View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1739_high_3 (Length: 746)

Name: NF1739_high_3
Description: NF1739
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1739_high_3
NF1739_high_3
[»] chr4 (20 HSPs)
chr4 (17-738)||(54778921-54779628)
chr4 (17-474)||(54789784-54790224)
chr4 (17-473)||(52282415-52282881)
chr4 (263-297)||(843150-843184)
chr4 (566-604)||(35780565-35780603)
chr4 (490-524)||(54789722-54789756)
chr4 (566-611)||(1105450-1105495)
chr4 (566-611)||(10431444-10431489)
chr4 (566-611)||(37514577-37514622)
chr4 (566-611)||(38209843-38209888)
chr4 (566-611)||(55255099-55255144)
chr4 (566-606)||(9579476-9579516)
chr4 (566-606)||(9585171-9585211)
chr4 (566-604)||(5128992-5129030)
chr4 (566-611)||(17679236-17679281)
chr4 (566-611)||(27596641-27596686)
chr4 (566-599)||(35463960-35463993)
chr4 (566-611)||(45560706-45560751)
chr4 (566-611)||(47128000-47128045)
chr4 (566-611)||(48208469-48208514)
[»] chr8 (9 HSPs)
chr8 (133-474)||(19295825-19296149)
chr8 (566-611)||(45472210-45472255)
chr8 (490-524)||(19295763-19295797)
chr8 (566-611)||(2952474-2952519)
chr8 (566-611)||(3048775-3048820)
chr8 (566-611)||(5860997-5861042)
chr8 (566-611)||(20003878-20003923)
chr8 (566-611)||(30883129-30883174)
chr8 (267-297)||(3556317-3556347)
[»] chr6 (13 HSPs)
chr6 (263-325)||(22745526-22745588)
chr6 (566-611)||(19741225-19741270)
chr6 (566-611)||(23070891-23070936)
chr6 (566-611)||(24711144-24711189)
chr6 (566-606)||(21280352-21280392)
chr6 (263-298)||(6074043-6074078)
chr6 (263-298)||(6074529-6074564)
chr6 (267-301)||(585725-585759)
chr6 (566-604)||(27314773-27314811)
chr6 (566-611)||(12083642-12083687)
chr6 (566-611)||(13727651-13727696)
chr6 (566-611)||(21479303-21479348)
chr6 (566-611)||(30832669-30832714)
[»] chr1 (11 HSPs)
chr1 (566-605)||(5027982-5028021)
chr1 (566-611)||(3406342-3406387)
chr1 (566-611)||(3440433-3440478)
chr1 (566-611)||(14146224-14146269)
chr1 (566-611)||(23181730-23181775)
chr1 (566-611)||(27906950-27906995)
chr1 (566-611)||(44655558-44655603)
chr1 (566-606)||(41697286-41697326)
chr1 (566-611)||(6771715-6771760)
chr1 (566-611)||(6888488-6888533)
chr1 (566-611)||(10912096-10912141)
[»] scaffold0070 (1 HSPs)
scaffold0070 (566-611)||(1030-1075)
[»] chr5 (12 HSPs)
chr5 (566-611)||(31881592-31881637)
chr5 (566-611)||(15480231-15480276)
chr5 (566-611)||(19523112-19523157)
chr5 (566-611)||(30853285-30853330)
chr5 (566-611)||(34756616-34756661)
chr5 (263-298)||(9895163-9895198)
chr5 (263-306)||(10392914-10392957)
chr5 (263-298)||(15086714-15086749)
chr5 (566-596)||(33046398-33046428)
chr5 (566-611)||(2274817-2274862)
chr5 (267-308)||(4991144-4991185)
chr5 (566-611)||(36188021-36188066)
[»] chr3 (21 HSPs)
chr3 (566-611)||(3954854-3954899)
chr3 (566-611)||(13795206-13795251)
chr3 (263-304)||(18268007-18268048)
chr3 (566-611)||(27078820-27078865)
chr3 (566-611)||(27084617-27084662)
chr3 (566-611)||(36605865-36605910)
chr3 (566-611)||(36716277-36716322)
chr3 (566-611)||(38681349-38681394)
chr3 (566-611)||(53149459-53149504)
chr3 (566-611)||(54619455-54619500)
chr3 (566-606)||(1148361-1148401)
chr3 (263-299)||(21768622-21768658)
chr3 (263-302)||(5457224-5457263)
chr3 (267-306)||(28525028-28525067)
chr3 (566-611)||(42098717-42098762)
chr3 (566-611)||(47467600-47467645)
chr3 (263-304)||(47542551-47542592)
chr3 (263-304)||(47542770-47542811)
chr3 (263-304)||(47542989-47543030)
chr3 (263-304)||(47556436-47556477)
chr3 (566-611)||(50258736-50258781)
[»] chr2 (13 HSPs)
chr2 (263-306)||(21186631-21186674)
chr2 (566-611)||(3155022-3155067)
chr2 (566-611)||(3952918-3952963)
chr2 (566-611)||(6964811-6964856)
chr2 (566-611)||(7162696-7162741)
chr2 (263-301)||(26144328-26144366)
chr2 (566-611)||(4505698-4505743)
chr2 (566-611)||(12337691-12337736)
chr2 (267-324)||(25384480-25384537)
chr2 (566-611)||(34693166-34693211)
chr2 (566-611)||(34715578-34715623)
chr2 (265-326)||(35198211-35198272)
chr2 (267-304)||(37232156-37232193)
[»] chr7 (6 HSPs)
chr7 (566-611)||(12596431-12596476)
chr7 (566-611)||(18777020-18777065)
chr7 (566-611)||(28749600-28749645)
chr7 (263-299)||(20204255-20204291)
chr7 (265-306)||(8093842-8093883)
chr7 (646-683)||(28749682-28749719)


Alignment Details
Target: chr4 (Bit Score: 549; Significance: 0; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 549; E-Value: 0
Query Start/End: Original strand, 17 - 738
Target Start/End: Original strand, 54778921 - 54779628
Alignment:
Q  17 acatgcattgtgcacagtttagaaatacaaattcagaacatataaggaaaactacagccatgcatgaagcagagttacatcaaaatgcactacttattaa 116  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54778921 acatgcattgtgcacagtttacaaatacaaattcagaacatataaggaaaactacagccatgcatgaagcagagttacatcaaaatgcactacttattaa 54779020  T
Q  117 aaatatagattcaataacatgcactctcccaaaagaaataccacacacaactaaataactaaaaattgttagaaaacagtctgctagtagttgaaagaaa 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  54779021 aaatatagattcaataacatgcactctcccaaaagaaataccacacacaactaaataactaaaaattgttagaaaacagtctgctagtaattgaaagaaa 54779120  T
