View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17387_high_7 (Length: 386)

Name: NF17387_high_7
Description: NF17387
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17387_high_7
NF17387_high_7
[»] chr3 (32 HSPs)
chr3 (1-374)||(25024115-25024488)
chr3 (28-216)||(35537291-35537479)
chr3 (51-216)||(31920780-31920945)
chr3 (51-155)||(31675477-31675581)
chr3 (10-187)||(9510265-9510434)
chr3 (10-187)||(9518240-9518409)
chr3 (51-155)||(19875789-19875893)
chr3 (17-203)||(25388313-25388492)
chr3 (5-159)||(53941803-53941957)
chr3 (51-159)||(55367156-55367264)
chr3 (31-155)||(52250615-52250738)
chr3 (51-176)||(14307754-14307879)
chr3 (51-155)||(40513214-40513318)
chr3 (45-121)||(48930266-48930342)
chr3 (106-180)||(6175943-6176017)
chr3 (63-181)||(44888462-44888580)
chr3 (106-180)||(29310009-29310083)
chr3 (52-121)||(6825369-6825438)
chr3 (10-155)||(12341745-12341890)
chr3 (111-156)||(24926177-24926222)
chr3 (28-149)||(46190015-46190136)
chr3 (133-216)||(15481187-15481270)
chr3 (10-77)||(21740091-21740158)
chr3 (136-207)||(35273718-35273789)
chr3 (111-217)||(21739951-21740057)
chr3 (86-159)||(962649-962722)
chr3 (86-159)||(3141432-3141505)
chr3 (128-165)||(43285378-43285415)
chr3 (86-155)||(48569529-48569598)
chr3 (80-152)||(18381633-18381705)
chr3 (111-159)||(43121160-43121208)
chr3 (10-66)||(43121246-43121302)
[»] chr7 (32 HSPs)
chr7 (7-243)||(23054373-23054602)
chr7 (5-216)||(27218551-27218762)
chr7 (10-207)||(11341299-11341499)
chr7 (35-155)||(19544892-19545012)
chr7 (25-194)||(12308573-12308735)
chr7 (34-208)||(23887613-23887786)
chr7 (34-208)||(23898789-23898962)
chr7 (35-155)||(34104007-34104127)
chr7 (25-159)||(20918480-20918614)
chr7 (68-216)||(39658816-39658965)
chr7 (10-155)||(45993081-45993225)
chr7 (36-216)||(39931025-39931205)
chr7 (68-155)||(8752886-8752973)
chr7 (10-217)||(13553612-13553819)
chr7 (106-180)||(13440654-13440728)
chr7 (51-181)||(17056075-17056205)
chr7 (30-116)||(25018847-25018933)
chr7 (34-155)||(20349493-20349613)
chr7 (5-140)||(17504064-17504199)
chr7 (5-140)||(17549015-17549150)
chr7 (80-158)||(4344393-4344471)
chr7 (112-203)||(5327370-5327461)
chr7 (51-186)||(22819176-22819311)
chr7 (80-159)||(41805244-41805323)
chr7 (101-181)||(2678825-2678904)
chr7 (125-216)||(17856349-17856439)
chr7 (101-216)||(32815744-32815859)
chr7 (101-216)||(33820988-33821103)
chr7 (112-155)||(41340140-41340183)
chr7 (83-149)||(2820219-2820284)
chr7 (63-212)||(23811546-23811695)
chr7 (96-152)||(32482502-32482558)
[»] scaffold0026 (1 HSPs)
scaffold0026 (36-226)||(67611-67801)
[»] chr5 (33 HSPs)
chr5 (52-181)||(29572336-29572465)
chr5 (52-181)||(29573713-29573842)
chr5 (52-181)||(29575090-29575219)
chr5 (52-181)||(29576467-29576596)
chr5 (52-181)||(29577844-29577973)
chr5 (52-181)||(29579221-29579350)
chr5 (38-155)||(380434-380551)
chr5 (68-181)||(23923449-23923561)
chr5 (5-227)||(15862102-15862317)
chr5 (51-155)||(476759-476863)
chr5 (109-216)||(22094679-22094786)
chr5 (28-159)||(26262917-26263048)
chr5 (28-155)||(42259803-42259930)
chr5 (103-159)||(26262362-26262418)
chr5 (36-116)||(41590627-41590707)
chr5 (36-121)||(4297833-4297918)
chr5 (101-166)||(22437812-22437877)
chr5 (106-155)||(31864835-31864884)
chr5 (89-153)||(22174486-22174550)
chr5 (51-95)||(22176376-22176420)
chr5 (13-116)||(36256286-36256389)
chr5 (109-155)||(31864393-31864439)
chr5 (10-155)||(8299672-8299817)
chr5 (63-216)||(35637693-35637845)
chr5 (103-159)||(588105-588161)
chr5 (34-129)||(42039221-42039316)
chr5 (69-155)||(19838181-19838267)
chr5 (69-159)||(26263472-26263562)
chr5 (125-155)||(35122196-35122226)
chr5 (111-216)||(30509476-30509581)
chr5 (111-216)||(30549816-30549921)
chr5 (86-159)||(33170239-33170312)
chr5 (111-159)||(20208206-20208254)
[»] chr2 (24 HSPs)
chr2 (51-216)||(6823957-6824122)
chr2 (110-159)||(22724925-22724974)
chr2 (10-217)||(9668434-9668641)
chr2 (80-159)||(12646096-12646175)
chr2 (26-156)||(20004479-20004610)
chr2 (30-121)||(43310784-43310875)
chr2 (30-155)||(26146740-26146865)
chr2 (109-217)||(11233918-11234026)
chr2 (106-180)||(26894077-26894151)
chr2 (106-180)||(26899516-26899590)
chr2 (10-155)||(14440249-14440394)
chr2 (68-152)||(44028713-44028797)
chr2 (10-75)||(11234049-11234114)
chr2 (37-121)||(10689087-10689170)
chr2 (128-159)||(355372-355403)
chr2 (109-216)||(15018281-15018388)
chr2 (44-155)||(37445632-37445743)
chr2 (109-155)||(25380884-25380930)
chr2 (58-139)||(7301226-7301307)
chr2 (106-155)||(13550718-13550767)
chr2 (106-155)||(13551171-13551220)
chr2 (128-217)||(45717775-45717864)
chr2 (125-181)||(12807615-12807671)
chr2 (111-159)||(36804725-36804773)
[»] chr6 (32 HSPs)
chr6 (5-216)||(19350444-19350655)
chr6 (28-155)||(32186206-32186333)
chr6 (58-216)||(29976437-29976595)
chr6 (9-159)||(25350726-25350876)
chr6 (68-152)||(10919957-10920041)
chr6 (34-151)||(26514253-26514370)
chr6 (10-217)||(13086044-13086251)
chr6 (68-155)||(14843627-14843714)
chr6 (5-121)||(900385-900494)
chr6 (10-155)||(19256145-19256290)
chr6 (10-155)||(33640423-33640567)
chr6 (44-155)||(1104437-1104548)
chr6 (10-216)||(502961-503167)
chr6 (106-180)||(23346932-23347006)
chr6 (51-181)||(29056065-29056195)
chr6 (68-149)||(7956167-7956248)
chr6 (68-141)||(34180487-34180560)
chr6 (36-121)||(10362664-10362749)
chr6 (101-157)||(28575949-28576004)
chr6 (85-180)||(15674409-15674504)
chr6 (106-155)||(14686498-14686547)
chr6 (10-159)||(17078676-17078825)
chr6 (10-155)||(17605824-17605969)
chr6 (68-152)||(18588912-18588996)
chr6 (86-158)||(24573697-24573769)
chr6 (10-77)||(18051017-18051084)
chr6 (68-155)||(34434823-34434910)
chr6 (125-155)||(33805400-33805430)
chr6 (127-156)||(4478613-4478642)
chr6 (28-77)||(11060430-11060479)
chr6 (111-159)||(649559-649607)
chr6 (36-159)||(18682060-18682183)
[»] chr4 (24 HSPs)
chr4 (5-155)||(9690922-9691072)
chr4 (34-207)||(55725144-55725317)
chr4 (69-156)||(2365570-2365657)
chr4 (10-216)||(8935579-8935785)
chr4 (109-216)||(19115040-19115147)
chr4 (109-155)||(19648306-19648352)
chr4 (106-180)||(20675623-20675697)
chr4 (106-180)||(55299213-55299287)
chr4 (28-155)||(55464363-55464490)
chr4 (109-155)||(23657901-23657947)
chr4 (106-180)||(23872941-23873015)
chr4 (70-155)||(2072105-2072190)
chr4 (106-155)||(3129479-3129528)
chr4 (109-146)||(29553239-29553276)
chr4 (57-155)||(38296258-38296356)
chr4 (109-207)||(42952943-42953041)
chr4 (86-159)||(46146258-46146331)
chr4 (26-216)||(7099003-7099193)
chr4 (109-155)||(7662798-7662844)
chr4 (51-181)||(9777916-9778046)
chr4 (125-155)||(26694548-26694578)
chr4 (5-159)||(56336986-56337140)
chr4 (106-155)||(43516238-43516287)
chr4 (112-176)||(12726911-12726975)
[»] scaffold0048 (1 HSPs)
scaffold0048 (68-207)||(63737-63876)
[»] chr1 (25 HSPs)
chr1 (34-201)||(19014428-19014594)
chr1 (51-155)||(28358436-28358540)
chr1 (51-216)||(3544530-3544695)
chr1 (68-216)||(52692034-52692182)
chr1 (69-159)||(27393435-27393525)
chr1 (34-155)||(1248076-1248196)
chr1 (106-180)||(32352775-32352849)
chr1 (26-155)||(25504484-25504613)
chr1 (30-157)||(38070357-38070484)
chr1 (7-150)||(40563053-40563196)
chr1 (51-181)||(22191246-22191376)
chr1 (106-180)||(48072896-48072970)
chr1 (51-155)||(13867323-13867427)
chr1 (57-181)||(21405389-21405513)
chr1 (10-78)||(49264531-49264599)
chr1 (10-77)||(39430782-39430849)
chr1 (63-181)||(3074303-3074421)
chr1 (10-75)||(20796173-20796238)
chr1 (80-155)||(20987730-20987805)
chr1 (80-176)||(33142682-33142778)
chr1 (109-207)||(7396160-7396258)
chr1 (11-61)||(17827806-17827856)
chr1 (136-217)||(20796288-20796369)
chr1 (111-152)||(43943971-43944012)
chr1 (110-155)||(45795880-45795925)
[»] scaffold0189 (1 HSPs)
scaffold0189 (7-149)||(6590-6732)
[»] chr8 (24 HSPs)
chr8 (34-216)||(25193617-25193799)
chr8 (34-155)||(29721400-29721521)
chr8 (34-159)||(12341096-12341221)
chr8 (25-155)||(18187666-18187796)
chr8 (5-159)||(37165607-37165761)
chr8 (63-159)||(36025079-36025175)
chr8 (80-159)||(8902402-8902481)
chr8 (68-155)||(15439680-15439767)
chr8 (68-155)||(15530984-15531071)
chr8 (36-121)||(36492912-36492997)
chr8 (10-77)||(36157659-36157726)
chr8 (109-155)||(4987555-4987601)
chr8 (10-155)||(20824804-20824949)
chr8 (68-155)||(12332411-12332498)
chr8 (105-216)||(16048345-16048456)
chr8 (109-207)||(24794350-24794448)
chr8 (13-116)||(4310371-4310474)
chr8 (130-217)||(25320436-25320523)
chr8 (28-77)||(17659354-17659403)
chr8 (123-156)||(26774736-26774769)
chr8 (108-152)||(7452955-7452999)
chr8 (109-217)||(11393776-11393884)
chr8 (80-176)||(38737472-38737568)
chr8 (10-66)||(45255407-45255463)
[»] scaffold0043 (1 HSPs)
scaffold0043 (51-216)||(34038-34203)
[»] scaffold0113 (1 HSPs)
scaffold0113 (82-176)||(36081-36175)
[»] scaffold0131 (1 HSPs)
scaffold0131 (106-216)||(3985-4095)
[»] scaffold0029 (1 HSPs)
scaffold0029 (106-155)||(134344-134393)
[»] scaffold0002 (2 HSPs)
scaffold0002 (106-155)||(312171-312220)
scaffold0002 (106-155)||(327625-327674)
[»] scaffold0016 (1 HSPs)
scaffold0016 (68-155)||(28337-28424)
[»] scaffold0418 (1 HSPs)
scaffold0418 (109-155)||(8208-8254)
[»] scaffold0061 (1 HSPs)
scaffold0061 (51-121)||(55208-55278)
[»] scaffold0017 (1 HSPs)
scaffold0017 (51-121)||(143356-143426)
[»] scaffold0036 (1 HSPs)
scaffold0036 (138-206)||(3018-3086)


Alignment Details
Target: chr3 (Bit Score: 326; Significance: 0; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 1 - 374
Target Start/End: Complemental strand, 25024488 - 25024115
Alignment:
Q  1 ctagctactccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcct 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||| |    
T  25024488 ctagctactccatctctaatcctatcaacctctctccaccaataagaacaactccgacccccaaccgccaacctccctgcctcctcaccatatctagctt 25024389  T
Q  101 ccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaa 200  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25024388 ccaacaccctataccaaaaaccatctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaa 25024289  T
Q  201 ccctccaagctcctttgtaagacaaattatatcccaattaatccagtgaataaattgatggaacaattaactagtttccaacaattaaaaattaaattta 300  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25024288 ccctccaagctcctttgtaagacaaattgtatcccaattaatccagggaataaattgatggaacaattaactagtttccaacaattaaaaattaaattta 25024189  T
Q  301 aatatcaatggtgtgcataaattcatcacattagaactgggatgtaaatgaatatttatggacgcgaatagtat 374  Q
    ||||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||||||||||||||||||    
T  25024188 aatatcaatggtgtgcataaattgatcaccttagaactgagatgtaaatggatatttatggacgcgaatagtat 25024115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 28 - 216
Target Start/End: Original strand, 35537291 - 35537479
Alignment:
Q  28 acctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctc 127  Q
    ||||| |||||||||||||||  ||||| ||||| |||| |||| |||| ||||||||||||| |  |||   ||||||  |||||||||||||| || |    
T  35537291 acctccctccaccaataagaatcactccggcccccaacctccaatctccttgcctcctcaccacacttagaagccaacaatctataccaaaaacctccac 35537390  T
Q  128 tatccactaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccctccaagctccttt 216  Q
    |||| ||||| |||||||||||||| ||| || | |||||||||||||||||||  ||| ||||||||| ||| ||||||  |||||||    
T  35537391 tatcaactaaaatcctccaacaccacttttctaacagagataaattaaactcccttaacggcctaactctcaatcctccatactccttt 35537479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 51 - 216
Target Start/End: Complemental strand, 31920945 - 31920780
Alignment:
Q  51 actccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacac 150  Q
    ||||| |||||  ||| ||||||||||||||||||||||||||||  || ||| |||||||||||||||||||||||||||||| ||||| | |||||||    
T  31920945 actccggccccctacctccaacctccctgcctcctcaccatatctcaccaccagcaccctataccaaaaaccacctctatccaccaacattcgccaacac 31920846  T
Q  151 cattttccttaaagagataaattaaactcccccaactgcctaactcccaaccctccaagctccttt 216  Q
    ||||| ||| | | ||     |||||||||| |||||| || ||||| |||||||||  |||||||    
T  31920845 catttacctaacaaagcatggttaaactccctcaactgtctcactcctaaccctccatactccttt 31920780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 51 - 155
Target Start/End: Original strand, 31675477 - 31675581
Alignment:
Q  51 actccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacac 150  Q
    ||||| |||||  ||| ||||||||||||||||||||||||||||  || ||| |||||||||||||||||||||||||||||| ||||| | |||||||    
T  31675477 actccggccccctacctccaacctccctgcctcctcaccatatctcaccaccagcaccctataccaaaaaccacctctatccaccaacattcgccaacac 31675576  T
Q  151 cattt 155  Q
    |||||    
T  31675577 cattt 31675581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 9510265 - 9510434
Alignment:
Q  10 ccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccc 109  Q
    ||||||||||||||||| ||||| |||| ||||||| ||| ||||||| | | |||  ||||||||        ||||||||| || ||  |||||||||    
T  9510265 ccatctctaatcctagccacctccctcctccaataataaccactccagtctccaacttccaacctc--------ctcaccataccttgcagccaacaccc 9510356  T
Q  110 tataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcccccaact 187  Q
     ||||||||||||||||||||  |||||||||||||||||||| |||||| | | ||||| ||||||||||| |||||    
T  9510357 gataccaaaaaccacctctattaactaacatcctccaacaccactttcctaacatagatatattaaactccctcaact 9510434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 9518240 - 9518409
Alignment:
Q  10 ccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccc 109  Q
    ||||||||||||||||| ||||| |||| ||||||| ||| ||||||| | | |||  ||||||||        ||||||||| || ||  |||||||||    
T  9518240 ccatctctaatcctagccacctccctcctccaataataaccactccagtctccaacttccaacctc--------ctcaccataccttgcagccaacaccc 9518331  T
Q  110 tataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcccccaact 187  Q
     ||||||||||||||||||||  |||||||||||||||||||| |||||| | | ||||| ||||||||||| |||||    
T  9518332 gataccaaaaaccacctctattaactaacatcctccaacaccactttcctaacatagatatattaaactccctcaact 9518409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 51 - 155
Target Start/End: Original strand, 19875789 - 19875893
Alignment:
Q  51 actccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacac 150  Q
    ||||| ||||| |||| ||||||||| |||||||||||||||||| ||| ||||||||||||||||||| ||||||||||| |  |||| || |||||||    
T  19875789 actccggcccccaacctccaacctccttgcctcctcaccatatctcgccaccaacaccctataccaaaacccacctctatctatcaacaaccgccaacac 19875888  T
Q  151 cattt 155  Q
    |||||    
T  19875889 cattt 19875893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 203
Target Start/End: Complemental strand, 25388492 - 25388313
Alignment:
Q  17 taatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctatacca 116  Q
    |||||||||| ||||| |||||||||||||||| ||||  |||||       ||||||||||||||||| |  ||| |||||  |||||||||||||| |    
T  25388492 taatcctagccacctccctccaccaataagaaccactctggcccc-------caacctccctgcctccttatgatacctagcaaccaacaccctatacaa 25388400  T
Q  117 aaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccc 203  Q
     ||||||| | | || | ||||| ||||||| |||| ||||||  |||||||||||||||||||| ||||||||| || ||||||||    
T  25388399 gaaaccacatttgtcaattaacaacctccaaaaccactttcctagaagagataaattaaactccctcaactgccttacccccaaccc 25388313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 5 - 159
Target Start/End: Original strand, 53941803 - 53941957
Alignment:
Q  5 ctactccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaa 104  Q
    |||||||||| |||||| | || | ||| |||||| || |||||  ||||| |||||  ||| |||||||||| |||||||||||||| |  ||| ||||    
T  53941803 ctactccatccctaatcttcgctatctccctccactaaaaagaatcactccggccccctaccaccaacctcccagcctcctcaccataccgcgccaccaa 53941902  T
Q  105 caccctataccaaaaaccacctctatccactaacatcctccaacaccattttcct 159  Q
    |||| ||||||| || ||  |||||||||| ||||||||||||||||||||||||    
T  53941903 caccttataccagaacccctctctatccaccaacatcctccaacaccattttcct 53941957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 51 - 159
Target Start/End: Original strand, 55367156 - 55367264
