ||||| || ||||||||||||  |||||||||| ||||| |||| ||||||||||||    
T  17100200 caaacttagattgttgcttgtcctttagtaacgaaagaaaaaaataatttattctttgca 17100141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 15 - 105
Target Start/End: Original strand, 20400334 - 20400424
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    |||||| |||||||| ||||||| |||||||||||||||||| | |||||||||||||||||| |||| ||||||||| ||||||||||||    
T  20400334 cataggaaatcgttctaatactcctcctttttgctgctaaaacccactgaaaatgactgaaaagcatgctaagaataacgtaagatgacct 20400424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 13313368 - 13313284
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaaga 99  Q
    |||||||||| |||| ||||||| |||||||||||||||||| ||| ||||||||||||||||||||| ||||||||| ||||||    
T  13313368 cataggcaattgttctaatactcctcctttttgctgctaaaacctattgaaaatgactgaaaaacatgctaagaataacgtaaga 13313284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 19704986 - 19705074
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    ||||||||||||||| ||||||| | |||| ||||| ||||| ||||||||||||||||||||||||  ||||||||| ||||||||||    
T  19704986 cataggcaatcgttctaatactccttctttatgctgttaaaacctactgaaaatgactgaaaaacatactaagaataacgtaagatgac 19705074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 172
Target Start/End: Complemental strand, 25180764 - 25180660
Alignment:
Q  69 gactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcctcaagtaacg-aaataaaaacataaat 167  Q
    ||||||||||||||||||| |||| |||||||||| | || ||||||||||| |||||||| ||| ||| ||||||||||||| ||| |||||||||| |    
T  25180764 gactgaaaaacatgttaaggataacgtaagatgacatgtcatcacaaccccaaacttaaatagtttcttatcctcaagtaacgaaaagaaaaacataagt 25180665  T
Q  168 tattc 172  Q
    |||||    
T  25180664 tattc 25180660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 178
Target Start/End: Complemental strand, 26829563 - 26829401
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcaca 114  Q
    ||||||||||||||| | ||||| ||| ||||| |||||    ||||| ||||  ||||||||||||| ||||||||| |||||||||| | || | |||    
T  26829563 cataggcaatcgttctattactcctccattttgttgctatttcctactaaaaaatactgaaaaacatgctaagaataacgtaagatgacgtgtcattaca 26829464  T
Q  115 accccagacttaaatggttgcttgtcctcaagtaacgaaataaaaacataaattattctttgca 178  Q
    |||||| ||||| |  ||| |||||||||||||||| ||| |||||||||| ||| ||||||||    
T  26829463 accccaaacttagactgtttcttgtcctcaagtaac-aaaaaaaaacataatttagtctttgca 26829401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 105
Target Start/End: Original strand, 28621604 - 28621694
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    ||||||||||||||| ||||||||| ||||||  |||||||| ||| ||||||| ||||||||||||| ||||||||| || |||||||||    
T  28621604 cataggcaatcgttctaatactcattcttttttatgctaaaacctaatgaaaataactgaaaaacatgctaagaataacgttagatgacct 28621694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 26 - 173
Target Start/End: Original strand, 21316794 - 21316941
Alignment:
Q  26 gttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagactt 125  Q
    |||| |||||||  || |||||||||| | | ||||| ||||  | ||||||||||| ||||||||| |||||||||||| || |||||||| || ||||    
T  21316794 gttctaatactccgccattttgctgcttagaactactaaaaagaattgaaaaacatgctaagaataacgtaagatgacctgtcatcacaacctcaaactt 21316893  T
Q  126 aaatggttgcttgtcctcaagtaacgaaataaaaacataaattattct 173  Q
    |||| ||||||||||    ||||| |||| |||||||||| |||||||    
T  21316894 aaattgttgcttgtctaagagtaaagaaagaaaaacataatttattct 21316941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 98
Target Start/End: Complemental strand, 24090975 - 24090892
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaag 98  Q
    |||||||||| |||| ||||||| |||||||||||||||||| ||| | ||||| ||||||||||||| ||||||||| |||||    
T  24090975 cataggcaattgttctaatactcttcctttttgctgctaaaacctaattaaaataactgaaaaacatgctaagaataacgtaag 24090892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 23867926 - 23867836
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    ||||||||||||||| ||||||| || | ||||||||||||| ||||| |||||| |||||||||||  ||||||| | ||||||||||||    
T  23867926 cataggcaatcgttctaatactcctcgtctttgctgctaaaacctactaaaaatgcctgaaaaacatactaagaattacgtaagatgacct 23867836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 162
Target Start/End: Original strand, 24750883 - 24750972
Alignment:
Q  73 gaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcctcaagtaacgaaataaaaaca 162  Q
    |||||||||| ||||||||||||||||| || | || ||||||||| | |||||||   |||||||||||||||||| ||||||||||||    
T  24750883 gaaaaacatgctaagaataatgtaagataacatgtcatcacaaccctaaacttaaactattgcttgtcctcaagtaaagaaataaaaaca 24750972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 59 - 159
Target Start/End: Complemental strand, 13833656 - 13833556
Alignment:
Q  59 tactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcctcaagtaacgaaataaa 158  Q
    ||||||||||||||||||||||||  |||||||| ||||||| || | || ||||||  ||| |||||||| ||||| |||||||| ||||||||| |||    
T  13833656 tactgaaaatgactgaaaaacatgcaaagaataacgtaagattacttgtcatcacaatgccaaacttaaattgttgcctgtcctcaggtaacgaaagaaa 13833557  T
Q  159 a 159  Q
    |    
T  13833556 a 13833556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 24520098 - 24520022
Alignment:
Q  16 ataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataa 92  Q
    ||||||||| |||| |||||| |||||||||||| |||||  ||||||||||| ||||||||||||| |||||||||    
T  24520098 ataggcaattgttctaatacttatcctttttgctactaaatcctactgaaaataactgaaaaacatgctaagaataa 24520022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 29381058 - 29380967
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgact-gaaaaacatgttaagaataatgtaagatgacct 105  Q
    ||||||||||||||| ||||||| ||||||||||| |||||| ||| ||||| ||| |  ||||||||| ||||||||| ||||||||||||    
T  29381058 cataggcaatcgttctaatactcctcctttttgctactaaaacctattgaaattgaataaaaaaacatgctaagaataacgtaagatgacct 29380967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 24389757 - 24389846
Alignment:
Q  16 ataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    ||||||||| |||| ||||||| || |||||| |||||||| ||||||||||| ||| |||||| |  ||||||||| ||||||||||||    
T  24389757 ataggcaattgttctaatactcctcatttttgttgctaaaacctactgaaaataactaaaaaacttactaagaataacgtaagatgacct 24389846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 24380450 - 24380362
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    |||||||||| |||| ||||||| ||  || ||||| ||||| ||||||||| ||| ||||||||||| ||||||||| ||||||||||    
T  24380450 cataggcaattgttctaatactcctctgttctgctggtaaaacctactgaaattgagtgaaaaacatgctaagaataacgtaagatgac 24380362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 98
Target Start/End: Original strand, 34499244 - 34499311
Alignment:
Q  31 aatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaag 98  Q
    |||||||||||||||||||| ||||||||| | ||||||||||||| ||||| ||| ||||| |||||    
T  34499244 aatactcatcctttttgctggtaaaatctaataaaaatgactgaaagacatgctaaaaataacgtaag 34499311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 105
Target Start/End: Original strand, 19265822 - 19265912
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    |||||||||| |||| ||||||| ||||||||| || ||||  ||||| |||   ||||||||||||| ||||||||| ||||||||||||    
T  19265822 cataggcaattgttctaatactcctcctttttgttgttaaatcctactaaaataaactgaaaaacatgctaagaataacgtaagatgacct 19265912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 52 - 178
Target Start/End: Original strand, 24908941 - 24909067
Alignment:
Q  52 taaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcctcaagtaacg 151  Q
    ||||| ||| ||||| ||| ||||||||||| ||| ||||| ||||  |||||| || ||||| ||||| |||||| | |||| || ||||||| || ||    
T  24908941 taaaacctattgaaattgattgaaaaacatgctaaaaataacgtaatttgacctgtcatcacagccccaaacttaacttgttgtttatcctcaattatcg 24909040  T
Q  152 aaataaaaacataaattattctttgca 178  Q
    ||| |||||||||  ||||||||||||    
T  24909041 aaagaaaaacatattttattctttgca 24909067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 52 - 178
Target Start/End: Original strand, 24911162 - 24911288
Alignment:
Q  52 taaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcctcaagtaacg 151  Q
    ||||| ||| ||||| ||| ||||||||||| ||| ||||| ||||  |||||| || ||||| ||||| |||||| | |||| || ||||||| || ||    
T  24911162 taaaacctattgaaattgattgaaaaacatgctaaaaataacgtaatttgacctgtcatcacagccccaaacttaacttgttgtttatcctcaattatcg 24911261  T
Q  152 aaataaaaacataaattattctttgca 178  Q
    ||| |||||||||  ||||||||||||    
T  24911262 aaagaaaaacatattttattctttgca 24911288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 103
Target Start/End: Original strand, 5151964 - 5152007
Alignment:
Q  60 actgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||    
T  5151964 actgaaaattactgaaaaacatgttaagaataacgtaagatgac 5152007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 103
Target Start/End: Original strand, 17650006 - 17650049
Alignment:
Q  60 actgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    |||||||| |||||||||||||||||||||||| ||||||||||    
T  17650006 actgaaaacgactgaaaaacatgttaagaataacgtaagatgac 17650049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 15557405 - 15557455
Alignment:
Q  53 aaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    |||| |||||||||||||||||||||||   ||||||||||||||||||||    
T  15557405 aaaacctactgaaaatgactgaaaaacagactaagaataatgtaagatgac 15557455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 103
Target Start/End: Complemental strand, 21695472 - 21695422
Alignment:
Q  53 aaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    |||| ||||||||| ||||||||||||||| ||||||||| ||||||||||    
T  21695472 aaaacctactgaaattgactgaaaaacatgctaagaataacgtaagatgac 21695422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 30117727 - 30117665
Alignment:
Q  43 ttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    |||||||| ||||| ||||||||||||| ||||||||||| ||| ||||| ||||||| ||||    
T  30117727 ttttgctggtaaaacctactgaaaatgaatgaaaaacatgctaaaaataacgtaagataacct 30117665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 24382047 - 24381990
Alignment:
Q  51 ctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatc 108  Q
    |||||| ||||||||||||||| ||| ||||| ||||||||| | |||||||||||||    
T  24382047 ctaaaacctactgaaaatgactaaaatacatgctaagaataacgaaagatgacctatc 24381990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 22501861 - 22501920
Alignment:
Q  43 ttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatga 102  Q
    |||||||| ||||| | |||||||| || ||||||||||| ||||||||| |||||||||    
T  22501861 ttttgctggtaaaaccaactgaaaaagattgaaaaacatgataagaataacgtaagatga 22501920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 14271869 - 14271931
Alignment:
Q  43 ttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    |||||||  ||||| |||||||||| |  ||||||||||| ||||||||| ||||||||||||    
T  14271869 ttttgctagtaaaacctactgaaaaaggttgaaaaacatgctaagaataacgtaagatgacct 14271931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 102
Target Start/End: Original strand, 18836841 - 18836879
Alignment:
Q  64 aaaatgactgaaaaacatgttaagaataatgtaagatga 102  Q
    ||||||| ||||||||||| |||||||||||||||||||    
T  18836841 aaaatgattgaaaaacatgctaagaataatgtaagatga 18836879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 25481602 - 25481512
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    ||||||||||||||| ||||||| ||| |||||||||||    ||||| ||| | | || ||| |||| ||||||||| ||||||||||||    
T  25481602 cataggcaatcgttctaatactcctccattttgctgctatttcctactaaaattaattgtaaagcatgctaagaataacgtaagatgacct 25481512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 17970582 - 17970627
Alignment:
Q  97 agatgacctatcgtcacaaccccagacttaaatggttgcttgtcct 142  Q
    ||||||||| || ||||||||||| |||||||| ||||||||||||    
T  17970582 agatgacctgtcatcacaaccccaaacttaaattgttgcttgtcct 17970627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 101
Target Start/End: Original strand, 28858873 - 28858921
Alignment:
Q  52 taaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatg 101  Q
    ||||| ||||| |||||||||||||| |||| ||||||||||||||||||    
T  28858873 taaaacctactaaaaatgactgaaaa-catgctaagaataatgtaagatg 28858921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 1e-46; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 21 - 219
Target Start/End: Original strand, 11782498 - 11782692
Alignment:
Q  21 caatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaacccca 120  Q
    ||||||||| ||||||| | ||||||||||  |||| ||||| ||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||    
T  11782498 caatcgttctaatactcttactttttgctgtaaaaacctacttaaaatgactaaaaaacatgttaagaataacgtaagatgacctatcatcacaacccca 11782597  T
Q  121 gacttaaatggttgcttgtcctcaagtaacgaaataaaaacataaattattctttgcannnnnnnncttcaagaaaaacatacctttccgggagttgtg 219  Q
     |||||||  | |||||||||||||||||||||| ||||| |||||||||||||||||         || | |||||||||||||||||||||||||||    
T  11782598 aacttaaaatggtgcttgtcctcaagtaacgaaagaaaaatataaattattctttgcattttt----tttaggaaaaacatacctttccgggagttgtg 11782692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 15166471 - 15166558
Alignment:
Q  18 aggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    |||||||||||| ||||||| || ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15166471 aggcaatcgttctaatactcctcgtttttgctgctaaaacctactgaaaatgactgaaaaacatgctaagaataatgtaagatgacct 15166558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 25096300 - 25096496
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcaca 114  Q
    ||||||||||||||| |||||||   | ||||||||| |    ||||||||||| |||| |||||||| |||||| || |||||||||| | || |||||    