Q  217 gctatgaaacactgacacaaacactgcagatgacatagacacatcatgagaaaatgaattatttgaacgtaatcacatgtgtcagtgtcatgttagtgtc 316  Q
    ||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54779121 gctatgaaacactgacactgacactgcacatgacatagacacatcatgagaaaatgaattatttgaacgtaatcacatgtgtcagtgtcatgttagtgtc 54779220  T
Q  317 cgacaccgaccgacaagtgtgggacacgcctttgatcagaggtgtgtgccacaaagaaagaaagaccggttgaaactaggcaaaataataatatacaaat 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||   ||  |||||||||||||    
T  54779221 cgacaccgaccgacaagtgtgggacacgcctttgatcagaggtgtgtgccacaaagaaagaaagactggttgaaactagg---aaacataatatacaaat 54779317  T
Q  417 aaaagaccttataatactctagttcctatcacaaaaatgcagagctaagaatgggaaggaatnnnnnnncagcatttaaactttcacacataggtattca 516  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||    
T  54779318 aaaagaccttataatactctagttcctatcacaaaaatgcagagctaagaatgggaaggaataaaaaaacagcatttaaactttcacacataggtattca 54779417  T
Q  517 actaaaaaccacttgtgtataaccaggcccggccctgagggggtgcaaagtgcaaacagctcaaccgagctgggcctcccccaaggatggacctcnnnnn 616  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||          
T  54779418 actaaaaaccacttgtgtataaccaggcccggccctgaggg-------agtgcaaacagctcaaccgagctgggcctcccccaaggatggacct----aa 54779506  T
Q  617 nnnnnnnnnnntatgtccagtagtataccatcctccaataaaaaataataattatttcatgccctcaccaattcgtcgctcactcgctaatcactactca 716  Q
               |||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  54779507 aaaaaaaaaaatatgcccagtagtataccatcctccaataaaaaaaaaaaattatttcatgccctcaccaattcgtcgctcactcgctcatcactactca 54779606  T
Q  717 atactcatcactgatattcttc 738  Q
    ||||||||||| ||| ||||||    
T  54779607 atactcatcaccgattttcttc 54779628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 277; E-Value: 1e-154
Query Start/End: Original strand, 17 - 474
Target Start/End: Complemental strand, 54790224 - 54789784
Alignment:
Q  17 acatgcattgtgcacagtttagaaatacaaattcagaacatataaggaaaactacagccatgcatgaagcagagttacatcaaaatgcactacttattaa 116  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54790224 acatgcattgtgcacagtttacaaatacaaattcagaacatataaggaaaactacagccatgcatgaagcagagttacatcaaaatgcactacttattaa 54790125  T
Q  117 aaatatagattcaataacatgcactctcccaaaagaaataccacacacaactaaataactaaaaattgttagaaaacagtctgctagtagttgaaagaaa 216  Q
    ||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| | || ||||||||||    
T  54790124 aaatatagattcaatgacatgcactctcgcaaaagaaaaaccacacacaactaaataactaaaaattgttagaatacagtctgcaaataattgaaagaaa 54790025  T
Q  217 gctatgaaacactgacacaaacactgcagatgacatagacacatcatgagaaaatgaattatttgaacgtaatcacatgtgtcagtgtcatgttagtgtc 316  Q
    |||||||||||||   ||| |||||  | |  |||||||||||| ||||||| ||||||||||||||||||| ||||||||||| |||| |||||||||     
T  54790024 gctatgaaacact--aacagacacttgacacaacatagacacataatgagaacatgaattatttgaacgtaaccacatgtgtcaatgtcgtgttagtgtt 54789927  T
Q  317 cgacaccgaccgacaagtgtgggacacgcctttgatcagaggtgt--gtgccacaaagaaagaaagaccggttgaaactaggcaaaataataatatacaa 414  Q
     ||||||||||||| |||                |||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  54789926 ggacaccgaccgac-agt----------------atcagaggtgttggtgccacaaagaaagaaagactggttgaaactaggcaaaataataatatacaa 54789844  T
Q  415 ataaaagaccttataatactctagttcctatcacaaaaatgcagagctaagaatgggaag 474  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  54789843 ataaaagaccttataataccctagttcctatcacaaaaatgcagagctaagaataggaag 54789784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 17 - 473
Target Start/End: Complemental strand, 52282881 - 52282415
Alignment:
Q  17 acatgcattgtgcacagtttagaaatacaaattcagaacatataaggaaaactacagccatgcatgaagcagagttacatcaaaatgcactacttattaa 116  Q
    |||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    ||| |||||||||||    
T  52282881 acatgcattgtgcacaatatacaaatacaaattcagaacatataaggaaaactacagccatgcatgaagcagagatacatcg---tgcgctacttattaa 52282785  T
Q  117 aaatatagattcaataacatgcactctcc---caaaagaaataccacacacaactaaataactaaaaattgttagaaaacagtctgctagtagttgaaag 213  Q
    ||||||||||||| |||||||||||||||   ||||||||| |||||||||||||||||||||||||||||||| || ||||||||||  || |||||||    
T  52282784 aaatatagattcagtaacatgcactctcctcccaaaagaaaaaccacacacaactaaataactaaaaattgttaaaatacagtctgcttctaattgaaag 52282685  T
Q  214 aaagctatgaaacactgacacaaacactgcagatgacatagacacatcat-gagaaaatgaattatttgaacgtaatcacatgtgtcagtgtcatgttag 312  Q
    |||||||||||||||||||| |||||||| | | ||||||||||| |||| |||| || |||||||||| || ||||||||||||||||| || ||||||    
T  52282684 aaagctatgaaacactgacataaacactggacacgacatagacacgtcatggagagaacgaattatttgtacataatcacatgtgtcagtttcgtgttag 52282585  T
Q  313 tgtccgacaccgaccgacaagtgtggg-------acacgcctttgatcagaggtgt--gtgccacaaagaaagaaagaccggttgaaactaggcaaaata 403  Q
    |||||||||||||||||||||||||||       ||||||||||||||||||||||  |||||||| || ||||||||| ||||||||||||| ||||||    
T  52282584 tgtccgacaccgaccgacaagtgtgggacactgaacacgcctttgatcagaggtgttggtgccacagagtaagaaagactggttgaaactaggaaaaata 52282485  T
Q  404 ataatatacaaataaaagaccttataatactctagttcctatcacaaaaatgcagagctaagaatgggaa 473  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||||||    
