View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17389_low_2 (Length: 639)

Name: NF17389_low_2
Description: NF17389
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17389_low_2
NF17389_low_2
[»] chr5 (4 HSPs)
chr5 (6-628)||(26103867-26104489)
chr5 (468-623)||(33532218-33532382)
chr5 (285-415)||(33532411-33532541)
chr5 (81-155)||(33532672-33532743)
[»] chr3 (17 HSPs)
chr3 (102-415)||(25027012-25027325)
chr3 (61-415)||(25014134-25014485)
chr3 (178-368)||(24971929-24972120)
chr3 (468-554)||(25013396-25013482)
chr3 (61-415)||(24990597-24990948)
chr3 (471-554)||(24990983-24991066)
chr3 (474-554)||(25014523-25014603)
chr3 (459-529)||(25017871-25017941)
chr3 (459-554)||(24971767-24971862)
chr3 (578-622)||(25027482-25027526)
chr3 (459-550)||(25027345-25027436)
chr3 (573-623)||(24991103-24991153)
chr3 (573-623)||(25014640-25014690)
chr3 (571-606)||(21787995-21788030)
chr3 (573-623)||(25013519-25013569)
chr3 (573-622)||(25036519-25036568)
chr3 (571-623)||(21794681-21794733)
[»] chr2 (3 HSPs)
chr2 (468-623)||(16868965-16869129)
chr2 (285-415)||(16868806-16868936)
chr2 (81-155)||(16868604-16868675)


Alignment Details
Target: chr5 (Bit Score: 547; Significance: 0; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 547; E-Value: 0
Query Start/End: Original strand, 6 - 628
Target Start/End: Original strand, 26103867 - 26104489
Alignment:
Q  6 aagaagaagaagaaacaaacaaccactagcaccaacaaaaaactggttcagaacgagccagaagaagaaacaaacaaaacaaacactgttacggaacaag 105  Q
    |||||||||||||||||| ||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  26103867 aagaagaagaagaaacaagcaaccactagcaccaacaacaaactgattcagaacaagccagaagaagaaacaaacaaaacaaacactgttatggaacaag 26103966  T
Q  106 gtgaatcctcgaaaagctttaactgcggtatatgctttgattctgtaacatatactagtttgttcacagctagttcatgcaatcatctattttgtactaa 205  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| | | |||| | ||||||| ||||||||||||||||||| ||||||||||||    
T  26103967 gtgaatcctcaaaaagctttaactgcggtatatgctttgattctgtaaaaaacactaatatgttcactgctagttcatgcaatcatccattttgtactaa 26104066  T
Q  206 ttgcatatccaagtatgtggctgttgaaagagagaaagatgtggtgaaagtgaattgtccggagccggaatgtactgtggaactgaaaccagaaactttg 305  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  26104067 ttgcatatccaagtatgtggctgttcaaagagagaaagatgtggtgaaagtgaattgtccggagccggaatgtattgtggaactgaaactagaaactttg 26104166  T
Q  306 caatattttttacctaaaaaagttattgctgattgggaatatgcaatttttgagtcttctatttctacaaagcaaatattttactgcccttacaataatt 405  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26104167 caatattttttacctaaaaaagttattgctgattgggaatatgcaatttttgagtcttctatttatacaaagcaaatattttactgcccttacaataatt 26104266  T
Q  406 gttctcttttcccctcaaaaaagaagaagaattgttctcgtttaatggtggaggagggtgtcacaagttgtgaatgcccttcttgtcatgggttaatctg 505  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26104267 gttctcttttcccctcaaaaaagaagaagaattgttctcgtttaatggtggaggagggtgtcacaagttgtgaatgcccttcttgtcatgggttaatctg 26104366  T
Q  506 tgcacaatgtaaagttccatggcactcagatatggattgtcaggaatttatggatgaaaaacatatggatatgaaatttttggagttggctaaaagagaa 605  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26104367 tgcacaatgtaaagttccatggcactcagatatgaattgtcaggaatttatggatgaaaaacatatggatatgaaatttttggagttggctaaaagagaa 26104466  T
Q  606 aaatggcagagatgtccatgatg 628  Q
    |||||||||||||||||| ||||    
T  26104467 aaatggcagagatgtccaagatg 26104489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 468 - 623