Alignment:
Q  51 actccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacac 150  Q
    ||||| |||||  ||| |||||||| ||||||||||||||||||| ||   ||| ||| ||||||| || ||||||||||| ||||||||||||||||||    
T  55367156 actccggccccctacctccaacctctctgcctcctcaccatatctcgctaacaaaaccttataccacaacccacctctatcaactaacatcctccaacac 55367255  T
Q  151 cattttcct 159  Q
    |||||||||    
T  55367256 cattttcct 55367264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 31 - 155
Target Start/End: Complemental strand, 52250738 - 52250615
Alignment:
Q  31 tctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctat 130  Q
    |||| ||||||| |||||| ||||| ||||| |||| ||||||||||  |||||||||||||||| ||| |||||||||||||||| |||| ||| || |    
T  52250738 tctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccataaactacc-ctct 52250640  T
Q  131 ccactaacatcctccaacaccattt 155  Q
    |||| ||||  | ||||||||||||    
T  52250639 ccaccaacaaacgccaacaccattt 52250615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 51 - 176
Target Start/End: Original strand, 14307754 - 14307879
Alignment:
Q  51 actccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacac 150  Q
    ||||| ||||| || | |||| ||||||||||||||||||||||| ||| |||| || ||| |||| || ||  |||||||||| ||||| |||||||||    
T  14307754 actccggcccccaaactccaatctccctgcctcctcaccatatctcgccgccaatactctacaccagaaccccgctctatccacgaacattctccaacac 14307853  T
Q  151 cattttccttaaagagataaattaaa 176  Q
    ||||||||| | | || |||||||||    
T  14307854 cattttcctaacaaagctaaattaaa 14307879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 51 - 155
Target Start/End: Complemental strand, 40513318 - 40513214
Alignment:
Q  51 actccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacac 150  Q
    ||||| ||||| |||| |||||| ||| |||  ||||||||| | |||  |||  ||||||||||| ||||||||||||||||| ||||||| |||||||    
T  40513318 actcctgcccccaacctccaaccgcccagccgtctcaccataccgagctaccaggaccctataccataaaccacctctatccaccaacatccgccaacac 40513219  T
Q  151 cattt 155  Q
    |||||    
T  40513218 cattt 40513214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 121
Target Start/End: Original strand, 48930266 - 48930342
Alignment:
Q  45 agaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaac 121  Q
    ||||| ||||||||||| |||| ||||||||||  |||||||||||||||| ||| |||| ||||||||||| ||||    
T  48930266 agaaccactccagcccccaacctccaacctcccatcctcctcaccatatctcgccaccaaaaccctataccataaac 48930342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 106 - 180
Target Start/End: Complemental strand, 6176017 - 6175943
Alignment:
Q  106 accctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcc 180  Q
    ||||||||||| ||||||||||| ||||| | ||||| |||||||||||||||| | | || |||||||||||||    
T  6176017 accctataccacaaaccacctctgtccaccagcatccgccaacaccattttcctaacaaagctaaattaaactcc 6175943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 63 - 181
Target Start/End: Original strand, 44888462 - 44888580
Alignment:
Q  63 aaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaa 162  Q
    |||| ||||||||||  ||||||||||||| |  ||| |||||||||||||||| | || |||  |||| ||||| | ||||||||||||||| ||| |     
T  44888462 aaccaccaacctcccatcctcctcaccataacgcgccaccaacaccctataccacatactacccttatcaactaataacctccaacaccatttacctaac 44888561  T
Q  163 agagataaattaaactccc 181  Q
    ||||| | |||||||||||    
T  44888562 agagaaacattaaactccc 44888580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 180
Target Start/End: Original strand, 29310009 - 29310083
Alignment:
Q  106 accctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcc 180  Q
    ||||||||||| ||||||||| | ||||| ||||||| |||||||||||||||| | |  | |||||||||||||    
T  29310009 accctataccacaaaccacctttgtccaccaacatccgccaacaccattttcctaacaatgctaaattaaactcc 29310083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 52 - 121
Target Start/End: Original strand, 6825369 - 6825438
Alignment:
Q  52 ctccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaac 121  Q
    |||| ||||| |||||||||||||||  ||||||||||||| |  ||| |||||||||||||||| ||||    
T  6825369 ctccggcccccaaccgccaacctcccatcctcctcaccataccgcgccaccaacaccctataccataaac 6825438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 10 - 155
Target Start/End: Complemental strand, 12341890 - 12341745
Alignment:
Q  10 ccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccc 109  Q
    ||||||||||||||| ||| ||| ||||||||  |||| ||||||| ||||| | || |||| |  ||  ||||| | ||||| ||||||  ||||||||    
T  12341890 ccatctctaatcctaacaatctccctccaccacgaagagcaactccggcccccatcctccaaaccaccatcctccacgccatacctagccaacaacaccc 12341791  T
Q  110 tataccaaaaaccacctctatccactaacatcctccaacaccattt 155  Q
    ||  ||| ||||| || ||||| ||||||| || ||||||||||||    
T  12341790 tactccacaaacctcccctatcaactaacagccgccaacaccattt 12341745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 111 - 156
Target Start/End: Complemental strand, 24926222 - 24926177
Alignment:
Q  111 ataccaaaaaccacctctatccactaacatcctccaacaccatttt 156  Q
    |||||| |||||  ||||||||||||||||||||||||||||||||    
T  24926222 ataccacaaaccttctctatccactaacatcctccaacaccatttt 24926177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 149
Target Start/End: Original strand, 46190015 - 46190136
Alignment:
Q  28 acctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctc 127  Q
    ||||| ||||| |||| ||||  ||||| ||||| |||| |||||| | | |||||||||||||| || ||| |||| ||||| ||||| ||||| |||     
T  46190015 acctccctccatcaattagaaacactccggcccccaacctccaaccgctcagcctcctcaccatacctcgccaccaataccctgtaccacaaacctcctt 46190114  T
Q  128 tatccactaacatcctccaaca 149  Q
    ||||||| |||| || ||||||    
T  46190115 tatccaccaacaaccgccaaca 46190136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 216
Target Start/End: Complemental strand, 15481270 - 15481187
Alignment:
Q  133 actaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccctccaagctccttt 216  Q
    ||||||||||||||||||||||| ||| | | ||  | ||||||||||  ||||| |||||| ||||| |||||| ||||||||    
T  15481270 actaacatcctccaacaccatttacctaataaagcaatattaaactccttcaacttcctaacccccaaacctccatgctccttt 15481187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 10 - 77
Target Start/End: Complemental strand, 21740158 - 21740091
Alignment:
Q  10 ccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccc 77  Q
    ||||||| ||||||  | ||||| ||||||||| |||||||||||| ||||| |||| ||||||||||    
T  21740158 ccatctcgaatcctcccgacctccctccaccaagaagaacaactccggcccccaacctccaacctccc 21740091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 35273718 - 35273789
Alignment:
Q  136 aacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccctcca 207  Q
    |||||| |||||||||| || ||| | ||||| ||||||||||| |||||| | ||||| ||||||||||||    
T  35273718 aacatcttccaacaccacttccctaacagagaaaaattaaactctcccaaccgtctaacccccaaccctcca 35273789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 217
Target Start/End: Complemental strand, 21740057 - 21739951
Alignment:
Q  111 ataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccctccaagc 210  Q
    |||||| |||||  ||||||| || |||||||||||||||||||| ||| | | ||  ||||||||||||| |||   ||| || ||||||||||||  |    
T  21740057 ataccataaacctactctatctaccaacatcctccaacaccatttacctaacaaagcaaaattaaactccctcaatctccttacccccaaccctccagac 21739958  T
Q  211 tcctttg 217  Q
    |||||||    
T  21739957 tcctttg 21739951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 159
Target Start/End: Complemental strand, 962722 - 962649
Alignment:
Q  86 caccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattttcct 159  Q
    ||||||| |||||| | |||||||||  ||| || ||| |||| || ||||||| |||||||||||||||||||    
T  962722 caccatacctagccactaacaccctacgccacaacccatctctctctactaacaacctccaacaccattttcct 962649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 3141432 - 3141505
Alignment:
Q  86 caccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattttcct 159  Q
    ||||||| |||||| | |||||||||  ||| || ||| |||| || ||||||| |||||||||||||||||||    
T  3141432 caccatacctagccactaacaccctacgccacaacccatctctctctactaacaacctccaacaccattttcct 3141505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 165
Target Start/End: Complemental strand, 43285415 - 43285378
Alignment:
Q  128 tatccactaacatcctccaacaccattttccttaaaga 165  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  43285415 tatccactaacatcctccaacaccatttccctaaaaga 43285378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 155
Target Start/End: Complemental strand, 48569598 - 48569529
Alignment:
Q  86 caccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattt 155  Q
    ||||||| |||||| |||||||||||  ||| || ||| ||||||| ||||||| || ||||||||||||    
T  48569598 caccatacctagccaccaacaccctacgccacaacccatctctatcaactaacaaccgccaacaccattt 48569529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 80 - 152
Target Start/End: Original strand, 18381633 - 18381705
Alignment:
Q  80 cctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacacca 152  Q
    |||| ||||||||||| ||| |||| |||| |||||| || || |||||||| || ||||| |||||||||||    
T  18381633 cctcgtcaccatatctcgccaccaaaacccaataccataaccctcctctatcaaccaacattctccaacacca 18381705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 43121208 - 43121160
Alignment:
Q  111 ataccaaaaaccacctctatccactaacatcctccaacaccattttcct 159  Q
    ||||||||||||||  ||||| || | ||||||||||||||||||||||    
T  43121208 ataccaaaaaccactcctatcaacaagcatcctccaacaccattttcct 43121160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 43121302 - 43121246
Alignment:
Q  10 ccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaacc 66  Q
    ||||| |||||||| || ||||| ||||||||| |||||||||||| ||||| ||||    
T  43121302 ccatccctaatcctcgccacctccctccaccaagaagaacaactccggcccccaacc 43121246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 119; Significance: 1e-60; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 7 - 243
Target Start/End: Complemental strand, 23054602 - 23054373
Alignment:
Q  7 actccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaaca 106  Q
    |||||||||||||||||||| ||||||||||||| |||||||  ||||| |||||       ||||||||||||||||||||||| ||||||| ||||||    
T  23054602 actccatctctaatcctagccacctctctccacctataagaaacactccggcccc-------caacctccctgcctcctcaccatgtctagccgccaaca 23054510  T
Q  107 ccctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccctcc 206  Q
    ||||||||||||| || |||||||| |||||||||||| |||||||||||||| |||||||||||| ||||||| ||||||| ||||| | |||||||||    
T  23054509 ccctataccaaaaccctcctctatcaactaacatcctctaacaccattttcctaaaagagataaataaaactcctccaactgtctaaccctcaaccctcc 23054410  T
Q  207 aagctcctttgtaagacaaattatatcccaattaatc 243  Q
    |  ||||||| ||||||||| | | ||||||||||||    
T  23054409 agactcctttctaagacaaactgtttcccaattaatc 23054373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 5 - 216
Target Start/End: Complemental strand, 27218762 - 27218551
Alignment:
Q  5 ctactccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaa 104  Q
    |||||||||| |||||| | || |||||  |||||||| | ||   ||||| ||||| ||||||||||||||||||||||||||||||||| ||| ||||    
T  27218762 ctactccatccctaatcttcgctacctccttccaccaagatgatacactccggcccccaaccgccaacctccctgcctcctcaccatatctcgccaccaa 27218663  T
Q  105 caccctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccct 204  Q
    ||||||||||||||| ||||||||||| |  |||| || |||||||||||| ||| | | || ||||||||| | || ||||||||| || |||| ||||    
T  27218662 caccctataccaaaatccacctctatctatcaacaaccgccaacaccatttacctaacaaagctaaattaaatttccgcaactgcctcacccccagccct 27218563  T
Q  205 ccaagctccttt 216  Q
    |||| |||||||    
T  27218562 ccaaactccttt 27218551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 10 - 207
Target Start/End: Original strand, 11341299 - 11341499
Alignment:
Q  10 ccatctctaatcctagcaacctct--ctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacac 107  Q
    ||||||||||||||||| ||||||  ||||||||| | |||||||||| |||||  ||| ||||||||||||||||||||||||| |||||  |||||||    
T  11341299 ccatctctaatcctagccacctctctctccaccaaaaggaacaactccggcccccgacctccaacctccctgcctcctcaccatacctagcagccaacac 11341398  T
Q  108 cctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagat-aaattaaactcccccaactgcctaactcccaaccctcc 206  Q
    |||||||||||| ||   |||||  || |||||||||||||||||||||||| | | || | ||||||||||||| |||| || |||| ||||| |||||    
T  11341399 cctataccaaaatccctatctataaaccaacatcctccaacaccattttcctaacatagctaaaattaaactccctcaaccgcgtaacccccaaacctcc 11341498  T
Q  207 a 207  Q
    |    
T  11341499 a 11341499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 35 - 155
Target Start/End: Complemental strand, 19545012 - 19544892
Alignment:
Q  35 tccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccac 134  Q
    |||||||  |||||| ||||| ||||| |||| |||||||| ||||||||||||||||||  | | ||||||||||||||||||| ||| ||||||||||    
T  19545012 tccaccacaaagaaccactccggcccccaacctccaacctctctgcctcctcaccatatcgtgtcgccaacaccctataccaaaacccatctctatccac 19544913  T
Q  135 taacatcctccaacaccattt 155  Q
     ||||||| ||||||||||||    
T  19544912 caacatccgccaacaccattt 19544892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 25 - 194
Target Start/End: Complemental strand, 12308735 - 12308573
Alignment:
Q  25 gcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccac 124  Q
    |||||||| |||||||||||||||| ||||| |||||       |||||||| ||||||||||||||| || ||  |||||||||||||||||||| | |    
T  12308735 gcaacctccctccaccaataagaaccactccggcccc-------caacctccatgcctcctcaccataccttgcagccaacaccctataccaaaaatctc 12308643  T
Q  125 ctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaac 194  Q
      ||||| |||| ||||||||||||||| |||||  | ||||| ||| |||||| || ||||||||||||    
T  12308642 tcctatcaactagcatcctccaacaccactttcccaacagagacaaaataaactacctcaactgcctaac 12308573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 34 - 208
Target Start/End: Original strand, 23887613 - 23887786
Alignment:
Q  34 ctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatcca 133  Q
    ||||||||| |||||  |||||  |||| |||| ||||||||| |||||||||||| || ||  || |||| ||||||||||| ||  ||||||| || |    
T  23887613 ctccaccaagaagaaacactccgacccccaacctccaacctcc-tgcctcctcaccgtacctcaccgccaaaaccctataccagaactcacctctgtcta 23887711  T
Q  134 ctaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccctccaa 208  Q
    | | |||||||||||||||||||||| | | || || ||||||||||| |||||| || || |||||||||||||    
T  23887712 ccagcatcctccaacaccattttcctaacaaagctatattaaactccctcaactgtctgacccccaaccctccaa 23887786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 34 - 208
Target Start/End: Original strand, 23898789 - 23898962
Alignment:
Q  34 ctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatcca 133  Q
    ||||||||| |||||  |||||  |||| |||| ||||||||| |||||||||||| || ||  || |||| ||||||||||| ||  ||||||| || |    
T  23898789 ctccaccaagaagaaacactccgacccccaacctccaacctcc-tgcctcctcaccgtacctcaccgccaaaaccctataccagaactcacctctgtcta 23898887  T
Q  134 ctaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccctccaa 208  Q
    | | |||||||||||||||||||||| | | || || ||||||||||| |||||| || || |||||||||||||    
T  23898888 ccagcatcctccaacaccattttcctaacaaagctatattaaactccctcaactgtctgacccccaaccctccaa 23898962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 35 - 155
Target Start/End: Original strand, 34104007 - 34104127
Alignment:
Q  35 tccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccac 134  Q
    |||||||| |||||| ||||||||||| | || ||||||||| |||||||||||| || |  ||| ||||||||||||||||||| ||  || ||||||     
T  34104007 tccaccaacaagaaccactccagcccccatcctccaacctccttgcctcctcaccgtaacgcgccaccaacaccctataccaaaacccctctttatccat 34104106  T
Q  135 taacatcctccaacaccattt 155  Q
     ||||||||||| ||||||||    
T  34104107 caacatcctccagcaccattt 34104127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 25 - 159
Target Start/End: Original strand, 20918480 - 20918614
Alignment:
Q  25 gcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccac 124  Q
    |||||||| ||||||||  |||||| |||||  |||| ||| | |||||||||||||| ||||||||| | ||   | | |||||||||||| ||||| |    
T  20918480 gcaacctccctccaccacaaagaaccactccgacccccaactggcaacctccctgccttctcaccataacgagttactagcaccctataccacaaacctc 20918579  T
Q  125 ctctatccactaacatcctccaacaccattttcct 159  Q
    ||||||| ||||||| |||| ||||||||||||||    
T  20918580 ctctatctactaacaacctcgaacaccattttcct 20918614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 68 - 216
Target Start/End: Complemental strand, 39658965 - 39658816
Alignment:
Q  68 ccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacc-tctatccactaacatcctccaacaccattttccttaaagag 166  Q
    |||||||||| |||||||||||||| |  ||| |||||||||||||| | || || || ||||||||| |||||||||||||||||||| ||| | | ||    
T  39658965 ccaacctcccagcctcctcaccataccgcgccaccaacaccctatactagaaccccccctctatccaccaacatcctccaacaccatttccctaataaag 39658866  T
Q  167 ataaattaaactcccccaactgcctaactcccaaccctccaagctccttt 216  Q
       ||||||| ||||  |||||||| || ||||| ||||||| |||||||    
T  39658865 cacaattaaattcccttaactgcctcacccccaatcctccaaactccttt 39658816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 155
Target Start/End: Original strand, 45993081 - 45993225
Alignment:
Q  10 ccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccc 109  Q
    ||||| ||||||||  | ||||| | ||||||| |||||||||||| ||||||| || ||||||||||   | |||| ||||| |  ||  | || || |    
T  45993081 ccatccctaatcctccccacctcccgccaccaagaagaacaactccggccccaa-cctccaacctcccacacacctcgccataacgggcgactaaaactc 45993179  T
Q  110 tataccaaaaaccacctctatccactaacatcctccaacaccattt 155  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  45993180 tataccaaaaaccacccctatccactaacatcctccaacaccattt 45993225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 36 - 216
Target Start/End: Complemental strand, 39931205 - 39931025
Alignment:
Q  36 ccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccact 135  Q
    ||||||| |||||||||||| ||||| | || |||||| |||  ||||| ||||||| |||||| ||||||||||| |||| ||| || | |  ||||||    
T  39931205 ccaccaacaagaacaactccggcccccatcctccaaccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccact 39931106  T
Q  136 aacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccctccaagctccttt 216  Q
    ||||  | |||||||||||| ||| | ||||  | ||||| ||||| ||||  |||||| ||||||||||||  |||||||    
T  39931105 aacaaacgccaacaccatttacctaacagagcaatattaagctccctcaacctcctaacccccaaccctccatactccttt 39931025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 68 - 155
Target Start/End: Complemental strand, 8752973 - 8752886
Alignment:
Q  68 ccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattt 155  Q
    |||||||||| ||||||||||||||||| ||| ||| |||||||||||| |  || ||||||||||| ||||||||||| ||| ||||    
T  8752973 ccaacctcccagcctcctcaccatatctcgccaccagcaccctataccacatccctcctctatccaccaacatcctccagcactattt 8752886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 217
Target Start/End: Complemental strand, 13553819 - 13553612
Alignment:
Q  10 ccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccc 109  Q
    ||||||||||||||  | ||||| |||||||||| ||||||||||| ||||| |||| ||||||||||| |  |||| ||||| |  ||  | |  || |    
T  13553819 ccatctctaatcctccccacctccctccaccaatgagaacaactccggcccccaacctccaacctccctccaacctcgccataacgggcgactagaacac 13553720  T
Q  110 tataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccctccaag 209  Q
    ||||||| || ||  ||||||| || ||||||||||||||||||||  || | | ||  ||||||||||||| ||||  |||||| |||||||| |||      
T  13553719 tataccacaaccctactctatctaccaacatcctccaacaccatttatctaacaaagcaaaattaaactccctcaacctcctaacccccaaccccccaga 13553620  T
Q  210 ctcctttg 217  Q
    ||||||||    
T  13553619 ctcctttg 13553612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 180
Target Start/End: Original strand, 13440654 - 13440728
Alignment:
Q  106 accctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcc 180  Q
    |||| |||||| ||||||||||||||||| ||||||| |||||||||||||||| | | || |||||||||||||    
T  13440654 acccgataccacaaaccacctctatccaccaacatccgccaacaccattttcctaacaaagctaaattaaactcc 13440728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 181
Target Start/End: Original strand, 17056075 - 17056205
Alignment:
Q  51 actccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacac 150  Q
    ||||| ||||| |||| ||||||||||  ||||||||||||| |  ||| |||||||||||||||| | || |||  |||| ||||| | ||||||||||    
T  17056075 actccggcccccaaccaccaacctcccatcctcctcaccataacgcgccaccaacaccctataccacatactacccttatcaactaataacctccaacac 17056174  T
Q  151 cattttccttaaagagataaattaaactccc 181  Q
    ||||| ||| | ||||| | |||||||||||    
T  17056175 catttacctaacagagaaacattaaactccc 17056205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 116
Target Start/End: Complemental strand, 25018933 - 25018847
Alignment:
Q  30 ctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctatacca 116  Q
    ||||| ||||||| |||||| ||| |  |||| |||| |||||||||| ||||||||||||||||| ||| ||||||||||||||||    
T  25018933 ctctcgccaccaagaagaaccacttcgacccccaacctccaacctcccagcctcctcaccatatcttgccaccaacaccctatacca 25018847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 34 - 155
Target Start/End: Original strand, 20349493 - 20349613
Alignment:
Q  34 ctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatcca 133  Q
    |||||||||  ||||| ||||| ||||| | || ||||||||||||||||||||||||| | |||| |||||||||||||||| || |   ||||||| |    
T  20349493 ctccaccaaagagaaccactcctgccccta-cctccaacctccctgcctcctcaccataccgagccaccaacaccctataccataacctttctctatcta 20349591  T
Q  134 ctaacatcctccaacaccattt 155  Q
    | |||||| |||| ||||||||    
T  20349592 ccaacatcatccagcaccattt 20349613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 17504199 - 17504064
Alignment:
Q  5 ctactccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaa 104  Q
    |||| |||||||||||| |   ||||||  |||||||  |||||| ||||| ||||| | || ||||||||||  |||||||||| ||||| ||| ||||    
T  17504199 ctaccccatctctaatcttcataacctccttccaccacaaagaaccactccggcccccatcctccaacctcccatcctcctcaccgtatctcgccaccaa 17504100  T
Q  105 caccctataccaaaaaccacctctatccactaacat 140  Q
    ||| | |||||||| |||| ||||||| ||||||||    
T  17504099 cactcgataccaaagaccatctctatcaactaacat 17504064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 17549015 - 17549150
Alignment:
Q  5 ctactccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaa 104  Q
    |||| |||||||||||| |   ||||||  |||||||  |||||| ||||| ||||| | || ||||||||||  |||||||||| ||||| ||| ||||    
T  17549015 ctaccccatctctaatcttcataacctccttccaccacaaagaaccactccggcccccatcctccaacctcccatcctcctcaccgtatctcgccaccaa 17549114  T
Q  105 caccctataccaaaaaccacctctatccactaacat 140  Q
    ||| | |||||||| |||| ||||||| ||||||||    
T  17549115 cactcgataccaaagaccatctctatcaactaacat 17549150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 80 - 158
Target Start/End: Original strand, 4344393 - 4344471
Alignment:
Q  80 cctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattttcc 158  Q
    ||||||||||||| | |||| | |||||||||||||| ||||||  ||||||  ||| |||||||||||||||||||||    
T  4344393 cctcctcaccataacgagccactaacaccctataccataaaccatttctatcatctagcatcctccaacaccattttcc 4344471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 112 - 203
Target Start/End: Original strand, 5327370 - 5327461
Alignment:
Q  112 taccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccc 203  Q
    ||||| |||||  ||||||||||||||||||||||||||||||| |||   | ||  | ||||||||||  ||||| |||||||||||||||    
T  5327370 taccataaaccttctctatccactaacatcctccaacaccatttccctagtaaagcaagattaaactccttcaacttcctaactcccaaccc 5327461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 186
Target Start/End: Complemental strand, 22819311 - 22819176
Alignment:
Q  51 actccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacac 150  Q
    ||||| ||||| ||||||||||||||   ||||||||||||| |  ||  |||||||||||||||| | || |||  |||| ||||| | ||||||||||    
T  22819311 actccggcccccaaccgccaacctcctgtcctcctcaccataacgcgctaccaacaccctataccacatactacccttatcgactaataacctccaacac 22819212  T
Q  151 cattttccttaaagagataaattaaactcccccaac 186  Q
    || || ||| | ||||| | ||||||||||| ||||    
T  22819211 cacttgcctaacagagaaacattaaactccctcaac 22819176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 159
Target Start/End: Complemental strand, 41805323 - 41805244
Alignment:
Q  80 cctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattttcct 159  Q
    |||||||||||||||| ||| ||||||||||||||||||||| ||  || ||||| || |  | ||||||||||||||||    
T  41805323 cctcctcaccatatctcgccaccaacaccctataccaaaaactactcctctccaccaataaacgccaacaccattttcct 41805244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 181
Target Start/End: Complemental strand, 2678904 - 2678825
Alignment:
Q  101 ccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactccc 181  Q
    |||||||| ||||||| || || ||||||||||| |||||| || |||||||||||||| | | ||| |||||||||||||    
T  2678904 ccaacaccatataccataaccc-cctctatccaccaacatcgtcaaacaccattttcctaacaaagaaaaattaaactccc 2678825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 125 - 216
Target Start/End: Original strand, 17856349 - 17856439
Alignment:
Q  125 ctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccctccaagctccttt 216  Q
    ||||||||||||||||||||||||||||||| |||   |  | || ||||||||||  ||||| ||| || ||||||||||||| |||||||    
T  17856349 ctctatccactaacatcctccaacaccatttccctagcaatgctacattaaactccttcaacttcctgac-cccaaccctccaaactccttt 17856439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 101 - 216
Target Start/End: Complemental strand, 32815859 - 32815744
Alignment:
Q  101 ccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaa 200  Q
    ||||||||||  |||| || || ||||||||| | | ||||||||||||||||||| || ||||||  | ||||||||||| || | |  |||| |||||    
T  32815859 ccaacaccctgaaccacaacccccctctatccgccatcatcctccaacaccatttttctaaaagagcaatattaaactccctcatccggttaacccccaa 32815760  T
Q  201 ccctccaagctccttt 216  Q
    ||| |||| |||||||    
T  32815759 cccaccaaactccttt 32815744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 101 - 216
Target Start/End: Complemental strand, 33821103 - 33820988
Alignment:
Q  101 ccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaa 200  Q
    |||| ||||||||||| || ||| |||| || || | ||||||||||||||||||| || | | || || ||||||||||  ||| || || || |||||    
T  33821103 ccaaaaccctataccagaacccatctctgtctaccagcatcctccaacaccatttttctaataaagctatattaaactccatcaagtgtctgacccccaa 33821004  T
Q  201 ccctccaagctccttt 216  Q
    |||||||| |||||||    
T  33821003 ccctccaaactccttt 33820988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 112 - 155
Target Start/End: Original strand, 41340140 - 41340183
Alignment:
Q  112 taccaaaaaccacctctatccactaacatcctccaacaccattt 155  Q
    ||||| |||||  |||||||||||||||||||||||||||||||    
T  41340140 taccacaaaccttctctatccactaacatcctccaacaccattt 41340183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 149
Target Start/End: Complemental strand, 2820284 - 2820219
Alignment:
Q  83 cctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaaca 149  Q
    |||||||||| | ||  ||||||||||||||||| ||||| |||||||||| |||||||| ||||||    
T  2820284 cctcaccataacaagattccaacaccctataccacaaacc-cctctatccagtaacatccgccaaca 2820219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 212
Target Start/End: Original strand, 23811546 - 23811695
Alignment:
Q  63 aaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaa 162  Q
    |||| ||||| |||||||||||||||| || | |||  |||||| ||||||||| ||||| | | | || ||||||| |||||| ||||||||  || |     
T  23811546 aaccaccaacttccctgcctcctcaccgtaacgagctaccaacaacctataccacaaacctcatatgtctactaacaacctccagcaccatttatctaac 23811645  T
Q  163 agagataaattaaactcccccaactgcctaactcccaaccctccaagctc 212  Q
    | ||| |  |||||||| | || |||||||||||  ||||| ||||||||    
T  23811646 aaagaaatgttaaactctctcatctgcctaactcataacccgccaagctc 23811695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 32482558 - 32482502
Alignment:
Q  96 agcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacacca 152  Q
    |||| |||||||||||| ||| |||||  || |||| ||||||||||||||||||||    
T  32482558 agccaccaacaccctattccacaaaccctctatatctactaacatcctccaacacca 32482502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 36 - 226
Target Start/End: Original strand, 67611 - 67801
Alignment:
Q  36 ccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccact 135  Q
    ||||||| |||||| ||||||||||| |||| ||||||||||||||||||||||||| ||||    |||||||||||||||||| || ||||| || | |    
T  67611 ccaccaagaagaaccactccagcccccaacctccaacctccctgcctcctcaccatacctagaaatcaacaccctataccaaaaccctcctctgtcaatt 67710  T
Q  136 aacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccctccaagctcctttgtaagacaaa 226  Q
    |||| |||||||||| | | ||||  ||| | ||||||||||||    ||||||||||| ||||| ||||||  |||||||| ||||||||    
T  67711 aacaacctccaacactactatcctagaagggctaaattaaactcatttaactgcctaacccccaaacctccatcctcctttgaaagacaaa 67801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 4e-29; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 52 - 181
Target Start/End: Complemental strand, 29572465 - 29572336
Alignment:
Q  52 ctccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacacc 151  Q
    |||| ||||| |||| |||||||| |||||||||||||||| |||||  |||||||||| |||||||| |||| ||| || ||||||||| ||||||| |    
T  29572465 ctccggcccccaacctccaacctctctgcctcctcaccatacctagcagccaacaccctttaccaaaacccacatctgtcaactaacatcttccaacatc 29572366  T
Q  152 attttccttaaagagataaattaaactccc 181  Q
    |||| ||| |||||||||||||||||||||    
T  29572365 atttccctaaaagagataaattaaactccc 29572336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 52 - 181
Target Start/End: Complemental strand, 29573842 - 29573713
Alignment:
Q  52 ctccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacacc 151  Q
    |||| ||||| |||| |||||||| |||||||||||||||| |||||  |||||||||| |||||||| |||| ||| || ||||||||| ||||||| |    
T  29573842 ctccggcccccaacctccaacctctctgcctcctcaccatacctagcagccaacaccctttaccaaaacccacatctgtcaactaacatcttccaacatc 29573743  T
Q  152 attttccttaaagagataaattaaactccc 181  Q
    |||| ||| |||||||||||||||||||||    
T  29573742 atttccctaaaagagataaattaaactccc 29573713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 52 - 181
Target Start/End: Complemental strand, 29575219 - 29575090
Alignment:
Q  52 ctccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacacc 151  Q
    |||| ||||| |||| |||||||| |||||||||||||||| |||||  |||||||||| |||||||| |||| ||| || ||||||||| ||||||| |    
T  29575219 ctccggcccccaacctccaacctctctgcctcctcaccatacctagcagccaacaccctttaccaaaacccacatctgtcaactaacatcttccaacatc 29575120  T
Q  152 attttccttaaagagataaattaaactccc 181  Q
    |||| ||| |||||||||||||||||||||    
T  29575119 atttccctaaaagagataaattaaactccc 29575090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 52 - 181
Target Start/End: Complemental strand, 29576596 - 29576467
Alignment:
Q  52 ctccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacacc 151  Q
    |||| ||||| |||| |||||||| |||||||||||||||| |||||  |||||||||| |||||||| |||| ||| || ||||||||| ||||||| |    
T  29576596 ctccggcccccaacctccaacctctctgcctcctcaccatacctagcagccaacaccctttaccaaaacccacatctgtcaactaacatcttccaacatc 29576497  T
Q  152 attttccttaaagagataaattaaactccc 181  Q
    |||| ||| |||||||||||||||||||||    
T  29576496 atttccctaaaagagataaattaaactccc 29576467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 52 - 181
Target Start/End: Complemental strand, 29577973 - 29577844
Alignment:
Q  52 ctccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacacc 151  Q
    |||| ||||| |||| |||||||| |||||||||||||||| |||||  |||||||||| |||||||| |||| ||| || ||||||||| ||||||| |    
T  29577973 ctccggcccccaacctccaacctctctgcctcctcaccatacctagcagccaacaccctttaccaaaacccacatctgtcaactaacatcttccaacatc 29577874  T