T  25096300 cataggcaatcgttctaatactc---cattttgctgcaatttcctactgaaaattactgtaaaacatgctaagaacaacgtaagatgacatgtcatcaca 25096396  T
Q  115 accccagacttaaatggttgcttgtcctcaagtaacgaaataaaaacataaattattctttgcannnnnnnncttcaagaaaaacatacctttccgggag 214  Q
    || ||| ||||| |  |||||||||| ||||||||||||| |||||||||| ||||||||||||         |||| ||||||||||||||||||||||    
T  25096397 acaccaaacttagaatgttgcttgtcatcaagtaacgaaagaaaaacataatttattctttgcatttt-----ttcaggaaaaacatacctttccgggag 25096491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 12616714 - 12616802
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    |||||| ||| |||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| | ||||||||||    
T  12616714 cataggaaattgttctaatactcatcctttttgctgctaaaacctactgaaaaagactgaaaaacatgttaagaattacgtaagatgac 12616802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 74 - 219
Target Start/End: Original strand, 4617153 - 4617293
Alignment:
Q  74 aaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcctcaagtaacgaaataaaaacataaattattct 173  Q
    ||||||| | ||||||||| |||||||||||| || ||||||||||| ||||| | |||||||| |||||||||||||||| |||||||||| ||||| |    
T  4617153 aaaaacaagctaagaataacgtaagatgacctgtcatcacaaccccaaacttagacggttgcttatcctcaagtaacgaaagaaaaacataatttattat 4617252  T
Q  174 ttgcannnnnnnncttcaagaaaaacatacctttccgggagttgtg 219  Q
    |||||         |||| ||||||||||||||||||| |||||||    
T  4617253 ttgcatttt-----ttcaggaaaaacatacctttccggaagttgtg 4617293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 17335452 - 17335364
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    ||||||||||||||| ||||||| ||||||||||| ||||||  ||||||||||||||||||||||||  |||||||| ||||||||||    
T  17335452 cataggcaatcgttctaatactcctcctttttgcttctaaaacttactgaaaatgactgaaaaacatgccaagaataacgtaagatgac 17335364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 105
Target Start/End: Original strand, 22171748 - 22171838
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    ||||||||||| ||| ||||||| |||||||||||||||||| ||| |||||||  | |||||||||| ||||||||||||||||||||||    
T  22171748 cataggcaatcattctaatactcctcctttttgctgctaaaacctaatgaaaatagcagaaaaacatgctaagaataatgtaagatgacct 22171838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 17711307 - 17711388
Alignment:
Q  16 ataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaa 97  Q
    |||||||||||||| ||||||| || ||||||| ||||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  17711307 ataggcaatcgttctaatactcctcatttttgcagctaaaacctactgaaaatgactaaaaaacatgctaagaataatgtaa 17711388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 7583792 - 7583876
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaaga 99  Q
    |||||||||| |||| ||||||| |||||||||||||||||| ||||||||||||| ||||||| ||| ||||||||| ||||||    
T  7583792 cataggcaattgttctaatactcctcctttttgctgctaaaacctactgaaaatgattgaaaaagatgctaagaataacgtaaga 7583876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 115
Target Start/End: Original strand, 17218529 - 17218628
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcaca 114  Q
    ||||||||||||||| ||||||| ||||||||||| | ||||  |||||||  ||||||||||||||| ||||||||| ||||||||||||||| |||||    
T  17218529 cataggcaatcgttctaatactcctcctttttgcttcgaaaacttactgaat-tgactgaaaaacatgctaagaataacgtaagatgacctatcatcaca 17218627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 101
Target Start/End: Original strand, 10106311 - 10106381
Alignment:
Q  31 aatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatg 101  Q
    ||||||| |||||||||| ||||||| |||||||||||||| |||||||||| ||||||||||||||||||    
T  10106311 aatactcctcctttttgcagctaaaacctactgaaaatgacagaaaaacatgctaagaataatgtaagatg 10106381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 31 - 152
Target Start/End: Original strand, 9054021 - 9054142
Alignment:
Q  31 aatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagacttaaatg 130  Q
    ||||||||||  || ||||  ||||| |||||||||||||||| |||||||| ||||| ||| ||||||| | || || ||||||||||| ||||||||     
T  9054021 aatactcatctattctgcttgtaaaacctactgaaaatgactgcaaaacatgctaagattaacgtaagatcaactgtcatcacaaccccaaacttaaatt 9054120  T
Q  131 gttgcttgtcctcaagtaacga 152  Q
    ||  ||||||||||||||||||    
T  9054121 gtcacttgtcctcaagtaacga 9054142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 18750824 - 18750912
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    |||||||||| | || ||||||| |||||||||||||||||  ||||||||||| ||||||||| ||| ||| ||||||||||||||||    
T  18750824 cataggcaattgctctaatactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgac 18750912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 70 - 172
Target Start/End: Complemental strand, 19919181 - 19919077
Alignment:
Q  70 actgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccaga-cttaaatggttgcttgtcctcaagtaacg-aaataaaaacataaat 167  Q
    ||||||||||||| ||||||||| || |||||| || || ||||||| ||| | ||||||||||||||||||||||||||||| ||| |||||||||| |    
T  19919181 actgaaaaacatgctaagaataacgtcagatgatctgtcatcacaactccaaaacttaaatggttgcttgtcctcaagtaacgaaaagaaaaacataagt 19919082  T
Q  168 tattc 172  Q
    |||||    
T  19919081 tattc 19919077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 8968142 - 8968080
Alignment:
Q  41 ctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    |||||||||||||||| ||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  8968142 ctttttgctgctaaaacctacttaaaatgactgaaaaacatgctaagaataacgtaagatgac 8968080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 9536836 - 9536762
Alignment:
Q  31 aatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    ||||||| |||||||||||||||||| ||||||||||| | ||||||||||| |||||||||  ||||| |||||    
T  9536836 aatactcctcctttttgctgctaaaacctactgaaaataattgaaaaacatgctaagaataacataagaggacct 9536762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 19556636 - 19556548
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    ||||||||||||||| |||||||  |||| ||| |||||||| ||| |||||||||||||||| |||| ||||||||| ||||||||||||    
T  19556636 cataggcaatcgttctaatactcc-ccttattggtgctaaaacctattgaaaatgactgaaaa-catgctaagaataacgtaagatgacct 19556548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 25025134 - 25025196
Alignment:
Q  43 ttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    |||||||| ||||| ||||| ||||||||||||||||||| ||||||||| ||||||||||||    
T  25025134 ttttgctggtaaaacctactaaaaatgactgaaaaacatgctaagaataacgtaagatgacct 25025196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 88 - 219
Target Start/End: Original strand, 17108769 - 17108894
Alignment:
Q  88 aataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcctcaagtaacgaaataaaaacataaattattctttgcannnnnnnnc 187  Q
    ||||| |||||||||| | || || | |||||| |||||||   || |||||||||||||||||||| |||||||||| ||||||||||||             
T  17108769 aataacgtaagatgacttgtcatcccgaccccaaacttaaaatttttcttgtcctcaagtaacgaaagaaaaacataatttattctttgcatgt------ 17108862  T
Q  188 ttcaagaaaaacatacctttccgggagttgtg 219  Q
    || | |||||||||||||||||||||||||||    
T  17108863 tttaggaaaaacatacctttccgggagttgtg 17108894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 16928925 - 16928991
Alignment:
Q  16 ataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatg 82  Q
    |||| ||||| ||| ||||||| || ||||||| ||||||| |||||||||||||||||||||||||    
T  16928925 atagacaatcattctaatactcctcatttttgccgctaaaacctactgaaaatgactgaaaaacatg 16928991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 154
Target Start/End: Original strand, 22346138 - 22346218
Alignment:
Q  74 aaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcctcaagtaacgaaa 154  Q
    ||||| ||| ||||||||| |||||||||| | || ||||||||| | |||||||| ||||||| ||||||||||| ||||    
T  22346138 aaaaatatgctaagaataacgtaagatgacttgtcatcacaacccgaaacttaaattgttgcttatcctcaagtaatgaaa 22346218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 115
Target Start/End: Original strand, 17434471 - 17434534
Alignment:
Q  52 taaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaa 115  Q
    ||||| ||||||||||||||| ||||||||| ||| ||||| |||||||||||| || ||||||    
T  17434471 taaaacctactgaaaatgacttaaaaacatgctaaaaataacgtaagatgacctgtcatcacaa 17434534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 9849776 - 9849714
Alignment:
Q  43 ttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    ||||| || ||||| ||||| ||||||||||||||||||  ||||||||| ||||||||||||    
T  9849776 ttttgttggtaaaacctactaaaaatgactgaaaaacatactaagaataacgtaagatgacct 9849714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 102
Target Start/End: Complemental strand, 12836130 - 12836080
Alignment:
Q  52 taaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatga 102  Q
    |||||| |||| ||||||||||||||||||| ||||||||| |||||||||    
T  12836130 taaaatatactaaaaatgactgaaaaacatgctaagaataacgtaagatga 12836080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 13588745 - 13588795
Alignment:
Q  52 taaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatga 102  Q
    ||||||||||||||||||| ||||||||||| ||| ||||| |||||||||    
T  13588745 taaaatctactgaaaatgattgaaaaacatgctaataataacgtaagatga 13588795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 17108718 - 17108771
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaat 68  Q
    ||||||||||  ||| |||||||||||||||||||| ||||| |||||||||||    
T  17108718 cataggcaatttttctaatactcatcctttttgctgttaaaacctactgaaaat 17108771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 11252226 - 11252136
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    ||||||||||||||| ||||||| |  |||||  |||||||  ||||| |||   ||||||||||||| ||| ||||| ||||||||||||    
T  11252226 cataggcaatcgttctaatactcctttttttttttgctaaatcctactaaaataaactgaaaaacatgctaaaaataacgtaagatgacct 11252136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 102
Target Start/End: Complemental strand, 22350308 - 22350250
Alignment:
Q  44 tttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatga 102  Q
    ||||||| ||||| ||||| |||   ||||||||||||| |||||||||||||||||||    
T  22350308 tttgctggtaaaacctactaaaataaactgaaaaacatgctaagaataatgtaagatga 22350250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 108
Target Start/End: Complemental strand, 9263446 - 9263354
Alignment:
Q  16 ataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatc 108  Q
    |||| |||| |||| ||||||| ||  || ||||| ||||| ||| ||||  ||||||||||||||| ||| ||||| ||||||| |||||||    
T  9263446 atagacaattgttctaatactcctcagttctgctgataaaacctattgaatttgactgaaaaacatgctaaaaataacgtaagataacctatc 9263354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 20828208 - 20828152
Alignment:
Q  43 ttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaaga 99  Q
    |||||||||||| | ||| |||||| |||||||||| ||| ||||||||| ||||||    
T  20828208 ttttgctgctaatacctattgaaaaagactgaaaaagatgctaagaataacgtaaga 20828152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 3e-41; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 19201458 - 19201658
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcaca 114  Q
    ||||||||||||||| |||| ||  ||||||||||||||||  ||||||||||| || ||||||||||||||||||||  ||||||||||| || |||||    
T  19201458 cataggcaatcgttctaatagtccacctttttgctgctaaatcctactgaaaataacagaaaaacatgttaagaataacataagatgacctgtcatcaca 19201557  T
Q  115 accccagacttaaatggttgcttgtcctcaagtaacgaaataaaaacataaattattctttgcannnnnnnncttcaagaaaaacatacctttccgggag 214  Q
    |||||| ||||| |  |||||||||| | ||||||||||| |||||||||| ||||||||||||          ||| ||||||||||||||||||||||    
T  19201558 accccaaacttagactgttgcttgtcttgaagtaacgaaagaaaaacataatttattctttgcattttta----tcaggaaaaacatacctttccgggag 19201653  T
Q  215 ttgtg 219  Q
    |||||    
T  19201654 ttgtg 19201658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 19 - 178
Target Start/End: Complemental strand, 39270365 - 39270207
Alignment:
Q  19 ggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccc 118  Q
    ||||||||||| ||||||| |||||||| |||||||||  |||| ||||||||||||||||||| ||||| ||| |||||||||| | || |||||||||    
T  39270365 ggcaatcgttctaatactcctcctttttactgctaaaacttactaaaaatgactgaaaaacatgctaaga-taacgtaagatgacatgtcatcacaaccc 39270267  T
Q  119 cagacttaaatggttgcttgtcctcaagtaacgaaataaaaacataaattattctttgca 178  Q
    || |||||||| |||||||||||||||||||||| | |||||| || |||||||||||||    
T  39270266 caaacttaaattgttgcttgtcctcaagtaacgagagaaaaacgtatattattctttgca 39270207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 46 - 178
Target Start/End: Complemental strand, 6039363 - 6039231
Alignment:
Q  46 tgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcctcaa 145  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |  | ||||||||||  | |||||  |||| || |||||||    
T  6039363 tgctggtaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacatgacatcacaaccccgaatttaaactgttgtttatcctcaa 6039264  T
Q  146 gtaacgaaataaaaacataaattattctttgca 178  Q
    ||||||||| |||||||||  ||||||||||||    
T  6039263 gtaacgaaagaaaaacatattttattctttgca 6039231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 13287807 - 13287608
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcaca 114  Q
    ||||||||||||||| ||||||||||||||||| || ||    ||||| |||   ||||||||||||||||||||||| |||||||||| | || |||||    
T  13287807 cataggcaatcgttctaatactcatcctttttgatgttatttcctactaaaataaactgaaaaacatgttaagaataacgtaagatgacttgtcatcaca 13287708  T
Q  115 accccagacttaaatggttgcttgtcctcaagtaacgaaataaaaacataaattattctttgcannnnnnnncttcaagaaaaacatacctttccgggag 214  Q
    |||||| ||||| |  ||| |||||||||||||||||||| ||||||||||  |||||||||||         || | ||||||||||||||||||||||    
T  13287707 accccaaacttagactgtttcttgtcctcaagtaacgaaagaaaaacataatgtattctttgcatttt-----tttaggaaaaacatacctttccgggag 13287613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 178