Target Start/End: Complemental strand, 33532382 - 33532218
Alignment:
Q  468 acaagttgtgaatgcccttcttgtcatgggttaatctgtgcacaatgtaaagttccatggcactcagatatggattgtcaggaattt---------atgg 558  Q
    ||||||||||||||| ||||||||||| ||||| | ||||  ||||||||||||||||||||| |||||||| |||||| | |||||         |||     
T  33532382 acaagttgtgaatgctcttcttgtcataggttattttgtgtgcaatgtaaagttccatggcacacagatatgaattgtcggcaatttcagaagtcaatgt 33532283  T
Q  559 atgaaaaacatatggatatgaaatttttggagttggctaaaagagaaaaatggcagagatgtcca 623  Q
     |||||| ||  |||||| ||| |||||| ||||||||||||||||||| |||||||||||||||    
T  33532282 ctgaaaaccagttggataagaattttttgaagttggctaaaagagaaaagtggcagagatgtcca 33532218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 285 - 415
Target Start/End: Complemental strand, 33532541 - 33532411
Alignment:
Q  285 gaactgaaaccagaaactttgcaatattttttacctaaaaaagttattgctgattgggaatatgcaatttttgagtcttctatttctacaaagcaaatat 384  Q
    |||||||||||||||  |||||||||  |||||||||||||| | |||| ||||||||||| |||||  | ||||  ||||||||||   ||| | | |     
T  33532541 gaactgaaaccagaacatttgcaatacattttacctaaaaaaatcattgttgattgggaatctgcaaactgtgagaattctatttctttgaaggacaaaa 33532442  T
Q  385 tttactgcccttacaataattgttctctttt 415  Q
    ||||||| ||||| || ||||||||||||||    
T  33532441 tttactgtccttataacaattgttctctttt 33532411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 81 - 155
Target Start/End: Complemental strand, 33532743 - 33532672
Alignment:
Q  81 aaaacaaacactgttacggaacaaggtgaatcctcgaaaagctttaactgcggtatatgctttgattctgtaaca 155  Q
    |||||||| || ||||  ||||||||| ||||||| |||| |||   ||| ||||||||||||||||||||||||    
T  33532743 aaaacaaagacagttatagaacaaggtcaatcctcaaaaatctt---ctgtggtatatgctttgattctgtaaca 33532672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 86; Significance: 9e-41; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 102 - 415
Target Start/End: Original strand, 25027012 - 25027325
Alignment:
Q  102 caaggtgaatcctcgaaaagctttaactgcggtatatgctttgattctgtaacatatactagtttgttcacagctagttcatgcaatcatctattttgta 201  Q
    |||||| |||||||||||||||| | ||| ||||||||||||||||||||||||    |||   |||||||| | ||||||||||||||||  |||||||    
T  25027012 caaggtcaatcctcgaaaagcttcagctgtggtatatgctttgattctgtaacagtctctaaaatgttcacaacaagttcatgcaatcatcccttttgta 25027111  T
Q  202 ctaattgcatatccaagtatgtggctgttgaaagagagaaagatgtggtgaaagtgaattgtccggagccggaatgtactgtggaactgaaaccagaaac 301  Q
    ||||||||||||||| |||||||| |||| | ||| |  || | ||||||||| | ||||||||  | || || ||| ||||||||||||||||||||      
T  25027112 ctaattgcatatccatgtatgtggatgttcagagaaaagaaaacgtggtgaaactaaattgtccaaatccagattgttctgtggaactgaaaccagaaca 25027211  T
Q  302 tttgcaatattttttacctaaaaaagttattgctgattgggaatatgcaatttttgagtcttctatttctacaaagcaaatattttactgcccttacaat 401  Q
    | || |||   || |||||||| |||| |||| ||| ||||||| |||||||| ||| ||||||||| |||  | ||||| | | |||||||||||  |     
T  25027212 tgtggaatccattatacctaaacaagtcattgttgaatgggaatctgcaatttatgaatcttctattgctatgatgcaaaaaatgtactgcccttatgag 25027311  T
Q  402 aattgttctctttt 415  Q
    ||||||||||||||    
T  25027312 aattgttctctttt 25027325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 61 - 415
Target Start/End: Original strand, 25014134 - 25014485
Alignment:
Q  61 agccagaagaagaaacaaacaaaacaaacactgttacggaacaaggtgaatcctcgaaaagctttaactgcggtatatgctttgattctgtaacatatac 160  Q
    |||||||| |||| | || ||||||||| || | ||  ||||||||| ||||||| |||| || |   || |||||||||||||||||||||||| |  |    