Q  152 attttccttaaagagataaattaaactccc 181  Q
    |||| ||| |||||||||||||||||||||    
T  29577873 atttccctaaaagagataaattaaactccc 29577844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 52 - 181
Target Start/End: Complemental strand, 29579350 - 29579221
Alignment:
Q  52 ctccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacacc 151  Q
    |||| ||||| |||| |||||||| |||||||||||||||| |||||  |||||||||| |||||||| |||| ||| || ||||||||| ||||||| |    
T  29579350 ctccggcccccaacctccaacctctctgcctcctcaccatacctagcagccaacaccctttaccaaaacccacatctgtcaactaacatcttccaacatc 29579251  T
Q  152 attttccttaaagagataaattaaactccc 181  Q
    |||| ||| |||||||||||||||||||||    
T  29579250 atttccctaaaagagataaattaaactccc 29579221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 38 - 155
Target Start/End: Original strand, 380434 - 380551
Alignment:
Q  38 accaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaa 137  Q
    ||||| |||||| ||||| ||||| |||| ||||||||||||||||||||||||| |  || |||| |||||||||||| |||||| |||||||||| ||    
T  380434 accaagaagaaccactccggcccccaacctccaacctccctgcctcctcaccataccgcgcttccagcaccctataccagaaaccatctctatccaccaa 380533  T
Q  138 catcctccaacaccattt 155  Q
    ||||| ||||||||||||    
T  380534 catccgccaacaccattt 380551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 68 - 181
Target Start/End: Original strand, 23923449 - 23923561
Alignment:
Q  68 ccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagaga 167  Q
    |||||||| |||||||||||||||| |||||  |||||||| |||||||||| |||||||| || |||||||||||||| |||||||| ||| ||| |||    
T  23923449 ccaacctctctgcctcctcaccatacctagcagccaacacc-tataccaaaacccacctctgtcaactaacatcctccatcaccatttccctaaaaaaga 23923547  T
Q  168 taaattaaactccc 181  Q
    ||||||||||||||    
T  23923548 taaattaaactccc 23923561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 5 - 227
Target Start/End: Complemental strand, 15862317 - 15862102
Alignment:
Q  5 ctactccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaa 104  Q
    |||| ||||||||||||||||| ||||| ||||||||||| ||||||||||| |||| |||| |||||| ||| ||||| |||||||| |||||   |||    
T  15862317 ctacaccatctctaatcctagccacctccctccaccaatacgaacaactccatcccccaacctccaaccgcccagcctcttcaccatacctagcaatcaa 15862218  T
Q  105 caccctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccct 204  Q
    ||||||||||||||| ||| |||| |       || |||||||||||| || ||| | | ||||||||| ||||||| ||||| | |||| || ||  ||    
T  15862217 caccctataccaaaacccatctctgt-------caacctccaacaccacttccctaataaagataaattgaactccctcaacttcataacccctaaatct 15862125  T
Q  205 ccaagctcctttgtaagacaaat 227  Q
    |||  ||||||| ||||||||||    
T  15862124 ccattctcctttctaagacaaat 15862102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 51 - 155
Target Start/End: Original strand, 476759 - 476863
Alignment:
Q  51 actccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacac 150  Q
    ||||| |||||  ||| |||||||||||||||||||||||||||| ||  ||| ||||||||||||||||||| ||||||| || ||||| | |||||||    
T  476759 actccggccccctacctccaacctccctgcctcctcaccatatctcgctaccagcaccctataccaaaaaccatctctatctaccaacattcgccaacac 476858  T
Q  151 cattt 155  Q
    |||||    
T  476859 cattt 476863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 109 - 216
Target Start/End: Complemental strand, 22094786 - 22094679
Alignment:
Q  109 ctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccctccaa 208  Q
    ||||||||||||||||| |||||||||||||||||||||||||| || |||   | ||  | ||||||||||  |||||| ||||| || ||||||||||    
T  22094786 ctataccaaaaaccacccctatccactaacatcctccaacaccacttccctagtaaagcaatattaaactccttcaactgtctaacccctaaccctccaa 22094687  T
Q  209 gctccttt 216  Q
     |||||||    
T  22094686 actccttt 22094679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 28 - 159
Target Start/End: Complemental strand, 26263048 - 26262917
Alignment:
Q  28 acctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctc 127  Q
    ||||| ||||||||| |||| | ||||| ||||| | || ||||||| ||  ||||||||||||| | |||  | |||||||||||| |||||||  |||    
T  26263048 acctccctccaccaaaaagacccactccggcccccacccaccaaccttccatcctcctcaccataacgagcaactaacaccctatacaaaaaacctactc 26262949  T
Q  128 tatccactaacatcctccaacaccattttcct 159  Q
    |||  ||||||||||||||| |||||||||||    
T  26262948 tatttactaacatcctccaataccattttcct 26262917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 28 - 155
Target Start/End: Original strand, 42259803 - 42259930
Alignment:
Q  28 acctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctc 127  Q
    ||||| ||||||||| |||||  ||||| || || |||| |||| ||||| ||| |||||| ||||||  || | |||||| |||||||||| |||||||    
T  42259803 acctccctccaccaagaagaagcactccggctcccaacctccaaactcccagccacctcacgatatctctccacaaacaccttataccaaaacccacctc 42259902  T
Q  128 tatccactaacatcctccaacaccattt 155  Q
    ||||||| |||||||  |||||||||||    
T  42259903 tatccaccaacatccgtcaacaccattt 42259930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 103 - 159
Target Start/End: Complemental strand, 26262418 - 26262362
Alignment:
Q  103 aacaccctataccaaaaaccacctctatccactaacatcctccaacaccattttcct 159  Q
    ||||||||||||||||||||  ||||||  |||||||||||||||||||||||||||    
T  26262418 aacaccctataccaaaaacctactctatttactaacatcctccaacaccattttcct 26262362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 36 - 116
Target Start/End: Original strand, 41590627 - 41590707
Alignment:
Q  36 ccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctatacca 116  Q
    ||||||| ||||||  |||| ||||| |||||||||||||||  ||||||||||||| || ||| ||||||||||||||||    
T  41590627 ccaccaagaagaacctctccggcccccaaccgccaacctcccatcctcctcaccatacctcgccaccaacaccctatacca 41590707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 121
Target Start/End: Complemental strand, 4297918 - 4297833
Alignment:
Q  36 ccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaac 121  Q
    ||||||| ||||||  |||| | ||| |||||||||||||||  ||||||||||||| || ||| |||||||||||||||| ||||    
T  4297918 ccaccaagaagaacctctccgggccccaaccgccaacctcccatcctcctcaccatacctcgccaccaacaccctataccataaac 4297833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 166
Target Start/End: Original strand, 22437812 - 22437877
Alignment:
Q  101 ccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagag 166  Q
    |||||||||||||||| |||||| ||||||| |||||||||||||| | |||||| ||| ||||||    
T  22437812 ccaacaccctataccacaaaccatctctatctactaacatcctccagccccatttacctaaaagag 22437877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 31864835 - 31864884
Alignment:
Q  106 accctataccaaaaaccacctctatccactaacatcctccaacaccattt 155  Q
    ||||||||||| || || ||||||||||||||||||||||||||||||||    
T  31864835 accctataccataagcctcctctatccactaacatcctccaacaccattt 31864884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 89 - 153
Target Start/End: Complemental strand, 22174550 - 22174486
Alignment:
Q  89 catatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccat 153  Q
    ||||||| ||| ||||||| |||||||| || |||||||||||||| |||| |||||||||||||    
T  22174550 catatctcgccaccaacactctataccataacccacctctatccaccaacaacctccaacaccat 22174486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 51 - 95
Target Start/End: Complemental strand, 22176420 - 22176376
Alignment:
Q  51 actccagccccaaaccgccaacctccctgcctcctcaccatatct 95  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||    
T  22176420 actccggcccccaaccgccaacctccctgcctcctcaccatatct 22176376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 13 - 116
Target Start/End: Original strand, 36256286 - 36256389
Alignment:
Q  13 tctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctat 112  Q
    |||||||||||| |||||||| |||||||| |||||| ||||| ||||| | || ||||||||||  ||    ||||||||||| |  ||||||||||||    
T  36256286 tctctaatcctaccaacctctttccaccaaaaagaaccactccggcccccatcctccaacctcccatccctaacaccatatctaacaaccaacaccctat 36256385  T
Q  113 acca 116  Q
    ||||    
T  36256386 acca 36256389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 155
Target Start/End: Original strand, 31864393 - 31864439
Alignment:
Q  109 ctataccaaaaaccacctctatccactaacatcctccaacaccattt 155  Q
    |||||||| || || ||||||||||||||||||||||||||||||||    
T  31864393 ctataccataagcctcctctatccactaacatcctccaacaccattt 31864439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 10 - 155
Target Start/End: Complemental strand, 8299817 - 8299672
Alignment:
Q  10 ccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccc 109  Q
    |||||| |||||||  ||| ||| ||||||||  |||||||||||| ||||| | || |||| |  ||  ||||| | ||||| ||||||  ||||||||    
T  8299817 ccatctttaatcctcacaatctccctccaccacaaagaacaactccggcccccatcctccaaaccaccatcctccacgccatacctagccaacaacaccc 8299718  T
Q  110 tataccaaaaaccacctctatccactaacatcctccaacaccattt 155  Q
    ||  ||| ||||| || ||||| ||||||| |||||||||||||||    
T  8299717 tactccacaaacctcccctatcaactaacagcctccaacaccattt 8299672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 63 - 216
Target Start/End: Original strand, 35637693 - 35637845
Alignment:
Q  63 aaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaa 162  Q
    |||| ||||| || |||||||||| ||||| || ||  |||||||| | ||||| ||||| |||||||| || |||| |||||||||||| |||||| |     
T  35637693 aacctccaacttcactgcctcctcgccatacctcgcaaccaacaccttgtaccataaacctcctctatcaaccaacaacctccaacaccactttcctaat 35637792  T
Q  163 agagataaattaaactcccccaactgcctaactcccaaccctccaagctccttt 216  Q
    |  |  ||||| ||||||| ||| ||||| || ||||| |||||| ||||||||    
T  35637793 aatgcaaaatttaactccctcaattgcctcac-cccaaacctccatgctccttt 35637845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 159
Target Start/End: Original strand, 588105 - 588161
Alignment:
Q  103 aacaccctataccaaaaaccacctctatccactaacatcctccaacaccattttcct 159  Q
    |||||||||||||| ||||||| |||||| || | ||||||||||||||| ||||||    
T  588105 aacaccctataccataaaccacatctatcaaccagcatcctccaacaccactttcct 588161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 129
Target Start/End: Complemental strand, 42039316 - 42039221
Alignment:
Q  34 ctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctcta 129  Q
    ||||||||| || ||  ||||| ||||| | || |||||| |||  || ||||||||||| | ||| ||||||||||||||||||| |||||||||    
T  42039316 ctccaccaagaaaaagcactccggcccccatcctccaaccgcccaaccacctcaccatatttcgccaccaacaccctataccaaaacccacctcta 42039221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 155
Target Start/End: Original strand, 19838181 - 19838267
Alignment:
Q  69 caacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattt 155  Q
    |||||||||||| |||||| |||| | |||   ||||||| ||||||| ||||| ||| |||| |||||||||||||  ||||||||    
T  19838181 caacctccctgcatcctcatcataacgagctaacaacaccttataccacaaacctcctttatctactaacatcctcctgcaccattt 19838267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 26263562 - 26263472
Alignment:
Q  69 caacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattttcct 159  Q
    |||||| ||| ||||||||||||| | |||  | |||||||||||| |||||||    ||||  |||||||| ||||||||||||||||||    
T  26263562 caaccttccttcctcctcaccataacgagcaactaacaccctatacgaaaaacctatcctatttactaacattctccaacaccattttcct 26263472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 155
Target Start/End: Complemental strand, 35122226 - 35122196
Alignment:
Q  125 ctctatccactaacatcctccaacaccattt 155  Q
    |||||||||||||||||||||||||||||||    
T  35122226 ctctatccactaacatcctccaacaccattt 35122196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 216
Target Start/End: Complemental strand, 30509581 - 30509476
Alignment:
Q  111 ataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccctccaagc 210  Q
    |||||| || ||| ||||||| ||||||| ||||||||||||||| |||   | || || |||||| |||  ||||| |||||| ||||||||||| | |    
T  30509581 ataccacaagccatctctatctactaacaacctccaacaccatttccctagcaaagctacattaaattccttcaacttcctaacccccaaccctcctaac 30509482  T
Q  211 tccttt 216  Q
    ||||||    
T  30509481 tccttt 30509476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 216
Target Start/End: Complemental strand, 30549921 - 30549816
Alignment:
Q  111 ataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccctccaagc 210  Q
    |||||| || ||| ||||||| ||||||| ||||||||||||||| |||   | || || |||||| |||  ||||| |||||| ||||||||||| | |    
T  30549921 ataccacaagccatctctatctactaacaacctccaacaccatttccctagcaaagctacattaaattccttcaacttcctaacccccaaccctcctaac 30549822  T
Q  211 tccttt 216  Q
    ||||||    
T  30549821 tccttt 30549816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 33170239 - 33170312
Alignment:
Q  86 caccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattttcct 159  Q
    ||||||| |||||| | |||||||||  ||| || ||| |||| || ||||||| |||||||||||||||||||    
T  33170239 caccatacctagccactaacaccctacgccacaacccatctctctctactaacaacctccaacaccattttcct 33170312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 20208254 - 20208206
Alignment:
Q  111 ataccaaaaaccacctctatccactaacatcctccaacaccattttcct 159  Q
    ||||||||||||||  ||||| |||| ||||||||||||||| ||||||    
T  20208254 ataccaaaaaccactcctatctactagcatcctccaacaccactttcct 20208206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 4e-29; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 51 - 216
Target Start/End: Original strand, 6823957 - 6824122
Alignment:
Q  51 actccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacac 150  Q
    ||||| ||||| |||| |||||||||||||||||||| ||||||| ||| |||| ||||||||||| || ||  |||||||||| ||||| |||||||||    
T  6823957 actccggcccccaacctccaacctccctgcctcctcaacatatctcgccgccaaaaccctataccagaaccccgctctatccaccaacattctccaacac 6824056  T
Q  151 cattttccttaaagagataaattaaactcccccaactgcctaactcccaaccctccaagctccttt 216  Q
    ||||| | | | |  | |||||||||||||  ||||||||| |||||||||||| || ||||||||    
T  6824057 catttgcttaataaggctaaattaaactccttcaactgcctcactcccaacccttcatgctccttt 6824122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 22724974 - 22724925
Alignment:
Q  110 tataccaaaaaccacctctatccactaacatcctccaacaccattttcct 159  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  22724974 tataccaaaaaccacccctatccactaacatcctccaacaccattttcct 22724925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 217
Target Start/End: Complemental strand, 9668641 - 9668434
Alignment:
Q  10 ccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccc 109  Q
    ||||||||||||||  | ||||| |||||||||||||||||||||| ||||| |||| ||||||||||| |  |||| ||||| |  ||  | |  || |    
T  9668641 ccatctctaatcctccccacctccctccaccaataagaacaactccggcccccaacctccaacctccctccaacctcgccataacgggcgactagaacac 9668542  T
Q  110 tataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccctccaag 209  Q
    ||||||| || ||  ||||||| || ||||||||||||||| |||| ||| | | ||  || |||||||||| ||||  |||||| ||||||||| ||      
T  9668541 tataccacaaccctactctatctaccaacatcctccaacactatttacctaacaaagcaaagttaaactccctcaacctcctaacccccaacccttcaga 9668442  T
Q  210 ctcctttg 217  Q
    ||||||||    
T  9668441 ctcctttg 9668434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 80 - 159
Target Start/End: Original strand, 12646096 - 12646175
Alignment:
Q  80 cctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattttcct 159  Q
    ||||| |||| || |||||| |||||||||||||||| || ||| ||||||| ||||||| |||||||||||||||||||    
T  12646096 cctccacaccttacctagccaccaacaccctataccacaatccatctctatctactaacaacctccaacaccattttcct 12646175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 26 - 156
Target Start/End: Original strand, 20004479 - 20004610
Alignment:
Q  26 caacctctctccaccaataagaacaactccagccccaaa-ccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccac 124  Q
    ||||||| | ||||||  ||||||||||||| ||||  | || ||||||||||| | |||||||| || | |||| |||| ||||||||||| ||| | |    
T  20004479 caacctcccaccaccacgaagaacaactccaaccccccatcctccaacctccctacatcctcaccgtaaccagccaccaataccctataccacaaatctc 20004578  T
Q  125 ctctatccactaacatcctccaacaccatttt 156  Q
    | ||||| ||||||||||||||||||||||||    
