View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1739_low_88 (Length: 246)

Name: NF1739_low_88
Description: NF1739
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1739_low_88
NF1739_low_88
[»] chr7 (25 HSPs)
chr7 (9-101)||(47742220-47742312)
chr7 (9-101)||(10706008-10706100)
chr7 (9-101)||(18109047-18109139)
chr7 (9-101)||(42503068-42503160)
chr7 (9-101)||(15069580-15069672)
chr7 (9-101)||(47064524-47064616)
chr7 (9-98)||(604530-604619)
chr7 (9-101)||(19045057-19045149)
chr7 (9-101)||(20709487-20709579)
chr7 (9-101)||(12111974-12112066)
chr7 (9-98)||(34623249-34623338)
chr7 (9-98)||(30790238-30790328)
chr7 (9-98)||(43620431-43620521)
chr7 (9-98)||(45767092-45767182)
chr7 (133-182)||(47064427-47064476)
chr7 (133-182)||(12112114-12112163)
chr7 (133-182)||(18108910-18108959)
chr7 (137-182)||(19045201-19045246)
chr7 (137-182)||(20709390-20709435)
chr7 (139-182)||(604711-604754)
chr7 (139-182)||(15069452-15069495)
chr7 (139-182)||(42502968-42503011)
chr7 (139-182)||(43620591-43620634)
chr7 (139-182)||(45766941-45766984)
chr7 (141-182)||(10706155-10706196)
[»] chr1 (47 HSPs)
chr1 (9-101)||(37018626-37018718)
chr1 (9-101)||(12643956-12644048)
chr1 (9-101)||(50114072-50114164)
chr1 (9-101)||(33168665-33168757)
chr1 (9-101)||(41456459-41456551)
chr1 (9-101)||(44469241-44469333)
chr1 (16-101)||(5081589-5081674)
chr1 (9-101)||(4517624-4517716)
chr1 (9-101)||(13633102-13633194)
chr1 (9-101)||(36073121-36073213)
chr1 (9-101)||(9711326-9711417)
chr1 (9-101)||(46978464-46978556)
chr1 (10-101)||(19495806-19495897)
chr1 (9-101)||(7966739-7966831)
chr1 (9-101)||(51665896-51665988)
chr1 (9-101)||(1655310-1655402)
chr1 (26-101)||(1180375-1180450)
chr1 (9-98)||(3944726-3944816)
chr1 (9-98)||(3993074-3993164)
chr1 (9-79)||(8459708-8459778)
chr1 (9-98)||(29352984-29353074)
chr1 (133-182)||(36073261-36073310)
chr1 (9-98)||(20353167-20353257)
chr1 (9-98)||(38772382-38772472)
chr1 (133-182)||(5081488-5081537)
chr1 (133-182)||(13177289-13177338)
chr1 (133-182)||(50114217-50114266)
chr1 (133-176)||(44469148-44469191)
chr1 (133-180)||(46978369-46978416)
chr1 (140-182)||(1655212-1655254)
chr1 (133-182)||(12644988-12645037)
chr1 (133-182)||(19495945-19495994)
chr1 (133-182)||(37018471-37018520)
chr1 (133-182)||(41456328-41456377)
chr1 (133-178)||(51665803-51665848)
chr1 (140-182)||(1180505-1180547)
chr1 (133-179)||(33168805-33168851)
chr1 (133-178)||(4517531-4517576)
chr1 (64-101)||(13177386-13177423)
chr1 (139-182)||(13632978-13633021)
chr1 (133-182)||(7966879-7966928)
chr1 (133-170)||(9711511-9711548)
chr1 (139-182)||(3944918-3944961)
chr1 (139-182)||(20353018-20353061)
chr1 (139-182)||(29353144-29353187)
chr1 (139-182)||(38772570-38772613)
chr1 (139-171)||(3992980-3993012)
[»] chr4 (21 HSPs)
chr4 (9-98)||(37394436-37394525)
chr4 (9-101)||(18579384-18579476)
chr4 (9-100)||(38461176-38461267)
chr4 (9-101)||(3407469-3407561)
chr4 (9-101)||(10374772-10374864)
chr4 (9-101)||(4773835-4773927)
chr4 (9-101)||(11506324-11506416)
chr4 (26-98)||(6187450-6187522)
chr4 (9-101)||(44050323-44050415)
chr4 (9-98)||(19069951-19070041)
chr4 (133-182)||(4773738-4773787)
chr4 (136-182)||(44050226-44050272)
chr4 (9-98)||(49564593-49564683)
chr4 (133-182)||(10374914-10374963)
chr4 (133-182)||(38461316-38461365)
chr4 (133-179)||(3407351-3407397)
chr4 (133-182)||(51642456-51642506)
chr4 (137-182)||(24416069-24416114)
chr4 (133-182)||(11506228-11506276)
chr4 (139-182)||(19070113-19070156)
chr4 (139-182)||(49564785-49564828)
[»] scaffold0169 (2 HSPs)
scaffold0169 (9-101)||(10494-10586)
scaffold0169 (133-181)||(10400-10448)
[»] chr6 (21 HSPs)
chr6 (9-101)||(23959645-23959737)
chr6 (9-101)||(31150295-31150387)
chr6 (9-97)||(28361951-28362039)
chr6 (9-101)||(29286953-29287045)
chr6 (9-76)||(25140360-25140427)
chr6 (10-101)||(2259836-2259927)
chr6 (9-101)||(18609566-18609658)
chr6 (9-101)||(29667053-29667145)
chr6 (9-98)||(1609045-1609135)
chr6 (133-182)||(25140276-25140325)
chr6 (133-182)||(29287090-29287139)
chr6 (133-180)||(31149881-31149928)
chr6 (133-182)||(23959785-23959834)
chr6 (133-182)||(28361836-28361885)
chr6 (140-182)||(18609466-18609508)
chr6 (133-182)||(29666956-29667005)
chr6 (38-100)||(19133454-19133516)
chr6 (133-182)||(2259974-2260023)
chr6 (41-101)||(34231280-34231339)
chr6 (133-182)||(19133524-19133573)
chr6 (133-182)||(34231385-34231434)
[»] chr5 (29 HSPs)
chr5 (9-101)||(27864154-27864246)
chr5 (9-101)||(1039022-1039114)
chr5 (9-101)||(25891987-25892079)
chr5 (9-101)||(13564391-13564483)
chr5 (9-101)||(11029758-11029850)
chr5 (9-101)||(38856466-38856558)
chr5 (9-98)||(7018249-7018338)
chr5 (9-101)||(4197271-4197363)
chr5 (9-101)||(7797328-7797420)
chr5 (9-101)||(28882739-28882831)
chr5 (9-101)||(33994379-33994471)
chr5 (9-101)||(37815333-37815425)
chr5 (9-100)||(24050789-24050881)
chr5 (9-98)||(14280210-14280300)
chr5 (133-182)||(7797468-7797517)
chr5 (9-101)||(24053913-24054006)
chr5 (133-180)||(27864296-27864343)
chr5 (133-182)||(1038917-1038966)
chr5 (133-182)||(24054054-24054103)
chr5 (133-182)||(28882889-28882938)
chr5 (133-176)||(25892129-25892172)
chr5 (135-179)||(4197413-4197457)
chr5 (133-182)||(7018411-7018460)
chr5 (133-182)||(13564559-13564607)
chr5 (136-177)||(43179004-43179045)
chr5 (139-182)||(11029909-11029952)
chr5 (139-182)||(38856647-38856690)
chr5 (140-182)||(37815507-37815549)
chr5 (133-182)||(30353319-30353368)
[»] chr8 (28 HSPs)
chr8 (9-101)||(23924709-23924801)
chr8 (9-101)||(31959277-31959369)
chr8 (9-101)||(2124945-2125037)
chr8 (9-98)||(35963051-35963142)
chr8 (11-101)||(7171544-7171634)
chr8 (9-101)||(43376509-43376601)
chr8 (10-101)||(22660803-22660894)
chr8 (9-94)||(43680152-43680236)
chr8 (9-68)||(40208-40267)
chr8 (9-101)||(22587676-22587764)
chr8 (9-98)||(7343788-7343878)
chr8 (9-98)||(32376403-32376493)
chr8 (133-182)||(31959184-31959233)
chr8 (9-98)||(8420156-8420246)
chr8 (9-98)||(30301886-30301976)
chr8 (133-182)||(2125085-2125134)
chr8 (133-182)||(22587579-22587628)
chr8 (133-182)||(23924858-23924907)
chr8 (133-182)||(35963197-35963246)
chr8 (133-182)||(43376412-43376461)
chr8 (137-182)||(43680295-43680340)
chr8 (133-182)||(22660708-22660757)
chr8 (133-182)||(40352-40401)
chr8 (136-182)||(7171439-7171485)
chr8 (139-182)||(7343641-7343684)
chr8 (139-182)||(8420312-8420355)
chr8 (139-182)||(30302066-30302109)
chr8 (139-182)||(32376583-32376626)
[»] chr3 (33 HSPs)
chr3 (9-101)||(2744206-2744298)
chr3 (9-101)||(46990277-46990369)
chr3 (9-101)||(67634-67726)
chr3 (9-101)||(36813606-36813698)
chr3 (9-101)||(48247162-48247254)
chr3 (9-101)||(9427356-9427448)
chr3 (9-101)||(16448284-16448376)
chr3 (10-79)||(4001744-4001813)
chr3 (9-101)||(6502023-6502115)
chr3 (9-79)||(50956931-50957001)
chr3 (10-97)||(21952555-21952642)
chr3 (9-98)||(6744558-6744648)
chr3 (9-98)||(3952446-3952536)
chr3 (9-98)||(8157260-8157350)
chr3 (9-98)||(13744017-13744107)
chr3 (9-98)||(14402237-14402327)
chr3 (9-98)||(30943942-30944032)
chr3 (133-182)||(67776-67825)
chr3 (133-182)||(48247324-48247373)
chr3 (133-182)||(46990419-46990468)
chr3 (136-182)||(2744361-2744407)
chr3 (133-182)||(6502163-6502212)
chr3 (138-182)||(36813973-36814017)
chr3 (141-182)||(21952702-21952743)
chr3 (139-182)||(9427508-9427551)
chr3 (139-182)||(16448181-16448224)
chr3 (38-98)||(35443901-35443961)
chr3 (139-182)||(3952305-3952348)
chr3 (139-182)||(6744449-6744492)
chr3 (139-182)||(8157438-8157481)
chr3 (139-182)||(13744177-13744220)
chr3 (139-182)||(14402124-14402167)
chr3 (139-182)||(30944099-30944142)
[»] chr2 (42 HSPs)
chr2 (9-101)||(3796101-3796193)
chr2 (9-101)||(24753255-24753347)
chr2 (9-101)||(7266674-7266766)
chr2 (9-101)||(81480-81572)
chr2 (9-101)||(24602402-24602494)
chr2 (9-101)||(24611620-24611712)
chr2 (9-101)||(39797670-39797762)
chr2 (9-101)||(41182161-41182253)
chr2 (9-101)||(43944452-43944544)
chr2 (9-101)||(438981-439073)
chr2 (9-101)||(1097334-1097426)
chr2 (9-101)||(45479042-45479134)
chr2 (9-98)||(38949419-38949508)
chr2 (9-101)||(9659269-9659361)
chr2 (9-101)||(28343273-28343365)
chr2 (9-101)||(41005287-41005379)
chr2 (9-98)||(5350963-5351053)
chr2 (9-98)||(10620725-10620815)
chr2 (9-98)||(41563722-41563812)
chr2 (133-182)||(438860-438909)
chr2 (133-182)||(24753166-24753215)
chr2 (133-182)||(41005427-41005476)
chr2 (133-182)||(43944592-43944641)
chr2 (9-98)||(209737-209827)
chr2 (136-182)||(1097477-1097523)
chr2 (133-182)||(81383-81432)
chr2 (133-182)||(3796251-3796300)
chr2 (140-182)||(28343453-28343495)
chr2 (133-182)||(9659128-9659177)
chr2 (9-57)||(12906280-12906328)
chr2 (133-180)||(45478911-45478958)
chr2 (140-182)||(41182309-41182351)
chr2 (133-178)||(24602542-24602587)
chr2 (133-178)||(24611527-24611572)
chr2 (139-182)||(39797532-39797575)
chr2 (139-182)||(209897-209940)
chr2 (139-182)||(5350828-5350871)
chr2 (139-182)||(10620911-10620954)
chr2 (139-182)||(38949328-38949371)
chr2 (139-182)||(41563575-41563618)
chr2 (38-101)||(43668894-43668957)
chr2 (139-176)||(7266548-7266585)
[»] scaffold0116 (2 HSPs)
scaffold0116 (9-101)||(15185-15277)
scaffold0116 (137-182)||(15054-15099)
[»] scaffold0201 (2 HSPs)
scaffold0201 (9-98)||(23165-23254)
scaffold0201 (144-182)||(23283-23321)