T  25014134 agccagaaaaagataaaagcaaaacaaagacagctatagaacaaggtcaatcctctaaaatctgt---tgtggtatatgctttgattctgtaacaaactc 25014230  T
Q  161 tagtttgttcacagctagttcatgcaatcatctattttgtactaattgcatatccaagtatgtggctgttgaaagagagaaagatgtggtgaaagtgaat 260  Q
    || | ||||  || |  ||| |||||||||||  ||||||||||| ||||||||||||||||||    |||||| | |  || | ||||| ||| | ||     
T  25014231 taatatgttttcaaccggtttatgcaatcatcccttttgtactaagtgcatatccaagtatgtgaagattgaaataaaagaaaaagtggttaaaatcaag 25014330  T
Q  261 tgtccggagccggaatgtactgtggaactgaaaccagaaactttgcaatattttttacctaaaaaagttattgctgattgggaatatgcaatttttgagt 360  Q
    |||||||| || |||||| |||| ||||| |||||||||  ||||||||   |||||||||||||| | |||| ||||||||||| |||||  |  |||     
T  25014331 tgtccggatccagaatgttctgttgaactcaaaccagaacatttgcaatgcattttacctaaaaaaatcattgttgattgggaatctgcaaactgcgagg 25014430  T
Q  361 cttctatttctacaaagcaaatattttactgcccttacaataattgttctctttt 415  Q
    |||| ||| ||   ||| ||| ||||||||| |||||||| ||||||||||||||    
T  25014431 cttccattgctttgaaggaaaaattttactgtccttacaagaattgttctctttt 25014485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 178 - 368
Target Start/End: Complemental strand, 24972120 - 24971929
Alignment:
Q  178 gttcatgcaatcatctattttgtactaattgcatatccaagtatgtggctgttgaaagagagaaagatgtggtgaaagtgaattgtccggagccggaatg 277  Q
    ||||||||||||| |  ||||||||||| |||||||||||| ||| |   ||| ||||| |  || |  ||||||||||||| |||||||| || |||||    
T  24972120 gttcatgcaatcaccccttttgtactaagtgcatatccaagaatgcgaaagttcaaagaaaagaaaaaatggtgaaagtgaagtgtccggatccagaatg 24972021  T
Q  278 tactgtggaactgaaaccagaaactttgcaatattttttacct-aaaaaagttattgctgattgggaatatgcaatttttgagtcttctatt 368  Q
    | |||| |||||||||||||||  |||||||    |||||||| |||||||| |||| ||||||||||| |||||||| |||||||||||||    
T  24972020 ttctgttgaactgaaaccagaacatttgcaacccattttacctaaaaaaagtcattgttgattgggaatctgcaatttatgagtcttctatt 24971929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 468 - 554
Target Start/End: Original strand, 25013396 - 25013482
Alignment:
Q  468 acaagttgtgaatgcccttcttgtcatgggttaatctgtgcacaatgtaaagttccatggcactcagatatggattgtcaggaattt 554  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||| || ||||| ||||||| ||||||    
T  25013396 acaagttgtgaatgcccttcttgtcataggttattctgtgcacaatgtaaagttccgtggcacgcaaatatgaattgtcaagaattt 25013482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 61 - 415
Target Start/End: Original strand, 24990597 - 24990948
Alignment:
Q  61 agccagaagaagaaacaaacaaaacaaacactgttacggaacaaggtgaatcctcgaaaagctttaactgcggtatatgctttgattctgtaacatatac 160  Q
    |||||||| |||| | || ||||||||| || | ||  ||||||||| ||||||| |||| || |   || |||||||||||||||||||||||| |  |    
T  24990597 agccagaaaaagataaaagcaaaacaaagacagctatagaacaaggtcaatcctctaaaatctgt---tgtggtatatgctttgattctgtaacaaactc 24990693  T
Q  161 tagtttgttcacagctagttcatgcaatcatctattttgtactaattgcatatccaagtatgtggctgttgaaagagagaaagatgtggtgaaagtgaat 260  Q
    || | ||||  || |  ||| |||||||||||  ||||||||||| ||||||||||||||||||    || ||| | |  || | ||||| ||| | ||     
T  24990694 taatatgttttcaaccggtttatgcaatcatcccttttgtactaagtgcatatccaagtatgtgaagatttaaataaaagaaaaagtggttaaaatcaag 24990793  T
Q  261 tgtccggagccggaatgtactgtggaactgaaaccagaaactttgcaatattttttacctaaaaaagttattgctgattgggaatatgcaatttttgagt 360  Q
    |||||||| || |||||| |||| ||||| |||||||||  ||||||||   |||||||||||||| | |||| ||||||||||| |||||  |  |||     
T  24990794 tgtccggatccagaatgttctgttgaactcaaaccagaacatttgcaatgcattttacctaaaaaaatcattgttgattgggaatctgcaaactgcgagg 24990893  T
