View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1739_high_5 (Length: 659)

Name: NF1739_high_5
Description: NF1739
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1739_high_5
NF1739_high_5
[»] chr1 (10 HSPs)
chr1 (17-648)||(50182458-50183090)
chr1 (383-530)||(39501112-39501259)
chr1 (373-528)||(33978131-33978286)
chr1 (53-271)||(39500782-39501000)
chr1 (389-486)||(28037638-28037735)
chr1 (467-538)||(12458725-12458796)
chr1 (390-486)||(14650987-14651080)
chr1 (390-486)||(14660778-14660871)
chr1 (436-492)||(7386704-7386760)
chr1 (365-405)||(27466779-27466819)
[»] chr3 (6 HSPs)
chr3 (136-540)||(31574589-31574993)
chr3 (79-530)||(2497054-2497501)
chr3 (365-539)||(4741528-4741702)
chr3 (389-486)||(54548318-54548415)
chr3 (389-486)||(52964141-52964238)
chr3 (436-492)||(29210843-29210899)
[»] chr2 (6 HSPs)
chr2 (163-538)||(14785776-14786148)
chr2 (384-544)||(10748038-10748198)
chr2 (53-268)||(10747699-10747914)
chr2 (391-493)||(36756940-36757042)
chr2 (365-530)||(37670656-37670821)
chr2 (388-491)||(16468348-16468451)
[»] chr7 (6 HSPs)
chr7 (79-530)||(12350683-12351134)
chr7 (79-530)||(41147437-41147888)
chr7 (365-544)||(30305265-30305444)
chr7 (373-527)||(513829-513983)
chr7 (382-492)||(43970028-43970138)
chr7 (389-492)||(41605361-41605464)
[»] chr5 (7 HSPs)
chr5 (79-530)||(23150952-23151403)
chr5 (336-530)||(28499116-28499310)
chr5 (382-491)||(13020906-13021015)
chr5 (382-491)||(13092430-13092539)
chr5 (476-544)||(34893753-34893821)
chr5 (389-486)||(10813136-10813233)
chr5 (388-544)||(7274525-7274681)
[»] chr4 (7 HSPs)
chr4 (79-530)||(32499229-32499680)
chr4 (384-544)||(42327835-42327995)
chr4 (53-268)||(42328111-42328326)
chr4 (346-544)||(1480981-1481177)
chr4 (392-530)||(54421356-54421494)
chr4 (235-271)||(2262648-2262684)
chr4 (436-536)||(43733950-43734050)
[»] scaffold0067 (1 HSPs)
scaffold0067 (106-530)||(10931-11355)
[»] chr8 (8 HSPs)
chr8 (383-544)||(34752622-34752783)
chr8 (384-544)||(9180663-9180823)
chr8 (383-540)||(11629487-11629644)
chr8 (53-267)||(34752899-34753113)
chr8 (53-268)||(9180939-9181154)
chr8 (53-268)||(11629157-11629372)
chr8 (214-311)||(7593613-7593712)
chr8 (436-540)||(10394672-10394776)
[»] chr6 (3 HSPs)
chr6 (384-544)||(10158887-10159047)
chr6 (53-268)||(10159163-10159378)
chr6 (467-538)||(16863312-16863383)
[»] scaffold0996 (1 HSPs)
scaffold0996 (373-529)||(1496-1652)
[»] scaffold0007 (1 HSPs)
scaffold0007 (365-460)||(188397-188492)
[»] scaffold0687 (1 HSPs)
scaffold0687 (214-311)||(2961-3060)


Alignment Details
Target: chr1 (Bit Score: 501; Significance: 0; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 501; E-Value: 0
Query Start/End: Original strand, 17 - 648
Target Start/End: Original strand, 50182458 - 50183090
Alignment:
Q  17 caaaggtacctgttccccatgcaatttctgctgacacttggatcaaacctcctgtgggcaagattaaatgcaacgtagatgcagccgcttttaataacaa 116  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  50182458 caaaggtacctgttcaccatgcaatttctgctcacacttggatcaaacctcctgtaggcaagattaaatgcaacgtagatgcagccgcttttaataacaa 50182557  T
Q  117 ttctgttatgggatttggtatgtgctttcgtgactttaagggaactcttttgcttggaaaatcagacttttaccactcatcagccacaatcttggaggcc 216  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50182558 ttatgttatgggatttggtatgtgctttcgtgactttaagggaactcttttgcttggaaaatcagacttttaccactcatcagccacaatcttggaggcc 50182657  T
Q  217 gagtctctaggcttacttgatgctattaaagtggctatttcaaatgggatgcatgctgtactatttgaaacagattcaaaatttttgtctgatgccatca 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||    
T  50182658 gagtctctaggcttacttgatgctattaaagtggctatttcaaatgggatgcatgttgtactatttgaaacagattcaaaaattctgtctgatgccatca 50182757  T
Q  317 actctaattttactctaagcaatgaatttggtgatcttgtaatcaaaagtagaagtctcttactcgatagacccgactttgtagtgtcgtaaattaggag 416  Q
    ||||||||||||||| |||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||| |||| |||| |||    
T  50182758 actctaattttactccaagcaatgaatttggtgatcttgtaatccaatgtaaaagtctcttactcgatagacccgactttgtagtgccgtatattaagag 50182857  T
Q  417 gtaagcaaatggtgttgcccatagtattgctagggcatcactatctaatcctagcccccatattttttatcatgtaatgcctactttgtattccttaatt 516  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  50182858 gcaagcaaatggtgttgcccatagtattgctagggcatcactatctaatcctag-ccccatatttttcatcatgtaatgcctactttgtattccttaatt 50182956  T
Q  517 ttgaatgaaatgaagtaactttgccttttgct---nnnnnnnngctctccaaattcatttagataaaattttccggattttcaataagatatgctctcca 613  Q
    ||||||||||||||||||||||||| ||||||           |||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  50182957 ttgaatgaaatgaagtaactttgcc-tttgctaaaaaaaaaaagctctccaaattcatttagataaaattttctgtattttcaataagataagctctcca 50183055  T
Q  614 aattcatcgtatgcttaaacctttgtgcacttcat 648  Q
    |||||||||||||||||||| ||||||||||||||    
T  50183056 aattcatcgtatgcttaaacttttgtgcacttcat 50183090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 383 - 530
Target Start/End: Original strand, 39501112 - 39501259
Alignment:
Q  383 atagacccgactttgtagtgtcgtaaattaggaggtaagcaaatggtgttgcccatagtattgctagggcatcactatctaatcctagcccccatatttt 482  Q
    |||||||||||||||||||||||||  |||||||| |||||||| | |||||  ||||||||||||| |||||||||||| | ||||||| |||||| ||    
T  39501112 atagacccgactttgtagtgtcgtatgttaggaggcaagcaaatagagttgcttatagtattgctagagcatcactatctcaccctagcctccatatctt 39501211  T
Q  483 ttatcatgtaatgcctactttgtattccttaattttgaatgaaatgaa 530  Q
    | |||||||||  |||||||||||| | ||| |||| |||||||||||    
T  39501212 tcatcatgtaacacctactttgtatccgttagtttttaatgaaatgaa 39501259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 373 - 528
Target Start/End: Complemental strand, 33978286 - 33978131
Alignment:
Q  373 ctcttactcgatagacccgactttgtagtgtcgtaaattaggaggtaagcaaatggtgttgcccatagtattgctagggcatcactatctaatcctagcc 472  Q
    ||||| ||| || ||||||||||||||||||| ||  || ||||| |||| ||| | ||||| |||||||||||||| || ||  ||| | |||||||||    
T  33978286 ctcttgctcaattgacccgactttgtagtgtcatatgttcggaggcaagctaatagggttgctcatagtattgctagagcttccttatgtcatcctagcc 33978187  T
Q  473 cccatattttttatcatgtaatgcctactttgtattccttaattttgaatgaaatg 528  Q
    ||||||||||| ||  ||||    |||||||||| ||||||||| |||||||||||    
T  33978186 cccatatttttaatgttgtaccttctactttgtactccttaattatgaatgaaatg 33978131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 53 - 271