T  20004579 ccctatcaactaacatcctccaacaccatttt 20004610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 43310784 - 43310875
Alignment:
Q  30 ctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaac 121  Q
    ||||| ||||||| |||||| ||||| ||||| |||| ||||||||||  ||||||| |||||||| ||| |||||||||||||||| ||||    
T  43310784 ctctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcgccatatctcgccaccaacaccctataccacaaac 43310875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 30 - 155
Target Start/End: Original strand, 26146740 - 26146865
Alignment:
Q  30 ctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctcta 129  Q
    ||||| ||||||| || ||| ||||| ||||| |||| ||||||||||  ||||||| |||||||| ||| |||||||||||||||| |||| ||  ||     
T  26146740 ctctcgccaccaagaataaccactccggcccccaacctccaacctcccatcctcctcgccatatctcgccaccaacaccctataccacaaactactcctc 26146839  T
Q  130 tccactaacatcctccaacaccattt 155  Q
    ||||| ||||  | ||||||||||||    
T  26146840 tccaccaacaaacgccaacaccattt 26146865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 109 - 217
Target Start/End: Complemental strand, 11234026 - 11233918
Alignment:
Q  109 ctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccctccaa 208  Q
    |||||||| |||||  ||||||| || |||||| ||||||||||||| ||| | | ||  ||||||||||||| ||||| |||||| ||||||||||||     
T  11234026 ctataccacaaacctactctatctaccaacatcgtccaacaccatttacctaacaaagcaaaattaaactccctcaacttcctaacccccaaccctccag 11233927  T
Q  209 gctcctttg 217  Q
     ||||||||    
T  11233926 actcctttg 11233918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 106 - 180
Target Start/End: Complemental strand, 26894151 - 26894077
Alignment:
Q  106 accctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcc 180  Q
    ||||||||||| ||||||||| | ||||| ||||||| |||||||||||||||| | | || |||||||||||||    
T  26894151 accctataccacaaaccacctatgtccaccaacatccgccaacaccattttcctaacaaagttaaattaaactcc 26894077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 106 - 180
Target Start/End: Complemental strand, 26899590 - 26899516
Alignment:
Q  106 accctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcc 180  Q
    ||||||||||| ||||||||| | ||||| ||||||| |||||||||||||||| | | || |||||||||||||    
T  26899590 accctataccacaaaccacctatgtccaccaacatccgccaacaccattttcctaacaaagttaaattaaactcc 26899516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 155
Target Start/End: Original strand, 14440249 - 14440394
Alignment:
Q  10 ccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccc 109  Q
    ||||||||||||||||| | ||| ||||||||  |||||||||||| ||||| | || |||| |  ||  || ||  |||||| ||||||  ||||||||    
T  14440249 ccatctctaatcctagctatctccctccaccacgaagaacaactccggcccccatcctccaaaccaccatccgccataccatacctagccaacaacaccc 14440348  T
Q  110 tataccaaaaaccacctctatccactaacatcctccaacaccattt 155  Q
    || |||| |||||||| ||||| |||||||  | ||||||||||||    
T  14440349 tacaccacaaaccacccctatcaactaacaaacgccaacaccattt 14440394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 68 - 152
Target Start/End: Complemental strand, 44028797 - 44028713
Alignment:
Q  68 ccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacacca 152  Q
    ||||||||||  |||||||||||||||| ||| | ||||| |  ||||| || ||| |||||||||||||||||||||| |||||    
T  44028797 ccaacctcccgtcctcctcaccatatctcgccgcaaacacacggtaccacaacccatctctatccactaacatcctccagcacca 44028713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 10 - 75
Target Start/End: Complemental strand, 11234114 - 11234049
Alignment:
Q  10 ccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctc 75  Q
    ||||||||||||||  | ||||| || ||||||||||||||||||| ||||| |||| ||||||||    
T  11234114 ccatctctaatcctccctacctcccttcaccaataagaacaactccggcccccaacctccaacctc 11234049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 121
Target Start/End: Original strand, 10689087 - 10689170
Alignment:
Q  37 caccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaac 121  Q
    |||||| |||||| ||||| ||||||| || |||||||||  ||||| |||||||||||  || |||||||||||||||| ||||    
T  10689087 caccaagaagaaccactccggccccaa-cctccaacctcctagcctcatcaccatatctcaccaccaacaccctataccataaac 10689170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 128 - 159
Target Start/End: Complemental strand, 355403 - 355372
Alignment:
Q  128 tatccactaacatcctccaacaccattttcct 159  Q
    ||||||||||||||||||||||||||||||||    
T  355403 tatccactaacatcctccaacaccattttcct 355372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 109 - 216
Target Start/End: Original strand, 15018281 - 15018388
Alignment:
Q  109 ctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccctccaa 208  Q
    ||||||||||| ||||| ||||||||| ||| ||||||||||||||| ||| | |  |  | ||||||||||  |||||| ||||| |  ||||||||||    
T  15018281 ctataccaaaatccacccctatccactgacaacctccaacaccatttccctaataaggcaatattaaactccttcaactgtctaacccataaccctccaa 15018380  T
Q  209 gctccttt 216  Q
     |||||||    
T  15018381 actccttt 15018388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 44 - 155
Target Start/End: Original strand, 37445632 - 37445743
Alignment:
Q  44 aagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcct 143  Q
    |||||||||||| ||||| | || |||||||||   ||||| ||||||| |||||| |||||||||||  ||| || ||| | ||||| |||||||  |     
T  37445632 aagaacaactccggcccccatcctccaacctcctgtcctccgcaccatacctagccaccaacaccctacgccagaacccatcactatcaactaacagacg 37445731  T
Q  144 ccaacaccattt 155  Q
    ||||||||||||    
T  37445732 ccaacaccattt 37445743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 155
Target Start/End: Complemental strand, 25380930 - 25380884
Alignment:
Q  109 ctataccaaaaaccacctctatccactaacatcctccaacaccattt 155  Q
    ||||||||||||||||| ||||||||||| |||||| | ||||||||    
T  25380930 ctataccaaaaaccacccctatccactaatatcctctagcaccattt 25380884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 139
Target Start/End: Original strand, 7301226 - 7301307
Alignment:
Q  58 ccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaaca 139  Q
    |||| |||| |||||||| ||| ||||| ||| || ||  || |||||||||||||| |||| |||||||||||||| ||||    
T  7301226 cccccaacctccaacctctctgtctccttaccgtacctcaccaccaacaccctatactaaaacccacctctatccaccaaca 7301307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 13550718 - 13550767
Alignment:
Q  106 accctataccaaaaaccacctctatccactaacatcctccaacaccattt 155  Q
    ||||||||||| ||| |||||||||| || |||| |||||||||||||||    
T  13550718 accctataccacaaatcacctctatcaaccaacaacctccaacaccattt 13550767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 13551171 - 13551220
Alignment:
Q  106 accctataccaaaaaccacctctatccactaacatcctccaacaccattt 155  Q
    ||||||||||| ||| |||||||||| || |||| |||||||||||||||    
T  13551171 accctataccacaaatcacctctatcaaccaacaacctccaacaccattt 13551220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 217
Target Start/End: Original strand, 45717775 - 45717864
Alignment:
Q  128 tatccactaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccctccaagctcctttg 217  Q
    ||||||| ||||||||||||||||| |||||| | |  |||||||||||  | |||| |  ||| || ||||||||||||| ||||||||    
T  45717775 tatccaccaacatcctccaacaccactttcctaataatgataaattaaaagctcccatcctcctcacccccaaccctccaacctcctttg 45717864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 12807671 - 12807615
Alignment:
Q  125 ctctatccactaacatcctccaacaccattttccttaaagagataaattaaactccc 181  Q
    |||||||||| ||||  ||||||||||| || ||| | |||||||||||||||||||    
T  12807671 ctctatccaccaacaatctccaacaccacttccctaacagagataaattaaactccc 12807615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 36804725 - 36804773
Alignment:
Q  111 ataccaaaaaccacctctatccactaacatcctccaacaccattttcct 159  Q
    |||||| |||||  |||| || |||||||||||||||||||||||||||    
T  36804725 ataccacaaaccttctctctctactaacatcctccaacaccattttcct 36804773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 7e-28; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 5 - 216
Target Start/End: Original strand, 19350444 - 19350655
Alignment:
Q  5 ctactccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaa 104  Q
    |||||||||| |||||| | || |||||  |||||||| | ||   ||||| ||||| |||| |||||||||||||||||||||||||||| ||| ||||    
T  19350444 ctactccatccctaatcttcgctacctccttccaccaagatgatacactccggcccccaacctccaacctccctgcctcctcaccatatctcgccaccaa 19350543  T
Q  105 caccctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccct 204  Q
    ||||||||||||||| ||||||||||| |  |||| || |||||||||||| ||    | || ||||||||| |||  ||||||||| || ||||  |||    
T  19350544 caccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagctaaattaaattcctgcaactgcctcacccccagacct 19350643  T
Q  205 ccaagctccttt 216  Q
    |||| |||||||    
T  19350644 ccaaactccttt 19350655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 28 - 155
Target Start/End: Original strand, 32186206 - 32186333
Alignment:
Q  28 acctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctc 127  Q
    ||||| ||||||||| |||||  ||||| ||||| |||| |||||||||| ||| |||||| |||||| ||| ||||||||||||||||||| |||||||    
T  32186206 acctccctccaccaagaagaagcactccggcccccaacctccaacctcccagccacctcactatatctcgccaccaacaccctataccaaaacccacctc 32186305  T
Q  128 tatccactaacatcctccaacaccattt 155  Q
    ||||||| |||| |  ||||||||||||    
T  32186306 tatccaccaacaactgccaacaccattt 32186333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 58 - 216
Target Start/End: Complemental strand, 29976595 - 29976437
Alignment:
Q  58 ccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattttc 157  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||| |  |||| || ||||| |||||| |    
T  29976595 cccccaacctccaacctccctgcctcctcaccatatctcgccaccaacaccctataccaaaacccacctctatctatcaacaaccgccaacgccatttac 29976496  T
Q  158 cttaaagagataaattaaactcccccaactgcctaactcccaaccctccaagctccttt 216  Q
    |    | || ||||||||| |||| ||||||||| || ||||  ||||||| |||||||    
T  29976495 ccatcaaagctaaattaaattcccgcaactgcctcacccccagacctccaaactccttt 29976437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 159
Target Start/End: Original strand, 25350726 - 25350876
Alignment:
Q  9 tccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacacc 108  Q
    |||||| |||||| | || | ||| ||| ||||| |||||  ||||| |||||  ||| |||||||||| |||||||||||||| |  ||| ||||||||    
T  25350726 tccatccctaatcttcgctatctccctcaaccaaaaagaatcactccggccccctaccaccaacctcccagcctcctcaccataccgcgccaccaacacc 25350825  T
Q  109 ctataccaaaaaccacctctatccactaacatcctccaacaccattttcct 159  Q
    |||||||| || ||| |||||||||| |||||||||||| |||||||||||    
T  25350826 ctataccagaacccatctctatccaccaacatcctccaaaaccattttcct 25350876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 68 - 152
Target Start/End: Complemental strand, 10920041 - 10919957
Alignment:
Q  68 ccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacacca 152  Q
    |||||||||| |||||||||||||| |||||  ||||||||||||||||||| || |||||||| || |||||||||||||||||    
T  10920041 ccaacctccccgcctcctcaccatacctagcaaccaacaccctataccaaaacccccctctatcaaccaacatcctccaacacca 10919957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 34 - 151
Target Start/End: Original strand, 26514253 - 26514370
Alignment:
Q  34 ctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatcca 133  Q
    |||||||||  ||||| ||||| ||||| |||| |||| |||||||||||||||||||| | |||| ||||||| |||||||| || ||  |||||||||    
T  26514253 ctccaccaaatagaaccactccggcccccaacctccaaactccctgcctcctcaccataccgagccaccaacactctataccagaacccctctctatcca 26514352  T
Q  134 ctaacatcctccaacacc 151  Q
    | | ||||||||||||||    
T  26514353 ccagcatcctccaacacc 26514370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 217
Target Start/End: Original strand, 13086044 - 13086251
Alignment:
Q  10 ccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccc 109  Q
    ||||||||||||||  | |||||  |||||||| |||||||||||| ||||| |||| ||||||||||| |  |||| ||||| |  ||  | |  || |    
T  13086044 ccatctctaatcctccctacctccttccaccaaaaagaacaactccggcccccaacctccaacctccctccaacctcgccataacgggcgactagaacac 13086143  T
Q  110 tataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccctccaag 209  Q
    ||||||| |||||  ||||||| || |||||||||||||||||||| ||| | | ||  | ||||||||||  ||||| |||||| ||||||||||||      
T  13086144 tataccacaaacctactctatctaccaacatcctccaacaccatttacctaacaaagcaacattaaactccttcaacttcctaacccccaaccctccagc 13086243  T
Q  210 ctcctttg 217  Q
    ||||||||    
T  13086244 ctcctttg 13086251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 155
Target Start/End: Complemental strand, 14843714 - 14843627
Alignment:
Q  68 ccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattt 155  Q
    |||||||||||| ||||||||||||||| ||  ||| ||||||||||||||||||| ||||||| || ||||| | ||||||||||||    
T  14843714 ccaacctccctgtctcctcaccatatctcgctaccagcaccctataccaaaaaccatctctatctaccaacattcgccaacaccattt 14843627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 900494 - 900385
Alignment:
Q  5 ctactccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaa 104  Q
    |||| ||||||||||||||||| | ||| |||||| ||||||||||||||  |||||       ||||||||||||||||||||| || |||||  ||||    
T  900494 ctacgccatctctaatcctagccaactccctccactaataagaacaactctggcccc-------caacctccctgcctcctcaccgtacctagcagccaa 900402  T
Q  105 caccctataccaaaaac 121  Q
    |||||||||||||||||    
T  900401 caccctataccaaaaac 900385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 155
Target Start/End: Original strand, 19256145 - 19256290
Alignment:
Q  10 ccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccc 109  Q
    ||||| ||||||||  | ||||| | ||||||| |||||||||||  ||||| |||| ||||||||||   | |||| ||||| |  ||  | || || |    
T  19256145 ccatccctaatcctccccacctcccgccaccaagaagaacaactctggcccccaacctccaacctcccacacacctcgccataacgggcgactaaaactc 19256244  T
Q  110 tataccaaaaaccacctctatccactaacatcctccaacaccattt 155  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  19256245 tataccaaaaaccacccctatccactaacatcctccaacaccattt 19256290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 155
Target Start/End: Original strand, 33640423 - 33640567
Alignment:
Q  10 ccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccc 109  Q
    ||||| ||||||||  | ||||| | ||||||| |||||||||||| ||||||| || ||||||||||   | |||| ||||| |  ||  | || || |    
T  33640423 ccatccctaatcctccccacctcccgccaccaagaagaacaactccggccccaa-cctccaacctcccacacacctcgccataacgggcgactaaaactc 33640521  T
Q  110 tataccaaaaaccacctctatccactaacatcctccaacaccattt 155  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  33640522 tataccaaaaaccacccctatccactaacatcctccaacaccattt 33640567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 44 - 155
Target Start/End: Complemental strand, 1104548 - 1104437
Alignment:
Q  44 aagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcct 143  Q
    |||||| ||||  ||||| |||| |||||||| |||||||||||||||| | |||  ||| |||||||||||| ||||||| |||||  |||||||  ||    
T  1104548 aagaactactcaggcccccaaccaccaacctcactgcctcctcaccataacgagcaaccatcaccctataccacaaaccacatctatttactaacaaact 1104449  T
Q  144 ccaacaccattt 155  Q
    ||||||||||||    
T  1104448 ccaacaccattt 1104437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 216
Target Start/End: Complemental strand, 503167 - 502961
Alignment:
Q  10 ccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccc 109  Q
    ||||| ||||||||  | ||||| | ||||||| |||||||||||| ||||| | || ||||||||||   | |||| ||||| |  ||  | || || |    
T  503167 ccatccctaatcctccccacctcccgccaccaagaagaacaactccggcccccatcctccaacctcccacacacctcgccataacgggcgactaaaactc 503068  T
Q  110 tataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccctccaag 209  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||| |||   |  |  | ||||||||||  |||||| ||||| || ||||||||||     
T  503067 tatatcaaaaaccacccctatccactaacatcctccaacaccatttccctagtaaggcaatattaaactccttcaactgtctaacccctaaccctccaaa 502968  T
Q  210 ctccttt 216  Q
    |||||||    
