View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17385_low_67 (Length: 209)
Name: NF17385_low_67
Description: NF17385
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17385_low_67 |
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Alignment Details
Target: chr4 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 19 - 194
Target Start/End: Complemental strand, 47900436 - 47900261
Alignment:
| Q |
19 |
tgatactggtggtggacatagagcttctgctgaggctattcgtgatgcttttcaaattgaattcggtgatgaatacaaggtactttaatcacacttcctt |
118 |
Q |
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| T |
47900436 |
tgatactggtggtggacatagagcttctgctgaggctattcgtgatgcttttcaaattgaattcggtgatgaatacaaggtactttaatcacacttcctt |
47900337 |
T |
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| Q |
119 |
gtgttttggatctgttgcagcttttgtttcaaactgtgtagattttgttgtgttagagttttctgatctgtatatt |
194 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47900336 |
ctgttttggatctgttgcagcttttgttttaaactgtgtagattttgttgtgttagagttttctgatctgtatatt |
47900261 |
T |
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