Target Start/End: Original strand, 39500782 - 39501000
Alignment:
Q  53 cttggatcaaacctcctgtgggcaagattaaatgcaacgtagatgcagccgcttttaataacaattctgttatgggatttggtatgtgctttcgtgactt 152  Q
    ||||||||||||| || || |||| ||| ||||| || |||||||||| |||||| || || || ||||||||||| | || |||||| || |||||||     
T  39500782 cttggatcaaaccaccggttggcatgatcaaatgtaatgtagatgcagtcgctttcaacaataactctgttatggggtatgatatgtgtttccgtgactc 39500881  T
Q  153 taagggaactcttttgcttggaaaatcagacttttaccactcatcagccacaatcttggaggccgagtctctaggcttacttgatgctattaaagtggct 252  Q
    || |||    || || ||||| ||||||||||| ||| ||||||||||||   | || ||||| |||||| | ||| | || | |||||| |||||||||    
T  39500882 tatgggtgtactattacttggcaaatcagacttctactactcatcagccattgttttagaggctgagtctttcggccttctaggtgctatcaaagtggct 39500981  T
Q  253 atttcaaatgggatgcatg 271  Q
    || ||| |||| |||||||    
T  39500982 atctcacatggaatgcatg 39501000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 389 - 486
Target Start/End: Original strand, 28037638 - 28037735
Alignment:
Q  389 ccgactttgtagtgtcgtaaattaggaggtaagcaaatggtgttgcccatagtattgctagggcatcactatctaatcctagcccccatattttttat 486  Q
    ||||||||  ||||||||| ||||||||| |||  ||| | ||||| |||||||| ||||| || ||  ||||| |||||||||||||| ||||||||    
T  28037638 ccgactttaaagtgtcgtatattaggaggcaagttaatagggttgctcatagtatagctagagcttctttatctcatcctagcccccatcttttttat 28037735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 467 - 538
Target Start/End: Complemental strand, 12458796 - 12458725
Alignment:
Q  467 ctagcccccatattttttatcatgtaatgcctactttgtattccttaattttgaatgaaatgaagtaacttt 538  Q
    |||||||||||||||| ||| |||||  || |||||||||||| || ||| ||||||||||| | |||||||    
T  12458796 ctagcccccatattttctataatgtaccgcttactttgtattctttgattatgaatgaaatgcattaacttt 12458725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 390 - 486
Target Start/End: Original strand, 14650987 - 14651080
Alignment:
Q  390 cgactttgtagtgtcgtaaattaggaggtaagcaaatggtgttgcccatagtattgctagggcatcactatctaatcctagcccccatattttttat 486  Q
    |||||||||||||||||  ||| ||||| ||||||||   ||||| ||||| || ||||| ||||   ||||| |||||||||||||||| ||||||    
T  14650987 cgactttgtagtgtcgttcattcggaggcaagcaaataaggttgcacatagcatagctagagcat---tatctcatcctagcccccatatcttttat 14651080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 390 - 486
Target Start/End: Original strand, 14660778 - 14660871
Alignment:
Q  390 cgactttgtagtgtcgtaaattaggaggtaagcaaatggtgttgcccatagtattgctagggcatcactatctaatcctagcccccatattttttat 486  Q
    |||||||||||||||||  ||| ||||| ||||||||   ||||| ||||| || ||||| ||||   ||||| |||||||||||||||| ||||||    
T  14660778 cgactttgtagtgtcgttcattcggaggcaagcaaataaggttgcacatagcatagctagagcat---tatctcatcctagcccccatatcttttat 14660871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 436 - 492
Target Start/End: Original strand, 7386704 - 7386760
Alignment:
Q  436 catagtattgctagggcatcactatctaatcctagcccccatattttttatcatgta 492  Q
    ||||| |||||||| || ||  |||||||||||||||||||| |||||||| |||||    
T  7386704 catagcattgctagagcctctttatctaatcctagcccccatgttttttatgatgta 7386760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 365 - 405
Target Start/End: Original strand, 27466779 - 27466819
Alignment:
Q  365 gtagaagtctcttactcgatagacccgactttgtagtgtcg 405  Q
    ||||||||||||||||  ||| |||||||||||||||||||    
T  27466779 gtagaagtctcttacttaataaacccgactttgtagtgtcg 27466819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 278; Significance: 1e-155; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 136 - 540
Target Start/End: Original strand, 31574589 - 31574993
Alignment:
Q  136 atgtgctttcgtgactttaagggaactcttttgcttggaaaatcagacttttaccactcatcagccacaatcttggaggccgagtctctaggcttacttg 235  Q
    ||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||    
T  31574589 atgtgcttttgcgactttacgggaactcttttgcttggaaaatcagacttttaccactcatcaaccacaatcttggagggcgagtctctaggtttacttg 31574688  T
Q  236 atgctattaaa-gtggctatttcaaatgggatgcatgctgtactatttgaaacagattcaaaatttttgtctgatgccatcaactctaattttactctaa 334  Q
    || |||||||| ||||||||||||||||||||||||| |||||||||||||| |||||| ||| || ||| |||||||||||||||||||||||||| ||    
T  31574689 atactattaaaagtggctatttcaaatgggatgcatgttgtactatttgaaatagattctaaaattctgtttgatgccatcaactctaattttactccaa 31574788  T
Q  335 gcaatgaatttggtgatcttgtaatcaaaagtagaagtctcttactcgatagacccgactttgtagtgtcgtaaattaggaggtaagcaaatggtgttgc 434  Q
     ||||| |||||||||| |||||||| || ||||||||||||||||||||||| ||||||||| ||||||||| ||||||||| ||| ||||||||||||    
T  31574789 -caatgcatttggtgattttgtaatccaatgtagaagtctcttactcgatagatccgactttgcagtgtcgtatattaggaggcaagtaaatggtgttgc 31574887  T
Q  435 ccatagtattgctagggcatcactatctaatcctagcccccatattttttatcatgtaatgcctactttgtattccttaattttgaatgaaatgaagtaa 534  Q
     | ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  31574888 tcgtagtattgctagggcatcactatctaatcctagccgccatatttttcatcatgtaatgcctacttagtattccttaattttgaatgaaatgaagtaa 31574987  T
Q  535 ctttgc 540  Q
    ||||||    
T  31574988 ctttgc 31574993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 79 - 530
Target Start/End: Complemental strand, 2497501 - 2497054
Alignment:
Q  79 attaaatgcaacgtagatgcagccgcttttaataacaattctgttatgggatttggtatgtgctttcgtgactttaagggaactcttttgcttggaaaat 178  Q
    ||||||||||| || |||||||| || |||||||| |||||| | ||||| | ||||||||| ||||| |||| || ||| ||| | || ||||| ||||    
T  2497501 attaaatgcaatgtcgatgcagctgcatttaataataattctatcatggggtatggtatgtgttttcgcgactatacgggtactttcttacttgggaaat 2497402  T
Q  179 cagacttttaccactcatcagccacaatcttggaggccgagtctctaggcttacttgatgctattaaagtggctatttcaaatgggatgcatgctgtact 278  Q
    |||||||||| ||||||||||||||  | |||||||| || ||||||| ||| ||||||||||||||||||||||||||||||| |||||||| |||| |    
T  2497401 cagacttttatcactcatcagccactgttttggaggcagaatctctagccttgcttgatgctattaaagtggctatttcaaatgagatgcatgttgtatt 2497302  T
Q  279 atttgaaacagattcaaaatttttgtctgatgccatcaactctaattttactctaagcaatgaatttggtgatcttgtaatcaaaagtagaagtctctta 378  Q
    ||||||||| ||||| ||  | ||  |||||||  ||| |  ||| | | | |  | |||||| ||||| |||||||||| | || ||||||||||||||    
T  2497301 atttgaaactgattcgaagatcttagctgatgcactcaccaataactcttcccctaccaatgagtttggagatcttgtaacccaatgtagaagtctctta 2497202  T