[»] scaffold0219 (1 HSPs)
scaffold0219 (9-101)||(19164-19256)
[»] scaffold0057 (2 HSPs)
scaffold0057 (9-101)||(22389-22481)
scaffold0057 (133-182)||(22529-22578)
[»] scaffold0794 (2 HSPs)
scaffold0794 (9-101)||(981-1073)
scaffold0794 (133-182)||(885-933)
[»] scaffold0494 (2 HSPs)
scaffold0494 (9-98)||(4558-4648)
scaffold0494 (139-182)||(4443-4486)
[»] scaffold0341 (1 HSPs)
scaffold0341 (133-182)||(13826-13875)


Alignment Details
Target: chr7 (Bit Score: 89; Significance: 5e-43; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 47742312 - 47742220
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47742312 aaaattaaatggaatgtaataacgaataaatcaaatgcgtaaacattaataagctataaataagtattgcactagtttcaccacataaaagtc 47742220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 10706008 - 10706100
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  10706008 aaaattaaatgaaatgtaataacgaataaatcaaatgcgtaaacattaataacgaataaataagtattgcactagtttcaccacataaaagtc 10706100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 18109139 - 18109047
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||| || ||||||||||||||||||    
T  18109139 aaaattaaatggaatgtaataacgaataaatgaaatgcgtaaacattaaaaagctataaataagtattgcattattttcaccacataaaagtc 18109047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 42503160 - 42503068
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||| || ||||||||||||||||||    
T  42503160 aaaattaaatggaatgtaataacgaataaatgaaatgcgtaaacattaaaaagctataaataagtattgcattattttcaccacataaaagtc 42503068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 15069672 - 15069580
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||| ||  |||||||||||||||||    
T  15069672 aaaattaaatggaatgtaataacgaataaatgaaatgcgtaaacattaaaaagctataaataagtattgcattatgttcaccacataaaagtc 15069580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 47064616 - 47064524
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||   |||||||| |||||||||||||||||||||||||||||    
T  47064616 aaaattaaatgaaatgtaataacgaataaatcaaatgcgtaaacattaataacgaataaataattattgcactagtttcaccacataaaagtc 47064524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 604530 - 604619
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaa 98  Q
    ||||||||||||||||||||||||||||||| ||||||| | ||||||| ||||||||||||||||||||| || |||||||||||||||    
T  604530 aaaattaaatggaatgtaataacgaataaatgaaatgcggaaacattaaaaagctataaataagtattgcattattttcaccacataaaa 604619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 19045057 - 19045149
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||| ||||||   |||||| |||||||||||||||||||||||||||||||    
T  19045057 aaaattaaatgaaatgtaataacgaataaatcaaatgcgtaaacactaataacgaataaatcagtattgcactagtttcaccacataaaagtc 19045149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 20709579 - 20709487
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||| ||||||   |||||| |||||||||||||||||||||||||||||||    
T  20709579 aaaattaaatgaaatgtaataacgaataaatcaaatgcgtaaacactaataacgaataaatcagtattgcactagtttcaccacataaaagtc 20709487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 12111974 - 12112066
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||| ||||| ||||||||||| ||||||||||||||||| ||||||||||   ||||||||||||||||||||||| ||||||||||||||    
T  12111974 aaaataaaatgaaatgtaataacaaataaatcaaatgcgtaaacattaataacgaataaataagtattgcactagtttaaccacataaaagtc 12112066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 34623249 - 34623338
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaa 98  Q
    ||||||||||| |||||||||||||||||||||| || ||| ||||||||||   ||||||||||||||||||||||||| |||||||||    
T  34623249 aaaattaaatgaaatgtaataacgaataaatcaagtgagtaaacattaataatgaataaataagtattgcactagtttcatcacataaaa 34623338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 30790328 - 30790238
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 98  Q
    ||||||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  30790328 aaaattaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 30790238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 43620431 - 43620521
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 98  Q
    ||||||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  43620431 aaaattaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 43620521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 45767182 - 45767092
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 98  Q
    ||||||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  45767182 aaaattaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 45767092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 47064476 - 47064427
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47064476 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 47064427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 12112114 - 12112163
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  12112114 tggccaaaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 12112163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 18108959 - 18108910
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  18108959 tggccacaaaaaattgacgttacaatttcgaccccaaaaaatacgtcggt 18108910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 137 - 182
Target Start/End: Original strand, 19045201 - 19045246
Alignment:
Q  137 cacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  19045201 cacaaaaaattggtgttacaatttcgaccccaaaatatacgtcggt 19045246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 137 - 182
Target Start/End: Complemental strand, 20709435 - 20709390
Alignment:
Q  137 cacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  20709435 cacaaaaaattggtgttacaatttcgaccccaaaatatacgtcggt 20709390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 604711 - 604754
Alignment:
Q  139 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||||||||||||||||||||| |||| |||||    
T  604711 caaaaaattggcgttacaatttcgaccccaaaaaatacatcggt 604754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 182
Target Start/End: Complemental strand, 15069495 - 15069452
Alignment:
Q  139 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||||||||||||||||||||| |||| |||||    
T  15069495 caaaaaattggcgttacaatttcgaccccaaaaaatacatcggt 15069452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 182
Target Start/End: Complemental strand, 42503011 - 42502968
Alignment:
Q  139 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||||||||||||||||||||| |||| |||||    
T  42503011 caaaaaattggcgttacaatttcgaccccaaaaaatacatcggt 42502968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 43620591 - 43620634
Alignment:
Q  139 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  43620591 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 43620634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 182
Target Start/End: Complemental strand, 45766984 - 45766941
Alignment:
Q  139 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  45766984 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 45766941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 182
Target Start/End: Original strand, 10706155 - 10706196
Alignment:
Q  141 aaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||| | |||||||||||||||||||||||||| ||||||    
T  10706155 aaaaatcgacgttacaatttcgaccccaaaatatatgtcggt 10706196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 5e-43; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 37018718 - 37018626
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37018718 aaaattaaatggaatgtaataacgaataaatcaaatgcgtaaacattaataagctataaataagtattgcactagtttcaccacataaaagtc 37018626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 12643956 - 12644048
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12643956 aaaattaaatggaatgtaataacgaataaatcaaatgcgtaaacattaataagctataaataagtattgcattagtttcaccacataaaagtc 12644048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 50114072 - 50114164
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  50114072 aaaattaaatggaatgtaataacgaataaatcaaatgcgtaaacattaataagctataaataagtattgcattagtttcaccacataaaagtc 50114164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 33168665 - 33168757
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33168665 aaaattaaatgaaatgtaataacgaataaatcaaatgcgtaagcattaataagctataaataagtattgcactagtttcaccacataaaagtc 33168757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 41456551 - 41456459
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  41456551 aaaattaaatggaatgtaataacgaataaatcaaatgcgtaaacattaataagctataaataagtattgcattattttcaccacataaaagtc 41456459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 44469333 - 44469241
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  44469333 aaaattaaatggaatgtaataatgaataaatcaaatgcgtaaacattaataagctataaataagtattgcattagtttcaccacataaaagtc 44469241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 5081674 - 5081589
Alignment:
Q  16 aatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  5081674 aatgtaatgtaataacgaataaatcaaatgcgtaaacattaataagctataaataagtattgcactagttttaccacataaaagtc 5081589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 4517716 - 4517624