Q  361 cttctatttctacaaagcaaatattttactgcccttacaataattgttctctttt 415  Q
    |||| ||| ||   ||| ||| ||||||||| |||||||| ||||||||||||||    
T  24990894 cttccattgctttgaaggaaaaattttactgtccttacaagaattgttctctttt 24990948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 471 - 554
Target Start/End: Original strand, 24990983 - 24991066
Alignment:
Q  471 agttgtgaatgcccttcttgtcatgggttaatctgtgcacaatgtaaagttccatggcactcagatatggattgtcaggaattt 554  Q
    |||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||  | ||||| ||||||| ||||||    
T  24990983 agttgtgaatgcccttattgtcataggttattctgtgcacaatgtaaagttccatggcacggaaatatgaattgtcaagaattt 24991066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 474 - 554
Target Start/End: Original strand, 25014523 - 25014603
Alignment:
Q  474 tgtgaatgcccttcttgtcatgggttaatctgtgcacaatgtaaagttccatggcactcagatatggattgtcaggaattt 554  Q
    ||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||  | ||||| ||||||| ||||||    
T  25014523 tgtgaatgcccttattgtcataggttattctgtgcacaatgtaaagttccatggcacggaaatatgaattgtcaagaattt 25014603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 459 - 529
Target Start/End: Original strand, 25017871 - 25017941
Alignment:
Q  459 gagggtgtcacaagttgtgaatgcccttcttgtcatgggttaatctgtgcacaatgtaaagttccatggca 529  Q
    |||||||| |||||||||||||| |||||||||||| || || |||||||||||||| |||||||||||||    
T  25017871 gagggtgttacaagttgtgaatgtccttcttgtcataggctattctgtgcacaatgtgaagttccatggca 25017941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 459 - 554
Target Start/End: Complemental strand, 24971862 - 24971767
Alignment:
Q  459 gagggtgtcacaagttgtgaatgcccttcttgtcatgggttaatctgtgcacaatgtaaagttccatggcactcagatatggattgtcaggaattt 554  Q
    |||||||| |||||||||||||| || ||||||||| || |  |||||| ||||||||| |||||||||||| |||||| | |||| | |||||||    
T  24971862 gagggtgttacaagttgtgaatgtccgtcttgtcataggctcttctgtgtacaatgtaacgttccatggcacgcagataagaattgccgggaattt 24971767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 578 - 622
Target Start/End: Original strand, 25027482 - 25027526
Alignment:
Q  578 gaaatttttggagttggctaaaagagaaaaatggcagagatgtcc 622  Q
    ||||||||||||||||||||| || ||||||||||||||||||||    
T  25027482 gaaatttttggagttggctaatagtgaaaaatggcagagatgtcc 25027526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 459 - 550
Target Start/End: Original strand, 25027345 - 25027436
Alignment:
Q  459 gagggtgtcacaagttgtgaatgcccttcttgtcatgggttaatctgtgcacaatgtaaagttccatggcactcagatatggattgtcagga 550  Q
    |||| ||| |||||||||||||| || ||||||||| || |  | |||||||||||||||||||| |||||  || ||||| ||||||||||    
T  25027345 gaggttgttacaagttgtgaatgtccatcttgtcataggctgttttgtgcacaatgtaaagttccgtggcatacaaatatgaattgtcagga 25027436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 573 - 623
Target Start/End: Original strand, 24991103 - 24991153
Alignment:
Q  573 gatatgaaatttttggagttggctaaaagagaaaaatggcagagatgtcca 623  Q
    |||| ||| |||||||||||||||||||||||||| ||| |||||||||||    
T  24991103 gataggaagtttttggagttggctaaaagagaaaagtggaagagatgtcca 24991153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 573 - 623
Target Start/End: Original strand, 25014640 - 25014690
Alignment:
Q  573 gatatgaaatttttggagttggctaaaagagaaaaatggcagagatgtcca 623  Q
    |||| ||| |||||||||||||||||||||||||| ||| |||||||||||    
T  25014640 gataggaagtttttggagttggctaaaagagaaaagtggaagagatgtcca 25014690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 571 - 606