Q  379 ctcgatagacccgactttgtagtgtcgtaaattaggaggtaagcaaatggtgttgcccatagtattgctagggcatcactatctaatcctagcccccata 478  Q
    || |||| ||||||||||| |||||||||  ||    || |||||||| ||||||| |||||||||||| | || || |||||| |||||||||||||||    
T  2497201 cttgataaacccgactttgcagtgtcgtatgtt----ggcaagcaaatagtgttgctcatagtattgctcgagcttcgctatctcatcctagcccccata 2497106  T
Q  479 ttttttatcatgtaatgcctactttgtattccttaattttgaatgaaatgaa 530  Q
    ||||| |||||||| |||||||||||||   ||||||| |||||||||||||    
T  2497105 tttttcatcatgtattgcctactttgtaccgcttaattatgaatgaaatgaa 2497054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 365 - 539
Target Start/End: Complemental strand, 4741702 - 4741528
Alignment:
Q  365 gtagaagtctcttactcgatagacccgactttgtagtgtcgtaaattaggaggtaagcaaatggtgttgcccatagtattgctagggcatcactatctaa 464  Q
    ||||||||||||||||   ||||  | ||||||| ||||||||  |||||||| | || |||   ||||| |||||||||||||| |||||  |||| ||    
T  4741702 gtagaagtctcttactttctagaaactactttgttgtgtcgtatgttaggaggcacgctaataaagttgctcatagtattgctagagcatctttatccaa 4741603  T
Q  465 tcctagcccccatattttttatcatgtaatgcctactttgtattccttaattttgaatgaaatgaagtaactttg 539  Q
     ||||||||||||||||||| | |||||  | ||||||| || |  |||||| ||||||||||||| ||||||||    
T  4741602 ccctagcccccatattttttgtgatgtaccgactactttatactttttaattatgaatgaaatgaattaactttg 4741528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 389 - 486
Target Start/End: Complemental strand, 54548415 - 54548318
Alignment:
Q  389 ccgactttgtagtgtcgtaaattaggaggtaagcaaatggtgttgcccatagtattgctagggcatcactatctaatcctagcccccatattttttat 486  Q
    ||||||||  ||||||||| ||||||||| |||  ||| | ||||| |||||||| ||||| || ||  ||||| |||||||||||||| ||||||||    
T  54548415 ccgactttaaagtgtcgtatattaggaggcaagttaatagagttgctcatagtatagctagagcttccttatctcatcctagcccccatcttttttat 54548318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 486
Target Start/End: Complemental strand, 52964238 - 52964141
Alignment:
Q  389 ccgactttgtagtgtcgtaaattaggaggtaagcaaatggtgttgcccatagtattgctagggcatcactatctaatcctagcccccatattttttat 486  Q
    ||||||||  ||||||||| ||||||||| |||  ||| | ||||| |||||||| |||||  | ||  ||||| |||||||||||||| ||||||||    
T  52964238 ccgactttaaagtgtcgtatattaggaggcaagttaatagggttgctcatagtatagctagatcttccttatctcatcctagcccccatcttttttat 52964141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 436 - 492
Target Start/End: Complemental strand, 29210899 - 29210843
Alignment:
Q  436 catagtattgctagggcatcactatctaatcctagcccccatattttttatcatgta 492  Q
    ||||| |||||||| || ||  |||||||||||| |||||||||||||||| |||||    
T  29210899 catagcattgctagagcctctttatctaatcctaacccccatattttttatgatgta 29210843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 177; Significance: 4e-95; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 163 - 538
Target Start/End: Original strand, 14785776 - 14786148
Alignment:
Q  163 cttttgcttggaaaatcagacttttaccactcatcagccacaatcttggaggccgagtctctaggcttacttgatgctattaaagtggctatttcaaatg 262  Q
    |||||||||||||||||| |||||||||| |||||||||||||| |||||| |||||||||||||||| |||||  | ||  ||||||||||||||||||    
T  14785776 cttttgcttggaaaatcatacttttaccattcatcagccacaattttggagaccgagtctctaggcttgcttgacacaat--aagtggctatttcaaatg 14785873  T
Q  263 ggatgcatgctgtactatttgaaacagattcaaaatttttgtctgatgccatcaactctaattttactctaagcaatgaatttggtgatcttgtaatcaa 362  Q
    |||||| || |||||||||||||||  ||| |||| || ||| ||||||||||||||| || | | |||  |||||||| || ||||||||||||||| |    
T  14785874 ggatgcttgatgtactatttgaaactaatttaaaacttatgtatgatgccatcaactcaaactcttctcccagcaatgagttaggtgatcttgtaatcca 14785973  T
Q  363 aagtagaagtctcttactcgatagacccgactttgtagtgtcgtaaattaggaggtaagcaaatggtgttgcccatagtattgctagggcatcactatct 462  Q
    | |||||||||| ||| | ||||||||| | |||  | |||||||  |||||||| |||||||||||||||| |||||||||||||| ||||||||||||    
T  14785974 atgtagaagtcttttatttgatagacccaatttttcaatgtcgtatgttaggaggcaagcaaatggtgttgctcatagtattgctagagcatcactatct 14786073  T
Q  463 aatcctagcccccatattttttatcatgtaatgcctactttgtattccttaattttgaatgaaatgaagtaacttt 538  Q
     ||| || ||||| ||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  14786074 catcttaacccccttatttttcatcat-taatgcttactttgtattccttaattttgaatgaaatgaagtaacttt 14786148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 384 - 544
Target Start/End: Original strand, 10748038 - 10748198
Alignment:
Q  384 tagacccgactttgtagtgtcgtaaattaggaggtaagcaaatggtgttgcccatagtattgctagggcatcactatctaatcctagcccccatattttt 483  Q
    ||||||||||||||||||||||||  |||||||| |||||||| | ||||| |||| ||||||||| |||||||||||| | |||||||| ||||| |||    
T  10748038 tagacccgactttgtagtgtcgtatgttaggaggcaagcaaatagagttgctcataatattgctagagcatcactatctcaccctagccctcatatcttt 10748137  T
Q  484 tatcatgtaatgcctactttgtattccttaattttgaatgaaatgaagtaactttgccttt 544  Q
     |||||||||  |||||||||||| | |||||||| ||||||||||| |||||||||||||    
T  10748138 catcatgtaacacctactttgtatccgttaatttttaatgaaatgaactaactttgccttt 10748198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 53 - 268
Target Start/End: Original strand, 10747699 - 10747914
Alignment:
Q  53 cttggatcaaacctcctgtgggcaagattaaatgcaacgtagatgcagccgcttttaataacaattctgttatgggatttggtatgtgctttcgtgactt 152  Q
    ||||||||||||| || || |||| ||| ||||| || ||||||||||| |||||  | || || ||||||||||| | ||||||||| || |||||||     
T  10747699 cttggatcaaaccaccggttggcatgatcaaatgtaatgtagatgcagctgctttcgacaataactctgttatggggtatggtatgtgtttccgtgactc 10747798  T
Q  153 taagggaactcttttgcttggaaaatcagacttttaccactcatcagccacaatcttggaggccgagtctctaggcttacttgatgctattaaagtggct 252  Q
    || |||     | || ||||| ||||||||||| ||| |||||||||||||  | || ||||| |||||| ||||| | || |||||||| |||||||||    
T  10747799 tatgggtgtattattacttggcaaatcagacttctactactcatcagccactgttttagaggctgagtctttaggccttctagatgctatcaaagtggct 10747898  T
Q  253 atttcaaatgggatgc 268  Q
    || ||| |||| ||||    
T  10747899 atctcacatggaatgc 10747914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 391 - 493
Target Start/End: Complemental strand, 36757042 - 36756940
Alignment:
Q  391 gactttgtagtgtcgtaaattaggaggtaagcaaatggtgttgcccatagtattgctagggcatcactatctaatcctagcccccatattttttatcatg 490  Q
    ||||||||||||||||  ||| ||||| |||| |||   ||||| |||||||||||||| || ||  ||||  ||||||||||||||||||| |||||||    
