View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17388_high_13 (Length: 248)
Name: NF17388_high_13
Description: NF17388
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17388_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 16 - 230
Target Start/End: Complemental strand, 2723699 - 2723485
Alignment:
| Q |
16 |
atgaaatatatatacaaccttagccaaaaaatgatataagaaagttgatatgaaacttcttatagaaatgcatttctgaaaaaacattcttatcattctc |
115 |
Q |
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| T |
2723699 |
atgaaatatatatacaaccttagccaaaaaatgatataagaaagttgatatgaaacttcttatagaaatgcatttctgaaaaaacattcttatcattctc |
2723600 |
T |
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| Q |
116 |
acaagatgaaaaatacagcggccgagatttcactggagagatacacgagagaatggtccacaacataatgggaggagatcctctcgcatggaatttgtct |
215 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |
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| T |
2723599 |
acaagatgaaaaatacaacggccgagatttcactggagagatacacgagagaatggtccacaacataacgggaggagatcctctcccatggaatttgtct |
2723500 |
T |
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| Q |
216 |
cacgtgtagtctaag |
230 |
Q |
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|| |||||||||||| |
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| T |
2723499 |
catgtgtagtctaag |
2723485 |
T |
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