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  4517716 aaaattaaatgaaatgtaataacgaataaatcaaatgcgtaaacattaataacgaataaataagtattgcactagtttcaccacataaaagtc 4517624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 13633194 - 13633102
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||| || ||||||||||||||||||    
T  13633194 aaaattaaatggaatgtaataacgaataaatgaaatgcgtaaacattaaaaagctataaataagtattgcattattttcaccacataaaagtc 13633102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 36073121 - 36073213
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  36073121 aaaattaaatgaaatgtaataacgaataaatcaaatgcgtaaacattaataacgaataaataagtattgcactagtttcaccacataaaagtc 36073213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 9711326 - 9711417
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    |||||||||| |||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  9711326 aaaattaaattgaatgtaataacaaataaatcaaatgcgtaaacat-aataagctataaataagtattgcactaatttcaccacataaaagtc 9711417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 46978556 - 46978464
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||| ||||||||||||||||||||||||| ||| ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  46978556 aaaattaaatgaaatgtaataacgaataaatcaaatgtgtaaacattaataacgaataaataagtattgcactagtttcaccacataaaagtc 46978464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 19495806 - 19495897
Alignment:
Q  10 aaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    |||||||||| ||||||||||||||||||||||||||||| | ||||||||   ||||||||||||||||||||||||||||||||||||||    
T  19495806 aaattaaatgaaatgtaataacgaataaatcaaatgcgtaaatattaataacgaataaataagtattgcactagtttcaccacataaaagtc 19495897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 7966739 - 7966831
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||| |||||||||||||||||||||| |||||| | ||||||||   ||||||||||||||||||||||||||||||||||||||    
T  7966739 aaaattaaatgaaatgtaataacgaataaatcaagtgcgtaaatattaataacaaataaataagtattgcactagtttcaccacataaaagtc 7966831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 51665988 - 51665896
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||| |||||||||||||||||||||| |||||| |||||||| |   |||||||||||| |||||||||||||||||||||||||    
T  51665988 aaaattaaatgaaatgtaataacgaataaatcaattgcgtagacattaatgacgaataaataagtatggcactagtttcaccacataaaagtc 51665896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 1655402 - 1655310
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||| |||||||||| ||||||||||| |||||| ||||||||||   |||||||| |||||||||||||| | ||||||||||||    
T  1655402 aaaattaaatgaaatgtaataatgaataaatcaagtgcgtaaacattaataacgaataaataaatattgcactagttttatcacataaaagtc 1655310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 26 - 101
Target Start/End: Original strand, 1180375 - 1180450
Alignment:
Q  26 aataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    |||||||||||||||||||| ||| ||||||||||   |||||||||||||||| |||||||||||||||||||||    
T  1180375 aataacgaataaatcaaatgagtaaacattaataacgaataaataagtattgcaatagtttcaccacataaaagtc 1180450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 3944726 - 3944816
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 98  Q
    ||||||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  3944726 aaaattaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 3944816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 3993164 - 3993074
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 98  Q
    ||||||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  3993164 aaaattaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 3993074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 8459708 - 8459778
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgca 79  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||   ||||||||||||||||    
T  8459708 aaaattaaatgaaatgtaataacgaataaatcaaatgcgtaaacattaataacgaataaataagtattgca 8459778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 29352984 - 29353074
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 98  Q
    ||||||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  29352984 aaaattaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 29353074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 36073261 - 36073310
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36073261 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 36073310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 20353257 - 20353167
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 98  Q
    ||||||||||||||||||||| ||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  20353257 aaaattaaatggaatgtaatatcgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 20353167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 38772382 - 38772472
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 98  Q
    ||||||||||||||||||||||||||||||| |||||| | | ||||||| || |||||||| ||||||||| || |||| ||||||||||    
T  38772382 aaaattaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaaactataaattagtattgcattattttctccacataaaa 38772472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 5081537 - 5081488
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  5081537 tggccacaaaaaattggcgttacaatttcgaccccaaaaaatacgtcggt 5081488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 13177338 - 13177289
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  13177338 tggccacaaaaaattggcgttacaatttggaccccaaaatatacgtcggt 13177289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 50114217 - 50114266
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  50114217 tggccacaaaaaattggcgttacaatttcgaccccaaaatatatgtcggt 50114266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 44469191 - 44469148
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatac 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  44469191 tggccacaaaaaattggcgttacaatttcgaccccaaaatatac 44469148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 46978416 - 46978369
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcg 180  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  46978416 tggccacaaaaaatttgcgttacaatttcgaccccaaaatatacgtcg 46978369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 182
Target Start/End: Complemental strand, 1655254 - 1655212
Alignment:
Q  140 aaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  1655254 aaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 1655212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 12644988 - 12645037
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  12644988 tggccacaaaaaattgacgttataatttcgaccccaaaatatacgtcggt 12645037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 19495945 - 19495994
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  19495945 tggccacaaaaaattggcgttacaatttcgacgccaaaatacacgtcggt 19495994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 37018520 - 37018471
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  37018520 tggccacaaaaaattggcattacaatttcgaccccaaaatatatgtcggt 37018471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 41456377 - 41456328
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  41456377 tggccacaaaaaattggcgttacaatttagaccccaaaaaatacgtcggt 41456328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 51665848 - 51665803
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgt 178  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  51665848 tggccacgaaaaattggcgttacaatttcgaccccaaaatatacgt 51665803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 182
Target Start/End: Original strand, 1180505 - 1180547
Alignment:
Q  140 aaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  1180505 aaaaaattggcgttacaatttcgaccccaaaatatatgtcggt 1180547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 33168805 - 33168851
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtc 179  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||    
T  33168805 tggccacaaaaaattggcgttacaatttcgaccttaaaatatacgtc 33168851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 4517576 - 4517531
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgt 178  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||    
T  4517576 tggccacaaaaaatcggcgttacaatttcgaccccaaattatacgt 4517531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 13177423 - 13177386
Alignment:
Q  64 ataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||||||||||||||||||||||||||||||    
T  13177423 ataaataagtattgcactagtttcaccacataaaagtc 13177386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 182
Target Start/End: Complemental strand, 13633021 - 13632978
Alignment:
Q  139 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||||||||||||||||||||| |||| |||||    
T  13633021 caaaaaattggcgttacaatttcgaccccaaaaaatacatcggt 13632978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 7966879 - 7966928
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||  ||||||| |||||||||||||||||||||||||| ||||||    
T  7966879 tggccactgaaaattgacgttacaatttcgaccccaaaatatatgtcggt 7966928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 170