T  502967 ctccttt 502961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 180
Target Start/End: Complemental strand, 23347006 - 23346932
Alignment:
Q  106 accctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcc 180  Q
    ||||||||||| ||||||||||||||||| | ||||| |||||||||||||||| | | || |||||||||||||    
T  23347006 accctataccacaaaccacctctatccaccagcatccgccaacaccattttcctaacaaagctaaattaaactcc 23346932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 181
Target Start/End: Original strand, 29056065 - 29056195
Alignment:
Q  51 actccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacac 150  Q
    ||||| ||||| |||||||||||||||  ||||||||||||| |  ||  |||||||||||||||| | || | || |||| ||||| | ||||||||||    
T  29056065 actccggcccccaaccgccaacctcccatcctcctcaccataacgtgctaccaacaccctataccacatactatctttatcgactaataacctccaacac 29056164  T
Q  151 cattttccttaaagagataaattaaactccc 181  Q
    |||||| || | ||||| | |||||||||||    
T  29056165 catttttctaacagagaaacattaaactccc 29056195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 68 - 149
Target Start/End: Complemental strand, 7956248 - 7956167
Alignment:
Q  68 ccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaaca 149  Q
    ||||||||||  |||||||||||||||||||| ||||||| | |||||||| |||| ||||||| |||||||| | ||||||    
T  7956248 ccaacctcccgtcctcctcaccatatctagccaccaacactcgataccaaagaccatctctatcaactaacatacgccaaca 7956167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 68 - 141
Target Start/End: Original strand, 34180487 - 34180560
Alignment:
Q  68 ccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatc 141  Q
    ||||||| | |||||||||||||||||||||  |||||||||||||| ||| ||| |||||||| |||||||||    
T  34180487 ccaaccttcatgcctcctcaccatatctagcagccaacaccctatacgaaagacctcctctatcaactaacatc 34180560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 121
Target Start/End: Original strand, 10362664 - 10362749
Alignment:
Q  36 ccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaac 121  Q
    ||||||| |||||| ||||| |||||  ||| ||||||||||  |||||||||||||||| ||| |||| ||||||||||| ||||    
T  10362664 ccaccaagaagaaccactccggccccccacctccaacctcccatcctcctcaccatatctcgccaccaaaaccctataccataaac 10362749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 101 - 157
Target Start/End: Complemental strand, 28576004 - 28575949
Alignment:
Q  101 ccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattttc 157  Q
    |||||||||||||||| || || |||||||||||||||||||||||||| |||||||    
T  28576004 ccaacaccctataccataatcc-cctctatccactaacatcctccaacatcattttc 28575949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 85 - 180
Target Start/End: Original strand, 15674409 - 15674504
Alignment:
Q  85 tcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcc 180  Q
    ||||||||||| ||  | || ||||||||||| |||||| |||  ||||| ||||||| |||||||||||||||| | | || |||||||||||||    
T  15674409 tcaccatatctggcgactaaaaccctataccacaaaccatctcggtccaccaacatccgccaacaccattttcctaacaaagctaaattaaactcc 15674504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 14686547 - 14686498
Alignment:
Q  106 accctataccaaaaaccacctctatccactaacatcctccaacaccattt 155  Q
    |||||||||||||| || ||||||||||| ||||||| ||||||||||||    
T  14686547 accctataccaaaatccgcctctatccaccaacatccgccaacaccattt 14686498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 10 - 159
Target Start/End: Complemental strand, 17078825 - 17078676
Alignment:
Q  10 ccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccc 109  Q
    |||||||||||||   | ||||| ||||||||| |||||||||||| ||||| |||| ||||||||||  |  | || ||||| |  ||  | || || |    
T  17078825 ccatctctaatccgccctacctccctccaccaagaagaacaactccggcccccaacctccaacctcccacctacttcgccataacgggcgactaagactc 17078726  T
Q  110 tataccaaaaaccacctctatccactaacatcctccaacaccattttcct 159  Q
     ||||||||||||||  ||||| |||| ||||||||||||||| ||||||    
T  17078725 gataccaaaaaccactcctatcaactagcatcctccaacaccactttcct 17078676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 10 - 155
Target Start/End: Complemental strand, 17605969 - 17605824
Alignment:
Q  10 ccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccc 109  Q
    ||||||||||||||  ||| ||| |||||| || |||||||||||| ||||| | || |||| |  ||  ||||| | ||||| ||||||  ||||||||    
T  17605969 ccatctctaatcctcacaatctccctccacaaagaagaacaactccggcccccatcctccaaaccaccatcctccacgccatacctagccaacaacaccc 17605870  T
Q  110 tataccaaaaaccacctctatccactaacatcctccaacaccattt 155  Q
    ||  ||| ||||| || ||||| ||||||| || ||||||||||||    
T  17605869 tactccacaaacctcccctatcaactaacagccaccaacaccattt 17605824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 152
Target Start/End: Original strand, 18588912 - 18588996
Alignment:
Q  68 ccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacacca 152  Q
    ||||||||||  |||||||||||||||||||| ||||||| | |||||| || ||  ||||||| |||||||  | |||||||||    
T  18588912 ccaacctcccgtcctcctcaccatatctagccaccaacactcgataccataacccgtctctatcaactaacaaacgccaacacca 18588996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 158
Target Start/End: Original strand, 24573697 - 24573769
Alignment:
Q  86 caccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattttcc 158  Q
    |||||||||||||   ||| || ||| |||| |||||| |||||||||||| ||||||||||||||| |||||    
T  24573697 caccatatctagcagacaaaactctaaaccacaaaccatctctatccactaccatcctccaacaccactttcc 24573769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 10 - 77
Target Start/End: Complemental strand, 18051084 - 18051017
Alignment:
Q  10 ccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccc 77  Q
    |||||||||||||   | ||||| ||||||||| |||||||||||| ||||| |||| ||||||||||    
T  18051084 ccatctctaatccgccctacctccctccaccaagaagaacaactccggcccccaacctccaacctccc 18051017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 68 - 155
Target Start/End: Original strand, 34434823 - 34434910
Alignment:
Q  68 ccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattt 155  Q
    ||||||||||  |||||||||||||||| ||| |||| ||||||||||| | || ||  || || || ||||||| ||||||||||||    
T  34434823 ccaacctcccatcctcctcaccatatctcgccaccaaaaccctataccatatactactcctctctaccaacatccgccaacaccattt 34434910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 155
Target Start/End: Original strand, 33805400 - 33805430
Alignment:
Q  125 ctctatccactaacatcctccaacaccattt 155  Q
    |||||||||||||||||||||||||||||||    
T  33805400 ctctatccactaacatcctccaacaccattt 33805430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 156
Target Start/End: Original strand, 4478613 - 4478642
Alignment:
Q  127 ctatccactaacatcctccaacaccatttt 156  Q
    ||||||||||||||||||||||||||||||    
T  4478613 ctatccactaacatcctccaacaccatttt 4478642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 11060479 - 11060430
Alignment:
Q  28 acctctctccaccaataagaacaactccagccccaaaccgccaacctccc 77  Q
    ||||| ||||||||| |||||||||||| ||||| |||| ||||||||||    
T  11060479 acctccctccaccaagaagaacaactccggcccccaacctccaacctccc 11060430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 649607 - 649559
Alignment:
Q  111 ataccaaaaaccacctctatccactaacatcctccaacaccattttcct 159  Q
    ||||||||||||||  ||||| |||| ||||||||||||||| ||||||    
T  649607 ataccaaaaaccactcctatcaactagcatcctccaacaccactttcct 649559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 159
Target Start/End: Complemental strand, 18682183 - 18682060
Alignment:
Q  36 ccaccaataagaacaactccagccccaaaccgccaa-cctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccac 134  Q
    ||||||| |||||||||||| ||||| | || |||| ||||| | |||||  |||||| || ||| |||||||| || |||| || ||  |||| || ||    
T  18682183 ccaccaagaagaacaactccggcccccatcctccaaacctccat-cctccgaaccatacctggccaccaacaccttacaccataacccctctctgtcaac 18682085  T
Q  135 taacatcctccaacaccattttcct 159  Q
    ||||| |||||||||||||||||||    
T  18682084 taacaacctccaacaccattttcct 18682060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 3e-27; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 5 - 155
Target Start/End: Original strand, 9690922 - 9691072
Alignment:
Q  5 ctactccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaa 104  Q
    |||| ||||| |||||| | || | ||| |||||||||| ||||  ||||| ||||| |||| |||||||||| ||||||||||||||||||||  | |     
T  9690922 ctacaccatccctaatcttcgctatctccctccaccaatgagaaacactccggcccccaacctccaacctcccagcctcctcaccatatctagctactag 9691021  T
Q  105 caccctataccaaaaaccacctctatccactaacatcctccaacaccattt 155  Q
    ||||||||||||||| |||| ||||||||| |||| |||||||||||||||    
T  9691022 caccctataccaaaacccacatctatccaccaacaacctccaacaccattt 9691072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 34 - 207
Target Start/End: Complemental strand, 55725317 - 55725144
Alignment:
Q  34 ctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatcca 133  Q
    ||||||||| |||||||||||| ||||| | || |||| |  ||  ||||| ||||||| |||||| |||||||||||||||| || ||| ||||||| |    
T  55725317 ctccaccaagaagaacaactccggcccccatcctccaaaccaccatcctccacaccatacctagccaccaacaccctataccataatccatctctatcta 55725218  T
Q  134 ctaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccctcca 207  Q
    |||||| ||||||||||||||| ||| | | ||  || |||||||| | ||||  |||||| ||||||||||||    
T  55725217 ctaacaacctccaacaccatttccctaacaaagcaaagttaaactctctcaacctcctaacacccaaccctcca 55725144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 2365570 - 2365657
Alignment:
Q  69 caacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccatttt 156  Q
    |||||||||| ||||||||||||| | |||  |||||||||||||||| ||||| |||||||| |||||||||||||| |||||||||    
T  2365570 caacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttt 2365657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 216
Target Start/End: Original strand, 8935579 - 8935785
Alignment:
Q  10 ccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccc 109  Q
    ||||| ||||||||  | ||||| | ||||||| |||||||||||| ||||| | || ||||||||||   | |||| ||||| | |||  | || || |    
T  8935579 ccatccctaatcctccccacctcccgccaccaagaagaacaactccggcccccatcctccaacctcccacacacctcgccataacgagcgactaaaactc 8935678  T
Q  110 tataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccctccaag 209  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||   |  |  | ||||||||||  |||||| ||||| || ||||||||||     
T  8935679 tataccaaaaaccacccctatccactaacatcctccaacaccatttccctagtaaggcaatattaaactccttcaactgtctaacccctaaccctccaaa 8935778  T
Q  210 ctccttt 216  Q
    |||||||    
T  8935779 ctccttt 8935785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 109 - 216
Target Start/End: Original strand, 19115040 - 19115147
Alignment:
Q  109 ctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccctccaa 208  Q
    ||||||||||| ||||| ||||||||||||| ||||||||||||||| ||| | | ||  | ||||||||||  |||||| ||||| || ||||||||||    
T  19115040 ctataccaaaatccacccctatccactaacaacctccaacaccatttccctaataaagcaatattaaactccttcaactgtctaacccctaaccctccaa 19115139  T
Q  209 gctccttt 216  Q
     |||||||    
T  19115140 actccttt 19115147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 155
Target Start/End: Original strand, 19648306 - 19648352
Alignment:
Q  109 ctataccaaaaaccacctctatccactaacatcctccaacaccattt 155  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  19648306 ctataccaaaaaccacccctatccactaacatcctccaacaccattt 19648352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 180
Target Start/End: Original strand, 20675623 - 20675697
Alignment:
Q  106 accctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcc 180  Q
    ||||||||||| ||||||||||| ||||| ||||||| |||||||||||||||| | | || |||||||||||||    
T  20675623 accctataccacaaaccacctctgtccaccaacatccgccaacaccattttcctaacaaagctaaattaaactcc 20675697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 180
Target Start/End: Original strand, 55299213 - 55299287
Alignment:
Q  106 accctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcc 180  Q
    |||| |||||| ||||||||||||||||| ||||||| |||||||||||||||| | | || |||||||||||||    
T  55299213 acccgataccacaaaccacctctatccaccaacatccgccaacaccattttcctaacaaagctaaattaaactcc 55299287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 155
Target Start/End: Complemental strand, 55464490 - 55464363
Alignment:
Q  28 acctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctc 127  Q
    ||||| ||||||||  |||||| | | | ||||| ||| |||||||| |||||| ||||||| || | |||  |||  ||||||||||| ||||||||||    
T  55464490 acctccctccaccataaagaaccatttcggcccccaactgccaacctacctgccacctcaccgtaccgagcaaccagtaccctataccacaaaccacctc 55464391  T
Q  128 tatccactaacatcctccaacaccattt 155  Q
    |||| ||||||| |||||||||| ||||    
T  55464390 tatctactaacaacctccaacactattt 55464363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 109 - 155
Target Start/End: Original strand, 23657901 - 23657947
Alignment:
Q  109 ctataccaaaaaccacctctatccactaacatcctccaacaccattt 155  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||    
T  23657901 ctataccaaaaaccacccctatccactaacatccttcaacaccattt 23657947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 106 - 180
Target Start/End: Complemental strand, 23873015 - 23872941
Alignment:
Q  106 accctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcc 180  Q
    |||| |||||| |||||||||||||| || ||||||| |||||||||||||||| | | || |||||||||||||    
T  23873015 acccgataccacaaaccacctctatctaccaacatccgccaacaccattttcctaacaaagctaaattaaactcc 23872941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 155
Target Start/End: Original strand, 2072105 - 2072190
Alignment:
Q  70 aacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattt 155  Q
    ||||||| |||||||||||||||||| ||| ||| |||||||||||| |  || ||||||||||| ||||||  ||| ||||||||    
T  2072105 aacctccttgcctcctcaccatatctcgccaccagcaccctataccacatccctcctctatccaccaacatctgccatcaccattt 2072190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 3129528 - 3129479
Alignment:
Q  106 accctataccaaaaaccacctctatccactaacatcctccaacaccattt 155  Q
    ||||||||||| ||||||||||||||||| ||||||| ||||||||||||    
T  3129528 accctataccacaaaccacctctatccaccaacatccgccaacaccattt 3129479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 146
Target Start/End: Complemental strand, 29553276 - 29553239
Alignment:
Q  109 ctataccaaaaaccacctctatccactaacatcctcca 146  Q
    ||||||||||||||||||||||||||||||||||||||    
T  29553276 ctataccaaaaaccacctctatccactaacatcctcca 29553239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 155
Target Start/End: Original strand, 38296258 - 38296356
Alignment:
Q  57 gccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattt 155  Q
    ||||| |||| ||||||||||   | ||||||||||||| ||| |||||||||||||||||||||  |  || |||||||| | || ||||||||||||    
T  38296258 gcccccaacctccaacctcccattcacctcaccatatctcgccaccaacaccctataccaaaaactcctcctctccactaataaccgccaacaccattt 38296356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 207
Target Start/End: Complemental strand, 42953041 - 42952943
Alignment:
Q  109 ctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccctcca 207  Q
    |||||||| |||||  ||||||| || |||||||||||||||||||| ||| | | ||  ||||||||||||| |||   |||||| ||||||||||||    
T  42953041 ctataccacaaacctactctatctaccaacatcctccaacaccatttacctaacaaagcaaaattaaactccctcaatctcctaacccccaaccctcca 42952943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 46146258 - 46146331
Alignment:
Q  86 caccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattttcct 159  Q
    |||||||||||||| |||||||||||  ||| || ||| |||| || ||||||| ||| |||||||||||||||    
T  46146258 caccatatctagccaccaacaccctacgccacaacccatctctctctactaacaaccttcaacaccattttcct 46146331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 216
Target Start/End: Original strand, 7099003 - 7099193
Alignment:
Q  26 caacctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacc 125  Q
    |||||||  ||||||||  ||||| ||||| ||||| | || |||||||| |  |||||||||||||||||||   ||| |||| |||||| |||||  |    