T  52282484 ataatatacaaataaaagaccttataataccctagttgctatcacaaaaatgcagagctaggaatgggaa 52282415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 263 - 297
Target Start/End: Complemental strand, 843184 - 843150
Alignment:
Q  263 tgagaaaatgaattatttgaacgtaatcacatgtg 297  Q
    |||||||||||||||||||||||||||||||||||    
T  843184 tgagaaaatgaattatttgaacgtaatcacatgtg 843150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 566 - 604
Target Start/End: Complemental strand, 35780603 - 35780565
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggat 604  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  35780603 gtgcaaacagctcaaccgagctgggcctcccccacggat 35780565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 490 - 524
Target Start/End: Complemental strand, 54789756 - 54789722
Alignment:
Q  490 atttaaactttcacacataggtattcaactaaaaa 524  Q
    |||||||||||||||||||||||||||||||||||    
T  54789756 atttaaactttcacacataggtattcaactaaaaa 54789722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 611
Target Start/End: Original strand, 1105450 - 1105495
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  1105450 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctc 1105495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 611
Target Start/End: Complemental strand, 10431489 - 10431444
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  10431489 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctc 10431444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 611
Target Start/End: Original strand, 37514577 - 37514622
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| |||||||||||||| |||||||||| ||||    
T  37514577 gtgcaaacagctcaaacgagctgggcctcctccaaggatgggcctc 37514622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 611
Target Start/End: Complemental strand, 38209888 - 38209843
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  38209888 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctc 38209843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 611
Target Start/End: Original strand, 55255099 - 55255144
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  55255099 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctc 55255144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 566 - 606
Target Start/End: Complemental strand, 9579516 - 9579476
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatgg 606  Q
    ||||||||||||||| ||||||||||||||| |||||||||    
T  9579516 gtgcaaacagctcaaacgagctgggcctccctcaaggatgg 9579476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 566 - 606
Target Start/End: Complemental strand, 9585211 - 9585171
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatgg 606  Q
    ||||||||||||||| ||||||||||||||| |||||||||    
T  9585211 gtgcaaacagctcaaacgagctgggcctccctcaaggatgg 9585171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 566 - 604
Target Start/End: Complemental strand, 5129030 - 5128992
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggat 604  Q
    ||||||||||||||| ||||||||||||||| |||||||    
T  5129030 gtgcaaacagctcaaacgagctgggcctccctcaaggat 5128992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 566 - 611
Target Start/End: Original strand, 17679236 - 17679281
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||| ||||||| ||||||||| ||||    
T  17679236 gtgcaaacagctcaaacgagctgagcctccctcaaggatgggcctc 17679281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 566 - 611
Target Start/End: Complemental strand, 27596686 - 27596641
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    |||| |||||||||| ||||||||||||||||| ||||||| ||||    
T  27596686 gtgcgaacagctcaaacgagctgggcctcccccgaggatgggcctc 27596641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 566 - 599
Target Start/End: Original strand, 35463960 - 35463993
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctccccca 599  Q
    |||||||||||||||| |||||||||||||||||    
T  35463960 gtgcaaacagctcaacagagctgggcctccccca 35463993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 566 - 611
Target Start/End: Complemental strand, 45560751 - 45560706
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||| ||| ||||| ||||    
T  45560751 gtgcaaacagctcaaacgagctgggcctccctcaaagatgggcctc 45560706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 566 - 611
Target Start/End: Original strand, 47128000 - 47128045
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||| ||| ||||||||||||||| ||||||||| ||||    
T  47128000 gtgcaaacagcccaaacgagctgggcctccctcaaggatgggcctc 47128045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 566 - 611
Target Start/End: Original strand, 48208469 - 48208514
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| |||| |||||||||| ||||||||| ||||    
T  48208469 gtgcaaacagctcaaacgagttgggcctccctcaaggatgggcctc 48208514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 169; Significance: 3e-90; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 133 - 474
