View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17391_low_6 (Length: 232)
Name: NF17391_low_6
Description: NF17391
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17391_low_6 |
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Alignment Details
Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 2505055 - 2505267
Alignment:
| Q |
1 |
accagactctcataccacaggttcataaacaacatagattcaaagatagtttttggttacttgtaagtttgtaacctctttcaatctacttgcagctaac |
100 |
Q |
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| T |
2505055 |
accagactctcataccacaggttcataaacaacatagattcaaagatagtttttggttacttgtaagtttgtaacctctttcaatctacttgcagctaac |
2505154 |
T |
|
| Q |
101 |
ttctattaaactgatatgcaggtacagtgtcagaacagaaactgtccatcaaataagcttgtttttccattgatggcactactagcaggaatgttaggtg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2505155 |
ttctattaaactgatatgcaggtacagtgtcagaacagaaattgtccatcaaataagcttgtttttccattgatggcactactagcaggaatgttaggtg |
2505254 |
T |
|
| Q |
201 |
gtgtttttggaat |
213 |
Q |
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||||||||||||| |
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| T |
2505255 |
gtgtttttggaat |
2505267 |
T |
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