T  7099003 caacctccttccaccaaatagaaccactccggcccccatcctccaacctctcatcctcctcaccatatctagctatcaaaacccgataccacaaaccctc 7099102  T
Q  126 tctatccactaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccctccaagctccttt 216  Q
    || ||| |||||||  ||||||||| | |||||  | |  |    ||||||||||| |||||||||||| ||||| ||||||  |||||||    
T  7099103 tcgatcaactaacaaactccaacacaactttcccaacaacgcctcattaaactccctcaactgcctaacacccaaacctccatactccttt 7099193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 155
Target Start/End: Complemental strand, 7662844 - 7662798
Alignment:
Q  109 ctataccaaaaaccacctctatccactaacatcctccaacaccattt 155  Q
    |||||||| ||||||||||| ||||| ||||||| ||||||||||||    
T  7662844 ctataccacaaaccacctctgtccaccaacatccgccaacaccattt 7662798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 181
Target Start/End: Original strand, 9777916 - 9778046
Alignment:
Q  51 actccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacac 150  Q
    ||||| ||||| ||||| |||||||||  ||||||||| ||| |  ||  |||||||||||||||| | || |||| |||| ||||  | ||||||||||    
T  9777916 actccggcccccaaccgtcaacctcccatcctcctcactataacgcgctaccaacaccctataccatatactacctttatcaactagtaacctccaacac 9778015  T
Q  151 cattttccttaaagagataaattaaactccc 181  Q
    |||||| || |  |||| | |||||||||||    
T  9778016 catttttctaattgagaaatattaaactccc 9778046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 155
Target Start/End: Original strand, 26694548 - 26694578
Alignment:
Q  125 ctctatccactaacatcctccaacaccattt 155  Q
    |||||||||||||||||||||||||||||||    
T  26694548 ctctatccactaacatcctccaacaccattt 26694578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 159
Target Start/End: Complemental strand, 56337140 - 56336986
Alignment:
Q  5 ctactccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaa 104  Q
    ||||||| || |||||| | || | ||| |||||||||  ||||  |||||  |||| |||| |||||| ||| |||||||||||||| || ||| | |     
T  56337140 ctactccgtccctaatcttcgctatctccctccaccaagtagaaacactccgacccccaacctccaaccgcccagcctcctcaccatacctcgccgctag 56337041  T
Q  105 caccctataccaaaaaccacctctatccactaacatcctccaacaccattttcct 159  Q
     ||||||||||| |||||  |||||||||| |||| ||  |||||||| ||||||    
T  56337040 taccctataccacaaacctactctatccaccaacaaccgacaacaccactttcct 56336986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 43516287 - 43516238
Alignment:
Q  106 accctataccaaaaaccacctctatccactaacatcctccaacaccattt 155  Q
    ||||||||||| ||||||||||||||| | ||||||  ||||||||||||    
T  43516287 accctataccataaaccacctctatccgccaacatctgccaacaccattt 43516238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 12726911 - 12726975
Alignment:
Q  112 taccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaa 176  Q
    |||||||||||  ||||||| || ||||||||||| |||||||| ||| | | ||||||||||||    
T  12726911 taccaaaaaccctctctatctaccaacatcctccagcaccatttacctaataaagataaattaaa 12726975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 68 - 207
Target Start/End: Complemental strand, 63876 - 63737
Alignment:
Q  68 ccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagaga 167  Q
    |||||||||||||||||||| ||||||| ||| ||||||| ||||||||||||  | || | ||||  ||||||| |||||||||||| |||   | ||     
T  63876 ccaacctccctgcctcctcatcatatctcgccaccaacactctataccaaaaattatctttgtccatcaacatccgccaacaccatttccctagcaaagc 63777  T
Q  168 taaattaaactcccccaactgcctaactcccaaccctcca 207  Q
    |||||||||||||| |||||||||||| ||||||||||||    
T  63776 taaattaaactccctcaactgcctaacccccaaccctcca 63737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 2e-25; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 34 - 201
Target Start/End: Complemental strand, 19014594 - 19014428
Alignment:
Q  34 ctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatcca 133  Q
    ||||||||| |||||  ||||| ||||||| || |||||||||||| ||||||||||||||| ||| |||||||   ||||||||| |||||||| ||||    
T  19014594 ctccaccaagaagaaacactccggccccaa-cctccaacctccctgtctcctcaccatatctcgccaccaacacttaataccaaaacccacctctgtcca 19014496  T
Q  134 ctaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaac 201  Q
    | ||||||| ||||| |||||| |||   | || |||||||||||||| |||||| ||||| ||||||    
T  19014495 ccaacatccgccaactccatttacctagcaaagctaaattaaactccctcaactgtctaacccccaac 19014428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 51 - 155
Target Start/End: Original strand, 28358436 - 28358540
Alignment:
Q  51 actccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacac 150  Q
    ||||| ||||| |||| |||||||||||||||||||||||||||| ||| |||||||||| |||||||| || |||||||| || ||||  |||||||||    
T  28358436 actccggcccccaacctccaacctccctgcctcctcaccatatctcgccaccaacaccctgtaccaaaacccgcctctatctaccaacaatctccaacac 28358535  T
Q  151 cattt 155  Q
    |||||    
T  28358536 cattt 28358540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 51 - 216
Target Start/End: Complemental strand, 3544695 - 3544530
Alignment:
Q  51 actccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacac 150  Q
    ||||| |||||  ||| |||||||||||||||||||||||||||| ||  ||| ||||||||||||||||||| ||||||| || ||||| | |||||||    
T  3544695 actccggccccctacctccaacctccctgcctcctcaccatatctcgctaccagcaccctataccaaaaaccatctctatctaccaacattcgccaacac 3544596  T
Q  151 cattttccttaaagagataaattaaactcccccaactgcctaactcccaaccctccaagctccttt 216  Q
    ||||| ||| | | |    |||||||||||| || ||  || |||||||||||||||  |||||||    
T  3544595 catttacctaacaaaacacaattaaactccctcagctatctcactcccaaccctccatactccttt 3544530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 68 - 216
Target Start/End: Original strand, 52692034 - 52692182
Alignment:
Q  68 ccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagaga 167  Q
    |||||||||| |||||||||||||| |  ||| |||||||||||||||| || ||  |||||||||| |||||||||||||||||||||||| | | ||     
T  52692034 ccaacctcccagcctcctcaccataccgcgccaccaacaccctataccagaacccctctctatccaccaacatcctccaacaccattttcctaataaagc 52692133  T
Q  168 taaattaaactcccccaactgcctaactcccaaccctccaagctccttt 216  Q
      ||||||| ||||  || ||||| ||||| || ||||||| |||||||    
T  52692134 acaattaaattcccttaattgcctcactcctaatcctccaaactccttt 52692182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 27393525 - 27393435
Alignment:
Q  69 caacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattttcct 159  Q
    |||||||||||||||||||||||| |||||  |||||||| ||||||| ||||| |||||||| || |||| |||||||||||| ||||||    
T  27393525 caacctccctgcctcctcaccatacctagcaaccaacaccatataccataaacctcctctatcaaccaacaacctccaacaccactttcct 27393435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 34 - 155
Target Start/End: Complemental strand, 1248196 - 1248076
Alignment:
Q  34 ctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatcca 133  Q
    ||||||||| | |||  ||||||||||| | || ||||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||| ||||||    
T  1248196 ctccaccaagatgaagtactccagccccta-cctccaacctccctacctcctcaccatatctcgccaccaacagcctataccaaaaaccacctttatcca 1248098  T
Q  134 ctaacatcctccaacaccattt 155  Q
    | || || | ||||||| ||||    
T  1248097 ccaatatacaccaacactattt 1248076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 106 - 180
Target Start/End: Complemental strand, 32352849 - 32352775
Alignment:
Q  106 accctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcc 180  Q
    ||||||||||| ||||||||||||||||| ||||||| |||||||||||||||| | | || |||||||||||||    
T  32352849 accctataccacaaaccacctctatccaccaacatccgccaacaccattttcctaacaaagctaaattaaactcc 32352775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 26 - 155
Target Start/End: Complemental strand, 25504613 - 25504484
Alignment:
Q  26 caacctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacc 125  Q
    ||||||| | ||||||| |||||||||||  ||||| |||| ||||||||||   | |||| ||||| |  ||  | || || |||||||||||||||||    
T  25504613 caacctcccgccaccaagaagaacaactctggcccccaacctccaacctcccacacacctcgccataacgggcgactaaaactctataccaaaaaccacc 25504514  T
Q  126 tctatccactaacatcctccaacaccattt 155  Q
     |||||||||||||||||||||||||||||    
T  25504513 cctatccactaacatcctccaacaccattt 25504484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 157
Target Start/End: Original strand, 38070357 - 38070484
Alignment:
Q  30 ctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctcta 129  Q
    |||||||||||||  ||||  |||||  |||| |||| |||||| ||| |||||||||||||| || ||| |||| || |||||||| || || ||||||    
T  38070357 ctctctccaccaagtagaaacactccgacccccaacctccaaccgcccagcctcctcaccataccttgccaccaaaactctataccacaaccctcctcta 38070456  T
Q  130 tccactaacatcctccaacaccattttc 157  Q
    ||||| |||| || ||||||||||||||    
T  38070457 tccaccaacaaccgccaacaccattttc 38070484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 7 - 150
Target Start/End: Complemental strand, 40563196 - 40563053
Alignment:
Q  7 actccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaaca 106  Q
    |||||||| |||||| | || | ||||||||||||| | |||  | ||| ||||| |||| |||||||| ||||||| || |||||||| ||| |||| |    
T  40563196 actccatccctaatcttcgctatctctctccaccaagatgaaacagtccggcccccaacctccaacctctctgcctcatctccatatctcgccaccaaaa 40563097  T
Q  107 ccctataccaaaaaccacctctatccactaacatcctccaacac 150  Q
    | |||||||| || ||  |||||||||| |||||||||||||||    
T  40563096 ctctataccacaacccgtctctatccaccaacatcctccaacac 40563053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 181
Target Start/End: Complemental strand, 22191376 - 22191246
Alignment:
Q  51 actccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacac 150  Q
    ||||| ||||| |||| ||||||||||  ||||||||||||| |  ||| |||||||||||||||| | || |||  |||| ||||| | ||||||||||    
T  22191376 actccggcccccaaccaccaacctcccatcctcctcaccataacacgccaccaacaccctataccacatactacccttatcaactaataacctccaacac 22191277  T
Q  151 cattttccttaaagagataaattaaactccc 181  Q
    ||||| ||| | ||||| | |||||||||||    
T  22191276 catttacctaacagagaaacattaaactccc 22191246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 180
Target Start/End: Complemental strand, 48072970 - 48072896
Alignment:
Q  106 accctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcc 180  Q
    |||| |||||| ||||||||||||||||| ||||||| |||||||||||||||| | | || |||||||||||||    
T  48072970 acccgataccacaaaccacctctatccaccaacatccgccaacaccattttcctaacaaagctaaattaaactcc 48072896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 51 - 155
Target Start/End: Complemental strand, 13867427 - 13867323
Alignment:
Q  51 actccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacac 150  Q
    ||||| ||||| |||| |||||| ||| |||  ||||||||| | |||  |||  ||||||||||| ||||||||||||||||| ||||||| |||||||    
T  13867427 actcctgcccccaacctccaaccgcccagccgtctcaccataccgagctaccaggaccctataccataaaccacctctatccaccaacatccgccaacac 13867328  T
Q  151 cattt 155  Q
    |||||    
T  13867327 cattt 13867323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 57 - 181
Target Start/End: Original strand, 21405389 - 21405513
Alignment:
Q  57 gccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccatttt 156  Q
    ||||| |||| ||||||||||  ||||||||||||| |  ||  |||||||||||||||| | || |||  |||| ||||| | ||||||||||||||||    
T  21405389 gcccccaaccaccaacctcccatcctcctcaccataacgtgctaccaacaccctataccacatactacccttatcaactaataacctccaacaccatttt 21405488  T
Q  157 ccttaaagagataaattaaactccc 181  Q
    ||| | ||||| | |||||||||||    
T  21405489 cctaacagagaaacattaaactccc 21405513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 10 - 78
Target Start/End: Complemental strand, 49264599 - 49264531
Alignment:
Q  10 ccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccct 78  Q
    ||||||||||||||  | ||||| |||||||||||||||||||||| ||||| |||| |||||||||||    
T  49264599 ccatctctaatcctccccacctccctccaccaataagaacaactccggcccccaacctccaacctccct 49264531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 77
Target Start/End: Original strand, 39430782 - 39430849
Alignment:
Q  10 ccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccc 77  Q
    ||||||||||||||  | ||||| |||||||||||||||||||||| ||||| |||| ||||||||||    
T  39430782 ccatctctaatcctccccacctccctccaccaataagaacaactccggcccccaacctccaacctccc 39430849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 63 - 181
Target Start/End: Original strand, 3074303 - 3074421
Alignment:
Q  63 aaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaa 162  Q
    |||||||||||||||  ||||||||||||| |  ||  |||||||||||||||| | || |||| ||||  |||  | ||||||||||||||||||| |     
T  3074303 aaccgccaacctcccatcctcctcaccataacgcgctaccaacaccctataccacatactacctttatcgtctagtaacctccaacaccattttcctaac 3074402  T
Q  163 agagataaattaaactccc 181  Q
    ||||| | |||||||||||    
T  3074403 agagaaacattaaactccc 3074421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 20796173 - 20796238
Alignment:
Q  10 ccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctc 75  Q
    ||||||||||||||  | ||||| |||||||||||||||||||||| ||||| |||| ||||||||    
T  20796173 ccatctctaatcctccccacctccctccaccaataagaacaactccggcccccaacctccaacctc 20796238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 155
Target Start/End: Original strand, 20987730 - 20987805
Alignment:
Q  80 cctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattt 155  Q
    ||||||||||||| | |||| |||||||||||| ||| || ||  |||||||||| ||||||||||| ||||||||    
T  20987730 cctcctcaccataccgagccaccaacaccctatgccataacccttctctatccaccaacatcctccagcaccattt 20987805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 176
Target Start/End: Complemental strand, 33142778 - 33142682
Alignment:
Q  80 cctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaa 176  Q
    |||||||||| || |  ||| |||||||||||||||| || ||  ||||||| ||||||| ||||||||||||||| ||| | ||||  ||||||||    
T  33142778 cctcctcaccgtaacgggccaccaacaccctataccacaagccttctctatcaactaacaacctccaacaccatttacctaagagagccaaattaaa 33142682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 207
Target Start/End: Complemental strand, 7396258 - 7396160
Alignment:
Q  109 ctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccctcca 207  Q
    ||||| |||||||||||  |||| || |||||||||||||||||  | ||| ||| ||   |||||||||||| |||||| ||||| | ||||||||||    
T  7396258 ctatatcaaaaaccacccatatcaaccaacatcctccaacaccacatgcctaaaaaagcataattaaactccctcaactgtctaaccctcaaccctcca 7396160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 17827806 - 17827856
Alignment:
Q  11 catctctaatcctagcaacctctctccaccaataagaacaactccagcccc 61  Q
    |||||||||||||  | ||||| |||||||||||||||||||| |||||||    
T  17827806 catctctaatcctccctacctccctccaccaataagaacaacttcagcccc 17827856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 217
Target Start/End: Original strand, 20796288 - 20796369
Alignment:
Q  136 aacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccctccaagctcctttg 217  Q
    |||||||||||||||||||| ||| | | ||  ||||||||||||| ||||  |||||| ||||| ||||||  ||||||||    
T  20796288 aacatcctccaacaccatttacctaacaaagcaaaattaaactccctcaacctcctaacccccaatcctccagactcctttg 20796369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 152
Target Start/End: Complemental strand, 43944012 - 43943971
Alignment:
Q  111 ataccaaaaaccacctctatccactaacatcctccaacacca 152  Q
    |||||| |||||| ||||||| ||||||||||||||||||||    
T  43944012 ataccacaaaccatctctatcaactaacatcctccaacacca 43943971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 155
Target Start/End: Original strand, 45795880 - 45795925
Alignment:
Q  110 tataccaaaaaccacctctatccactaacatcctccaacaccattt 155  Q
    ||||||| ||||||||| ||||||| ||||||| ||||||||||||    
T  45795880 tataccataaaccacctttatccaccaacatccgccaacaccattt 45795925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 7 - 149
Target Start/End: Original strand, 6590 - 6732
Alignment:
Q  7 actccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaaca 106  Q
    |||||||| |||||| | || ||||||||||||||  | |||  ||||||||||| |||| |||||||||||||||||||||||||||| ||| | || |    