Target Start/End: Complemental strand, 15170845 - 15170698
Alignment:
Q  31 aatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagacttaaatg 130  Q
    ||||||| ||| |||| ||| | ||||||| |||||||||||| |||| ||  ||||||||||||||| |||||| || ||||||||||| || ||||      
T  15170845 aatactcctccgttttactggtgaaatctattgaaaatgactggaaaatattgtaagaataatgtaaggtgacctgtcatcacaaccccaaacataaact 15170746  T
Q  131 gttgcttgtcctcaagtaacgaaataaaaacataaattattctttgca 178  Q
    |||||||||||||||||||||||| |||||||||  ||||||||||||    
T  15170745 gttgcttgtcctcaagtaacgaaagaaaaacatattttattctttgca 15170698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 42 - 178
Target Start/End: Complemental strand, 19201392 - 19201256
Alignment:
Q  42 tttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcc 141  Q
    ||||||||||||||  ||| | ||||| ||||||||||||| ||||||||| ||||||||| || || ||||||||||| || || |  ||||||||| |    
T  19201392 tttttgctgctaaagcctaataaaaattactgaaaaacatgctaagaataacgtaagatgatctgtcatcacaaccccaaacatagactgttgcttgttc 19201293  T
Q  142 tcaagtaacgaaataaaaacataaattattctttgca 178  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  19201292 tcaagtaacgaaagaaaaacataatttattctttgca 19201256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 11804698 - 11804785
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatga 102  Q
    ||||||||||||||| ||||||  |||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||    
T  11804698 cataggcaatcgttctaatactgctcctttttgctgctaaaacctactgaaaatgactgaaaaacatgttatgaataacgtaagatga 11804785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 18986841 - 18986754
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatga 102  Q
    |||||||| |||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||    
T  18986841 cataggcagtcgttctaatactcctcctttttgctgctaaaatctactgaaattgactgaaaaacatgctaagaataacgtaagatga 18986754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 19001469 - 19001382
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatga 102  Q
    |||||||| |||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||    
T  19001469 cataggcagtcgttctaatactcctcctttttgctgctaaaatctactgaaattgactgaaaaacatgctaagaataacgtaagatga 19001382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 2506862 - 2506754
Alignment:
Q  70 actgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcctcaagtaacgaaataaaaacataaatta 169  Q
    ||||||||||||| | ||||||| |||||||||||| || ||||||||||| |||||||| ||||||||||||||||||| |||| ||||||| |  |||    
T  2506862 actgaaaaacatgctgagaataacgtaagatgacctgtcatcacaaccccaaacttaaatagttgcttgtcctcaagtaaagaaagaaaaacaaatttta 2506763  T
Q  170 ttctttgca 178  Q
    |||||||||    
T  2506762 ttctttgca 2506754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 26249166 - 26249082
Alignment:
Q  21 caatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    |||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||| ||||||||||||    
T  26249166 caattgttctaatactcatcctttttgctgctaaaacctactgaaaatgactgaaaaacatgctatgaataacgtaagatgacct 26249082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 178
Target Start/End: Original strand, 144976 - 145136
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcaca 114  Q
    |||||||||| | || ||||||||||| |||||||| ||||| ||||| |||||||||| ||||||||||||||||||  ||||||| | | || | ||     
T  144976 cataggcaattgctctaatactcatccgttttgctggtaaaacctactaaaaatgactg-aaaacatgttaagaataacataagatg-catgtcataac- 145072  T
Q  115 accccagacttaaatggttgcttgtcctcaagtaacgaaataaaaacataaattattctttgca 178  Q
    || ||| |||||||  |||||||||||||||||||||||||||||||| || ||||| ||||||    
T  145073 actccaaacttaaactgttgcttgtcctcaagtaacgaaataaaaacacaatttattttttgca 145136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 178
Target Start/End: Original strand, 19154846 - 19154984
Alignment:
Q  43 ttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcct 142  Q
    |||||||| | ||| ||||||||||   |||||||||||| ||||||||| |||||||||||| || ||||||||||| ||||||   ||||||||||||    
T  19154846 ttttgctggttaaacctactgaaaaaagctgaaaaacatgctaagaataacgtaagatgacctgtcatcacaaccccaaacttaatctgttgcttgtcct 19154945  T
Q  143 caagtaacgaaa-taaaaacataaa--ttattctttgca 178  Q
    ||||||||||||  |||||||||||  ||||||||||||    
T  19154946 caagtaacgaaagaaaaaacataaaagttattctttgca 19154984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 178
Target Start/End: Original strand, 20754245 - 20754383
Alignment:
Q  43 ttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcct 142  Q
    |||||||| | ||| ||||||||||   |||||||||||| ||||||||| |||||||||||| || ||||||||||| ||||||   ||||||||||||    
T  20754245 ttttgctggttaaacctactgaaaaaagctgaaaaacatgctaagaataacgtaagatgacctgtcatcacaaccccaaacttaatctgttgcttgtcct 20754344  T
Q  143 caagtaacgaaa-taaaaacataaa--ttattctttgca 178  Q
    ||||||||||||  |||||||||||  ||||||||||||    
T  20754345 caagtaacgaaagaaaaaacataaaagttattctttgca 20754383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 3585619 - 3585531
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    ||||||||||| ||  ||||||| ||| |||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||    
T  3585619 cataggcaatcattttaatactcctccattttgctgctaaaacctactgaaaatgattgaaaaacatgctaagaataatgtaagatgac 3585531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 13252749 - 13252641
Alignment:
Q  70 actgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcctcaagtaacgaaataaaaacataaatta 169  Q
    ||||||||||||| ||||||||| ||||||||||||  | ||||||||||| ||||| |  ||||||| ||||||| |||||||| |||||||||| |||    
T  13252749 actgaaaaacatgctaagaataacgtaagatgacctgccatcacaaccccaaacttagacagttgcttttcctcaaataacgaaagaaaaacataattta 13252650  T
Q  170 ttctttgca 178  Q
    |||||||||    
T  13252649 ttctttgca 13252641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 4450674 - 4450758
Alignment:
Q  18 aggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatga 102  Q
    |||||||||||| ||||||| ||| ||||| |||||||| |||||||||||||||| |||||||| ||||||||| |||||||||    
T  4450674 aggcaatcgttctaatactcctccattttgttgctaaaacctactgaaaatgactggaaaacatgctaagaataacgtaagatga 4450758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 5236963 - 5236875
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    |||||| ||| |||| ||| ||| |||||||||||||||||| ||||||||||| ||||||||||||| ||||||||| ||||||||||    
T  5236963 cataggaaattgttctaatcctcctcctttttgctgctaaaacctactgaaaataactgaaaaacatgctaagaataacgtaagatgac 5236875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 8977567 - 8977479
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    |||||||| | |||| ||||||| |||||||||||||||||| ||||||||||||| ||||||| ||| ||||||||| ||||||||||    
T  8977567 cataggcagttgttctaatactcctcctttttgctgctaaaacctactgaaaatgattgaaaaagatgctaagaataacgtaagatgac 8977479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 8052525 - 8052439
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatga 102  Q
    ||||||||||| ||| ||||||| || ||||||||||||||| |||||||||||||||| |||||||| ||||||||| |||||||||    
T  8052525 cataggcaatcattctaatactcctcatttttgctgctaaaacctactgaaaatgactg-aaaacatgctaagaataacgtaagatga 8052439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 10611713 - 10611800
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatga 102  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||| | ||||| ||||| ||||||| ||||||||| | |||||||    
T  10611713 cataggcaatcgttctaatactcatcctttttgctgctaaaacctatttaaaatcactgagaaacatgctaagaataacgcaagatga 10611800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 9078979 - 9078890
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactg-aaaaacatgttaagaataatgtaagatgac 103  Q
    ||||| ||||||||| ||||||| |||||||||||||| ||| ||||||||||| |||| ||||||||| ||||||||| ||||||||||    
T  9078979 catagacaatcgttccaatactcctcctttttgctgctgaaacctactgaaaataactgaaaaaacatgctaagaataacgtaagatgac 9078890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 13280759 - 13280847
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    ||||||||||| ||| ||||||| | |||||||||||||||| ||||||||| | | ||||||||||| ||||||||| ||||||||||    
T  13280759 cataggcaatcattctaatactcgttctttttgctgctaaaacctactgaaattaattgaaaaacatgctaagaataacgtaagatgac 13280847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 178
Target Start/End: Original strand, 20577560 - 20577654
Alignment:
Q  84 taagaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcctcaagtaacgaaataaaaacataaattattctttgca 178  Q
    ||||||||| |||||||||| | || ||||||||||  ||||| |  |||||||||||||||||||||||| |||||||||| ||||||| ||||    
T  20577560 taagaataacgtaagatgacatgtcatcacaaccccgaacttagactgttgcttgtcctcaagtaacgaaagaaaaacataatttattctatgca 20577654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 108
Target Start/End: Original strand, 6046527 - 6046620
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatc 108  Q
    ||||||||||  ||| ||||||| ||||||| ||||||| ||  |||||||||||||| |||||||||||||||||||  ||||||||| ||||    
T  6046527 cataggcaataattcaaatactcctccttttagctgctacaacttactgaaaatgactaaaaaacatgttaagaataacataagatgacttatc 6046620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 2565906 - 2565994
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    ||||| ||||||||  ||||||| ||||||||  ||| |||| ||||||||||||||||||||||||| ||||||||  ||||||||||    
T  2565906 catagacaatcgttataatactcctcctttttcttgccaaaacctactgaaaatgactgaaaaacatgctaagaatatcgtaagatgac 2565994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 23173782 - 23173694
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    ||||| |||| |||| ||||||| |||||||||| ||||||| ||| | ||||| ||||||||||||| ||||||||| ||||||||||    
T  23173782 catagacaattgttctaatactcctcctttttgcagctaaaacctattaaaaataactgaaaaacatgctaagaataacgtaagatgac 23173694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 23897268 - 23897328
Alignment:
Q  43 ttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    |||||||| |||||  |||| ||| ||||||||||||||||||||||||||||||||||||    
T  23897268 ttttgctggtaaaacatactaaaattgactgaaaaacatgttaagaataatgtaagatgac 23897328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 3173710 - 3173797
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatga 102  Q
    ||||||||||| ||| ||||||| |||  ||| ||||| ||| ||| ||||||||||||||||||||| ||||||||| | |||||||    
T  3173710 cataggcaatctttctaatactcctcccatttactgctgaaacctaatgaaaatgactgaaaaacatgctaagaataacgcaagatga 3173797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 105
Target Start/End: Original strand, 9767785 - 9767875
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    |||||||||| | || ||||||| ||  |||| ||| ||||| |||||||||||| |||||||||||| ||||||||| || |||||||||    
T  9767785 cataggcaattgatctaatactcctctatttttctggtaaaacctactgaaaatggctgaaaaacatgctaagaataacgtgagatgacct 9767875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 10332448 - 10332492
Alignment:
Q  59 tactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||    
T  10332448 tactgaaaatgactgaaaaacatgctaagaataacgtaagatgac 10332492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 3736365 - 3736428
Alignment:
Q  44 tttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctat 107  Q
    ||||||| ||||| |||||||||  |||| ||||||||| ||||||||| ||||||||||||||    
T  3736365 tttgctggtaaaacctactgaaatagactaaaaaacatgctaagaataacgtaagatgacctat 3736428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 10418557 - 10418644
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatga 102  Q
    |||||||||| | || ||||||| ||  |||||||  ||||| ||||||||||||||| ||||||||||||||| ||| | |||||||    
T  10418557 cataggcaattgctctaatactcctctgttttgctagtaaaacctactgaaaatgactaaaaaacatgttaagagtaacggaagatga 10418644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 105
Target Start/End: Original strand, 2927874 - 2927964
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    |||||| |||| ||| ||||||| || |||||||| |||||  ||||| |||   ||||||||||||| ||||||||| ||||||||||||    
T  2927874 cataggtaatctttctaatactcctcatttttgctactaaatcctactaaaataaactgaaaaacatgctaagaataacgtaagatgacct 2927964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 9288947 - 9288997
Alignment:
Q  52 taaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatga 102  Q
    ||||| ||||||||| |||||||||||||||  ||||||||||||||||||    
T  9288947 taaaacctactgaaattgactgaaaaacatgccaagaataatgtaagatga 9288997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 9298739 - 9298789
Alignment:
Q  52 taaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatga 102  Q
    ||||| ||||||||| |||||||||||||||  ||||||||||||||||||    
T  9298739 taaaacctactgaaattgactgaaaaacatgccaagaataatgtaagatga 9298789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 9722478 - 9722528
Alignment:
Q  52 taaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatga 102  Q
    ||||||||||||||||||| ||||||||||| ||| ||||| |||||||||    
T  9722478 taaaatctactgaaaatgattgaaaaacatgctaataataacgtaagatga 9722528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 14195776 - 14195838
Alignment:
Q  43 ttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    |||||||| ||||| ||||| ||||||||||||||||||| |||||||||  |||||| ||||    
T  14195776 ttttgctggtaaaacctactaaaaatgactgaaaaacatgctaagaataacataagatcacct 14195838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 10414331 - 10414286
Alignment:
Q  60 actgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    ||||||||| || |||||||||| ||||||||||||||||||||||    
T  10414331 actgaaaataaccgaaaaacatgctaagaataatgtaagatgacct 10414286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 9918211 - 9918255