Target Start/End: Complemental strand, 19296149 - 19295825
Alignment:
Q  133 acatgcactctcccaaaagaaataccacacacaactaaataactaaaaattgttagaaaacagtctgctagtagttgaaagaaagctatgaaacactgac 232  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| | || ||||||||||||||||||||||| ||    
T  19296149 acatgcactctcgcaaaagaaaaaccacacacaactaaataactaaaaattgttagaatacagtctgcaaataattgaaagaaagctatgaaacactaac 19296050  T
Q  233 acaaacactgcagatgacatagacacatcatgagaaaatgaattatttgaacgtaatcacatgtgtcagtgtcatgttagtgtccgacaccgaccgacaa 332  Q
    | |  ||||  | |  |||||||||||| ||||||| ||||||||||||||||||| ||||||||||| |||| |||||||||  ||||||||||||||     
T  19296049 aga--cacttgacacaacatagacacataatgagaacatgaattatttgaacgtaaccacatgtgtcaatgtcgtgttagtgttggacaccgaccgaca- 19295953  T
Q  333 gtgtgggacacgcctttgatcagaggtgt--gtgccacaaagaaagaaagaccggttgaaactaggcaaaataataatatacaaataaaagaccttataa 430  Q
      ||              |||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19295952 --gt--------------atcagaggtgttggtgccacaaagaaagaaagactggttgaaactaggcaaaataataatatacaaataaaagaccttataa 19295869  T
Q  431 tactctagttcctatcacaaaaatgcagagctaagaatgggaag 474  Q
    ||| |||||||||||||||||||||||||||||||||| |||||    
T  19295868 taccctagttcctatcacaaaaatgcagagctaagaataggaag 19295825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 566 - 611
Target Start/End: Original strand, 45472210 - 45472255
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||    
T  45472210 gtgcaaacagctcaaccgagctgggccacccccaaggatgggcctc 45472255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 490 - 524
Target Start/End: Complemental strand, 19295797 - 19295763
Alignment:
Q  490 atttaaactttcacacataggtattcaactaaaaa 524  Q
    |||||||||||||||||||||||||||||||||||    
T  19295797 atttaaactttcacacataggtattcaactaaaaa 19295763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 611
Target Start/End: Complemental strand, 2952519 - 2952474
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  2952519 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctc 2952474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 611
Target Start/End: Complemental strand, 3048820 - 3048775
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  3048820 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctc 3048775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 611
Target Start/End: Complemental strand, 5861042 - 5860997
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  5861042 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctc 5860997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 611
Target Start/End: Complemental strand, 20003923 - 20003878
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  20003923 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctc 20003878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 611
Target Start/End: Original strand, 30883129 - 30883174
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  30883129 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctc 30883174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 267 - 297
Target Start/End: Original strand, 3556317 - 3556347
Alignment:
Q  267 aaaatgaattatttgaacgtaatcacatgtg 297  Q
    |||||||||||||||||||||||||||||||    
T  3556317 aaaatgaattatttgaacgtaatcacatgtg 3556347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 263 - 325
Target Start/End: Complemental strand, 22745588 - 22745526
Alignment:
Q  263 tgagaaaatgaattatttgaacgtaatcacatgtgtcagtgtcatgttagtgtccgacaccga 325  Q
    |||||||||||||||||| |||||||| |||||| ||||||||||||| ||||| ||||||||    
T  22745588 tgagaaaatgaattatttaaacgtaatgacatgtttcagtgtcatgttggtgtcggacaccga 22745526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 566 - 611
Target Start/End: Complemental strand, 19741270 - 19741225
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||    
T  19741270 gtgcaaacagctcaaacgagctgggcctccctcaaggatggacctc 19741225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 611
Target Start/End: Complemental strand, 23070936 - 23070891
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  23070936 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctc 23070891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 611
Target Start/End: Complemental strand, 24711189 - 24711144
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| | ||||||||||||||||||||||| ||||    
T  24711189 gtgcaaacagctcaaacaagctgggcctcccccaaggatgggcctc 24711144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 566 - 606
Target Start/End: Original strand, 21280352 - 21280392
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatgg 606  Q
    ||||||||||||||| ||||||||||||||| |||||||||    
T  21280352 gtgcaaacagctcaaacgagctgggcctccctcaaggatgg 21280392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 298
Target Start/End: Original strand, 6074043 - 6074078
Alignment:
Q  263 tgagaaaatgaattatttgaacgtaatcacatgtgt 298  Q
    ||||||||||||||||||||||||||||| ||||||    
T  6074043 tgagaaaatgaattatttgaacgtaatcatatgtgt 6074078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 298