T  6590 actccatccctaatcttcgctacctctctccaccatgatgaagcactccagcccccaacctccaacctccctgcctcctcaccatatctcgccactaaaa 6689  T
Q  107 ccctataccaaaaaccacctctatccactaacatcctccaaca 149  Q
    |||||||||| ||||| ||||  || || ||||||||||||||    
T  6690 ccctataccacaaaccgcctcgctctaccaacatcctccaaca 6732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 7e-25; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 34 - 216
Target Start/End: Original strand, 25193617 - 25193799
Alignment:
Q  34 ctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatcca 133  Q
    |||||||||||||||  ||||| |||||  ||| |||||||||| |||||||||||||| |   || ||||||||| |||||| || ||| |||||||||    
T  25193617 ctccaccaataagaatcactccggccccctacctccaacctcccagcctcctcaccataccgcaccaccaacacccgataccagaacccatctctatcca 25193716  T
Q  134 ctaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccctccaagctccttt 216  Q
    | ||||||||||| |||||||||||| | | ||   ||||||| ||||  |||||||| || ||||| ||||||| |||||||    
T  25193717 ccaacatcctccagcaccattttcctaataaagcacaattaaattcccttaactgcctcacacccaatcctccaaactccttt 25193799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 34 - 155
Target Start/End: Complemental strand, 29721521 - 29721400
Alignment:
Q  34 ctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatcca 133  Q
    ||||||||||||||   ||||| |||||  ||| |||||||||| | ||||||||||||||| ||| |||| ||||||||||| || ||||||  ||| |    
T  29721521 ctccaccaataagagacactccggccccctacctccaacctcccaggctcctcaccatatctcgccaccaaaaccctataccacaacccaccttgatcaa 29721422  T
Q  134 ctaacatcctccaacaccattt 155  Q
    ||||||||||||||||||||||    
T  29721421 ctaacatcctccaacaccattt 29721400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 34 - 159
Target Start/End: Original strand, 12341096 - 12341221
Alignment:
Q  34 ctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatcca 133  Q
    |||||||||| ||||  ||||| || || |||| |||||| ||| |||||||||||||| || ||| |||  |||||| |||| || || ||||||||||    
T  12341096 ctccaccaattagaaacactccggctcccaacctccaaccgcccagcctcctcaccatacctcgccaccagtaccctaaaccacaaccctcctctatcca 12341195  T
Q  134 ctaacatcctccaacaccattttcct 159  Q
    ||||||||||||||||||| ||||||    
T  12341196 ctaacatcctccaacaccactttcct 12341221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 25 - 155
Target Start/End: Original strand, 18187666 - 18187796
Alignment:
Q  25 gcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccac 124  Q
    ||||||||  |||||||  |||||| ||||| ||||  ||| ||||||| |||| ||||||||||||||| | |  ||| | |||||||||| |||||||    
T  18187666 gcaacctccttccaccacaaagaaccactccggccctcaactgccaaccgccctacctcctcaccatatcaatcaaccagctccctataccacaaaccac 18187765  T
Q  125 ctctatccactaacatcctccaacaccattt 155  Q
    ||||||| |||||||  ||||||||||||||    
T  18187766 ctctatctactaacaatctccaacaccattt 18187796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 159
Target Start/End: Complemental strand, 37165761 - 37165607
Alignment:
Q  5 ctactccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaa 104  Q
    ||||||| || |||||| | || | ||| |||||||||  ||||  ||||| ||||| |||| |||||| |||  ||||||| |||||||| ||| |||     
T  37165761 ctactccgtccctaatcttcgctatctccctccaccaagtagaaacactccggcccccaacctccaaccgcccatcctcctcgccatatctcgccaccag 37165662  T
Q  105 caccctataccaaaaaccacctctatccactaacatcctccaacaccattttcct 159  Q
     ||||||||||| || || |||||||||||||||||||||||||| || ||||||    
T  37165661 taccctataccacaagcctcctctatccactaacatcctccaacatcactttcct 37165607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 63 - 159
Target Start/End: Original strand, 36025079 - 36025175
Alignment:
Q  63 aaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattttcct 159  Q
    |||| |||||| ||| ||||||||||||||||| ||| |||| || |||||||| || || ||||||||||| ||||||| ||||||||||| ||||    
T  36025079 aacctccaaccgcccagcctcctcaccatatctcgccaccaaaactctataccataaccctcctctatccaccaacatccgccaacaccattatcct 36025175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 80 - 159
Target Start/End: Original strand, 8902402 - 8902481
Alignment:
Q  80 cctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattttcct 159  Q
    ||||||||||||| | |||| | |||||||||||||| || ||| ||||||| |||||||||| ||||||||||||||||    
T  8902402 cctcctcaccataacgagccactaacaccctataccacaagccagctctatcaactaacatccgccaacaccattttcct 8902481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 68 - 155
Target Start/End: Original strand, 15439680 - 15439767
Alignment:
Q  68 ccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattt 155  Q
    |||||||||||||||||||||||||    ||| |||||||||||||||| |||||| |||||| ||| ||||||  ||||||||||||    
T  15439680 ccaacctccctgcctcctcaccatactgcgcccccaacaccctataccataaaccatctctattcaccaacatctgccaacaccattt 15439767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 68 - 155
Target Start/End: Original strand, 15530984 - 15531071
Alignment:
Q  68 ccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattt 155  Q
    |||||||||||||||||||||||||    ||| |||||||||||||||| |||||| |||||| ||| ||||||  ||||||||||||    
T  15530984 ccaacctccctgcctcctcaccatactgcgcccccaacaccctataccataaaccatctctattcaccaacatctgccaacaccattt 15531071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 36 - 121
Target Start/End: Original strand, 36492912 - 36492997
Alignment:
Q  36 ccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaac 121  Q
    ||||||| ||||||  |||| ||||| |||||||||||||||  ||||||||||||| || ||| |||||||||||||||| ||||    
T  36492912 ccaccaagaagaacctctccggcccccaaccgccaacctcccatcctcctcaccatacctcgccaccaacaccctataccataaac 36492997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 77
Target Start/End: Original strand, 36157659 - 36157726
Alignment:
Q  10 ccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccc 77  Q
    |||||||||||||| || ||||| ||||||||| |||||||||||| ||||| |||| ||||||||||    
T  36157659 ccatctctaatcctcgccacctccctccaccaagaagaacaactccggcccccaacctccaacctccc 36157726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 109 - 155
Target Start/End: Complemental strand, 4987601 - 4987555
Alignment:
Q  109 ctataccaaaaaccacctctatccactaacatcctccaacaccattt 155  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||    
T  4987601 ctataccaaaaaccacccccatccactaacatcctccaacaccattt 4987555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 155
Target Start/End: Original strand, 20824804 - 20824949
Alignment:
Q  10 ccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccc 109  Q
    ||||||||||||||  ||| ||| ||||||||  |||||||||||| ||||| | || |||| |  ||  ||||| | ||||| ||||||  ||||||||    
T  20824804 ccatctctaatcctcacaatctccctccaccacaaagaacaactccggcccccatcctccaaaccaccatcctccacgccatacctagccaacaacaccc 20824903  T
Q  110 tataccaaaaaccacctctatccactaacatcctccaacaccattt 155  Q
    ||  ||| ||||| || ||||| ||||||| |||||||||||||||    
T  20824904 tactccacaaacctcccctatcaactaacagcctccaacaccattt 20824949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 68 - 155
Target Start/End: Original strand, 12332411 - 12332498
Alignment:
Q  68 ccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattt 155  Q
    ||||||||||  |||||||||||||||| ||| |||||||||||||||||| || ||  || |||||||| |  | ||||||||||||    
T  12332411 ccaacctcccatcctcctcaccatatctcgccaccaacaccctataccaaagactacacctctccactaataaacgccaacaccattt 12332498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 105 - 216
Target Start/End: Complemental strand, 16048456 - 16048345
Alignment:
Q  105 caccctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccct 204  Q
    ||||||| | || ||||| ||||||||||  |||||||||||||||||||| ||| ||||||  |  |||||||||| || |||||||   |||||||||    
T  16048456 caccctaaagcacaaaccccctctatccatcaacatcctccaacaccatttacctaaaagagccatgttaaactccctcatctgcctagtccccaaccct 16048357  T
Q  205 ccaagctccttt 216  Q
    |||  |||||||    
T  16048356 ccatactccttt 16048345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 207
Target Start/End: Original strand, 24794350 - 24794448
Alignment:
Q  109 ctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccctcca 207  Q
    |||||||| |||||  ||||||| || |||||||||||||||||||| ||| | | ||  ||||||||||||| |||   |||||| ||||||||||||    
T  24794350 ctataccacaaacctactctatctaccaacatcctccaacaccatttacctaacaaagcaaaattaaactccctcaatctcctaacccccaaccctcca 24794448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 13 - 116
Target Start/End: Complemental strand, 4310474 - 4310371
Alignment:
Q  13 tctctaatcctagcaacctctctccaccaataagaacaactccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctat 112  Q
    |||||||||||| |||||||  |||||||| |||||| ||||| ||||| | || ||||||||||  ||    || ||||||||||  ||||||||||||    
T  4310474 tctctaatcctaccaacctccttccaccaaaaagaaccactccggcccccatcctccaacctcccatccctaacatcatatctagcaaccaacaccctat 4310375  T
Q  113 acca 116  Q
    ||||    
T  4310374 acca 4310371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 130 - 217
Target Start/End: Original strand, 25320436 - 25320523
Alignment:
Q  130 tccactaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccctccaagctcctttg 217  Q
    ||||| |||||||||||||||||||||||  | | ||| ||||||||||| |  ||| ||||||| |||||||| |||  ||||||||    
T  25320436 tccaccaacatcctccaacaccattttcccaacaaagaaaaattaaactctcttaaccgcctaacccccaaccccccatcctcctttg 25320523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 17659354 - 17659403
Alignment:
Q  28 acctctctccaccaataagaacaactccagccccaaaccgccaacctccc 77  Q
    ||||| ||||||||| |||||||||||| ||||| |||| ||||||||||    
T  17659354 acctccctccaccaagaagaacaactccggcccccaacctccaacctccc 17659403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 156
Target Start/End: Complemental strand, 26774769 - 26774736
Alignment:
Q  123 acctctatccactaacatcctccaacaccatttt 156  Q
    ||||||||| ||||||||||||||||||||||||    
T  26774769 acctctatcaactaacatcctccaacaccatttt 26774736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 152
Target Start/End: Original strand, 7452955 - 7452999
Alignment:
Q  108 cctataccaaaaaccacctctatccactaacatcctccaacacca 152  Q
    ||||||||| ||||||||||| ||||| ||||||| |||||||||    
T  7452955 cctataccacaaaccacctctgtccaccaacatccgccaacacca 7452999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 217
Target Start/End: Complemental strand, 11393884 - 11393776
Alignment:
Q  109 ctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccctccaa 208  Q
    |||||||| |||||  ||||||| || |||| ||||||||||||||| ||| | |  |  ||||||||||||| |||   |||||| ||||||||||||     
T  11393884 ctataccacaaacctactctatcgaccaacaacctccaacaccatttacctaacaatgcaaaattaaactccctcaatcacctaacccccaaccctccag 11393785  T
Q  209 gctcctttg 217  Q
     ||||||||    
T  11393784 actcctttg 11393776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 80 - 176
Target Start/End: Complemental strand, 38737568 - 38737472
Alignment:
Q  80 cctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaa 176  Q
    ||||| |||| |||||||||   |||||||||||||| |||| | ||| ||||||||| |  ||||||||||| || ||| | |||| |||||||||    
T  38737568 cctccacaccgtatctagccgataacaccctataccacaaactatctcgatccactaataatctccaacaccacttccctaatagagctaaattaaa 38737472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 45255463 - 45255407
Alignment:
Q  10 ccatctctaatcctagcaacctctctccaccaataagaacaactccagccccaaacc 66  Q
    |||||||||||||   | ||||||||||||||| ||||||||||||| |||| ||||    
T  45255463 ccatctctaatccgccctacctctctccaccaagaagaacaactccaacccccaacc 45255407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 51 - 216
Target Start/End: Complemental strand, 34203 - 34038
Alignment:
Q  51 actccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacac 150  Q
    ||||| |||||  ||| |||||||||||| ||||||||||||||| ||  ||| ||||||||||||||||||| |||| || || ||||| | |||||||    
T  34203 actccggccccctacctccaacctccctgtctcctcaccatatctcgctaccagcaccctataccaaaaaccatctctctctaccaacattcgccaacac 34104  T
Q  151 cattttccttaaagagataaattaaactcccccaactgcctaactcccaaccctccaagctccttt 216  Q
    | ||| ||| | | ||    ||||||||||| || ||| || |||||||||||||||  |||||||    
T  34103 cttttacctaacaaagcactattaaactccctcagctgtctcactcccaaccctccatactccttt 34038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 176
Target Start/End: Original strand, 36081 - 36175
Alignment:
Q  82 tcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaa 176  Q
    ||||||||||| | |||| ||||||| |||||||| ||||||  |||||| |||| |||||||||||||||||||||| | ||||  ||||||||    
T  36081 tcctcaccataacgagccaccaacactctataccacaaaccatttctatctactatcatcctccaacaccattttcctaagagagccaaattaaa 36175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 216
Target Start/End: Complemental strand, 4095 - 3985
Alignment:
Q  106 accctataccaaaaaccacctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccctc 205  Q
    ||||||||||| |||||| |||||||||| ||||||| |||||||||||| ||| | ||||    ||||||||||  |||||| || || ||||| ||||    
T  4095 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacagagcactattaaactccttcaactgtctcacccccaaacctc 3996  T
Q  206 caagctccttt 216  Q
    ||  |||||||    
T  3995 catactccttt 3985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 134393 - 134344
Alignment:
Q  106 accctataccaaaaaccacctctatccactaacatcctccaacaccattt 155  Q
    ||||||||||| |||||| |||||||||| ||||||| ||||||||||||    
T  134393 accctataccacaaaccatctctatccaccaacatccgccaacaccattt 134344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 312220 - 312171
Alignment:
Q  106 accctataccaaaaaccacctctatccactaacatcctccaacaccattt 155  Q
    ||||||||||| |||||| |||||||||| ||||||| ||||||||||||    
T  312220 accctataccacaaaccatctctatccaccaacatccgccaacaccattt 312171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 327674 - 327625
Alignment:
Q  106 accctataccaaaaaccacctctatccactaacatcctccaacaccattt 155  Q
    ||||||||||| |||||| |||||||||| ||||||| ||||||||||||    
T  327674 accctataccacaaaccatctctatccaccaacatccgccaacaccattt 327625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 68 - 155
Target Start/End: Original strand, 28337 - 28424
Alignment:
Q  68 ccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaaccacctctatccactaacatcctccaacaccattt 155  Q
    ||||||||||  ||||||| |||||||| ||| |||||||||||||||| |||| ||  || ||||| ||||  | ||||||||||||    
T  28337 ccaacctcccatcctcctcgccatatcttgccaccaacaccctataccacaaactactcctctccaccaacaaacgccaacaccattt 28424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 155
Target Start/End: Original strand, 8208 - 8254
Alignment:
Q  109 ctataccaaaaaccacctctatccactaacatcctccaacaccattt 155  Q
    |||||||| ||||||||||| ||||| ||||||| ||||||||||||    
T  8208 ctataccacaaaccacctctgtccaccaacatccgccaacaccattt 8254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 121
Target Start/End: Original strand, 55208 - 55278
Alignment:
Q  51 actccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaac 121  Q
    ||||| ||||| |||| |||||||| |  ||||||| |||||||| ||| |||||||||||||||| ||||    
T  55208 actccggcccccaacctccaacctctcatcctcctcgccatatctcgccaccaacaccctataccataaac 55278  T

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Target: scaffold0017 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 121
Target Start/End: Complemental strand, 143426 - 143356
Alignment:
Q  51 actccagccccaaaccgccaacctccctgcctcctcaccatatctagcctccaacaccctataccaaaaac 121  Q
    ||||| ||||| |||| |||||||| |  ||||||| |||||||| ||| |||||||||||||||| ||||    
T  143426 actccggcccccaacctccaacctctcatcctcctcgccatatctcgccaccaacaccctataccataaac 143356  T

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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 206
Target Start/End: Complemental strand, 3086 - 3018
Alignment:
Q  138 catcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccctcc 206  Q
    |||||||||||||||||| ||| | | ||| ||||||||  | | |||||||||||| |||||||||||    
T  3086 catcctccaacaccatttacctaataaagaaaaattaaaagctctcaactgcctaacccccaaccctcc 3018  T

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