View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17385_low_46 (Length: 265)
Name: NF17385_low_46
Description: NF17385
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17385_low_46 |
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Alignment Details
Target: chr1 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 1665096 - 1665354
Alignment:
| Q |
1 |
cagaatatgaatgcatgtctcccaaaataatgttgttctacatgtatgagctctgcaaatcacttcaacaatgggcaatgaattgaccaatatagagcac |
100 |
Q |
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| T |
1665096 |
cagaatatgaatgcatgtctcccaaaataatgttgttctacatgtatgagctctgcaaatcacttcaacaatgggcaatgaattgaccaatatagagcac |
1665195 |
T |
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| Q |
101 |
ctcaactaacaaacaataaagaaatagatgtaaactactaaaacaagtgccattcataaatccgtcgacaccgtcaaacttagaaattgttagaaaatgg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
1665196 |
ctcaactaacaaacaataaagaaatagatgtaaactactaaaacaagtgccattcataaatccgtcgacactgtcaaacttagaaattgttagaaaatgg |
1665295 |
T |
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| Q |
201 |
gtaagcaaaaactaagtgaaac---------tcataaaattaaggttaaatatgttttt |
250 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
1665296 |
gtaagcaaaaactaagtgaaacatacgaagttcataaaattaaggttaaatatgttttt |
1665354 |
T |
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