Target Start/End: Original strand, 9711511 - 9711548
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaa 170  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  9711511 tggccacaaaaaattggcgttacaatttcgaccacaaa 9711548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 3944918 - 3944961
Alignment:
Q  139 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  3944918 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 3944961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 182
Target Start/End: Complemental strand, 20353061 - 20353018
Alignment:
Q  139 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  20353061 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 20353018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 29353144 - 29353187
Alignment:
Q  139 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  29353144 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 29353187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 38772570 - 38772613
Alignment:
Q  139 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  38772570 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 38772613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 171
Target Start/End: Complemental strand, 3993012 - 3992980
Alignment:
Q  139 caaaaaattggcgttacaatttcgaccccaaaa 171  Q
    |||||||||||||||||||||||||||| ||||    
T  3993012 caaaaaattggcgttacaatttcgacccaaaaa 3992980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 86; Significance: 3e-41; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 37394525 - 37394436
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaa 98  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  37394525 aaaattaaatggaatgtaataacgaataaatcaaatgcgtaaacattaataagctataaataagtattgcactagtttcaccacataaaa 37394436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 18579384 - 18579476
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||| ||||||||||||||||||||||||| ||| ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  18579384 aaaattaaatgaaatgtaataacgaataaatcaaatgagtaaacattaataacgaataaataagtattgcactagtttcaccacataaaagtc 18579476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 38461176 - 38461267
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagt 100  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||   |||||||||||||||| ||||||||||||||||||||    
T  38461176 aaaattaaatgaaatgtaataacgaataaatcaaatgcgtaaacattaataacaaataaataagtattgcattagtttcaccacataaaagt 38461267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 3407561 - 3407469
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||| || |||||||||||||||||| || |||||||| |||||||||    
T  3407561 aaaattaaatggaatgtaataacgaataaatgaaatgcgtaaacattaaaaaactataaataagtattgcattattttcaccaaataaaagtc 3407469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 10374772 - 10374864
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||   |||||||| |||||||||||||||||||||||| ||||    
T  10374772 aaaattaaatgaaatgtaataacgaataaatcaaatgcgtaaacattaataacgaataaataactattgcactagtttcaccacataacagtc 10374864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 4773927 - 4773835
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||| ||||| |||||||||||||||||||||| |||||| ||||||||||   |||||||||||||||| |||||||||||||||||||||    
T  4773927 aaaatgaaatgaaatgtaataacgaataaatcaagtgcgtaaacattaataacgaataaataagtattgcattagtttcaccacataaaagtc 4773835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 11506416 - 11506324
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||| ||| ||||||||||||||||||||||||||||| ||||||||||   |||||||||||| ||| |||||||||||||||||||||    
T  11506416 aaaattatatgaaatgtaataacgaataaatcaaatgcgtaaacattaataacgaataaataagtatcgcattagtttcaccacataaaagtc 11506324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 26 - 98
Target Start/End: Original strand, 6187450 - 6187522
Alignment:
Q  26 aataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaa 98  Q
    |||||||||||||||||||||||| ||||||||||   |||||||||||||||||||||||||||||||||||    
T  6187450 aataacgaataaatcaaatgcgtaaacattaataacaaataaataagtattgcactagtttcaccacataaaa 6187522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 44050415 - 44050323
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||| |||||||||||||||||||||| |||||| | ||||||||   ||||||||||||||||||||||||| || |||||||||    
T  44050415 aaaattaaatgaaatgtaataacgaataaatcaagtgcgtaaatattaataacaaataaataagtattgcactagtttcatcaaataaaagtc 44050323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 19069951 - 19070041
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 98  Q
    ||||||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  19069951 aaaattaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 19070041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 4773787 - 4773738
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4773787 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 4773738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 136 - 182
Target Start/End: Complemental strand, 44050272 - 44050226
Alignment:
Q  136 ccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  44050272 ccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 44050226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 49564593 - 49564683
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 98  Q
    ||||||||||||||| ||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  49564593 aaaattaaatggaatttaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 49564683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 10374914 - 10374963
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10374914 tggccacaaaaaattggcgttacaatttcgaccctaaaatatacgtcggt 10374963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 38461316 - 38461365
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  38461316 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacttcggt 38461365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 3407397 - 3407351
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtc 179  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  3407397 tggccacaaaaaattggcgttacaatttcgaccccaaaaaatacgtc 3407351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 51642456 - 51642506
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgacccc-aaaatatacgtcggt 182  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  51642456 tggccacaaaaaattggcgttacaatttcgaccccaaaaatatacgtcggt 51642506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 182
Target Start/End: Original strand, 24416069 - 24416114
Alignment:
Q  137 cacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||    
T  24416069 cacaaaaaattagcgttacaatttcgaccccaaaatatatgtcggt 24416114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 11506276 - 11506228
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||||| || |||||||||| ||||||||||||||||||    
T  11506276 tggccacaaaaaattggtgtcacaatttcga-cccaaaatatacgtcggt 11506228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 19070113 - 19070156
Alignment:
Q  139 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  19070113 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 19070156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 49564785 - 49564828
Alignment:
Q  139 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  49564785 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 49564828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 10586 - 10494
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10586 aaaattaaatgaaatgtaataacgaataaatcaaatgcgtaaacattaataagctataaataagtattgcactagtttcaccacataaaagtc 10494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 10448 - 10400
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcgg 181  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  10448 tggccacaaaaaattggcgttacaatttcaaccccaaaatatatgtcgg 10400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 1e-40; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 23959645 - 23959737
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23959645 aaaattaaatgaaatgtaataacgaataaatcaaatgcgtaaacattaataagctataaataagtattgcactagtttcaccacataaaagtc 23959737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 31150387 - 31150295
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  31150387 aaaattaaatggaatgtaataacgaataattcaaatgtgtaaacattaataagctataaacaagtattgcactagtttcaccacataaaagtc 31150295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 28362039 - 28361951
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaa 97  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| || ||||||||||||||    
T  28362039 aaaattaaatggaatgtaataacgaataaatcaaatgcgtaaacattaataagctataaataattattgcattattttcaccacataaa 28361951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 29286953 - 29287045
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||| ||||||||||||||||||| || |||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  29286953 aaaattaaatgaaatgtaataacgaataaataaagtgcgtaaacattaataatgaataaataagtattgcactagtttcaccacataaaagtc 29287045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 25140427 - 25140360
