View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1739_low_14 (Length: 508)
Name: NF1739_low_14
Description: NF1739
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1739_low_14 |
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Alignment Details
Target: chr8 (Bit Score: 472; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 472; E-Value: 0
Query Start/End: Original strand, 1 - 492
Target Start/End: Original strand, 25840746 - 25841237
Alignment:
| Q |
1 |
aattcaacattctcctgattagccaatgataactccacaaactctacaccccaaagaatccaattatgtgtagcagaggtaggatcatcatgtgtaatag |
100 |
Q |
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| T |
25840746 |
aattcaacattctcctgattagccaatgataactccacaaactctacaccccaaagaatccaattatgtgtagcagaggtaggatcatcatgtgtaatag |
25840845 |
T |
|
| Q |
101 |
aatttctccatggtggtgttccaccattacctctcaaatattttccacaccaacttctcagtttcacgttgaacccttcttttattggttcccattcata |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25840846 |
aatttctccatggtggtgttccaccattacctctcaaatattttccacaccaactcctcagtttcacgttgaacccttcttttattggttcccattcata |
25840945 |
T |
|
| Q |
201 |
tttccagcccaaacccgcgtcgtaatcggcttggacaactttgtttccggtcatgccgaggagaaatggcgtgtctgtcgcggttaggtaacggccgtgg |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |
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| T |
25840946 |
tttccagcccaaacccgcgtcgtaatcggcttggacaactttgtttccggtcatgccgaggagaaatggcgtgtccgtcgcggttaggtaacggccatgg |
25841045 |
T |
|
| Q |
301 |
tggctcctgaggcgtatatggtgaggttttgtttcgaccggttcgattaaccatagtgattttttggttgttccatttctgctctgacggatgttgttgt |
400 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25841046 |
tggctcctgaggcgtatatggtgaggttttgtttcgaccggttcgataaaccatagtgattttttggttgttccatttctgctctgacggatgttgttgt |
25841145 |
T |
|
| Q |
401 |
tgtcttcatctgctactaggtacttccctaggtggctgcgtagtttcacagcctttgatttgttgaaatactccattttactaattgtgttg |
492 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
25841146 |
tgtcttcatctgctactaggtacttccctaggtggctgcgtagtttcacagcctttgatttgttgaaatactccattttactagttgtgttg |
25841237 |
T |
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