Target Start/End: Original strand, 6074529 - 6074564
Alignment:
Q  263 tgagaaaatgaattatttgaacgtaatcacatgtgt 298  Q
    ||||||||||||||| ||||||||||||||||||||    
T  6074529 tgagaaaatgaattagttgaacgtaatcacatgtgt 6074564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 267 - 301
Target Start/End: Complemental strand, 585759 - 585725
Alignment:
Q  267 aaaatgaattatttgaacgtaatcacatgtgtcag 301  Q
    ||||||||||| |||||||||||||||||||||||    
T  585759 aaaatgaattaattgaacgtaatcacatgtgtcag 585725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 566 - 604
Target Start/End: Complemental strand, 27314811 - 27314773
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggat 604  Q
    ||||||||||||||| ||||||||||||||| |||||||    
T  27314811 gtgcaaacagctcaaacgagctgggcctccctcaaggat 27314773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 566 - 611
Target Start/End: Complemental strand, 12083687 - 12083642
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| |||||||||||| || ||||||||| ||||    
T  12083687 gtgcaaacagctcaaacgagctgggccttcctcaaggatgggcctc 12083642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 566 - 611
Target Start/End: Complemental strand, 13727696 - 13727651
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||| ||| ||||| ||||    
T  13727696 gtgcaaacagctcaaacgagctgggcctccctcaaagatgggcctc 13727651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 566 - 611
Target Start/End: Original strand, 21479303 - 21479348
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    |||||||||||| || ||||||||||||||| ||||||||| ||||    
T  21479303 gtgcaaacagctaaaacgagctgggcctccctcaaggatgggcctc 21479348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 566 - 611
Target Start/End: Complemental strand, 30832714 - 30832669
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    |||||||||||||||  |||||||||||||| ||||||||| ||||    
T  30832714 gtgcaaacagctcaaatgagctgggcctccctcaaggatgggcctc 30832669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 566 - 605
Target Start/End: Complemental strand, 5028021 - 5027982
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatg 605  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  5028021 gtgcaaacagctcaaccgagctgggcctcccccaaggatg 5027982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 566 - 611
Target Start/End: Original strand, 3406342 - 3406387
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  3406342 gtgcaaacagctcaaacgagctgggcctcccccaaggatgggcctc 3406387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 566 - 611
Target Start/End: Complemental strand, 3440478 - 3440433
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  3440478 gtgcaaacagctcaaacgagctgggcctcccccaaggatgggcctc 3440433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 611
Target Start/End: Original strand, 14146224 - 14146269
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  14146224 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctc 14146269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 611
Target Start/End: Original strand, 23181730 - 23181775
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||||||||||||||| ||||||| ||||| ||||    
T  23181730 gtgcaaacagctcaaccgagctgggccacccccaatgatgggcctc 23181775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 611
Target Start/End: Complemental strand, 27906995 - 27906950
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  27906995 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctc 27906950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 611
Target Start/End: Original strand, 44655558 - 44655603
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  44655558 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctc 44655603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 566 - 606
Target Start/End: Complemental strand, 41697326 - 41697286
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatgg 606  Q
    ||||||||||||||| ||||||||||||||| |||||||||    
T  41697326 gtgcaaacagctcaaacgagctgggcctccctcaaggatgg 41697286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 566 - 611
Target Start/End: Original strand, 6771715 - 6771760
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| |||||||||||||||  |||||||| ||||    
T  6771715 gtgcaaacagctcaaacgagctgggcctcccttaaggatgggcctc 6771760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 566 - 611
Target Start/End: Original strand, 6888488 - 6888533
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| |||| |||||||||| ||||||||| ||||    
T  6888488 gtgcaaacagctcaaacgagttgggcctccctcaaggatgggcctc 6888533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 566 - 611
Target Start/End: Complemental strand, 10912141 - 10912096
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    |||| |||||||||| |||||||||||||| |||||||||| ||||    
T  10912141 gtgcgaacagctcaaacgagctgggcctcctccaaggatgggcctc 10912096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 566 - 611