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtatt 76  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  25140427 aaaattaaatggaatgtaataacgaataaatcaaatgcgtaaacattaataagctataaataagtatt 25140360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 2259836 - 2259927
Alignment:
Q  10 aaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    |||||||||| ||||||||||||||||||||||||| ||| ||||||||||   |||||||||||||||| ||||||||||| |||||||||    
T  2259836 aaattaaatgaaatgtaataacgaataaatcaaatgtgtaaacattaataacgaataaataagtattgcattagtttcaccatataaaagtc 2259927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 18609658 - 18609566
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||| |||||||||||||||||||||||| |||| ||||||||||   |||||||| ||||||||| |||| |||| |||||||||    
T  18609658 aaaattaaatgaaatgtaataacgaataaatcaaatccgtaaacattaataatgaataaataaatattgcacttgttttaccatataaaagtc 18609566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 29667145 - 29667053
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||| |||||||||||||||||||||| || ||| ||||||||||   |||||||| |||||||| |||||||||| |||||||||    
T  29667145 aaaattaaatgaaatgtaataacgaataaatcaagtgtgtaaacattaataacgaataaataaatattgcacgagtttcaccatataaaagtc 29667053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 1609045 - 1609135
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 98  Q
    ||||||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  1609045 aaaattaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 1609135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 25140325 - 25140276
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25140325 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 25140276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 29287090 - 29287139
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29287090 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 29287139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 31149928 - 31149881
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcg 180  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  31149928 tggccataaaaaattggcgttacaatttcgaccccaaaatatacgtcg 31149881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 23959785 - 23959834
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  23959785 tggccacaaaaaattggagttacaatttcgaccccaaaatacacgtcggt 23959834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 28361885 - 28361836
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  28361885 tggccacaaaaaattggcgttacaatttcgatcccaaaaaatacgtcggt 28361836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 182
Target Start/End: Complemental strand, 18609508 - 18609466
Alignment:
Q  140 aaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  18609508 aaaaaattggcgttacaatttcgatcccaaaatatacgtcggt 18609466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 29667005 - 29666956
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||||| ||||||||||||| || |||||||||||||||    
T  29667005 tggccacaaaaaattggtgttacaatttcgatcctaaaatatacgtcggt 29666956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 100
Target Start/End: Original strand, 19133454 - 19133516
Alignment:
Q  38 atcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagt 100  Q
    |||||||| ||| ||||||||||   ||||| |||||||||||||||| ||||||||||||||    
T  19133454 atcaaatgtgtaaacattaataacgaataaaaaagtattgcactagttccaccacataaaagt 19133516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 2259974 - 2260023
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||| ||||||||||| |||||||||||||  ||||||||||||||||||    
T  2259974 tggcaacaaaaaattgccgttacaatttcgctcccaaaatatacgtcggt 2260023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 34231280 - 34231339
Alignment:
Q  41 aaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    |||||| || |||||||||||  |||||||||||| ||||||||||||||||| |||||||    
T  34231280 aaatgcataaacattaataaggaataaataagtat-gcactagtttcaccacaaaaaagtc 34231339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 19133524 - 19133573
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||| |||| |||||||||||| |||||||||||| ||| ||||||    
T  19133524 tggccacacaaaaatggcgttacaatatcgaccccaaaaaatatgtcggt 19133573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 34231385 - 34231434
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||| ||||||||| ||||||||||| || |||||||||| |||||||    
T  34231385 tggccataaaaaattgacgttacaattttgatcccaaaatattcgtcggt 34231434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 1e-40; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 27864154 - 27864246
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  27864154 aaaattaaatggaatgtaataacgaataaatcaaatgcgtaaacattaataagctataaataagtattgcattagtttcaccacataaaagtc 27864246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 1039114 - 1039022
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  1039114 aaaattaaatggaatgtaataacgaataaatcaaatgcataaacattaataagctataaataagtattgcattagtttcaccacataaaagtc 1039022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 25891987 - 25892079
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25891987 aaaattaaatggaatgtaataatgaataaatcaaatgcgtaaacattaataagctataaataagtattgcattagtttcaccacataaaagtc 25892079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 13564391 - 13564483
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| || ||||||||||||||||||    
T  13564391 aaaattaaatggaatgtaataacgaataaatcaaatgcgtaaacattaataagctataaataattattgcattattttcaccacataaaagtc 13564483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 11029758 - 11029850
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||| || ||||||||||||||||||    
T  11029758 aaaattaaatggaatgtaataacgaataaatgaaatgcgtaaacattaaaaagctataaataagtattgcattattttcaccacataaaagtc 11029850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 38856466 - 38856558
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||| || ||||||||||||||||||    
T  38856466 aaaattaaatggaatgtaataacgaataaatgaaatgcgtaaacattaaaaagctataaataagtattgcattattttcaccacataaaagtc 38856558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 7018249 - 7018338
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaa 98  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||| || |||||||||||||||    
T  7018249 aaaattaaatggaatgtaataacgaataaatcaaatgcgtaaacattaataagatataaaaaagtattgcattattttcaccacataaaa 7018338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 4197271 - 4197363
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||| | ||||||||||||||||||||||||||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  4197271 aaaattaaaagaaatgtaataacgaataaatcaaatgcgtaaacattaataacgaataaataagtattgcactagtttcaccacataaaagtc 4197363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 7797328 - 7797420
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||| |||||||||||||||||||||| |||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  7797328 aaaattaaatgaaatgtaataacgaataaatcaagtgcgtaaacattaataacgaataaataagtattgcactagtttcaccacataaaagtc 7797420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 28882739 - 28882831
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||||||||||||||||||||||| |||| |||| ||||||| ||||||||||||||||||||| || ||||||||||||||||||    
T  28882739 aaaattaaatggaatgtaataacgaataaatgaaatacgtaaacattaaaaagctataaataagtattgcattattttcaccacataaaagtc 28882831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 33994471 - 33994379
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||| |||||||||||||||||||||||||| || ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  33994471 aaaattaaatgaaatgtaataacgaataaatcaaatgcataaacattaataacgaataaataagtattgcactagtttcaccacataaaagtc 33994379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 37815333 - 37815425
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||||||||||||||||||||||| ||||||| | ||||||| ||||||||||||||||||||| || |||||| |||||||||||    
T  37815333 aaaattaaatggaatgtaataacgaataaatgaaatgcgcaaacattaaaaagctataaataagtattgcattattttcactacataaaagtc 37815425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 24050789 - 24050881
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaa-tgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagt 100  Q
    ||||||||||| ||||||||||||||||||||||| |||||| ||||||||||   |||||||||||||||| ||||||||||||||||||||    
T  24050789 aaaattaaatgaaatgtaataacgaataaatcaaaatgcgtaaacattaataacgaataaataagtattgcagtagtttcaccacataaaagt 24050881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 14280300 - 14280210
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 98  Q
    ||||||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  14280300 aaaattaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 14280210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 7797468 - 7797517
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7797468 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 7797517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 24053913 - 24054006
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaa-tgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||| |||||||||| |||||||||||| |||| | ||||||||||   |||||||||||||||| ||||||||||| |||||||||    