T  36757042 gactttgtagtgtcgtttattcggaggcaagctaataaagttgctcatagtattgctagagcttccttatcacatcctagcccccatattttctatcatg 36756943  T
Q  491 taa 493  Q
    |||    
T  36756942 taa 36756940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 365 - 530
Target Start/End: Complemental strand, 37670821 - 37670656
Alignment:
Q  365 gtagaagtctcttactcgatagacccgactttgtagtgtcgtaaattaggaggtaagcaaatggtgttgcccatagtattgctagggcatcactatctaa 464  Q
    ||||||||||| ||||   ||||  ||||||||| ||||||||  |||| ||| || |||||   ||||  |||||||||||||| |||||  ||||  |    
T  37670821 gtagaagtctcgtactttctagaaacgactttgttgtgtcgtatgttagaaggcaaacaaataaagttgttcatagtattgctagagcatctttatccca 37670722  T
Q  465 tcctagcccccatattttttatcatgtaatgcctactttgtattccttaattttgaatgaaatgaa 530  Q
     ||||||||||||||||||||| |||||  | ||||||||||  | |||||| || ||||||||||    
T  37670721 ccctagcccccatattttttatgatgtaccgactactttgtaccctttaattatggatgaaatgaa 37670656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 388 - 491
Target Start/End: Complemental strand, 16468451 - 16468348
Alignment:
Q  388 cccgactttgtagtgtcgtaaattaggaggtaagcaaatggtgttgcccatagtattgctagggcatcactatctaatcctagcccccatattttttatc 487  Q
    ||||||| |||||||||||   ||||||||||||||||  |||| || ||||  |||||||| ||  | ||||||||||||||||| ||| | ||||||     
T  16468451 cccgactatgtagtgtcgtttgttaggaggtaagcaaacagtgtagctcataacattgctagagctgctctatctaatcctagccctcatgtcttttatg 16468352  T
Q  488 atgt 491  Q
    ||||    
T  16468351 atgt 16468348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 152; Significance: 4e-80; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 79 - 530
Target Start/End: Complemental strand, 12351134 - 12350683
Alignment:
Q  79 attaaatgcaacgtagatgcagccgcttttaataacaattctgttatgggatttggtatgtgctttcgtgactttaagggaactcttttgcttggaaaat 178  Q
    |||||||||||||| |||||||| || |||||||| |||||| | ||||| | ||| ||||| ||||| |||| ||  || ||| | |||||||| ||||    
T  12351134 attaaatgcaacgtcgatgcagctgcatttaataataattctatcatggggtatggcatgtgttttcgggactctacaggtactttgttgcttgggaaat 12351035  T
Q  179 cagacttttaccactcatcagccacaatcttggaggccgagtctctaggcttacttgatgctattaaagtggctatttcaaatgggatgcatgctgtact 278  Q
    |||||||||| |||||||||||||| || |||||||| || ||||||| ||| ||||||||||||||| ||||||||||||||| |||||||| |||| |    
T  12351034 cagacttttatcactcatcagccactattttggaggcagaatctctagccttgcttgatgctattaaaatggctatttcaaatgagatgcatgttgtatt 12350935  T
Q  279 atttgaaacagattcaaaatttttgtctgatgccatcaactctaattttactctaagcaatgaatttggtgatcttgtaatcaaaagtagaagtctctta 378  Q
    ||||||||| ||||| ||  | ||  |||||||  ||| |  ||| | | | |  | |||||| ||||| |||||||||| | || |||||||||| |||    
T  12350934 atttgaaactgattcgaagatcttagctgatgcactcaccaataactcttcccctaccaatgagtttggagatcttgtaacccaatgtagaagtctatta 12350835  T
Q  379 ctcgatagacccgactttgtagtgtcgtaaattaggaggtaagcaaatggtgttgcccatagtattgctagggcatcactatctaatcctagcccccata 478  Q
    || |||| ||||||||||| |||||||||  |||||||| ||||||||  |||||| |||||||||||| | || || |||||| |||||| ||||||||    
T  12350834 cttgataaacccgactttgcagtgtcgtatgttaggaggcaagcaaatattgttgctcatagtattgctcgagcttcgctatctcatcctatcccccata 12350735  T
Q  479 ttttttatcatgtaatgcctactttgtattccttaattttgaatgaaatgaa 530  Q
    ||||| |||||||| |||||||||||||    ||||||||||||||||||||    
T  12350734 tttttcatcatgtattgcctactttgtaccatttaattttgaatgaaatgaa 12350683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 79 - 530
Target Start/End: Original strand, 41147437 - 41147888
Alignment:
Q  79 attaaatgcaacgtagatgcagccgcttttaataacaattctgttatgggatttggtatgtgctttcgtgactttaagggaactcttttgcttggaaaat 178  Q
    ||||||||||| || |||||||| || |||||||| |||||| | ||||| | ||||||||| ||||| |||| ||  || ||| |||| ||||| ||||    
T  41147437 attaaatgcaatgtcgatgcagctgcatttaataataattctatcatggggtatggtatgtgttttcgcgactatacaggtacttttttacttgggaaat 41147536  T
Q  179 cagacttttaccactcatcagccacaatcttggaggccgagtctctaggcttacttgatgctattaaagtggctatttcaaatgggatgcatgctgtact 278  Q
    |||||||| | ||||||||||||||  | |||||||| || ||||||| ||| ||||||||||||||| ||||||||||||||| |||||||| |||| |    
T  41147537 cagactttcatcactcatcagccactgttttggaggcagaatctctagccttgcttgatgctattaaattggctatttcaaatgagatgcatgttgtatt 41147636  T
Q  279 atttgaaacagattcaaaatttttgtctgatgccatcaactctaattttactctaagcaatgaatttggtgatcttgtaatcaaaagtagaagtctctta 378  Q
    ||||||||| ||||| ||  | ||  |||||||  ||| |  ||| | | | |  | |||||| ||||| |||||||||| | || ||||||||||||||    
T  41147637 atttgaaactgattcgaagatcttagctgatgcactcaccaataactcttcccctaccaatgagtttggagatcttgtaacccaatgtagaagtctctta 41147736  T
Q  379 ctcgatagacccgactttgtagtgtcgtaaattaggaggtaagcaaatggtgttgcccatagtattgctagggcatcactatctaatcctagcccccata 478  Q
    || |||| ||||||||||| |||||||||  |||||||| |||||||| ||||||| |||||||||||| | || || |||||| |||||||||||||||    
T  41147737 cttgataaacccgactttgcagtgtcgtatgttaggaggcaagcaaatagtgttgctcatagtattgctcgagcttcgctatctcatcctagcccccata 41147836  T
Q  479 ttttttatcatgtaatgcctactttgtattccttaattttgaatgaaatgaa 530  Q
    ||||| |||||||| |||||||||||||   | ||||| |||||||||||||    
T  41147837 tttttcatcatgtattgcctactttgtaccgcctaattatgaatgaaatgaa 41147888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 365 - 544
Target Start/End: Complemental strand, 30305444 - 30305265
Alignment:
Q  365 gtagaagtctcttactcgatagacccgactttgtagtgtcgtaaattaggaggtaagcaaatggtgttgcccatagtattgctagggcatcactatctaa 464  Q
    ||||||||||||||||| ||||   ||||||||||| ||||||  || ||||| || ||||| |  |||| |||||||||||||   ||||||||||| |    
T  30305444 gtagaagtctcttactcaatagtttcgactttgtagagtcgtatgtttggaggcaaacaaatagaattgctcatagtattgctaaaacatcactatctca 30305345  T
Q  465 tcctagcccccatattttttatcatgtaatgcctactttgtattccttaattttgaatgaaatgaagtaactttgccttt 544  Q
     ||||| ||||||||||||  |||||||  | ||||||||||| | || |||||| |||||| ||| |||||| ||||||    
T  30305344 ccctagaccccatatttttcgtcatgtatcgtctactttgtatccgttgattttgtatgaaaggaactaacttcgccttt 30305265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 373 - 527
Target Start/End: Original strand, 513829 - 513983
Alignment:
Q  373 ctcttactcgatagacccgactttgtagtgtcgtaaattaggaggtaagcaaatggtgttgcccatagtattgctagggcatcactatctaatcctagcc 472  Q
    ||||| ||| |||||||||||||||||||||||||  || ||||| |||| ||| | ||||| |||||||||||||| || ||  ||| | |||||| ||    