Alignment:
Q  59 tactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    |||||||||||||| |||||||||| |||||||| ||||||||||    
T  9918211 tactgaaaatgactcaaaaacatgtcaagaataacgtaagatgac 9918255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 9926123 - 9926167
Alignment:
Q  59 tactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    |||||||||||||| |||||||||| |||||||| ||||||||||    
T  9926123 tactgaaaatgactcaaaaacatgtcaagaataacgtaagatgac 9926167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 159
Target Start/End: Original strand, 24194472 - 24194560
Alignment:
Q  71 ctgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcctcaagtaacgaaataaaa 159  Q
    |||||||||||| ||| ||||| || | ||||| | || |||||||| || |||||||  ||||||||| |||||||||||||| ||||    
T  24194472 ctgaaaaacatgctaataataacgtcatatgacttgtcatcacaacctcaaacttaaactgttgcttgttctcaagtaacgaaagaaaa 24194560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 3692829 - 3692767
Alignment:
Q  43 ttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    |||||||| ||||| |||| |||||||| ||||||| ||| || |||||| ||||||||||||    
T  3692829 ttttgctggtaaaacctacagaaaatgaatgaaaaatatgctatgaataacgtaagatgacct 3692767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 150
Target Start/End: Original strand, 12865259 - 12865345
Alignment:
Q  64 aaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcctcaagtaac 150  Q
    ||||||| ||||||| ||| | | ||||| |||||||||  | || ||||||||| | ||||||| ||||| |||||||||||||||    
T  12865259 aaaatgattgaaaaatatgctgaaaataacgtaagatgatttgtcatcacaacccaaaacttaaacggttgtttgtcctcaagtaac 12865345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 104
Target Start/End: Complemental strand, 16055298 - 16055264
Alignment:
Q  70 actgaaaaacatgttaagaataatgtaagatgacc 104  Q
    ||||||||||||| |||||||||||||||||||||    
T  16055298 actgaaaaacatgctaagaataatgtaagatgacc 16055264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 101
Target Start/End: Complemental strand, 18468392 - 18468350
Alignment:
Q  59 tactgaaaatgactgaaaaacatgttaagaataatgtaagatg 101  Q
    |||| ||| ||||||||||||||||||||||||| ||||||||    
T  18468392 tactaaaattgactgaaaaacatgttaagaataacgtaagatg 18468350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 97
Target Start/End: Original strand, 20176137 - 20176175
Alignment:
Q  59 tactgaaaatgactgaaaaacatgttaagaataatgtaa 97  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  20176137 tactgaaaatgactggaaaacatgctaagaataatgtaa 20176175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 1810948 - 1810992
Alignment:
Q  59 tactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    |||| ||||||||||||||||||| || |||||| ||||||||||    
T  1810948 tacttaaaatgactgaaaaacatgctacgaataacgtaagatgac 1810992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 86; Significance: 3e-41; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 15 - 176
Target Start/End: Original strand, 20860339 - 20860500
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcaca 114  Q
    |||||||||| |||| ||||||  |||||||||||||||||| ||||||||||| | ||||||||||| ||| | ||| |||||||||||| || |||||    
T  20860339 cataggcaattgttctaatacttctcctttttgctgctaaaacctactgaaaattaatgaaaaacatgctaacagtaacgtaagatgacctgtcatcaca 20860438  T
Q  115 accccagacttaaatggttgcttgtcctcaagtaacgaaataaaaacataaattattctttg 176  Q
    |||||| |||||||  |||||||||||||||||||||||| |||||||||  ||||||||||    
T  20860439 accccaaacttaaactgttgcttgtcctcaagtaacgaaagaaaaacatattttattctttg 20860500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 16 - 219
Target Start/End: Original strand, 19053102 - 19053301
Alignment:
Q  16 ataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaa 115  Q
    ||||||||| |||| ||||||| ||||||||||||  |||||||||||||||| ||||| ||||||| ||||||||| |||| ||||| | || ||||||    
T  19053102 ataggcaattgttctaatactcctcctttttgctgtaaaaatctactgaaaataactgataaacatgctaagaataacgtaaaatgacatgtcatcacaa 19053201  T
Q  116 ccccagacttaaatggttgcttgtcctcaagtaacgaaataaaaacataaattattctttgcannnnnnnncttcaagaaaaacatacctttccgggagt 215  Q
    ||||| ||||| |  ||||||||||||||| |||||||| |||||||||| ||||||||||||         || | |||||||||||||||||||||||    
T  19053202 ccccaaacttagactgttgcttgtcctcaattaacgaaagaaaaacataatttattctttgcattttt----tttaggaaaaacatacctttccgggagt 19053297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 24320617 - 24320470
Alignment:
Q  17 taggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaa-catgttaagaataatgtaagatgacctatcgtcacaa 115  Q
    |||| |||||| | |||||||  ||||||||||||||||| ||||||||||||| | ||||| |||||||||||||| |||||||||||| || || |||    
T  24320617 taggaaatcgtgctaatactccgcctttttgctgctaaaacctactgaaaatgaataaaaaaacatgttaagaataacgtaagatgacctgtcatctcaa 24320518  T
Q  116 ccccagacttaaatggttgcttgtcctcaagtaacgaaataaaaacat 163  Q
    ||||| |||||||| |||||||||||| ||||||||||| ||||||||    
T  24320517 ccccaaacttaaattgttgcttgtccttaagtaacgaaagaaaaacat 24320470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 31 - 176
Target Start/End: Original strand, 34488873 - 34489018
Alignment:
Q  31 aatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagacttaaatg 130  Q
    ||||||||||  |||||||| ||||  ||||| ||||||||||||||||||| ||||||||| ||||||||||||  | ||||||||||| |||||||      
T  34488873 aatactcatctgttttgctggtaaatcctactaaaaatgactgaaaaacatgctaagaataacgtaagatgacctgccatcacaaccccaaacttaaagt 34488972  T
Q  131 gttgcttgtcctcaagtaacgaaataaaaacataaattattctttg 176  Q
    | | |||||||| ||||||| ||| |||||||||||||||||||||    
T  34488973 gattcttgtcctaaagtaactaaacaaaaacataaattattctttg 34489018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 43 - 178
Target Start/End: Complemental strand, 31600144 - 31600008
Alignment:
Q  43 ttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcct 142  Q
    ||||| || ||||| |||| ||||| |||| ||||||||| ||||||||| |||||| ||||| || ||||||||||| ||||||||||||||||||| |    
T  31600144 ttttgttggtaaaacctacggaaaaagacttaaaaacatgctaagaataacgtaagaggacctgtcatcacaaccccaaacttaaatggttgcttgtcat 31600045  T
Q  143 caagtaacgaaa-taaaaacataaattattctttgca 178  Q
    ||||||||||||  |||||||||| ||||||||||||    
T  31600044 caagtaacgaaagaaaaaacataagttattctttgca 31600008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 20548547 - 20548390
Alignment:
Q  18 aggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaacc 117  Q
    |||||||||||| ||||||| ||| ||||| |||||    ||||| |||   ||||||||||||| || |||||| |||||||||||| || ||| ||||    
T  20548547 aggcaatcgttctaatactcctccattttgttgctatttcctactaaaataaactgaaaaacatgctaggaataacgtaagatgacctgtcatcaaaacc 20548448  T
Q  118 ccagacttaaatggttgcttgtcctcaagtaacgaaataaaaacataaattattcttt 175  Q
    ||| ||||| || |||||||||||||||||||||||| |||||||||| |||||||||    
T  20548447 ccaaacttagattgttgcttgtcctcaagtaacgaaagaaaaacataatttattcttt 20548390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 108
Target Start/End: Complemental strand, 23387644 - 23387551
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatc 108  Q
    ||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||| || ||||||  ||||| ||||||||    
T  23387644 cataggcaatcgttctaatactcctcctttttgctgctaaaacctactgaaaatgactgaaaaacatgctacgaataacataagacgacctatc 23387551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 19003862 - 19003777
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagat 100  Q
    ||||| |||| |||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||||||| |||||||    
T  19003862 catagacaattgttctaatactcatcctttttgctgctaaaacctactgaaaataactgaaaaacatgccaagaataacgtaagat 19003777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 160
Target Start/End: Complemental strand, 25572538 - 25572431
Alignment:
Q  52 taaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcctcaagtaacg 151  Q
    ||||| ||||||||| ||||||||||||||| ||||||||| ||| |||||| | || |||||| |||| |||||||| ||||||||| |||||||||||    
T  25572538 taaaacctactgaaattgactgaaaaacatgctaagaataacgtaggatgacttgtcatcacaa-cccaaacttaaattgttgcttgttctcaagtaacg 25572440  T
Q  152 aaataaaaa 160  Q
    ||| |||||    
T  25572439 aaagaaaaa 25572431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 105
Target Start/End: Original strand, 29987956 - 29988047
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttt-tgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    |||| |||||||||| |||||||  |||||| ||||||||||||||||| ||||||||||||||||||| ||| ||||| ||||||||||||    
T  29987956 catatgcaatcgttctaatactccaccttttttgctgctaaaatctactaaaaatgactgaaaaacatgctaaaaataacgtaagatgacct 29988047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 25400829 - 25400745
Alignment:
Q  21 caatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    ||||||||| |||| || |||||||| ||||||||| ||| ||||||||||||||||||||| ||||||||| |||| |||||||    
T  25400829 caatcgttctaatattcctcctttttcctgctaaaacctaatgaaaatgactgaaaaacatgctaagaataacgtaaaatgacct 25400745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 34132086 - 34132174
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    |||||||| |||||| ||||||  |||||||||||||||||| ||| |||||||  |||||||||||| ||||||||| ||||||||||    
T  34132086 cataggcagtcgttctaatacttctcctttttgctgctaaaacctaatgaaaatagctgaaaaacatgctaagaataaagtaagatgac 34132174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 28666492 - 28666579
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatga 102  Q
    |||||||| || ||| ||||||  |||||||||||||||||| ||||||||||||| ||||||||||| |||||||||  ||||||||    
T  28666492 cataggcagtcattctaatacttctcctttttgctgctaaaacctactgaaaatgaatgaaaaacatgataagaataacataagatga 28666579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 24162108 - 24162018
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    ||||||||||  ||| ||||||  ||| |||||||| ||||||||| ||||||||||||||||||||| ||||||||| |||| |||||||    
T  24162108 cataggcaattattctaatacttctccattttgctggtaaaatctattgaaaatgactgaaaaacatgctaagaataacgtaaaatgacct 24162018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 26069249 - 26069334
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagat 100  Q
    |||| ||||| |||| ||||||| ||  || ||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  26069249 cataagcaattgttctaatactcctctgttctgctggtaaaatctactgaaaatgactaaaaaacatgttaagaataacgtaagat 26069334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 160
Target Start/End: Original strand, 26117437 - 26117581
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcaca 114  Q
    |||| ||||| |||| || |||||||  || ||||  ||||| || |||||||||| | ||||||||| |||||||||||||||||||| |  | |||||    
T  26117437 cataagcaattgttctaaaactcatctcttctgcttgtaaaacctgctgaaaatgattaaaaaacatgctaagaataatgtaagatgacatgccatcaca 26117536  T
Q  115 accccagacttaaatggttgcttgtcctcaagtaacgaaataaaaa 160  Q
    |||| | ||||||| |||||||||||| ||||||| |||| |||||    
T  26117537 acccaaaacttaaaaggttgcttgtcc-caagtaaagaaagaaaaa 26117581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 105
Target Start/End: Original strand, 23338892 - 23338981
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    ||||||||||||||| |||| || | |||||| ||||||||| ||| ||||||||| ||||||||||| |||||||||  |||||||||||    
T  23338892 cataggcaatcgttctaata-tcttgcttttttctgctaaaacctaatgaaaatgattgaaaaacatgctaagaataacctaagatgacct 23338981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 64 - 154
Target Start/End: Complemental strand, 32415878 - 32415788
Alignment:
Q  64 aaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcctcaagtaacgaaa 154  Q
    ||||| ||||||||| ||| |||||||||||||||||||| | || ||||||||| | |||||||  |||| |||| ||||||||||||||    
T  32415878 aaaattactgaaaaatatgctaagaataatgtaagatgacatgtcatcacaaccctaaacttaaaccgttgtttgttctcaagtaacgaaa 32415788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 23214905 - 23214832
Alignment:
Q  32 atactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    |||||| ||||||||| ||||||| | || ||||||| ||||||||||||| ||||||||| ||||||||||||    
T  23214905 atactcctcctttttgttgctaaactgtattgaaaataactgaaaaacatgctaagaataacgtaagatgacct 23214832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 24658381 - 24658306
Alignment:
Q  31 aatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaac-atgttaagaataatgtaagatgacct 105  Q
    ||||||| |||||||||||||||||| ||||| ||||||| |||||||| | ||||| ||||| ||||||||||||    
T  24658381 aatactcctcctttttgctgctaaaacctactaaaaatgattgaaaaacaaagttaaaaataacgtaagatgacct 24658306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 25920831 - 25920918
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatga 102  Q
    |||||||||| | || ||||||||||| |||||||| ||||  ||||||||||||||  ||||| ||| ||||||||| |||||||||    
T  25920831 cataggcaattgctctaatactcatccgttttgctggtaaatcctactgaaaatgacaaaaaaatatgctaagaataacgtaagatga 25920918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 17469655 - 17469569
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatg 101  Q
    |||||||||| | || ||||||| ||  |||||||| ||||| || |||||||||| ||||||||||| ||||||||| ||||||||    
T  17469655 cataggcaattgctctaatactcctctgttttgctggtaaaacctgctgaaaatgattgaaaaacatgctaagaataacgtaagatg 17469569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 22797517 - 22797427
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    |||||||||||| || ||||||  |||||||||||  ||||| |||  ||||||||||||||||||||  || ||||| ||||||||||||    
T  22797517 cataggcaatcgctctaatacttctcctttttgctaataaaacctatcgaaaatgactgaaaaacatgcgaataataacgtaagatgacct 22797427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 18832250 - 18832315
Alignment:
Q  43 ttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatc 108  Q