T  24053913 aaaattaaatgaaatgtaataaagaataaatcaaaatgcgcaaacattaataacgaataaataagtattgcagtagtttcaccaaataaaagtc 24054006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 27864296 - 27864343
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcg 180  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27864296 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcg 27864343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 1038966 - 1038917
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1038966 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacatcggt 1038917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 24054054 - 24054103
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24054054 tggccacaaaaaattggcgttacaatttcgactccaaaatatacgtcggt 24054103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 28882889 - 28882938
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  28882889 tggccacaaaaaattggcgttacaatttcgaccccaaaaaatacgtcggt 28882938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 133 - 176
Target Start/End: Original strand, 25892129 - 25892172
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatac 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  25892129 tggccacaaaaaattggcgttacaatttcgaccccaaaatatac 25892172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 4197413 - 4197457
Alignment:
Q  135 gccacaaaaaattggcgttacaatttcgaccccaaaatatacgtc 179  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  4197413 gccacaaaaaattggggttacaatttcgaccccaaaatatacgtc 4197457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 7018411 - 7018460
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||| |||||||||| ||| ||||||    
T  7018411 tggccacaaaaaattggcgttacaatttagaccccaaaaaatatgtcggt 7018460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 13564559 - 13564607
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  13564559 tggccacaaaaaattggcgttacaatttcga-cccaaaaaatacgtcggt 13564607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 43179045 - 43179004
Alignment:
Q  136 ccacaaaaaattggcgttacaatttcgaccccaaaatatacg 177  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  43179045 ccacaaaaaattggtgttacaatttcgaccccaaaatatacg 43179004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 11029909 - 11029952
Alignment:
Q  139 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||||||||||||||||||||| |||| |||||    
T  11029909 caaaaaattggcgttacaatttcgaccccaaaaaatacatcggt 11029952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 38856647 - 38856690
Alignment:
Q  139 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||||||||||||||||||||| |||| |||||    
T  38856647 caaaaaattggcgttacaatttcgaccccaaaaaatacatcggt 38856690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 182
Target Start/End: Original strand, 37815507 - 37815549
Alignment:
Q  140 aaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||||||| |||| |||||    
T  37815507 aaaaaattggcgttacaatttcgaccccaaaaaatacatcggt 37815549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 30353319 - 30353368
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||| ||||||| |||||||||||||||| ||||||  |||||||    
T  30353319 tggccacaacaaattggtgttacaatttcgacccaaaaatacgcgtcggt 30353368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 3e-38; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 23924709 - 23924801
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  23924709 aaaattaaatggaatgtaataacgaataaatcaaatgcgtaaacattaataagttataaataagtattgcattagtttcaccacataaaagtc 23924801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 31959369 - 31959277
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  31959369 aaaattaaatggaatgtaataatgaataaatcaaatgcgtaaacattaataagctataaataagtattgcattagtttcaccacataaaagtc 31959277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 2124945 - 2125037
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  2124945 aaaattaaatgaaatgtaataacgaataaatcaaatgcgtaaacattaataacaaataaataagtattgcactagtttcaccacataaaagtc 2125037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 35963051 - 35963142
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagc--tataaataagtattgcactagtttcaccacataaaa 98  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  35963051 aaaattaaatggaatgtaataaggaataaatcaaatgcgtaaacattaataagctatataaataagtattgcactagtttcaccacataaaa 35963142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 7171634 - 7171544
Alignment:
Q  11 aattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||| | || |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7171634 aattaaacgaaacgtaataacgaataaatcaaatgcgttaacattaataagctataaataagtattgcactagtttcaccacataaaagtc 7171544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 43376601 - 43376509
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||| |||||||||||||||||||||| |||||| ||||||||||   |||||||| ||||||| |||||||||||||||||||||    
T  43376601 aaaattaaatgaaatgtaataacgaataaatcaagtgcgtaaacattaataacgaataaataaatattgcattagtttcaccacataaaagtc 43376509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 22660894 - 22660803
Alignment:
Q  10 aaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    |||||||||| ||  ||||||||||||||||||||| ||| ||||||||||   ||||||||||||||||||||||| ||||||||||||||    
T  22660894 aaattaaatgaaacataataacgaataaatcaaatgtgtaaacattaataacgaataaataagtattgcactagtttaaccacataaaagtc 22660803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 43680152 - 43680236
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacat 94  Q
    ||||||||||| ||| ||||||||||||||||||||| ||| ||||||||||   |||||||||||||||||||||||||||||||    
T  43680152 aaaattaaatgaaat-taataacgaataaatcaaatgtgtaaacattaataacgaataaataagtattgcactagtttcaccacat 43680236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 40208 - 40267
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaa 68  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  40208 aaaattaaatggaatgtaataacgaataaatgaaatgcgtaaacattaataagctataaa 40267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 22587764 - 22587676
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||| || |||||||||||||||||||||||||| | |||||||    |  |||||||||||||||||||||||||||||||||||    
T  22587764 aaaattaaatgaaaagtaataacgaataaatcaaatgcgtaaaaattaata----acgaataagtattgcactagtttcaccacataaaagtc 22587676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 7343878 - 7343788
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 98  Q
    ||||||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  7343878 aaaattaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 7343788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 32376403 - 32376493
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 98  Q
    ||||||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  32376403 aaaattaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 32376493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 31959233 - 31959184
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31959233 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 31959184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 8420156 - 8420246
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 98  Q
    ||||||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| |||||| || || |||| ||||||||||    
T  8420156 aaaattaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattccattattttctccacataaaa 8420246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 30301886 - 30301976
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 98  Q
    ||||||||||||||||||||||||||||||| |||||| | | ||||||| || |||||||| ||||||||| || |||| ||||||||||    
T  30301886 aaaattaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaaactataaattagtattgcattattttctccacataaaa 30301976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 2125085 - 2125134
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2125085 tggccacaaaaaattggtgttacaatttcgaccccaaaatatacgtcggt 2125134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 22587628 - 22587579
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22587628 tggccacaaaaaattggcgttacaatttcgatcccaaaatatacgtcggt 22587579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 23924858 - 23924907
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23924858 tggccacaaaaaattagcgttacaatttcgaccccaaaatatacgtcggt 23924907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 35963197 - 35963246
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  35963197 tggccacaaaaaattggcgttacaatttcgaccccaaagtatacgtcggt 35963246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 43376461 - 43376412
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  43376461 tggccacagaaaattggcgttacaatttcgaccccaaaatatacgtcggt 43376412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 182
Target Start/End: Original strand, 43680295 - 43680340
Alignment:
Q  137 cacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  43680295 cacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 43680340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 22660757 - 22660708
