View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17385_low_9 (Length: 576)
Name: NF17385_low_9
Description: NF17385
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17385_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 497; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 497; E-Value: 0
Query Start/End: Original strand, 19 - 558
Target Start/End: Original strand, 23133609 - 23134146
Alignment:
| Q |
19 |
atctcggcaccactgtgattacgtcaaactcatcaagattcctaacatacaccaagaaaactgcccaaaaatgaatatatctggcttatagttgaataaa |
118 |
Q |
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| T |
23133609 |
atctcggtaccactgtgattacgtcaaactcatcaagattcctaacatacaccaagaaaactgcacaaaaatgaatatatctggcttataattgaataaa |
23133708 |
T |
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| Q |
119 |
tttgcatgctttactataatataaccttaatatttcatgaagttaggatctatttgaagtcaaatatataacttcagaaaatcttgatgatccatctatt |
218 |
Q |
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| T |
23133709 |
tttgcatgctttactataatataaccttaatatttcatgaagttaggatctatttgaagtcaaatatataacttcagaagatcttgatgatccatctatt |
23133808 |
T |
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| Q |
219 |
ttgtttatcaccttaattatcatttttcatcaaccaaacaaagaaatttgagcaacaattaaacaaacaaaatcaaccatattttgctagcttaccacta |
318 |
Q |
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| T |
23133809 |
ttaattatcaccttaattatcatttttcatcaaccaaaca--gaaatttgagcaacaattaaacaaacaaaatcaaccatattttgctagcttaccacta |
23133906 |
T |
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| Q |
319 |
tagttgttgactatataaatttcaaaaatttcaccatacacatattcatcatagtccatgagaaattattctttgtgaatattccacactcaatagaaat |
418 |
Q |
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| T |
23133907 |
tagttgttgactatataaatttcaaaaatttcaccatacacatattcatcatagtccatgagaaattattctttgtgaatattccacactcaatagaaat |
23134006 |
T |
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| Q |
419 |
ttgtttatgtatgattcaaatccaaatccaattccaaatccaaacaaggtggaaaagatgggtagcactttctcttttgaacaaagaaaaatatatattt |
518 |
Q |
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| T |
23134007 |
ttgtttatgtatgattcaaatccaaatccaattccaaatccaaacaaggtggaaaagatgggaagcactttctcttttgaacaaagaaaaatatatattt |
23134106 |
T |
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| Q |
519 |
gattttgcactatttctaatgaaaaaagctatggggggta |
558 |
Q |
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| T |
23134107 |
gattttgcactattgctaatgaaaaaagctatggggggta |
23134146 |
T |
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