    ||||| || ||||| ||| |||||| |||||||||||||| ||| |||||||||||||||||||||    
T  18832250 ttttgttggtaaaacctattgaaaaagactgaaaaacatgctaaaaataatgtaagatgacctatc 18832315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 178
Target Start/End: Original strand, 24262118 - 24262211
Alignment:
Q  85 aagaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcctcaagtaacgaaataaaaacataaattattctttgca 178  Q
    |||||||| ||||||||||||  | ||||||||||| |||||||   ||| ||||||| ||||||||||| ||||||| |  ||||||||||||    
T  24262118 aagaataacgtaagatgacctgccatcacaaccccaaacttaaactattgtttgtcctaaagtaacgaaagaaaaacacattttattctttgca 24262211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 23110265 - 23110205
Alignment:
Q  43 ttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    |||||||| ||||| |||| || ||||||| ||||||||||||||||||| ||||||||||    
T  23110265 ttttgctgttaaaacctaccgataatgactaaaaaacatgttaagaataacgtaagatgac 23110205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 18939548 - 18939610
Alignment:
Q  43 ttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    |||||||| |||||  |||| || | |||||||||||||||||||||||| ||||||||||||    
T  18939548 ttttgctggtaaaacttacttaataagactgaaaaacatgttaagaataacgtaagatgacct 18939610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 105
Target Start/End: Original strand, 23266853 - 23266906
Alignment:
Q  52 taaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    ||||| ||||||||||||||| |||||||||  || ||||||||||||||||||    
T  23266853 taaaacctactgaaaatgactaaaaaacatgccaaaaataatgtaagatgacct 23266906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 105
Target Start/End: Original strand, 26348479 - 26348532
Alignment:
Q  52 taaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    |||||||||||| |||||||||||||||||  ||||||||| |||| |||||||    
T  26348479 taaaatctactggaaatgactgaaaaacatactaagaataacgtaaaatgacct 26348532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 28254929 - 28254978
Alignment:
Q  53 aaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatga 102  Q
    |||| ||||||||||||||||||||| ||||||||||||| |||| ||||    
T  28254929 aaaaactactgaaaatgactgaaaaatatgttaagaataacgtaacatga 28254978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 15691304 - 15691356
Alignment:
Q  51 ctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    |||||| ||||||||||||||| ||||| ||| ||||||||| ||||||||||    
T  15691304 ctaaaacctactgaaaatgactaaaaaatatgctaagaataacgtaagatgac 15691356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 24142407 - 24142495
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    |||||| |||| ||| ||||||| || |||||| ||||||| |||||| |||   ||||||||||||| |||||||||  |||||||||    
T  24142407 cataggaaatctttctaatactcctcttttttgatgctaaattctactaaaataaactgaaaaacatgctaagaataacataagatgac 24142495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 24263810 - 24263754
Alignment:
Q  52 taaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatc 108  Q
    ||||| ||||| |||  |||||||||||||| ||||||||| |||||||||||||||    
T  24263810 taaaacctactaaaatagactgaaaaacatgctaagaataacgtaagatgacctatc 24263754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 105
Target Start/End: Complemental strand, 19761635 - 19761588
Alignment:
Q  58 ctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    |||||||||||||||||| |||||| ||| ||||| ||||||||||||    
T  19761635 ctactgaaaatgactgaataacatgctaataataacgtaagatgacct 19761588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 20593246 - 20593308
Alignment:
Q  88 aataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcctcaagtaac 150  Q
    |||||||||||||||| |||| ||| ||||| | ||||||||  || ||||||||||||||||    
T  20593246 aataatgtaagatgacttatcatcataacccgaaacttaaattatttcttgtcctcaagtaac 20593308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 102
Target Start/End: Complemental strand, 26148339 - 26148289
Alignment:
Q  52 taaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatga 102  Q
    ||||||||||| ||| ||||| |||||| || |||||||||||||||||||    
T  26148339 taaaatctactaaaattgactaaaaaacttgctaagaataatgtaagatga 26148289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 1e-40; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 15 - 175
Target Start/End: Original strand, 28918188 - 28918348
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcaca 114  Q
    |||||||||| |||| ||||||| |||||||||  ||||||| ||||||||||||||||||||||||| ||||||||| |||| ||||  | || |||||    
T  28918188 cataggcaattgttctaatactcctcctttttgtagctaaaacctactgaaaatgactgaaaaacatgctaagaataacgtaaaatgatttgtcatcaca 28918287  T
Q  115 accccagacttaaatggttgcttgtcctcaagtaacgaaataaaaacataaattattcttt 175  Q
    |||| | |||||||| |||||||||||||||||||||||| |||||||||  |||||||||    
T  28918288 accctaaacttaaattgttgcttgtcctcaagtaacgaaagaaaaacatattttattcttt 28918348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 27907619 - 27907470
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcaca 114  Q
    |||||||||| |||  ||||||  ||||||||| ||||||||  |||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||    
T  27907619 cataggcaatagttttaatacttctcctttttgttgctaaaacttactgaaaatgactgaaaaacatgctaagaataatgtaaggtgacctatcatcaca 27907520  T
Q  115 accccagacttaaatggttgcttgtcctcaagtaacgaaataaaaacata 164  Q
    ||||||   |||||| |||||||||||||||||||| ||| |||||||||    
T  27907519 accccaattttaaattgttgcttgtcctcaagtaacaaaagaaaaacata 27907470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 147
Target Start/End: Complemental strand, 25886288 - 25886156
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcaca 114  Q
    ||||| ||||||||| ||||||| ||||||||  |||||||| ||| |||||||||| |||||||||| ||| ||||| |||||||||||| || |||||    
T  25886288 catagacaatcgttctaatactcttccttttttatgctaaaacctaatgaaaatgacagaaaaacatgataaaaataacgtaagatgacctgtcatcaca 25886189  T
Q  115 accccagacttaaatggttgcttgtcctcaagt 147  Q
    |||||| |||||||| |||||||||||||||||    
T  25886188 accccaaacttaaattgttgcttgtcctcaagt 25886156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 220
Target Start/End: Original strand, 25532236 - 25532437
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcaca 114  Q
    ||||||||||||||| ||||||| |||||||||||||||    ||||| |||   ||||||||||||| ||||||||| |||| ||||| |  | |||||    
T  25532236 cataggcaatcgttctaatactcctcctttttgctgctatttcctactaaaataaactgaaaaacatgctaagaataacgtaaaatgacttgccatcaca 25532335  T
Q  115 accccagacttaaatggttgcttgtcctcaagtaacgaaataaaaacataaattattctttgcannnnnnnncttcaagaaaaacatacctttccgggag 214  Q
    |||||| | |||||| |||||||||||||||||||| | | |||||||||| ||||||||||||         |||| ||||||||||||||| ||||||    
T  25532336 accccaaaattaaattgttgcttgtcctcaagtaacaatagaaaaacataatttattctttgcattttt----ttcaggaaaaacataccttttcgggag 25532431  T
Q  215 ttgtgt 220  Q
    ||||||    
T  25532432 ttgtgt 25532437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 43 - 178
Target Start/End: Complemental strand, 23010112 - 23009978
Alignment:
Q  43 ttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcct 142  Q
    |||||||| ||||| ||| ||||||||||||||||||||| ||||||||| |||||||||| | |  ||| ||||||| |||||||   || ||||||||    
T  23010112 ttttgctggtaaaacctattgaaaatgactgaaaaacatgctaagaataacgtaagatgacttgttatcaaaaccccacacttaaactatttcttgtcct 23010013  T
Q  143 caagtaacgaaataaaaacataaattattctttgca 178  Q
    | |||||||||| |||||||||||||||||||||||    
T  23010012 ctagtaacgaaa-aaaaacataaattattctttgca 23009978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 26313179 - 26313266
Alignment:
Q  16 ataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    |||||| ||||||| ||||||||| |||||||||||||||| ||||||||| ||| | ||||||||| ||||||||||||||||||||    
T  26313179 ataggcgatcgttctaatactcattctttttgctgctaaaacctactgaaattgattaaaaaacatgctaagaataatgtaagatgac 26313266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 165
Target Start/End: Original strand, 20379286 - 20379436
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcaca 114  Q
    ||||| ||||||||| ||||||| ||||||||||| |||    ||||| |||   ||||||||||||  |||||||||  | ||||||||| || |||||    
T  20379286 catagacaatcgttctaatactcctcctttttgctcctatttcctactaaaataaactgaaaaacatcctaagaataacattagatgacctgtcatcaca 20379385  T
Q  115 accccagacttaaatggttgcttgtcctcaagtaacgaaataaaaacataa 165  Q
    |||||| ||||| |  |||||||||||||||||||| ||| ||||||||||    
T  20379386 accccaaacttagactgttgcttgtcctcaagtaaccaaagaaaaacataa 20379436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 72 - 178
Target Start/End: Original strand, 25922662 - 25922768
Alignment:
Q  72 tgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcctcaagtaacgaaataaaaacataaattatt 171  Q
    ||||||||||| ||| ||||| ||||||| |||| || ||||||||||| ||||| |  |||||||||||||| ||||||||| ||||| |||| |||||    
T  25922662 tgaaaaacatgctaaaaataacgtaagataacctgtcatcacaaccccaaacttagactgttgcttgtcctcatgtaacgaaagaaaaatataatttatt 25922761  T
Q  172 ctttgca 178  Q
    |||||||    
T  25922762 ctttgca 25922768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 15 - 112
Target Start/End: Complemental strand, 24086403 - 24086306
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtca 112  Q
    ||||||||||||||| ||||||| |||||||||||||||||  ||||| |||   ||||||||||||| ||||||||| ||||| |||||| ||||||    
T  24086403 cataggcaatcgttctaatactcctcctttttgctgctaaatcctactaaaataaactgaaaaacatgctaagaataacgtaagttgacctgtcgtca 24086306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 17350978 - 17351066
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    ||||| |||| |||| ||||||| || |||||| |||||||| ||||||||||| ||||||||| ||||||||||||| ||||||||||    
T  17350978 catagacaattgttctaatactcctcatttttgttgctaaaacctactgaaaataactgaaaaatatgttaagaataacgtaagatgac 17351066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 17891759 - 17891819
Alignment:
Q  43 ttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  17891759 ttttgctggtaaaacctactgaaaatgactgaaaaacatgttaagaataacgtaagatgac 17891819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 105
Target Start/End: Original strand, 22569054 - 22569144
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    |||||| |||||||| ||||||  || ||||| ||||||||| ||||||||| ||||||||||||||| |||||||||  |||||||||||    
T  22569054 cataggtaatcgttctaatacttctcattttttctgctaaaacctactgaaattgactgaaaaacatggtaagaataacataagatgacct 22569144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 18758301 - 18758386
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagat 100  Q
    ||||||||||||||| ||||||| ||||||||||| |||||| ||||||||||| | | ||||||||| ||| ||||| |||||||    
T  18758301 cataggcaatcgttctaatactcctcctttttgctactaaaacctactgaaaataattaaaaaacatgctaaaaataacgtaagat 18758386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 16157143 - 16157091
Alignment:
Q  53 aaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16157143 aaaacctactgaaaatgactgaaaaacatgctaagaataatgtaagatgacct 16157091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 16257888 - 16257950
Alignment:
Q  43 ttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    |||||||| ||||||||||| |||| ||||||||||||||||||||||||  |||||||||||    
T  16257888 ttttgctggtaaaatctactaaaaacgactgaaaaacatgttaagaataacataagatgacct 16257950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 21905742 - 21905816
Alignment:
Q  31 aatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    ||||||| |||||||| |||||||||  ||| |||||||||||||||||||| |||||||||  |||||||||||    
T  21905742 aatactcctcctttttcctgctaaaacatacagaaaatgactgaaaaacatgctaagaataacataagatgacct 21905816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 35680169 - 35680111
Alignment:
Q  43 ttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatg 101  Q
    |||||||| ||||| ||||||||||||||| ||||||||| ||||||||| ||||||||    
T  35680169 ttttgctggtaaaacctactgaaaatgacttaaaaacatgctaagaataacgtaagatg 35680111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 26651691 - 26651646
Alignment:
Q  58 ctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||    
T  26651691 ctactgaaaatgactcaaaaacatgttaaaaataatgtaagatgac 26651646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 25196611 - 25196699
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    ||||||||||||||  ||||||  || ||||||||||||||  ||||| |||   |||||||||||||||||||||||  |||||||||    
T  25196611 cataggcaatcgttttaatacttctcttttttgctgctaaatcctactaaaataaactgaaaaacatgttaagaataacataagatgac 25196699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 105
Target Start/End: Original strand, 29144634 - 29144725
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgct-gctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    |||||| |||| ||| |||| || ||||||||||| ||||||| ||| ||  ||||||| ||||||||| ||||||||| ||||||||||||    
T  29144634 cataggaaatcattctaatattcctcctttttgcttgctaaaacctattggtaatgactaaaaaacatgctaagaataacgtaagatgacct 29144725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 105
Target Start/End: Original strand, 34574513 - 34574604
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgact-gaaaaacatgttaagaataatgtaagatgacct 105  Q
    |||||||| |||||| ||||||| |||| ||| ||  ||||| ||||||||||| |||  ||||||||| ||||||||| ||||||||||||    
T  34574513 cataggcattcgttctaatactcctcctattttctattaaaacctactgaaaataactaaaaaaacatgctaagaataacgtaagatgacct 34574604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 27540355 - 27540274
Alignment:
Q  22 aatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    |||||||| |||| || || |||||  |||||||| ||||||||||||||||||||| ||| ||||| ||| |||| |||||    
T  27540355 aatcgttctaatattcctcattttttatgctaaaacctactgaaaatgactgaaaaatatgctaagagtaacgtaatatgac 27540274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 164