T  513829 ctcttgctcaatagacccgactttgtagtgtcgtatgtttggaggcaagctaatagggttgctcatagtattgctagagcttccttatgtcatcctaacc 513928  T
Q  473 cccatattttttatcatgtaatgcctactttgtattccttaattttgaatgaaat 527  Q
     |||||||||| ||  ||||    |||||||||| |||||||||  |||||||||    
T  513929 tccatatttttaatgttgtaccttctactttgtactccttaattacgaatgaaat 513983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 492
Target Start/End: Original strand, 43970028 - 43970138
Alignment:
Q  382 gatagacccgactttgtagtgtcgtaaattaggaggtaagcaaatggtgttgcccatagtattgctagggcatcactatctaatcctagcccccatattt 481  Q
    |||| |||||||||| ||||||| ||  || | ||| ||||||||   ||||| |||||||||||||| || ||  |||| |||||||||||||||||||    
T  43970028 gataaacccgactttatagtgtcatatgttcgtaggcaagcaaataaggttgctcatagtattgctagagcgtccttatccaatcctagcccccatattt 43970127  T
Q  482 tttatcatgta 492  Q
    | ||| |||||    
T  43970128 tctatgatgta 43970138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 41605361 - 41605464
Alignment:
Q  389 ccgactttgtagtgtcgtaaattaggaggtaagcaaatggtgttgcccatagtattgctagggcatcactatctaatcctagcccccatattttttatca 488  Q
    |||||||||||||||||||  ||  |||||| ||||||   ||||| |||||||||||||| || ||  |||| ||||  | |||||||||||||||| |    
T  41605361 ccgactttgtagtgtcgtatgtttagaggtaggcaaataaggttgctcatagtattgctagagcgtccttatccaatctcaacccccatattttttataa 41605460  T
Q  489 tgta 492  Q
    ||||    
T  41605461 tgta 41605464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 152; Significance: 4e-80; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 79 - 530
Target Start/End: Original strand, 23150952 - 23151403
Alignment:
Q  79 attaaatgcaacgtagatgcagccgcttttaataacaattctgttatgggatttggtatgtgctttcgtgactttaagggaactcttttgcttggaaaat 178  Q
    ||||||||||| || |||||||| || |||||||| |||||| | ||||| | ||||||||| ||||| |||| ||  || ||| |||| ||||| ||||    
T  23150952 attaaatgcaatgtcgatgcagctgcatttaataataattctatcatggggtatggtatgtgttttcgcgactatacaggtacttttttacttgggaaat 23151051  T
Q  179 cagacttttaccactcatcagccacaatcttggaggccgagtctctaggcttacttgatgctattaaagtggctatttcaaatgggatgcatgctgtact 278  Q
    |||||||| | ||||||||||||||  | |||||||| || ||||||| ||| ||||||||||||||| ||||||||||||||| |||||||| |||| |    
T  23151052 cagactttcatcactcatcagccactgttttggaggcagaatctctagccttgcttgatgctattaaattggctatttcaaatgagatgcatgttgtatt 23151151  T
Q  279 atttgaaacagattcaaaatttttgtctgatgccatcaactctaattttactctaagcaatgaatttggtgatcttgtaatcaaaagtagaagtctctta 378  Q
    ||||||||| ||||| ||  | ||  |||||||  ||| |  ||| | | | |  | |||||| ||||| |||||||||| | || ||||||||||||||    
T  23151152 atttgaaactgattcgaagatcttagctgatgcactcaccaataactcttcccctaccaatgagtttggagatcttgtaacccaatgtagaagtctctta 23151251  T
Q  379 ctcgatagacccgactttgtagtgtcgtaaattaggaggtaagcaaatggtgttgcccatagtattgctagggcatcactatctaatcctagcccccata 478  Q
    || |||| ||||||||||| |||||||||  |||||||| |||||||| ||||||| |||||||||||| | || || |||||| |||||||||||||||    
T  23151252 cttgataaacccgactttgcagtgtcgtatgttaggaggcaagcaaatagtgttgctcatagtattgctcgagcttcgctatctcatcctagcccccata 23151351  T
Q  479 ttttttatcatgtaatgcctactttgtattccttaattttgaatgaaatgaa 530  Q
    ||||| |||||||| |||||||||||||   | ||||| |||||||||||||    
T  23151352 tttttcatcatgtattgcctactttgtaccgcctaattatgaatgaaatgaa 23151403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 336 - 530
Target Start/End: Original strand, 28499116 - 28499310
Alignment:
Q  336 caatgaatttggtgatcttgtaatcaaaagtagaagtctcttactcgatagacccgactttgtagtgtcgtaaattaggaggtaagcaaatggtgttgcc 435  Q
    |||||| ||||| |||||| ||||| || |||||||||||||| | |||| ||| ||||||  |||||||||  |||||||| |||||||| |||||||     
T  28499116 caatgagtttggagatcttataatccaatgtagaagtctcttatttgataaacctgactttacagtgtcgtatgttaggaggcaagcaaatagtgttgct 28499215  T
Q  436 catagtattgctagggcatcactatctaatcctagcccccatattttttatcatgtaatgcctactttgtattccttaattttgaatgaaatgaa 530  Q
    |||||||||||| | || || |||||| |||||||||||||||||||| |||||||| |||||||||| || |  |||||| |||||||||||||    
T  28499216 catagtattgctcgagcttcgctatctcatcctagcccccatatttttcatcatgtattgcctactttatactgtttaattatgaatgaaatgaa 28499310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 382 - 491
Target Start/End: Complemental strand, 13021015 - 13020906
Alignment:
Q  382 gatagacccgactttgtagtgtcgtaaattaggaggtaagcaaatggtgttgcccatagtattgctagggcatcactatctaatcctagcccccatattt 481  Q
    |||| |||||||||||||||||||||  || ||||| ||||||||   |||||  ||||||||||||| || ||  |||| ||||||| |||||||||||    
T  13021015 gataaacccgactttgtagtgtcgtatgttcggaggcaagcaaataaggttgcttatagtattgctagagcgtccttatccaatcctaacccccatattt 13020916  T
Q  482 tttatcatgt 491  Q
    | ||| ||||    
T  13020915 tctatgatgt 13020906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 382 - 491
Target Start/End: Complemental strand, 13092539 - 13092430
Alignment:
Q  382 gatagacccgactttgtagtgtcgtaaattaggaggtaagcaaatggtgttgcccatagtattgctagggcatcactatctaatcctagcccccatattt 481  Q
    |||| |||||||||||||||||||||  || ||||| ||||||||   |||||  ||||||||||||| || ||  |||| ||||||| |||||||||||    
T  13092539 gataaacccgactttgtagtgtcgtatgttcggaggcaagcaaataaggttgcttatagtattgctagagcgtcgttatccaatcctaacccccatattt 13092440  T
Q  482 tttatcatgt 491  Q
    | ||| ||||    
T  13092439 tctatgatgt 13092430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 476 - 544
Target Start/End: Complemental strand, 34893821 - 34893753
Alignment:
Q  476 atattttttatcatgtaatgcctactttgtattccttaattttgaatgaaatgaagtaactttgccttt 544  Q
    |||||||| |||||||| |||||||||||||    |||||||||||||||||||| | ||| |||||||    
T  34893821 atatttttcatcatgtattgcctactttgtaccaattaattttgaatgaaatgaattgactctgccttt 34893753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 486
Target Start/End: Complemental strand, 10813233 - 10813136
Alignment:
Q  389 ccgactttgtagtgtcgtaaattaggaggtaagcaaatggtgttgcccatagtattgctagggcatcactatctaatcctagcccccatattttttat 486  Q
    ||||||||  |||||| || ||| ||||| |||| ||| | ||||| |||||||| ||||| || ||  ||||| |||||||||||||| ||||||||    
T  10813233 ccgactttaaagtgtcatatattcggaggcaagctaatagggttgctcatagtatagctagagcttccttatctcatcctagcccccatcttttttat 10813136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 388 - 544
Target Start/End: Original strand, 7274525 - 7274681
Alignment:
Q  388 cccgactttgtagtgtcgtaaattaggaggtaagcaaatggtgttgcccatagtattgctagggcatcactatctaatcctagcccccatattttttatc 487  Q
    ||||||| |||||||||||  ||||||||| ||| |||| |||| || |||| |||||| || |   | |||||  |||||||||||||| | ||||||     
T  7274525 cccgactatgtagtgtcgtttattaggaggcaagaaaatagtgtggctcataatattgcgagagatgctctatcgtatcctagcccccatgtcttttatg 7274624  T
Q  488 atgtaatgcctactttgtattccttaattttgaatgaaatgaagtaactttgccttt 544  Q
    ||||     |||| ||||||||  || || ||||||||||| ||||| |||||||||    
T  7274625 atgttcctactaccttgtattctctatttgtgaatgaaatggagtaattttgccttt 7274681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 152; Significance: 4e-80; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 79 - 530
Target Start/End: Original strand, 32499229 - 32499680
Alignment:
Q  79 attaaatgcaacgtagatgcagccgcttttaataacaattctgttatgggatttggtatgtgctttcgtgactttaagggaactcttttgcttggaaaat 178  Q
    ||||||||||| || |||||||| || |||||||| |||||| | ||||| | ||||||||| ||||| |||| ||  || ||| |||| ||||| ||||    
T  32499229 attaaatgcaatgtcgatgcagctgcatttaataataattctatcatggggtatggtatgtgttttcgcgactatacaggtacttttttacttgggaaat 32499328  T
Q  179 cagacttttaccactcatcagccacaatcttggaggccgagtctctaggcttacttgatgctattaaagtggctatttcaaatgggatgcatgctgtact 278  Q
    |||||||| | ||||||||||||||  | |||||||| || ||||||| ||| ||||||||||||||| ||||||||||||||| |||||||| |||| |    
T  32499329 cagactttcatcactcatcagccactgttttggaggcagaatctctagccttgcttgatgctattaaattggctatttcaaatgagatgcatgttgtatt 32499428  T
Q  279 atttgaaacagattcaaaatttttgtctgatgccatcaactctaattttactctaagcaatgaatttggtgatcttgtaatcaaaagtagaagtctctta 378  Q
    ||||||||| ||||| ||  | ||  |||||||  ||| |  ||| | | | |  | |||||| ||||| |||||||||| | || ||||||||||||||    
T  32499429 atttgaaactgattcgaagatcttagctgatgcactcaccaataactcttcccctaccaatgagtttggagatcttgtaacccaatgtagaagtctctta 32499528  T
Q  379 ctcgatagacccgactttgtagtgtcgtaaattaggaggtaagcaaatggtgttgcccatagtattgctagggcatcactatctaatcctagcccccata 478  Q
    || |||| ||||||||||| |||||||||  |||||||| |||||||| ||||||| |||||||||||| | || || |||||| |||||||||||||||    
T  32499529 cttgataaacccgactttgcagtgtcgtatgttaggaggcaagcaaatagtgttgctcatagtattgctcgagcttcgctatctcatcctagcccccata 32499628  T
Q  479 ttttttatcatgtaatgcctactttgtattccttaattttgaatgaaatgaa 530  Q
    ||||| |||||||| |||||||||||||   | ||||| |||||||||||||    
T  32499629 tttttcatcatgtattgcctactttgtaccgcctaattatgaatgaaatgaa 32499680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 384 - 544
Target Start/End: Complemental strand, 42327995 - 42327835
Alignment:
Q  384 tagacccgactttgtagtgtcgtaaattaggaggtaagcaaatggtgttgcccatagtattgctagggcatcactatctaatcctagcccccatattttt 483  Q
    ||||||||||||||||||||||||  |||||||| |||||||| | ||||| |||| ||||||||| |||||||||||| | |||||||||||||| |||    
T  42327995 tagacccgactttgtagtgtcgtatgttaggaggcaagcaaatagagttgctcataatattgctagagcatcactatctcaccctagcccccatatcttt 42327896  T
Q  484 tatcatgtaatgcctactttgtattccttaattttgaatgaaatgaagtaactttgccttt 544  Q
     |||||||||  |||||||||||| | |||||||| ||||||||||| |||||||||||||    
T  42327895 catcatgtaacacctactttgtatccgttaatttttaatgaaatgaactaactttgccttt 42327835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 53 - 268
Target Start/End: Complemental strand, 42328326 - 42328111
Alignment:
Q  53 cttggatcaaacctcctgtgggcaagattaaatgcaacgtagatgcagccgcttttaataacaattctgttatgggatttggtatgtgctttcgtgactt 152  Q
    ||||||||||||| || || |||| ||| ||||| || ||||||||||| |||||  | || || ||||||||||| | ||||||||| || |||||||     
T  42328326 cttggatcaaaccaccggttggcatgatcaaatgtaatgtagatgcagctgctttcgacaataactctgttatggggtatggtatgtgtttccgtgactc 42328227  T
Q  153 taagggaactcttttgcttggaaaatcagacttttaccactcatcagccacaatcttggaggccgagtctctaggcttacttgatgctattaaagtggct 252  Q
    || |||     | || ||||| ||||||||||| ||| |||||||||||||  | || ||||| |||||| ||||| | || |||||||| |||||||||    
T  42328226 tatgggtgtattattacttggcaaatcagacttctactactcatcagccactgttttagaggctgagtctttaggccttctagatgctatcaaagtggct 42328127  T
Q  253 atttcaaatgggatgc 268  Q
    || ||| |||| ||||    
T  42328126 atctcacatggaatgc 42328111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 346 - 544
Target Start/End: Original strand, 1480981 - 1481177
Alignment:
Q  346 ggtgatcttgtaatcaaaagtagaagtctcttactcgatagacccgactttgtagtgtcgtaaattaggaggtaagcaaatggtgttgcccatagtattg 445  Q
    |||||||||||||   || |||||||| |  ||||  |||||||| ||||||||||||||||   ||||||| |||||||| | ||| | ||||||||||    
T  1480981 ggtgatcttgtaactcaatgtagaagtttactacttaatagacccaactttgtagtgtcgtatgataggaggcaagcaaatagagttactcatagtattg 1481080  T
Q  446 ctagggcatcactatctaatcctagcccccatattttttatcatgtaat---gcctactttgtattccttaattttgaatgaaatgaagtaactttgcct 542  Q
     ||| ||||||||||||      ||||||||||| ||| ||||||||||   ||| ||||| |||   |||||||| ||||||||||| |||||||| ||    
T  1481081 ttagagcatcactatct-----cagcccccatatctttcatcatgtaataaggccgactttctatctgttaatttttaatgaaatgaattaactttgtct 1481175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 392 - 530
Target Start/End: Complemental strand, 54421494 - 54421356
Alignment:
Q  392 actttgtagtgtcgtaaattaggaggtaagcaaatggtgttgcccatagtattgctagggcatcactatctaatcctagcccccatattttttatcatgt 491  Q
    |||||||||||||||  ||| ||||| |||| |||   ||||  |||||||||||||| || ||  ||||  ||||||||||||||||||| ||||||||    
T  54421494 actttgtagtgtcgtttattcggaggcaagctaataaggttggtcatagtattgctagagcttccttatcacatcctagcccccatattttctatcatgt 54421395  T
Q  492 aatgcctactttgtattccttaattttgaatgaaatgaa 530  Q
    ||   |||||||||| || || |||||| |||| |||||    
T  54421394 aacaactactttgtactctttgattttggatgatatgaa 54421356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 235 - 271
Target Start/End: Original strand, 2262648 - 2262684
Alignment:
Q  235 gatgctattaaagtggctatttcaaatgggatgcatg 271  Q
    ||||||||||||||||||||||||||||  |||||||    
T  2262648 gatgctattaaagtggctatttcaaatgaaatgcatg 2262684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 436 - 536
Target Start/End: Original strand, 43733950 - 43734050
Alignment:
Q  436 catagtattgctagggcatcactatctaatcctagcccccatattttttatcatgtaatgcctactttgtattccttaattttgaatgaaatgaagtaac 535  Q
    |||||||||||||| ||  |  ||||| |||||||||||||||| ||| || |||||    |||||| ||||||||| ||| | ||||||||| ||||||    