Target Start/End: Original strand, 1030 - 1075
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||    
T  1030 gtgcaaacagctcaaacgagctgggcctccctcaaggatggacctc 1075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000004; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 566 - 611
Target Start/End: Complemental strand, 31881637 - 31881592
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||    
T  31881637 gtgcaaacagctcaaacgagctgggcctccctcaaggatggacctc 31881592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 611
Target Start/End: Complemental strand, 15480276 - 15480231
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  15480276 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctc 15480231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 611
Target Start/End: Original strand, 19523112 - 19523157
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  19523112 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctc 19523157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 611
Target Start/End: Original strand, 30853285 - 30853330
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||  ||||||||||||||    
T  30853285 gtgcaaacagctcaaacgagctgggcctccttcaaggatggacctc 30853330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 611
Target Start/End: Complemental strand, 34756661 - 34756616
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  34756661 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctc 34756616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 298
Target Start/End: Original strand, 9895163 - 9895198
Alignment:
Q  263 tgagaaaatgaattatttgaacgtaatcacatgtgt 298  Q
    ||||||||| ||||||||||||||||||||||||||    
T  9895163 tgagaaaataaattatttgaacgtaatcacatgtgt 9895198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 306
Target Start/End: Complemental strand, 10392957 - 10392914
Alignment:
Q  263 tgagaaaatgaattatttgaacgtaatcacatgtgtcagtgtca 306  Q
    ||||||||||||||||||||||||| ||| ||||||| ||||||    
T  10392957 tgagaaaatgaattatttgaacgtactcagatgtgtcggtgtca 10392914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 298
Target Start/End: Original strand, 15086714 - 15086749
Alignment:
Q  263 tgagaaaatgaattatttgaacgtaatcacatgtgt 298  Q
    ||||||| ||||||||||||||||||||||||||||    
T  15086714 tgagaaagtgaattatttgaacgtaatcacatgtgt 15086749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 566 - 596
Target Start/End: Complemental strand, 33046428 - 33046398
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctccc 596  Q
    |||||||||||||||||||||||||||||||    
T  33046428 gtgcaaacagctcaaccgagctgggcctccc 33046398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 566 - 611
Target Start/End: Original strand, 2274817 - 2274862
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    |||||||||||||||  ||| |||||||||| ||||||||||||||    
T  2274817 gtgcaaacagctcaaatgagttgggcctccctcaaggatggacctc 2274862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 267 - 308
Target Start/End: Complemental strand, 4991185 - 4991144
Alignment:
Q  267 aaaatgaattatttgaacgtaatcacatgtgtcagtgtcatg 308  Q
    ||||||||||| ||||| |||||||||||||||| |||||||    
T  4991185 aaaatgaattaattgaatgtaatcacatgtgtcattgtcatg 4991144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 566 - 611
Target Start/End: Complemental strand, 36188066 - 36188021
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| |||| |||||||||| ||||||||| ||||    
T  36188066 gtgcaaacagctcaaacgagttgggcctccctcaaggatgggcctc 36188021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000004; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 566 - 611
Target Start/End: Complemental strand, 3954899 - 3954854
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||    
T  3954899 gtgcaaacagctcaaacgagctgggcctccctcaaggatggacctc 3954854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 611
Target Start/End: Original strand, 13795206 - 13795251
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  13795206 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctc 13795251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 263 - 304
Target Start/End: Complemental strand, 18268048 - 18268007
Alignment:
Q  263 tgagaaaatgaattatttgaacgtaatcacatgtgtcagtgt 304  Q
    ||||||||||||||| ||||||||||||||||||||| ||||    
T  18268048 tgagaaaatgaattaattgaacgtaatcacatgtgtcggtgt 18268007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 611
Target Start/End: Complemental strand, 27078865 - 27078820
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  27078865 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctc 27078820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 611
Target Start/End: Complemental strand, 27084662 - 27084617
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  27084662 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctc 27084617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 611
Target Start/End: Original strand, 36605865 - 36605910