Target Start/End: Original strand, 32087085 - 32087197
Alignment:
Q  52 taaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcctcaagtaacg 151  Q
    ||||| ||||| |||  |||| ||||| ||| ||| ||||| |||||||||| | || ||||||| | | ||| |||| ||||||||||||||||||||     
T  32087085 taaaacctactaaaatagactaaaaaatatgctaataataacgtaagatgacatgtcatcacaactcgaaactaaaattgttgcttgtcctcaagtaaca 32087184  T
Q  152 aaataaaaacata 164  Q
    | | |||||||||    
T  32087185 atagaaaaacata 32087197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 28930274 - 28930337
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaa 78  Q
    |||||||||| |||| |||| || || ||||||| |||||||  ||||||||||||||||||||    
T  28930274 cataggcaattgttctaatattcctcatttttgcagctaaaacatactgaaaatgactgaaaaa 28930337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 29892228 - 29892278
Alignment:
Q  53 aaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    |||| ||| ||||||| ||||||||| ||||||||||||| ||||||||||    
T  29892228 aaaacctattgaaaataactgaaaaatatgttaagaataacgtaagatgac 29892278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 105
Target Start/End: Original strand, 28766909 - 28766942
Alignment:
Q  72 tgaaaaacatgttaagaataatgtaagatgacct 105  Q
    ||||||||||||||||||||| ||||||||||||    
T  28766909 tgaaaaacatgttaagaataacgtaagatgacct 28766942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 105
Target Start/End: Complemental strand, 32137972 - 32137919
Alignment:
Q  52 taaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    ||||| ||||| ||||||||||| ||||||  ||||||||| ||||||||||||    
T  32137972 taaaacctactaaaaatgactgataaacataataagaataacgtaagatgacct 32137919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 31449891 - 31449851
Alignment:
Q  110 tcacaaccccagacttaaatggttgcttgtcctcaagtaac 150  Q
    ||||||||||| |||||||  ||||||||||||||||||||    
T  31449891 tcacaaccccaaacttaaactgttgcttgtcctcaagtaac 31449851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 23036 - 23239
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcaca 114  Q
    ||||||||||||||| ||||||| ||||||||| |||||| | ||| | ||||| ||||||| ||||| ||||||||   ||||||||||| || |||||    
T  23036 cataggcaatcgttctaatactcctcctttttggtgctaacacctaattaaaataactgaaatacatgctaagaatagcataagatgacctgtcatcaca 23135  T
Q  115 accccagacttaaatggttgcttgtcctcaagtaacgaaataaaaacataaattattctttgcannnnnnnncttcaagaaaaacatacctttccgggag 214  Q
    |||||| ||||| |  |||||||||| ||||||||||||| |||||||||| |||||||||||         | ||||||||||||||||||||||||||    
T  23136 accccaaacttagactgttgcttgtcttcaagtaacgaaagaaaaacataatttattctttgc-ttttttttcatcaagaaaaacatacctttccgggag 23234  T
Q  215 ttgtg 219  Q
    |||||    
T  23235 ttgtg 23239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 3e-38; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 15 - 178
Target Start/End: Complemental strand, 21845826 - 21845662
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaa-catgttaagaataatgtaagatgacctatcgtcac 113  Q
    ||||||||||||||  |||| || |||| ||| || |||||| ||  ||||||||||||||||| |||||||||||||| ||||||||||||| | ||||    
T  21845826 cataggcaatcgttataataatcctcctcttttcttctaaaaacttttgaaaatgactgaaaaaacatgttaagaataacgtaagatgacctaccatcac 21845727  T
Q  114 aaccccagacttaaatggttgcttgtcctcaagtaacgaaataaaaacataaattattctttgca 178  Q
    ||||| | |||||||| |||||||||||||||||||||||| |||||||||  ||||||||||||    
T  21845726 aacccaaaacttaaattgttgcttgtcctcaagtaacgaaagaaaaacatattttattctttgca 21845662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 51 - 178
Target Start/End: Original strand, 26820896 - 26821023
Alignment:
Q  51 ctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcctcaagtaac 150  Q
    |||||| ||| ||||||| ||||||||||||| ||||| ||| |||||||||||| || | ||||||||| |||||||| ||| | ||||||||||||||    
T  26820896 ctaaaacctaatgaaaataactgaaaaacatgctaagagtaacgtaagatgacctgtcattacaaccccaaacttaaattgttccatgtcctcaagtaac 26820995  T
Q  151 gaaataaaaacataaattattctttgca 178  Q
    |||| |||||||||||||||||||||||    
T  26820996 gaaagaaaaacataaattattctttgca 26821023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 108
Target Start/End: Original strand, 24480024 - 24480117
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatc 108  Q
    ||||| ||||||||| ||||||| ||||||||||||| |||| ||||||||||||| ||||| ||||| ||||||||| |||||||||||||||    
T  24480024 catagacaatcgttccaatactcctcctttttgctgccaaaacctactgaaaatgattgaaatacatgctaagaataacgtaagatgacctatc 24480117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 105
Target Start/End: Original strand, 14641632 - 14641722
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    |||||| ||| |||| ||||||| |||||||||||||||||| ||||||||||| ||||||||||||| ||||||||| ||||||| ||||    
T  14641632 cataggtaattgttctaatactcctcctttttgctgctaaaacctactgaaaataactgaaaaacatgctaagaataacgtaagataacct 14641722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 17384025 - 17384123
Alignment:
Q  17 taggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaa 115  Q
    ||||||||| ||  ||||||| |||||||||||||||||| ||| ||||||| ||||||||||||| ||||||||||||||||||| || || ||||||    
T  17384025 taggcaatcattgtaatactcctcctttttgctgctaaaacctaatgaaaataactgaaaaacatgctaagaataatgtaagatgatctgtcatcacaa 17384123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 105
Target Start/End: Original strand, 24469798 - 24469888
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    ||||||||||||||| ||||||| ||||||||||||  |||| ||||||||||||| ||||||||||  ||| ||||| ||||||||||||    
T  24469798 cataggcaatcgttctaatactcctcctttttgctgtcaaaacctactgaaaatgattgaaaaacatactaaaaataacgtaagatgacct 24469888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 17822121 - 17822032
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgact-gaaaaacatgttaagaataatgtaagatgac 103  Q
    ||||||||||||||| ||||||| |||||||||||||||||  ||| ||||||| ||| |||||||||| ||||||||| ||||||||||    
T  17822121 cataggcaatcgttctaatactcctcctttttgctgctaaatcctattgaaaataactagaaaaacatgctaagaataacgtaagatgac 17822032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 19577634 - 19577562
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaag 87  Q
    ||||||||||||||| ||||||| |||||||||||||||||| ||||||||||| ||| ||||||||| ||||    
T  19577634 cataggcaatcgttctaatactcctcctttttgctgctaaaacctactgaaaataactaaaaaacatgctaag 19577562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 22404351 - 22404263
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    ||||| ||||||||  ||||||| |||||||||||||||||| ||||||||| | ||||||||||||| ||||||||| | ||||||||    
T  22404351 catagacaatcgttttaatactcctcctttttgctgctaaaacctactgaaatttactgaaaaacatgataagaataacgaaagatgac 22404263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 178
Target Start/End: Original strand, 22569923 - 22570018
Alignment:
Q  84 taagaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcctcaagtaacgaaa-taaaaacataaattattctttgca 178  Q
    ||||||||| |||||||||||| || ||||||||||| |||||||| |||| |||||||||||||||||||  | |||||||| ||||| ||||||    
T  22569923 taagaataaagtaagatgacctgtcatcacaaccccaaacttaaattgttgtttgtcctcaagtaacgaaagcataaacataagttattatttgca 22570018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 1636635 - 1636720
Alignment:
Q  16 ataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatga 102  Q
    ||||||||| |||| ||||||| |||||||||| ||||||| ||||| ||||| ||||||||||||| ||||||||| |||||||||    
T  1636635 ataggcaattgttctaatactc-tcctttttgccgctaaaacctactaaaaataactgaaaaacatgctaagaataacgtaagatga 1636720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 92
Target Start/End: Original strand, 9848179 - 9848240
Alignment:
Q  31 aatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataa 92  Q
    |||||||||||||||||||  ||||| ||||| |||||||||||||||||||||||||||||    
T  9848179 aatactcatcctttttgctaataaaacctactaaaaatgactgaaaaacatgttaagaataa 9848240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 22564643 - 22564555
Alignment:
Q  18 aggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgaccta 106  Q
    ||||||| | || ||||||| ||  |||||||| ||||| ||||| ||||||||||||||||||| ||||||||| |||||||||||||    
T  22564643 aggcaattgctctaatactcctctgttttgctggtaaaacctactaaaaatgactgaaaaacatgctaagaataacgtaagatgaccta 22564555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 9519732 - 9519819
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatga 102  Q
    |||||||||| | || ||||||| |||||||||||||||||  ||||||||||| ||| ||||||||| ||| ||||| |||||||||    
T  9519732 cataggcaattgctctaatactcctcctttttgctgctaaatactactgaaaataactaaaaaacatgctaaaaataacgtaagatga 9519819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 9841035 - 9841106
Alignment:
Q  31 aatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatga 102  Q
    ||||||| |||||| ||||| ||||| ||||||||||||||| ||| ||||||||||||||| |||||||||    
T  9841035 aatactcctcctttctgctggtaaaacctactgaaaatgactaaaacacatgttaagaataacgtaagatga 9841106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 21760504 - 21760414
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    |||||| |||| ||| |||| || ||||||||||||||||| |||| ||||||||||||||||| ||| |||||||||  |||| ||||||    
T  21760504 cataggaaatcattctaataatcctcctttttgctgctaaattctattgaaaatgactgaaaaatatgctaagaataacttaaggtgacct 21760414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 145
Target Start/End: Original strand, 15551112 - 15551185
Alignment:
Q  72 tgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcctcaa 145  Q
    ||||||| ||||||| ||| | ||||||||||||||| ||||||||||| | |||||| |||||||||||||||    
T  15551112 tgaaaaatatgttaaaaatgacgtaagatgacctatcatcacaaccccaaagttaaattgttgcttgtcctcaa 15551185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 22845947 - 22845862
Alignment:
Q  16 ataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatg 101  Q
    ||||||||| |||| ||||||| ||||||||| || |||||  |||||||||| ||||||||||||| ||||| ||| ||||||||    
T  22845947 ataggcaattgttctaatactcctcctttttgttgttaaaacatactgaaaataactgaaaaacatgctaagagtaacgtaagatg 22845862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 160
Target Start/End: Complemental strand, 19721905 - 19721798
Alignment:
Q  52 taaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcctcaagtaacg 151  Q
    ||||| ||||||||| ||||| |||||||| ||||||||||| ||| ||||||| || ||| ||||||| |||||||  |||| ||||| |||| |||||    
T  19721905 taaaacctactgaaattgact-aaaaacattttaagaataatttaatatgacctgtcatcagaaccccaaacttaaactgttgtttgtcgtcaaataacg 19721807  T
Q  152 aaataaaaa 160  Q
    ||| |||||    
T  19721806 aaagaaaaa 19721798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 105
Target Start/End: Original strand, 14078037 - 14078128
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaa-tgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    |||||||||| | || ||||||| |||| ||||||||||||  |||||||||| | ||| |||| |||| ||||||||||||||||||||||    
T  14078037 cataggcaattgctctaatactcctcctctttgctgctaaatcctactgaaaaataactaaaaaccatgctaagaataatgtaagatgacct 14078128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 14723684 - 14723771
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatga 102  Q
    ||||| ||||| ||| ||||||| ||||||||||| |||||  ||| ||||||| |||||||| |||| ||||||||| |||||||||    
T  14723684 catagacaatcattctaatactcctcctttttgctcctaaatcctattgaaaataactgaaaagcatgctaagaataacgtaagatga 14723771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 14076412 - 14076486
Alignment:
Q  31 aatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    ||||||| |||| ||||||||||||   |||||||||| |||||||| |||| ||||||||| ||||||||||||    
T  14076412 aatactcctcctctttgctgctaaatcatactgaaaataactgaaaaccatgctaagaataacgtaagatgacct 14076486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 27961252 - 27961302
Alignment:
Q  53 aaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    |||| ||||||||||||| ||||||||||||||||||||| ||||||||||    
T  27961252 aaaacctactgaaaatgattgaaaaacatgttaagaataacgtaagatgac 27961302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 108
Target Start/End: Original strand, 11136918 - 11137011
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatc 108  Q
    |||| |||||| ||| |||| || ||||||||||| |||||  ||||| |||   ||||||||||||| |||||||||||||||| ||||||||    
T  11136918 catatgcaatcattctaataatcctcctttttgctactaaatcctactaaaataaactgaaaaacatgctaagaataatgtaagaagacctatc 11137011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 17847780 - 17847857
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataa 92  Q
    ||||| ||||||||| ||||||| || |||||||||||||||  |||| ||||| ||| ||||||||| |||||||||    
T  17847780 catagacaatcgttctaatactcttcatttttgctgctaaaacttacttaaaataactaaaaaacatgctaagaataa 17847857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 21687198 - 21687138
Alignment:
Q  43 ttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    |||||||| ||||| ||||| ||| ||||||||||||||| ||||||||| ||||||||||    
T  21687198 ttttgctggtaaaacctactaaaattgactgaaaaacatgctaagaataacgtaagatgac 21687138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 4340680 - 4340751
Alignment:
Q  31 aatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatga 102  Q
    ||||||| |||||||| ||||||||| |||||||||||  |||||||||||  ||| ||||| |||||||||    
T  4340680 aatactcctcctttttactgctaaaacctactgaaaatatctgaaaaacatactaaaaataacgtaagatga 4340751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 19594073 - 19594010
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaa 78  Q
    |||||||||| |||| ||||||| |||||||||| ||||||| ||||||||||| ||| |||||    