T  43733950 catagtattgctagagctgccttatctcatcctagcccccatatctttcatgatgtatcttctacttggtattccttgattattaatgaaatgcagtaac 43734049  T
Q  536 t 536  Q
    |    
T  43734050 t 43734050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 141; Significance: 1e-73; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 106 - 530
Target Start/End: Complemental strand, 11355 - 10931
Alignment:
Q  106 tttaataacaattctgttatgggatttggtatgtgctttcgtgactttaagggaactcttttgcttggaaaatcagacttttaccactcatcagccacaa 205  Q
    |||||||| |||||| | ||||| | ||||||||| ||||| |||| || ||| ||| | || ||||| |||||||||||||| ||||||||||||||      
T  11355 tttaataataattctatcatggggtatggtatgtgttttcgcgactatacgggtactttcttacttgggaaatcagacttttatcactcatcagccactg 11256  T
Q  206 tcttggaggccgagtctctaggcttacttgatgctattaaagtggctatttcaaatgggatgcatgctgtactatttgaaacagattcaaaatttttgtc 305  Q
    | |||||||| || ||||||| ||| ||||||| ||||||||||||||||||||||| |||||||| |||| |||||||||| ||||| ||  | ||  |    
T  11255 ttttggaggcagaatctctagccttgcttgatgatattaaagtggctatttcaaatgagatgcatgttgtattatttgaaactgattcgaagatcttagc 11156  T
Q  306 tgatgccatcaactctaattttactctaagcaatgaatttggtgatcttgtaatcaaaagtagaagtctcttactcgatagacccgactttgtagtgtcg 405  Q
    ||||||  ||| |  ||| | | | |  | |||||| ||||| |||||||||| | || |||||||||||||||| |||| ||||||||||| |||||||    
T  11155 tgatgcactcaccaataactcttcccctaccaatgagtttggagatcttgtaacccaatgtagaagtctcttacttgataaacccgactttgcagtgtcg 11056  T
Q  406 taaattaggaggtaagcaaatggtgttgcccatagtattgctagggcatcactatctaatcctagcccccatattttttatcatgtaatgcctactttgt 505  Q
    ||  |||||||| |||||||| ||||||| | |||||||||| | || || |||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  11055 tatgttaggaggcaagcaaatagtgttgctcgtagtattgctcgagcttcgctatctcatcctagcccccatatttttcatcatgtattgcctactttgt 10956  T
Q  506 attccttaattttgaatgaaatgaa 530  Q
    |   | ||||| |||||||||||||    
T  10955 accgcctaattatgaatgaaatgaa 10931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 90; Significance: 4e-43; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 383 - 544
Target Start/End: Complemental strand, 34752783 - 34752622
Alignment:
Q  383 atagacccgactttgtagtgtcgtaaattaggaggtaagcaaatggtgttgcccatagtattgctagggcatcactatctaatcctagcccccatatttt 482  Q
    |||||||||||||||||||||||||  |||||||| |||||||| |  |||| |||||||||||||| |||||||||||| | |||||||||||||| ||    
T  34752783 atagacccgactttgtagtgtcgtatgttaggaggcaagcaaatagaattgctcatagtattgctagagcatcactatctcaccctagcccccatatctt 34752684  T
Q  483 ttatcatgtaatgcctactttgtattccttaattttgaatgaaatgaagtaactttgccttt 544  Q
    | |||||||||  |||||||||||| | |||||||| ||||||||||| |||||||||||||    
T  34752683 tcatcatgtaacacctactttgtatccgttaatttttaatgaaatgaattaactttgccttt 34752622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 384 - 544
Target Start/End: Complemental strand, 9180823 - 9180663
Alignment:
Q  384 tagacccgactttgtagtgtcgtaaattaggaggtaagcaaatggtgttgcccatagtattgctagggcatcactatctaatcctagcccccatattttt 483  Q
    ||||||||||||||||||||||||  |||||||| |||||||| | ||||| |||| ||||||||| |||||||||||| | |||||||||||||| |||    
T  9180823 tagacccgactttgtagtgtcgtatgttaggaggcaagcaaatagagttgctcataatattgctagagcatcactatctcaccctagcccccatatcttt 9180724  T
Q  484 tatcatgtaatgcctactttgtattccttaattttgaatgaaatgaagtaactttgccttt 544  Q
     |||||||||  |||||||||||| | |||||||| ||||||||||| |||||||||||||    
T  9180723 catcatgtaacacctactttgtatccgttaatttttaatgaaatgaactaactttgccttt 9180663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 383 - 540
Target Start/End: Original strand, 11629487 - 11629644
Alignment:
Q  383 atagacccgactttgtagtgtcgtaaattaggaggtaagcaaatggtgttgcccatagtattgctagggcatcactatctaatcctagcccccatatttt 482  Q
    |||||||||||||||||||||||||  |||||||| |||||||| | ||||| |||||||||||||| |||||| ||||| | ||||| |||||||| ||    
T  11629487 atagacccgactttgtagtgtcgtatgttaggaggcaagcaaatagagttgctcatagtattgctagagcatcattatctcaccctaggccccatatctt 11629586  T
Q  483 ttatcatgtaatgcctactttgtattccttaattttgaatgaaatgaagtaactttgc 540  Q
    | ||||||||   |||||||||||| | |||||||| ||||||||||| |||||||||    
T  11629587 tcatcatgtagcacctactttgtatccgttaatttttaatgaaatgaattaactttgc 11629644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 53 - 267
Target Start/End: Complemental strand, 34753113 - 34752899
Alignment:
Q  53 cttggatcaaacctcctgtgggcaagattaaatgcaacgtagatgcagccgcttttaataacaattctgttatgggatttggtatgtgctttcgtgactt 152  Q
    |||||| |||||| ||||| |||| ||| ||||| || ||||||||| | |||||  | || || ||||||||||| | ||||||||| || |||||||     
T  34753113 cttggaccaaaccacctgttggcatgatcaaatgtaatgtagatgcatctgctttcgacaataactctgttatggggtatggtatgtgtttccgtgactc 34753014  T
Q  153 taagggaactcttttgcttggaaaatcagacttttaccactcatcagccacaatcttggaggccgagtctctaggcttacttgatgctattaaagtggct 252  Q
    || |||     | || ||||| ||||||||||| ||| |||||||||||||  | || |||||||||||| ||||| | || |||||||| |||||||||    
T  34753013 tatgggtgtattattacttggcaaatcagacttctactactcatcagccactgttttagaggccgagtctttaggccttctagatgctatcaaagtggct 34752914  T
Q  253 atttcaaatgggatg 267  Q
    || ||| |||| |||    
T  34752913 atctcacatggaatg 34752899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 53 - 268
Target Start/End: Complemental strand, 9181154 - 9180939
Alignment:
Q  53 cttggatcaaacctcctgtgggcaagattaaatgcaacgtagatgcagccgcttttaataacaattctgttatgggatttggtatgtgctttcgtgactt 152  Q
    ||||||||||||| || || |||| ||| ||||| || ||||||||||| |||||  | || || ||||||||| | | ||||||||| || |||||||     
T  9181154 cttggatcaaaccaccggttggcatgatcaaatgtaatgtagatgcagctgctttcgacaataactctgttatgtggtatggtatgtgtttccgtgactc 9181055  T
Q  153 taagggaactcttttgcttggaaaatcagacttttaccactcatcagccacaatcttggaggccgagtctctaggcttacttgatgctattaaagtggct 252  Q
    || |||     | || ||||| ||||||||||| ||| |||||||||||||  | || ||||| |||||| ||||| | || |||||||| |||||||||    
T  9181054 tatgggtgtattattacttggcaaatcagacttctactactcatcagccactgttttagaggctgagtctttaggccttctagatgctatcaaagtggct 9180955  T
Q  253 atttcaaatgggatgc 268  Q
    || ||| |||| ||||    
T  9180954 atctcacatggaatgc 9180939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 53 - 268
Target Start/End: Original strand, 11629157 - 11629372
Alignment:
Q  53 cttggatcaaacctcctgtgggcaagattaaatgcaacgtagatgcagccgcttttaataacaattctgttatgggatttggtatgtgctttcgtgactt 152  Q