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  22660757 tggccacaaaaaattagcgttacaatttcgactccaaaatatacgtcggt 22660708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 40352 - 40401
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||| ||||| ||||| |||||||||||||||    
T  40352 tggccacaaaaaattggcgttataattttgaccctaaaatatacgtcggt 40401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 182
Target Start/End: Complemental strand, 7171485 - 7171439
Alignment:
Q  136 ccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||| ||||||||| |||||||||||| ||||||||    
T  7171485 ccacaaaaaattggcattacaattttgaccccaaaatacacgtcggt 7171439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 182
Target Start/End: Complemental strand, 7343684 - 7343641
Alignment:
Q  139 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  7343684 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 7343641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 8420312 - 8420355
Alignment:
Q  139 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  8420312 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 8420355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 30302066 - 30302109
Alignment:
Q  139 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  30302066 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 30302109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 32376583 - 32376626
Alignment:
Q  139 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  32376583 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 32376626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 3e-38; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 2744206 - 2744298
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  2744206 aaaattaaatggaatgtaataacgaataaatcaaatgcgtaaacattaataagctataaataagtattgcattattttcaccacataaaagtc 2744298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 46990277 - 46990369
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46990277 aaaattaaatggaatgtaataacaaataaatcaaatacgtaaacattaataagctataaataagtattgcactagtttcaccacataaaagtc 46990369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 67634 - 67726
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||| ||||||    
T  67634 aaaattaaatggaatgtaataacgaataaatcaaatgcgtaaacattaataagctataaataattattgcactattttcaccacatgaaagtc 67726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 36813606 - 36813698
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  36813606 aaaattaaatggaatgtaataatgaataaatcaaatgcgtaaacattaataagttataaataagtattgcattagtttcaccacataaaagtc 36813698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 48247162 - 48247254
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||   |||||||||||||||||    
T  48247162 aaaattaaatggaatgtaataacgaataaatcaaatgcgtaaacattaataagctataaataagtattgcactgacttcaccacataaaagtc 48247254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 9427356 - 9427448
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    |||||||||| |||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||| || ||||||||||||||||||    
T  9427356 aaaattaaatagaatgtaataacgaataaatgaaatgcgtaaacattaaaaagctataaataagtattgcattattttcaccacataaaagtc 9427448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 16448376 - 16448284
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    |||||||||| |||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||| || ||||||||||||||||||    
T  16448376 aaaattaaatagaatgtaataacgaataaatgaaatgcgtaaacattaaaaagctataaataagtattgcattattttcaccacataaaagtc 16448284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 4001813 - 4001744
Alignment:
Q  10 aaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgca 79  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  4001813 aaattaaatggaatgtaataacgaataaatcaaatgcgtaaacattaataagctataaataagtattgca 4001744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 6502023 - 6502115
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||| |||||||||||||||||||||| |||||| ||||||||||   ||||||||||||||||||||||||||||| ||||||||    
T  6502023 aaaattaaatgaaatgtaataacgaataaatcaagtgcgtaaacattaataacaaataaataagtattgcactagtttcaccacttaaaagtc 6502115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 50957001 - 50956931
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgca 79  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  50957001 aaaattaaatggaatgtaataacgaataaatcaaatgcgtaaacattaataagttataaataagtattgca 50956931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 21952555 - 21952642
Alignment:
Q  10 aaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaa 97  Q
    |||| ||||| ||||||||||||||||||||| ||||||| ||||||||||   ||||||||||||||||||||||||||||||||||    
T  21952555 aaatgaaatgaaatgtaataacgaataaatcatatgcgtaaacattaataacgaataaataagtattgcactagtttcaccacataaa 21952642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 6744648 - 6744558
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 98  Q
    ||||||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||||||||||||| || |||| ||||||||||    
T  6744648 aaaattaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaataagtattgcattattttctccacataaaa 6744558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 3952536 - 3952446
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 98  Q
    ||||||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  3952536 aaaattaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 3952446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 8157260 - 8157350
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 98  Q
    ||||||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  8157260 aaaattaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 8157350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 13744017 - 13744107
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 98  Q
    ||||||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  13744017 aaaattaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 13744107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 14402327 - 14402237
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacac-attaataagctataaataagtattgcactagtttcaccacataaaa 98  Q
    ||||||||||||||||||||||||||||||| ||||||| | || ||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  14402327 aaaattaaatggaatgtaataacgaataaatgaaatgcggaaacaattaaaaagctataaattagtattgcattattttctccacataaaa 14402237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 30943942 - 30944032
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 98  Q
    ||||||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  30943942 aaaattaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 30944032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 67776 - 67825
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  67776 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 67825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 48247324 - 48247373
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48247324 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 48247373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 46990419 - 46990468
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  46990419 tggccacaaaaaattggcgttataatttcgaccccaaaatatacgtcggt 46990468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 2744361 - 2744407
Alignment:
Q  136 ccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  2744361 ccacaaaaaattggcgttacaatttcgaccccaaaaaatacgtcggt 2744407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 6502163 - 6502212
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||    
T  6502163 tggccacaaaaaattggcgctataatttcgaccccaaaatatacgtcggt 6502212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 36813973 - 36814017
Alignment:
Q  138 acaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  36813973 acaaaaaattgacgttacaatttcgaccccaaaatatacgtcggt 36814017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 182
Target Start/End: Original strand, 21952702 - 21952743
Alignment:
Q  141 aaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  21952702 aaaaatttgcgttacaatttcgaccccaaaatatacgtcggt 21952743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 9427508 - 9427551
Alignment:
Q  139 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||||||||||||||||||||| |||| |||||    
T  9427508 caaaaaattggcgttacaatttcgaccccaaaaaatacatcggt 9427551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 182
Target Start/End: Complemental strand, 16448224 - 16448181
Alignment:
Q  139 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||||||||||||||||||||| |||| |||||    
T  16448224 caaaaaattggcgttacaatttcgaccccaaaaaatacatcggt 16448181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 35443901 - 35443961
Alignment:
Q  38 atcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaa 98  Q
    |||||||||||| ||||||||||   ||||| ||||||||||||||||  |||||||||||    
T  35443901 atcaaatgcgtaaacattaataacgaataaaaaagtattgcactagttcaaccacataaaa 35443961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 182