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  36605865 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctc 36605910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 611
Target Start/End: Complemental strand, 36716322 - 36716277
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  36716322 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctc 36716277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 611
Target Start/End: Complemental strand, 38681394 - 38681349
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  38681394 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctc 38681349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 611
Target Start/End: Complemental strand, 53149504 - 53149459
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| |||||||||||||| |||||||||| ||||    
T  53149504 gtgcaaacagctcaaacgagctgggcctccaccaaggatgggcctc 53149459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 611
Target Start/End: Complemental strand, 54619500 - 54619455
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  54619500 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctc 54619455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 566 - 606
Target Start/End: Complemental strand, 1148401 - 1148361
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatgg 606  Q
    |||| |||||||||| |||||||||||||||||||||||||    
T  1148401 gtgcgaacagctcaaacgagctgggcctcccccaaggatgg 1148361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 263 - 299
Target Start/End: Original strand, 21768622 - 21768658
Alignment:
Q  263 tgagaaaatgaattatttgaacgtaatcacatgtgtc 299  Q
    |||||||||||||||||||||||||| ||||||||||    
T  21768622 tgagaaaatgaattatttgaacgtaaccacatgtgtc 21768658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 302
Target Start/End: Complemental strand, 5457263 - 5457224
Alignment:
Q  263 tgagaaaatgaattatttgaacgtaatcacatgtgtcagt 302  Q
    ||||||||| ||||||||||||||||||||| ||||||||    
T  5457263 tgagaaaatcaattatttgaacgtaatcacacgtgtcagt 5457224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 267 - 306
Target Start/End: Original strand, 28525028 - 28525067
Alignment:
Q  267 aaaatgaattatttgaacgtaatcacatgtgtcagtgtca 306  Q
    ||||||||||| ||||| ||||||||||||||||||||||    
T  28525028 aaaatgaattaattgaatgtaatcacatgtgtcagtgtca 28525067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 566 - 611
Target Start/End: Original strand, 42098717 - 42098762
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| |||| |||||||||| ||||||||| ||||    
T  42098717 gtgcaaacagctcaaacgagttgggcctcccacaaggatgggcctc 42098762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 566 - 611
Target Start/End: Original strand, 47467600 - 47467645
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||| ||||||| ||||||||| ||||    
T  47467600 gtgcaaacagctcaaacgagctgagcctccctcaaggatgggcctc 47467645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 263 - 304
Target Start/End: Original strand, 47542551 - 47542592
Alignment:
Q  263 tgagaaaatgaattatttgaacgtaatcacatgtgtcagtgt 304  Q
    |||||||||||| |||||||| ||||||||||||||| ||||    
T  47542551 tgagaaaatgaactatttgaatgtaatcacatgtgtcggtgt 47542592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 263 - 304
Target Start/End: Original strand, 47542770 - 47542811
Alignment:
Q  263 tgagaaaatgaattatttgaacgtaatcacatgtgtcagtgt 304  Q
    ||||| ||||||||||||||| ||||||||||||||| ||||    
T  47542770 tgagataatgaattatttgaatgtaatcacatgtgtcggtgt 47542811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 263 - 304
Target Start/End: Original strand, 47542989 - 47543030
Alignment:
Q  263 tgagaaaatgaattatttgaacgtaatcacatgtgtcagtgt 304  Q
    ||||| ||||||||||||||| ||||||||||||||| ||||    
T  47542989 tgagataatgaattatttgaatgtaatcacatgtgtcggtgt 47543030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 263 - 304
Target Start/End: Original strand, 47556436 - 47556477
Alignment:
Q  263 tgagaaaatgaattatttgaacgtaatcacatgtgtcagtgt 304  Q
    ||||| ||||||||||||||| ||||||||||||||| ||||    
T  47556436 tgagataatgaattatttgaatgtaatcacatgtgtcggtgt 47556477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 566 - 611
Target Start/End: Complemental strand, 50258781 - 50258736
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    |||||||||||||||  |||||||||||||| ||||||||| ||||    
T  50258781 gtgcaaacagctcaaatgagctgggcctccctcaaggatgggcctc 50258736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000007; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 263 - 306
Target Start/End: Complemental strand, 21186674 - 21186631
Alignment:
Q  263 tgagaaaatgaattatttgaacgtaatcacatgtgtcagtgtca 306  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||    
T  21186674 tgagaaagtgaattatttgaacgtaatcacatgtgtcggtgtca 21186631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 611
Target Start/End: Original strand, 3155022 - 3155067
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  3155022 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctc 3155067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 611
