View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17387_high_23 (Length: 319)
Name: NF17387_high_23
Description: NF17387
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17387_high_23 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 13 - 319
Target Start/End: Complemental strand, 32829094 - 32828788
Alignment:
| Q |
13 |
atactagaaatcacggtgagtgtaatgtgggtcatgatttgaaccctgattcaggggtgaggagaagctcgcgggctaggcgtgccccggttttgcttga |
112 |
Q |
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| T |
32829094 |
atactagaaatcacggtgagtgtaatgtgggtcatgatttgaaccctgattcaggggtgaggagaagctcgcgggctaggcgtgccccggttttgcttga |
32828995 |
T |
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| Q |
113 |
tgtctctcccacaccgaagaagaaacggttgaagttaggaaaggatgtagtgccgaagagtgtggagggtgataaaggtgtagggagagaaagtgggggt |
212 |
Q |
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| T |
32828994 |
tgtctctcccacaccgaagaagaaacggttgaagttaggaaaggatgtagttccgaagagtgtggagggtgataaaggtgtagggagagaaagtgggggt |
32828895 |
T |
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| Q |
213 |
tctggtggtgggaattggagtttgaggtcaagatcgaggggtaagaacgtggaatttgaagtgaaggaggagagggaattgagtggtaggaaaaggaagt |
312 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32828894 |
tctggtggtgggaattggagtttgaggtcaagatcgaggggtaagaacgtggaatttgaagtgaaggaggagagggaattgagtggtaggaaaaggaagt |
32828795 |
T |
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| Q |
313 |
tgtttga |
319 |
Q |
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||||||| |
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| T |
32828794 |
tgtttga |
32828788 |
T |
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