    |||||||||||||  | || |||| ||| ||||| || ||||||||||| |||||  | || || ||||||||||| | ||||||||| || |||||||     
T  11629157 cttggatcaaaccatcggttggcatgatcaaatgtaatgtagatgcagctgctttcgacaataactctgttatggggtatggtatgtgtttccgtgactc 11629256  T
Q  153 taagggaactcttttgcttggaaaatcagacttttaccactcatcagccacaatcttggaggccgagtctctaggcttacttgatgctattaaagtggct 252  Q
    || |||     | || ||||  ||||||||||| ||| ||||||| |||||  | || ||||| |||||| ||||| | || |||||||| |||||||||    
T  11629257 tatgggtgtattattacttgataaatcagacttctactactcatcggccactgttttagaggctgagtctttaggccttctagatgctatcaaagtggct 11629356  T
Q  253 atttcaaatgggatgc 268  Q
    || ||| |||| ||||    
T  11629357 atctcacatggaatgc 11629372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 214 - 311
Target Start/End: Complemental strand, 7593712 - 7593613
Alignment:
Q  214 gccgagtctctaggcttactt--gatgctattaaagtggctatttcaaatgggatgcatgctgtactatttgaaacagattcaaaatttttgtctgatgc 311  Q
    ||||||||| ||||||||||   ||| ||||||||||| ||||||||||||| ||||||| |||  | |||||||  ||||  ||| |||||||||||||    
T  7593712 gccgagtctttaggcttactatagattctattaaagtgactatttcaaatggaatgcatgatgtcgtgtttgaaattgatttcaaagttttgtctgatgc 7593613  T

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Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 436 - 540
Target Start/End: Original strand, 10394672 - 10394776
Alignment:
Q  436 catagtattgctagggcatcactatctaatcctagcccccatattttttatcatgtaatgcctactttgtattccttaattttgaatgaaatgaagtaac 535  Q
    |||||||||||||| |||||  ||||| |||||| |||| |||||||| || ||||||   || |||||||    ||||||| |||||||||||| || |    
T  10394672 catagtattgctagcgcatctttatctcatcctaacccctatatttttcatgatgtaacaacttctttgtacatgttaatttggaatgaaatgaattagc 10394771  T
Q  536 tttgc 540  Q
    |||||    
T  10394772 tttgc 10394776  T

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Target: chr6 (Bit Score: 89; Significance: 1e-42; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 384 - 544
Target Start/End: Complemental strand, 10159047 - 10158887
Alignment:
Q  384 tagacccgactttgtagtgtcgtaaattaggaggtaagcaaatggtgttgcccatagtattgctagggcatcactatctaatcctagcccccatattttt 483  Q
    ||||||||||||||||||||||||  |||||||| |||||||| | ||||| |||| ||||||||| |||||||||||| | |||||||||||||| |||    
T  10159047 tagacccgactttgtagtgtcgtatgttaggaggcaagcaaatagagttgctcataatattgctagagcatcactatctcaccctagcccccatatcttt 10158948  T
Q  484 tatcatgtaatgcctactttgtattccttaattttgaatgaaatgaagtaactttgccttt 544  Q
     |||||||||  |||||||||||| | |||||||| ||||||||||| |||||||||||||    
T  10158947 catcatgtaacacctactttgtatccgttaatttttaatgaaatgaactaactttgccttt 10158887  T

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Target: chr6; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 53 - 268
Target Start/End: Complemental strand, 10159378 - 10159163
Alignment:
Q  53 cttggatcaaacctcctgtgggcaagattaaatgcaacgtagatgcagccgcttttaataacaattctgttatgggatttggtatgtgctttcgtgactt 152  Q
    ||||||||||||| || || |||| ||| ||||| || ||||||||||| |||||  | || || ||||||||||| | ||||||||| || |||||||     
T  10159378 cttggatcaaaccaccggttggcatgatcaaatgtaatgtagatgcagctgctttcgacaataactctgttatggggtatggtatgtgtttccgtgactc 10159279  T
Q  153 taagggaactcttttgcttggaaaatcagacttttaccactcatcagccacaatcttggaggccgagtctctaggcttacttgatgctattaaagtggct 252  Q
    || |||     | || ||||| ||||||||||| ||| |||||||||||||  | || ||||| |||||| ||||| | || |||||||| |||||||||    
T  10159278 tatgggtgtattattacttggcaaatcagacttctactactcatcagccactgttttagaggctgagtctttaggccttctagatgctatcaaagtggct 10159179  T
Q  253 atttcaaatgggatgc 268  Q
    || ||| |||| ||||    
T  10159178 atctcacatggaatgc 10159163  T

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Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 467 - 538
Target Start/End: Original strand, 16863312 - 16863383
Alignment:
Q  467 ctagcccccatattttttatcatgtaatgcctactttgtattccttaattttgaatgaaatgaagtaacttt 538  Q
    |||||||||||||||| ||| |||||  || |||||||||||| || ||| ||||||||||| | |||||||    
T  16863312 ctagcccccatattttctataatgtaccgcttactttgtattctttgattatgaatgaaatgcattaacttt 16863383  T

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Target: scaffold0996 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0996
Description:

Target: scaffold0996; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 373 - 529
Target Start/End: Complemental strand, 1652 - 1496
Alignment:
Q  373 ctcttactcgatagacccgactttgtagtgtcgtaaattaggaggtaagcaaatggtgttgcccatagtattgctagggcatcactatctaatcctagcc 472  Q
    ||||| ||| |||||||||||||||||||||||||  || ||||| |||| ||| | ||||| |||||||||||||| || ||  ||| | |||||||||    
T  1652 ctcttgctcaatagacccgactttgtagtgtcgtatgttcggaggcaagctaatagggttgctcatagtattgctagagcttccttatgtcatcctagcc 1553  T
Q  473 cccatattttttatcatgtaatgcctactttgtattccttaattttgaatgaaatga 529  Q
    ||||||||||| ||  ||||    |||||||||| ||||||||| ||||||||||||    
T  1552 cccatatttttaatgttgtaccttctactttgtactccttaattatgaatgaaatga 1496  T

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Target: scaffold0007 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 365 - 460
Target Start/End: Complemental strand, 188492 - 188397
Alignment:
Q  365 gtagaagtctcttactcgatagacccgactttgtagtgtcgtaaattaggaggtaagcaaatggtgttgcccatagtattgctagggcatcactat 460  Q
    ||||||||||||||||   |||||||||||||||||| ||||| ||||||||  ||| |||| | ||||| |||| ||||||||| || |||||||    
T  188492 gtagaagtctcttacttattagacccgactttgtagtatcgtatattaggagacaagtaaatagagttgctcataatattgctagagcctcactat 188397  T

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Target: scaffold0687 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 214 - 311
Target Start/End: Complemental strand, 3060 - 2961
Alignment:
Q  214 gccgagtctctaggcttactt--gatgctattaaagtggctatttcaaatgggatgcatgctgtactatttgaaacagattcaaaatttttgtctgatgc 311  Q
    ||||||||| ||||||||||   ||| ||||||||||| ||||||||||||| ||||||| |||  | |||||||  ||||  ||| |||||||||||||    
T  3060 gccgagtctttaggcttactatagattctattaaagtgactatttcaaatggaatgcatgatgtcgtgtttgaaattgatttcaaagttttgtctgatgc 2961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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