Target Start/End: Original strand, 3952918 - 3952963
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  3952918 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctc 3952963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 611
Target Start/End: Original strand, 6964811 - 6964856
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  6964811 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctc 6964856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 611
Target Start/End: Original strand, 7162696 - 7162741
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  7162696 gtgcaaacagctcaaacgagctgggcctcccacaaggatgggcctc 7162741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 263 - 301
Target Start/End: Complemental strand, 26144366 - 26144328
Alignment:
Q  263 tgagaaaatgaattatttgaacgtaatcacatgtgtcag 301  Q
    ||||||||| ||||||||||||| |||||||||||||||    
T  26144366 tgagaaaattaattatttgaacggaatcacatgtgtcag 26144328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 566 - 611
Target Start/End: Original strand, 4505698 - 4505743
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||| ||| ||||| ||||    
T  4505698 gtgcaaacagctcaaacgagctgggcctccctcaatgatgggcctc 4505743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 566 - 611
Target Start/End: Complemental strand, 12337736 - 12337691
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||| ||||||| ||||||||| ||||    
T  12337736 gtgcaaacagctcaaacgagctgagcctccctcaaggatgggcctc 12337691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 267 - 324
Target Start/End: Complemental strand, 25384537 - 25384480
Alignment:
Q  267 aaaatgaattatttgaacgtaatcacatgtgtcagtgtcatgttagtgtccgacaccg 324  Q
    ||||||||||||  ||||| ||||||||||||||||||| ||  |||||| |||||||    
T  25384537 aaaatgaattatgggaacggaatcacatgtgtcagtgtcgtgccagtgtcagacaccg 25384480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 566 - 611
Target Start/End: Original strand, 34693166 - 34693211
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| |||| |||||||||| ||||||||| ||||    
T  34693166 gtgcaaacagctcaaacgagttgggcctccctcaaggatgggcctc 34693211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 566 - 611
Target Start/End: Original strand, 34715578 - 34715623
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| |||| |||||||||| ||||||||| ||||    
T  34715578 gtgcaaacagctcaaacgagttgggcctccctcaaggatgggcctc 34715623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 326
Target Start/End: Complemental strand, 35198272 - 35198211
Alignment:
Q  265 agaaaatgaattatttgaacgtaatcacatgtgtcagtgtcatgttagtgtccgacaccgac 326  Q
    ||||||||||||| ||||| ||||||||||||| | ||||| ||||  |||| |||||||||    
T  35198272 agaaaatgaattaattgaatgtaatcacatgtgacggtgtcgtgttgttgtcggacaccgac 35198211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 267 - 304
Target Start/End: Complemental strand, 37232193 - 37232156
Alignment:
Q  267 aaaatgaattatttgaacgtaatcacatgtgtcagtgt 304  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  37232193 aaaatgaattatttgaacataatcacatgtgtcggtgt 37232156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.000000001; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 611
Target Start/End: Complemental strand, 12596476 - 12596431
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  12596476 gtgcaaacagctcaaacgagctgggcctccctcaaggatggccctc 12596431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 611
Target Start/End: Complemental strand, 18777065 - 18777020
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  18777065 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctc 18777020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 611
Target Start/End: Original strand, 28749600 - 28749645
Alignment:
Q  566 gtgcaaacagctcaaccgagctgggcctcccccaaggatggacctc 611  Q
    ||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  28749600 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctc 28749645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 263 - 299
Target Start/End: Original strand, 20204255 - 20204291
Alignment:
Q  263 tgagaaaatgaattatttgaacgtaatcacatgtgtc 299  Q
    ||||||||||||| |||||||||||||||||||||||    
T  20204255 tgagaaaatgaatcatttgaacgtaatcacatgtgtc 20204291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 306
Target Start/End: Original strand, 8093842 - 8093883
Alignment:
Q  265 agaaaatgaattatttgaacgtaatcacatgtgtcagtgtca 306  Q
    ||||||||||| |||||||  |||||||||||||||||||||    
T  8093842 agaaaatgaatgatttgaatataatcacatgtgtcagtgtca 8093883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 646 - 683
Target Start/End: Original strand, 28749682 - 28749719
Alignment:
Q  646 atcctccaataaaaaataataattatttcatgccctca 683  Q
    |||||||||||||||| |||||||||||||| ||||||    
T  28749682 atcctccaataaaaaaaaataattatttcattccctca 28749719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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