View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1739_high_53 (Length: 292)
Name: NF1739_high_53
Description: NF1739
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1739_high_53 |
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Alignment Details
Target: chr4 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 32667738 - 32668020
Alignment:
| Q |
1 |
agaggctaatttgcattataacatggaagtttcaaatttgtgtgcttgtggattgtatttattgaaggaaacgtgagaattggggtggaaaattttgttg |
100 |
Q |
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| T |
32667738 |
agaggctaatttgcattgtagcatggaagtttcaaatttgtgtgcttgtggattgtatttattgaaggaaacgtgagaattggggtggaaaattttgttg |
32667837 |
T |
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| Q |
101 |
ttagtgacaaacgacttagctataaggttggtacaaaatgttgttgtgtaataattttggggagaaccaattgggttttagtcaaacttatgagtgtacg |
200 |
Q |
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| T |
32667838 |
ttagtgacaaacgacttagctataaggttggtacaaaatgttgttgtgtaataattttggggagaaccaattgggttttagtcaaacttatgagtgtacg |
32667937 |
T |
|
| Q |
201 |
cgttattccactaaagatgcgaatcaatttcatctcattgtacattttaaacccattatattacattattatgatagtattat |
283 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32667938 |
cgttattccactaaagatgcgaatcaatttcatctcattgtacattttaaacccattatattacattattatgatagtattat |
32668020 |
T |
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