Target Start/End: Complemental strand, 21788030 - 21787995
Alignment:
Q  571 tggatatgaaatttttggagttggctaaaagagaaa 606  Q
    ||||||||||||||||||||||||| ||||||||||    
T  21788030 tggatatgaaatttttggagttggcaaaaagagaaa 21787995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 573 - 623
Target Start/End: Original strand, 25013519 - 25013569
Alignment:
Q  573 gatatgaaatttttggagttggctaaaagagaaaaatggcagagatgtcca 623  Q
    |||| ||| |||||||||||||||||||||||||| ||| | |||||||||    
T  25013519 gataggaagtttttggagttggctaaaagagaaaagtggaaaagatgtcca 25013569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 622
Target Start/End: Original strand, 25036519 - 25036568
Alignment:
Q  573 gatatgaaatttttggagttggctaaaagagaaaaatggcagagatgtcc 622  Q
    |||| |||||||||||||||||  |||||||||  |||||||||||||||    
T  25036519 gataggaaatttttggagttggtcaaaagagaatcatggcagagatgtcc 25036568  T

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Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 571 - 623
Target Start/End: Complemental strand, 21794733 - 21794681
Alignment:
Q  571 tggatatgaaatttttggagttggctaaaagagaaaaatggcagagatgtcca 623  Q
    |||||| |||||||||||||||||| ||||||||||  ||| | |||||||||    
T  21794733 tggataagaaatttttggagttggcaaaaagagaaaggtggaaaagatgtcca 21794681  T

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Target: chr2 (Bit Score: 57; Significance: 2e-23; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 468 - 623
Target Start/End: Original strand, 16868965 - 16869129
Alignment:
Q  468 acaagttgtgaatgcccttcttgtcatgggttaatctgtgcacaatgtaaagttccatggcactcagatatggattgtcaggaattt---------atgg 558  Q
    ||||||||||||||| ||||||||||| ||||| | ||||  ||||||||||||||||||||| |||||||| |||||| | |||||         |||     
T  16868965 acaagttgtgaatgctcttcttgtcataggttattttgtgtgcaatgtaaagttccatggcacacagatatgaattgtcggcaatttcagaagtcaatgt 16869064  T
Q  559 atgaaaaacatatggatatgaaatttttggagttggctaaaagagaaaaatggcagagatgtcca 623  Q
     |||||| ||  |||||| ||| |||||| ||||||||||||||||||| |||||||||||||||    
T  16869065 ctgaaaaccagttggataagaattttttgaagttggctaaaagagaaaagtggcagagatgtcca 16869129  T

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Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 285 - 415
Target Start/End: Original strand, 16868806 - 16868936
Alignment:
Q  285 gaactgaaaccagaaactttgcaatattttttacctaaaaaagttattgctgattgggaatatgcaatttttgagtcttctatttctacaaagcaaatat 384  Q
    |||||||||||||||  |||||||||  |||||||||||||| | |||| ||||||||||| |||||  | ||||  ||||||||||   ||| | | |     
T  16868806 gaactgaaaccagaacatttgcaatacattttacctaaaaaaatcattgttgattgggaatctgcaaactgtgagaattctatttctttgaaggacaaaa 16868905  T
Q  385 tttactgcccttacaataattgttctctttt 415  Q
    ||||||| ||||| || ||||||||||||||    
T  16868906 tttactgtccttataacaattgttctctttt 16868936  T

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Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 81 - 155
Target Start/End: Original strand, 16868604 - 16868675
Alignment:
Q  81 aaaacaaacactgttacggaacaaggtgaatcctcgaaaagctttaactgcggtatatgctttgattctgtaaca 155  Q
    |||||||| || ||||  ||||||||| ||||||| |||| |||   ||| ||||||||||||||||||||||||    
T  16868604 aaaacaaagacagttatagaacaaggtcaatcctcaaaaatctt---ctgtggtatatgctttgattctgtaaca 16868675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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