T  19594073 cataggcaattgttctaatactcctcctttttgcagctaaaacctactgaaaataactaaaaaa 19594010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 108
Target Start/End: Original strand, 21036957 - 21037023
Alignment:
Q  42 tttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatc 108  Q
    |||||| |||||||| ||||| ||||| ||||||||||||| ||||||| | ||||||||| |||||    
T  21036957 tttttgttgctaaaacctactaaaaataactgaaaaacatgataagaatgacgtaagatgatctatc 21037023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 9339028 - 9338987
Alignment:
Q  62 tgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    ||||||||||||||||||||||||||||| | ||||||||||    
T  9339028 tgaaaatgactgaaaaacatgttaagaatgacgtaagatgac 9338987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 105
Target Start/End: Original strand, 14727171 - 14727224
Alignment:
Q  52 taaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    ||||| ||||| ||||||||||||||||||| ||| ||||| ||||||||||||    
T  14727171 taaaacctactaaaaatgactgaaaaacatggtaataataacgtaagatgacct 14727224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 21152588 - 21152511
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataa 92  Q
    ||||| ||||||||| ||||||| |||||||||||||| ||  ||||| ||||| | ||||||||||| ||| |||||    
T  21152588 catagacaatcgttctaatactcctcctttttgctgcttaatcctactaaaaataattgaaaaacatgctaaaaataa 21152511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 8066668 - 8066704
Alignment:
Q  31 aatactcatcctttttgctgctaaaatctactgaaaa 67  Q
    ||||||| |||||||||||||||||||||||||||||    
T  8066668 aatactcttcctttttgctgctaaaatctactgaaaa 8066704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 23087158 - 23087114
Alignment:
Q  61 ctgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    |||||||||| ||||||||||  ||||||||||||||||||||||    
T  23087158 ctgaaaatgattgaaaaacatactaagaataatgtaagatgacct 23087114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 149
Target Start/End: Complemental strand, 8322926 - 8322868
Alignment:
Q  91 aatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcctcaagtaa 149  Q
    |||||| || ||||| || ||||||||| | |||||||| |||||||||||||||||||    
T  8322926 aatgtacgaggacctgtcatcacaacccaacacttaaatcgttgcttgtcctcaagtaa 8322868  T

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Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 17379545 - 17379495
Alignment:
Q  17 taggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaa 67  Q
    |||| |||||||| |||||||||||||||||||  ||||| ||||||||||    
T  17379545 tagggaatcgttctaatactcatcctttttgcttataaaacctactgaaaa 17379495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 19246292 - 19246366
Alignment:
Q  31 aatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    ||||||||||  |||||||| ||||| ||||| |||  |||||||||||||| | ||||||| || |||||||||    
T  19246292 aatactcatctattttgctgttaaaacctactaaaatagactgaaaaacatgcttagaataacgttagatgacct 19246366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 112
Target Start/End: Original strand, 3358190 - 3358239
Alignment:
Q  63 gaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtca 112  Q
    |||||||||||||||||||| |||||| ||||||||| ||  ||||||||    
T  3358190 gaaaatgactgaaaaacatgctaagaaaaatgtaagaagatatatcgtca 3358239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 15600483 - 15600422
Alignment:
Q  43 ttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacc 104  Q
    |||||||||||||| | |||  ||| |||||||||||||  || ||||||||||||||||||    
T  15600483 ttttgctgctaaaacccactacaaacgactgaaaaacatactacgaataatgtaagatgacc 15600422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 159
Target Start/End: Original strand, 16167860 - 16167954
Alignment:
Q  61 ctgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcctcaagtaacgaaataaaa 159  Q
    |||||||||||||||||||||    | |||||||||| || || | || |||||| |||| ||||||||   ||||||||||||||||| |||| ||||    
T  16167860 ctgaaaatgactgaaaaacat----aaaataatgtaacataacatgtcatcacaatcccaaacttaaattaatgcttgtcctcaagtaatgaaagaaaa 16167954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 105
Target Start/End: Original strand, 30356300 - 30356353
Alignment:
Q  52 taaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    ||||| ||| ||||||||||| ||||||||||||||||||| | || |||||||    
T  30356300 taaaacctaatgaaaatgactaaaaaacatgttaagaataacgcaaaatgacct 30356353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 2588296 - 2588384
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    ||||| |||| |||| |||||||||| ||| || || ||||| | | ||||||||||||||||| ||| ||| || || ||||||||||    
T  2588296 catagacaattgttctaatactcatcttttatgttggtaaaaccaattgaaaatgactgaaaaatatgctaaaaacaacgtaagatgac 2588384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 105
Target Start/End: Complemental strand, 31878891 - 31878855
Alignment:
Q  69 gactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  31878891 gactgaaaaacatgctaagaataaagtaagatgacct 31878855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 4e-34; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 18827396 - 18827553
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcaca 114  Q
    ||||||||||| ||| |||||||||||||| | ||||||| | ||| | ||||| ||||||||||||||||||||||| |||||||||||  || |||||    
T  18827396 cataggcaatcattctaatactcatcctttctcctgctaagacctaattaaaataactgaaaaacatgttaagaataacgtaagatgaccagtcatcaca 18827495  T
Q  115 accccagacttaaatggttgcttgtcctcaagtaacgaaataaaaacataaattattc 172  Q
    |||| | | ||| || |||| ||||||||||||||||||| |||||||||| ||||||    
T  18827496 accctaaatttagattgttgtttgtcctcaagtaacgaaagaaaaacataatttattc 18827553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 178
Target Start/End: Complemental strand, 25402526 - 25402369
Alignment:
Q  21 caatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaacccca 120  Q
    ||||||||| ||||||| || ||||||||||||||  ||||| |||   ||||||||||||| ||||||||| | |||||||||| || |||||||||||    
T  25402526 caatcgttctaatactcctcttttttgctgctaaatcctactaaaataaactgaaaaacatgctaagaataacgcaagatgacctgtcatcacaacccca 25402427  T
Q  121 gacttaaatggttgcttgtcctcaagtaacgaaataaaaacataaattattctttgca 178  Q
     ||||| || | |||||||||| ||||||||||| |||||||||| ||||||| ||||    
T  25402426 aacttagattgctgcttgtcctaaagtaacgaaagaaaaacataatttattctctgca 25402369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 15542405 - 15542317
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    ||||||||||||||| ||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  15542405 cataggcaatcgttctaatactcctactttttgctgctaaaacctactgaaaatgactgaaaaacatgttaagaataacgtaagatgac 15542317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 12210266 - 12210363
Alignment:
Q  16 ataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcac 113  Q
    |||| ||||| ||| ||||||| |||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  12210266 atagacaatctttctaatactcctcctttttgctgctaaaacctactgaaattgactgaaaaacatgctaagaataatgtaagatgacctatcatcac 12210363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 105
Target Start/End: Original strand, 729136 - 729226
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    ||||| ||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||| |||| ||||||||| ||||||||||||    
T  729136 catagacaatcgttctaatactcctcctttttgctgctaaaacctactgaaaatgactgaaaagcatgctaagaataacgtaagatgacct 729226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 21663187 - 21663097
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    ||||||||||||||| ||||||  ||||||||| || ||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  21663187 cataggcaatcgttctaatacttctcctttttgatgttaaaacctactgaaaatgactgaaaaacatgctaagaataacgtaagatgacct 21663097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 176
Target Start/End: Original strand, 16114816 - 16114961
Alignment:
Q  31 aatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagacttaaatg 130  Q
    ||||||||||  || ||||| |||||  | |||||||||| ||||||||||| ||||||||| ||||||| | || || ||||||||||| | ||||||     
T  16114816 aatactcatctgttatgctggtaaaacatgctgaaaatgattgaaaaacatgctaagaataacgtaagataatctgtcatcacaaccccaaatttaaatt 16114915  T
Q  131 gttgcttgtcctcaagtaacgaaataaaaacataaattattctttg 176  Q
    |||||||||| ||||||||| ||| |||||||||  ||||||||||    
T  16114916 gttgcttgtcttcaagtaacaaaagaaaaacatattttattctttg 16114961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 22624918 - 22624810
Alignment:
Q  70 actgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcctcaagtaacgaaataaaaacataaatta 169  Q
    ||||||||||||| ||||| |||  ||| | ||||| || ||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||||| |||    
T  22624918 actgaaaaacatgctaagactaacataaaaagacctgtcatcacaaccccaaacttaaacggttgcttgtcctcaagtaacaaaagaaaaacataagtta 22624819  T
Q  170 ttctttgca 178  Q
    ||| |||||    
T  22624818 ttcattgca 22624810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 16180718 - 16180799
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaa 97  Q
    |||||||||| |||| ||||||| ||||||||| ||||||| |||||||||||| ||||||||||||| ||||||||||||||    
T  16180718 cataggcaat-gttctaatactcctcctttttgttgctaaactctactgaaaataactgaaaaacatgctaagaataatgtaa 16180799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 105
Target Start/End: Original strand, 21450767 - 21450857
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    ||||||||||| ||| ||||||| |||||||||||||||||| ||||||||||||||||| ||||||| |||  ||||  |||||||||||    
T  21450767 cataggcaatctttccaatactcctcctttttgctgctaaaacctactgaaaatgactgagaaacatgctaaagataacttaagatgacct 21450857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 30 - 100
Target Start/End: Original strand, 27973318 - 27973388
Alignment:
Q  30 gaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagat 100  Q
    |||||||| |||||||||||| ||||| ||||||||||||||||||||||||| ||||||||| |||||||    
T  27973318 gaatactcctcctttttgctgttaaaacctactgaaaatgactgaaaaacatgctaagaataacgtaagat 27973388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 18527593 - 18527505
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    ||||||||||| ||| ||||||| |||||||||| ||||||| ||| ||||||||| ||||||| ||| ||||||||| ||||||||||    
T  18527593 cataggcaatcattctaatactcctcctttttgccgctaaaacctattgaaaatgagtgaaaaagatgctaagaataacgtaagatgac 18527505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 28009747 - 28009834
Alignment:
Q  16 ataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    ||||||||| | || ||| ||| ||||||||||||||||||  ||  |||||||||||||||||||| ||||||||||||||||||||    
T  28009747 ataggcaattgctctaatgctcctcctttttgctgctaaaacttagcgaaaatgactgaaaaacatgctaagaataatgtaagatgac 28009834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 64 - 148
Target Start/End: Complemental strand, 21536954 - 21536870
Alignment:
Q  64 aaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcctcaagta 148  Q
    ||||||||||||||| ||| ||| ||||| |||||||||||||   |||||||| || |||||||| ||||||||||||||||||    
T  21536954 aaaatgactgaaaaatatgctaaaaataacgtaagatgacctacaatcacaacctcaaacttaaattgttgcttgtcctcaagta 21536870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 105
Target Start/End: Original strand, 14782554 - 14782620
Alignment:
Q  39 tcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    |||||||||||||||||| ||| ||||| ||| ||||||||||| ||||||||| ||||||||||||    
T  14782554 tcctttttgctgctaaaacctattgaaattgagtgaaaaacatgctaagaataacgtaagatgacct 14782620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 22507479 - 22507393
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgact-gaaaaacatgttaagaataatgtaagat 100  Q
    ||||||||||||||| ||||||| |||||||||| ||||||| ||| ||||||| |||  ||||||||| ||||||||| |||||||    
T  22507479 cataggcaatcgttctaatactcctcctttttgccgctaaaacctaatgaaaataactaaaaaaacatgctaagaataacgtaagat 22507393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 26611428 - 26611338
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    ||||||||||| ||| ||||||| |||||||||||||||||  ||||| | | | | ||||||||||| ||||||||| ||||||||||||    
T  26611428 cataggcaatcattccaatactcctcctttttgctgctaaatcctactaatattaattgaaaaacatgctaagaataacgtaagatgacct 26611338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 22624616 - 22624704
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    ||||||||||| ||  ||||||| |||||||||||||||||  ||||| |||   ||| ||||||||| ||||||||||||||||||||    
T  22624616 cataggcaatcattttaatactcctcctttttgctgctaaatcctactaaaataaacttaaaaacatgctaagaataatgtaagatgac 22624704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 114
Target Start/End: Complemental strand, 18734682 - 18734583
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcaca 114  Q
    ||||||||||||||| ||||||| |||||||||||| ||||  ||||| ||    ||||||||||||| ||||||||| ||||||| |||| || |||||    
T  18734682 cataggcaatcgttctaatactcctcctttttgctgttaaatcctactaaagtaaactgaaaaacatgctaagaataacgtaagataacctgtcatcaca 18734583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 26647438 - 26647355
Alignment:
Q  31 aatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcaca 114  Q
    ||||||| ||| ||||| || ||||| |||||||||| |||||||||| ||| ||||||||| |||||||||||| || |||||    
T  26647438 aatactcctccgttttgttggtaaaacctactgaaaaagactgaaaaatatgctaagaataacgtaagatgacctgtcatcaca 26647355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 7221554 - 7221604
Alignment:
Q  53 aaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    |||||||  ||||||||||||||||||||||||||||||| ||||||||||    
T  7221554 aaaatcttttgaaaatgactgaaaaacatgttaagaataacgtaagatgac 7221604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 15158869 - 15158803
Alignment:
Q  31 aatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaa 97  Q
    ||||||| |||||||||||||||||  ||||| ||||| ||||||||||||| ||||||||| ||||    
T  15158869 aatactcctcctttttgctgctaaatcctacttaaaataactgaaaaacatgctaagaataacgtaa 15158803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 105
Target Start/End: Original strand, 18832215 - 18832305
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    |||||| |||||||| ||||||| |||||||||||||||| | ||| | ||| | ||||||||||||| |||||| ||  |||||||||||    
T  18832215 cataggtaatcgttctaatactcctcctttttgctgctaagacctaattaaagtaactgaaaaacatgctaagaagaacctaagatgacct 18832305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 22426612 - 22426522
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    ||||||||||||||| ||||||| |||||||||||||||    ||||| |||   ||||||||||||| ||||||| | ||||||||||||    
T  22426612 cataggcaatcgttctaatactcctcctttttgctgctatttcctactaaaataaactgaaaaacatgctaagaatgacgtaagatgacct 22426522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 16817205 - 16817117
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    |||||||||| |||| || |||| |||||||||||||||    ||||| |||   ||||||||||||||||||||||| ||||||||||    
T  16817205 cataggcaatagttctaacactcctcctttttgctgctatttcctactaaaataaactgaaaaacatgttaagaataacgtaagatgac 16817117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 24901237 - 24901297
Alignment:
Q  43 ttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    |||||||| ||||||||||||||||||| ||||||| ||| ||| ||||| ||||||||||    
T  24901237 ttttgctggtaaaatctactgaaaatgattgaaaaatatgctaaaaataacgtaagatgac 24901297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 103
Target Start/End: Complemental strand, 27116304 - 27116232
Alignment:
Q  31 aatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    ||||||||||| ||||  || ||||| ||||| ||||||| |||||||||||||||||| || ||||||||||    
T  27116304 aatactcatccgtttttatggtaaaacctactaaaaatgattgaaaaacatgttaagaaaaacgtaagatgac 27116232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 16363623 - 16363710
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatga 102  Q
    |||||||||| | || ||||||| ||  ||||| || ||||| |||||||||||||||| |||||||| ||| ||||| |||||||||    
T  16363623 cataggcaattgatctaatactcctctattttgttggtaaaaactactgaaaatgactggaaaacatgctaaaaataacgtaagatga 16363710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 103
Target Start/End: Original strand, 27912113 - 27912152
Alignment:
Q  64 aaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  27912113 aaaatgactgaaaaacatgttaagaataacgtaagatgac 27912152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 33192381 - 33192440
Alignment:
Q  44 tttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    ||||||| ||||| ||||||||| ||||||||||||||| ||||||||  ||||||||||    
T  33192381 tttgctggtaaaacctactgaaattgactgaaaaacatgctaagaatagcgtaagatgac 33192440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 9403634 - 9403686
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaa 67  Q
    ||||||||| ||||| ||||||| | |||||||||||||||| ||||||||||    
T  9403634 cataggcaaacgttctaatactccttctttttgctgctaaaacctactgaaaa 9403686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 12011281 - 12011205
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaata 91  Q
    |||||||||| | || ||||||||| | |||||||| ||||| ||||||||||||  ||||||||||| ||| ||||    
T  12011281 cataggcaattgctctaatactcattcgttttgctggtaaaacctactgaaaatgtgtgaaaaacatgctaaaaata 12011205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 21333168 - 21333080
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    ||||||||||||||  ||||||  |||||||| ||||||||| ||| ||||| | | || ||||||| ||||||||||  |||||||||    
T  21333168 cataggcaatcgttttaatacttctcctttttcctgctaaaacctattgaaactaagtgcaaaacatattaagaataacataagatgac 21333080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 25959528 - 25959468
Alignment:
Q  43 ttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    |||||| | ||||| |||||||||| |||||| ||||||  ||||||||||||||||||||    
T  25959528 ttttgccggtaaaacctactgaaaaagactgagaaacatcctaagaataatgtaagatgac 25959468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 102
Target Start/End: Original strand, 26581620 - 26581660
Alignment:
Q  62 tgaaaatgactgaaaaacatgttaagaataatgtaagatga 102  Q
    ||||||| ||||||||||||| |||||||||||||||||||    
T  26581620 tgaaaataactgaaaaacatgctaagaataatgtaagatga 26581660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 102
Target Start/End: Original strand, 44797166 - 44797205
Alignment:
Q  63 gaaaatgactgaaaaacatgttaagaataatgtaagatga 102  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  44797166 gaaaaagactgaaaaacatgctaagaataatgtaagatga 44797205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 103
Target Start/End: Complemental strand, 14235343 - 14235293
Alignment:
Q  53 aaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    |||| ||||| ||||||||||||||||||| ||||| ||| ||||||||||    
T  14235343 aaaacctactaaaaatgactgaaaaacatgctaagagtaacgtaagatgac 14235293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 24464664 - 24464702
Alignment:
Q  65 aaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  24464664 aaatgactgaaaaacatgctaagaataacgtaagatgac 24464702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 22626223 - 22626154
Alignment:
Q  43 ttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtca 112  Q
    |||||||| ||||| ||||| ||||  | | ||||||||| ||||||||| |||||||||||| ||||||    
T  22626223 ttttgctggtaaaagctactaaaaaaaattcaaaaacatgctaagaataacgtaagatgacctgtcgtca 22626154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 102
Target Start/End: Original strand, 9403679 - 9403711
Alignment:
Q  70 actgaaaaacatgttaagaataatgtaagatga 102  Q
    ||||||||||||| |||||||||||||||||||    
T  9403679 actgaaaaacatgctaagaataatgtaagatga 9403711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 15571748 - 15571692
Alignment:
Q  52 taaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatc 108  Q
    ||||| ||||| ||| ||||||||||||||| ||| ||||| ||||||||| |||||    
T  15571748 taaaacctactaaaattgactgaaaaacatgctaaaaataacgtaagatgatctatc 15571692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 17445103 - 17445143
Alignment:
Q  52 taaaatctactgaaaatgactgaaaaacatgttaagaataa 92  Q
    ||||| ||||| ||||| |||||||||||||||||||||||    
T  17445103 taaaacctactaaaaataactgaaaaacatgttaagaataa 17445143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 31260630 - 31260586
Alignment:
Q  110 tcacaaccccagacttaaatggttgcttgtcctcaagtaacgaaa 154  Q
    |||||| |||| | |||||| ||||||||||||||||||||||||    
T  31260630 tcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaa 31260586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 52 - 178
Target Start/End: Complemental strand, 88496 - 88370
Alignment:
Q  52 taaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcctcaagtaacg 151  Q
    ||||| ||||||||||||| ||||||||||| ||||||||| |||||||||| | || ||||||||||| |||||||| |||| |||||||||| |||||    
T  88496 taaaacctactgaaaatgattgaaaaacatgctaagaataacgtaagatgacatgtcatcacaaccccaaacttaaattgttgtttgtcctcaattaacg 88397  T
Q  152 aaataaaaacataaattattctttgca 178  Q
    ||| |||||||||   |||||||||||    
T  88396 aaagaaaaacatattctattctttgca 88370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0871 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0871
Description:

Target: scaffold0871; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 4005 - 4157
Alignment:
Q  62 tgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcctcaagtaacgaaataaaaac 161  Q
    ||||||| ||| ||||||||| ||||||||| |||||| ||||| || || |||||| | ||||| |  |||||||||||||||||||||||| ||||||    
T  4005 tgaaaataacttaaaaacatgctaagaataacgtaagaggacctgtcatctcaaccctaaacttagactgttgcttgtcctcaagtaacgaaagaaaaac 4104  T
Q  162 ataaattattctttgcannnnnnnncttcaagaaaaacatacctttccgggagttgtg 219  Q
    |||| ||||||||||||         |||| |||||||||||||||||||||||||||    
T  4105 ataatttattctttgcatttt-----ttcaggaaaaacatacctttccgggagttgtg 4157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 108
Target Start/End: Original strand, 4824 - 4917
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatc 108  Q
    ||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||| || ||||||  ||||| ||||||||    
T  4824 cataggcaatcgttctaatactcctcctttttgctgctaaaacctactgaaaatgactgaaaaacatgctacgaataacataagacgacctatc 4917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 160
Target Start/End: Original strand, 38329 - 38436
Alignment:
Q  53 aaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcctcaagtaacga 152  Q
    |||| ||||||||||| ||||| ||||||| ||||||||  ||||| |||||| || ||||||||||| |||||||| ||||||||||||||||||||||    
T  38329 aaaacctactgaaaataactgacaaacatgctaagaatagcgtaaggtgacctgtcatcacaaccccaaacttaaattgttgcttgtcctcaagtaacga 38428  T
Q  153 aataaaaa 160  Q
    || |||||    
T  38429 aagaaaaa 38436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 21440 - 21527
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatga 102  Q
    |||| ||||| |||| | |||||||||||||||||||||||| ||||||||| | ||||||||||||  ||||||||  |||||||||    
T  21440 cataagcaattgttctactactcatcctttttgctgctaaaacctactgaaattaactgaaaaacatcgtaagaatatcgtaagatga 21527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 105
Target Start/End: Original strand, 5730 - 5820
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    ||||| |||| |||| ||||||| ||||||||||| |||||  ||||| ||||| ||||||||||||||||| ||||| | ||||||||||    
T  5730 catagacaattgttctaatactcctcctttttgcttctaaatcctactaaaaataactgaaaaacatgttaaaaataacgaaagatgacct 5820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 182608 - 182520
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    ||||||||||||||| ||||||| |||||||||||||||||  ||||| |||   ||||||||||||||||  || ||| |||||||||    
T  182608 cataggcaatcgttctaatactcctcctttttgctgctaaatcctactaaaataaactgaaaaacatgttatcaaaaatataagatgac 182520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 35215 - 35255
Alignment:
Q  52 taaaatctactgaaaatgactgaaaaacatgttaagaataa 92  Q
    ||||| ||| ||||||||||||||||||||| |||||||||    
T  35215 taaaacctattgaaaatgactgaaaaacatgctaagaataa 35255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 192150 - 192212
Alignment:
Q  43 ttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacct 105  Q
    |||||||||||||| ||| |||||||||||||||| |||| ||| ||||| ||||||||||||    
T  192150 ttttgctgctaaaacctattgaaaatgactgaaaaccatgctaaaaataacgtaagatgacct 192212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 95624 - 95690
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacat 81  Q
    ||||||||||||||| ||||||| || ||||||||||||||| | | ||||| ||||||||||||||    
T  95624 cataggcaatcgttctaatactcctcttttttgctgctaaaacccattgaaattgactgaaaaacat 95690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 369298 - 369261
Alignment:
Q  64 aaaatgactgaaaaacatgttaagaataatgtaagatg 101  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  369298 aaaatgactgaaaaacatgctaaaaataatgtaagatg 369261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 100
Target Start/End: Original strand, 6461 - 6538
Alignment:
Q  23 atcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagat 100  Q
    ||||||| ||||||| || |||||| |||||||  ||| ||||||| ||||||||||||| ||||||||| |||||||    
T  6461 atcgttctaatactcctcatttttgttgctaaatcctattgaaaataactgaaaaacatgctaagaataacgtaagat 6538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 20349 - 20261
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    ||||||||||||||| ||||||| |||||||||||||||    ||||| || |  | ||||||||||| ||||||||| ||||||||||    
T  20349 cataggcaatcgttctaatactcctcctttttgctgctatttcctactaaataaaattgaaaaacatgctaagaataacgtaagatgac 20261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 100
Target Start/End: Complemental strand, 36199 - 36143
Alignment:
Q  44 tttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagat 100  Q
    ||||||| ||||| ||| ||||||||||||||||||||| ||||||||| |||||||    
T  36199 tttgctgataaaacctattgaaaatgactgaaaaacatgataagaataacgtaagat 36143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 92924 - 92840
Alignment:
Q  16 ataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagat 100  Q
    ||||||||| | || |||| || || ||||||||||||||  ||||| ||||| ||||||||||||| ||||||||| |||||||    
T  92924 ataggcaatggctctaatattcctcttttttgctgctaaaccctactaaaaataactgaaaaacatgctaagaataacgtaagat 92840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 4940 - 4881
Alignment:
Q  44 tttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagatgac 103  Q
    ||||||| ||||| ||||| ||| ||||||||||||||| ||||||||| ||||||||||    
T  4940 tttgctggtaaaacctactaaaattgactgaaaaacatgctaagaataacgtaagatgac 4881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 41339 - 41416
Alignment:
Q  15 cataggcaatcgttcgaatactcatcctttttgctgctaaaatctactgaaaatgactgaaaaacatgttaagaataa 92  Q
    |||||||||| | || ||||||| ||  |||||||| ||||| ||||| ||||| ||||||||||||| |||||||||    
T  41339 cataggcaattgatctaatactcctctgttttgctggtaaaacctactaaaaataactgaaaaacatgctaagaataa 41416  T

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Target: scaffold0008 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 156
Target Start/End: Original strand, 265943 - 266011
Alignment:
Q  88 aataatgtaagatgacctatcgtcacaaccccagacttaaatggttgcttgtcctcaagtaacgaaata 156  Q
    |||||| ||||||||| | || ||| ||||| |||||||||| |||  |||||||||||||| ||||||    
T  265943 aataatttaagatgacatgtcatcataaccctagacttaaattgtttattgtcctcaagtaatgaaata 266011  T

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