Target Start/End: Complemental strand, 3952348 - 3952305
Alignment:
Q  139 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  3952348 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 3952305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 182
Target Start/End: Complemental strand, 6744492 - 6744449
Alignment:
Q  139 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  6744492 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 6744449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 8157438 - 8157481
Alignment:
Q  139 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  8157438 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 8157481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 13744177 - 13744220
Alignment:
Q  139 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  13744177 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 13744220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 182
Target Start/End: Complemental strand, 14402167 - 14402124
Alignment:
Q  139 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  14402167 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 14402124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 30944099 - 30944142
Alignment:
Q  139 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  30944099 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 30944142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 3e-38; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 3796101 - 3796193
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  3796101 aaaattaaatggaatgtaataacgaataaatcaaatgcgtaaacattaataagctataaataagtattgcattattttcaccacataaaagtc 3796193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 24753347 - 24753255
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    |||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  24753347 aaaattaaatggaatgtaataatgaataaatcaaatgcgtaaatattaataagctataaataagtattgcattagtttcaccacataaaagtc 24753255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 7266766 - 7266674
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||| || ||||||||||||||||||    
T  7266766 aaaattaaatggaatgtaataacgaataaatgaaatgcgtaaacattaaaaagctataaataagtattgcattattttcaccacataaaagtc 7266674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 81572 - 81480
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||  ||||||||||||||||||||||||||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  81572 aaaattaaatcaaatgtaataacgaataaatcaaatgcgtaaacattaataacgaataaataagtattgcactagtttcaccacataaaagtc 81480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 24602402 - 24602494
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||| |||||||||||||||||||||| |||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  24602402 aaaattaaatgaaatgtaataacgaataaatcaagtgcgtaaacattaataacgaataaataagtattgcactagtttcaccacataaaagtc 24602494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 24611712 - 24611620
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||| |||||||||||||||||||||| |||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  24611712 aaaattaaatgaaatgtaataacgaataaatcaagtgcgtaaacattaataacgaataaataagtattgcactagtttcaccacataaaagtc 24611620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 39797762 - 39797670
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||||||||||||||||||||||| |||| |||| ||||||| ||||||||||||||||||||| || ||||||||||||||||||    
T  39797762 aaaattaaatggaatgtaataacgaataaatgaaattcgtaaacattaaaaagctataaataagtattgcattattttcaccacataaaagtc 39797670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 41182161 - 41182253
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||   |||||||||||||||||||||| |||||||||||||||    
T  41182161 aaaattaaatgaaatgtaataacgaataaatcaaatgcgtaaacattaataacgaataaataagtattgcactagttgcaccacataaaagtc 41182253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 43944452 - 43944544
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||| |||||||||| |||||||||||||||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  43944452 aaaattaaatgaaatgtaataatgaataaatcaaatgcgtaaacattaataatgaataaataagtattgcactagtttcaccacataaaagtc 43944544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 439073 - 438981
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||| | ||||||||||||||||||||||||| ||| ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  439073 aaaattaaaagaaatgtaataacgaataaatcaaatgtgtaaacattaataacgaataaataagtattgcactagtttcaccacataaaagtc 438981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 1097334 - 1097426
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||| ||||||||||||||||||||||||| ||| ||||||||||   |||||||||||||||||||||||| |||||||||||||    
T  1097334 aaaattaaatgaaatgtaataacgaataaatcaaatgtgtaaacattaataacgaataaataagtattgcactagtttcgccacataaaagtc 1097426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 45479134 - 45479042
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||| ||||||||||  ||||||||||||||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  45479134 aaaattaaatgaaatgtaataaaaaataaatcaaatgcgtaaacattaataacgaataaataagtattgcactagtttcaccacataaaagtc 45479042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 38949508 - 38949419
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaa 98  Q
    |||||||||||||||||||||||| |||||| ||||||| | ||||||| ||||||||||||| ||||||| || |||||||||||||||    
T  38949508 aaaattaaatggaatgtaataacggataaatgaaatgcggaaacattaaaaagctataaataaatattgcattattttcaccacataaaa 38949419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 9659361 - 9659269
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    |||||||||||  |||||||||||||||||| || |||||| ||||||||||   |||||||||||||||||||||||||||| |||||||||    
T  9659361 aaaattaaatgagatgtaataacgaataaattaagtgcgtaaacattaataacgaataaataagtattgcactagtttcaccatataaaagtc 9659269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 28343273 - 28343365
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||| |||||||| | ||||||||||| |||||| ||||||||||   |||||||||||||| |||||||||||||||||||||||    
T  28343273 aaaattaaatgaaatgtaatgatgaataaatcaagtgcgtaaacattaataacgaataaataagtattggactagtttcaccacataaaagtc 28343365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 41005287 - 41005379
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    |||||| |||| |||||| || ||||||||||||||||||| ||||||||||   |||||||| |||||||||||||||||||||||||||||    
T  41005287 aaaattgaatgaaatgtattagcgaataaatcaaatgcgtaaacattaataacgaataaataactattgcactagtttcaccacataaaagtc 41005379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 5351053 - 5350963
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 98  Q
    ||||||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  5351053 aaaattaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 5350963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 10620725 - 10620815
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 98  Q
    ||||||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  10620725 aaaattaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 10620815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 41563812 - 41563722
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 98  Q
    ||||||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  41563812 aaaattaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 41563722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 438909 - 438860
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  438909 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 438860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 24753215 - 24753166
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24753215 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 24753166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 41005427 - 41005476
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41005427 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 41005476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 43944592 - 43944641
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43944592 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 43944641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 209737 - 209827
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 98  Q
    ||||||||||||||||||||||||||||||| |||||| | | | ||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  209737 aaaattaaatggaatgtaataacgaataaatgaaatgcggaaaatattaaaaagctataaattagtattgcattattttctccacataaaa 209827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 1097477 - 1097523
Alignment:
Q  136 ccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  1097477 ccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 1097523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 81432 - 81383
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  81432 tggccacaaaaaattagcgttacaatttcgaccccaaaatatacgtcggt 81383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 3796251 - 3796300
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3796251 tggccacaaaaaattggcgttacaatttcgaccccaaaaaatacgtcggt 3796300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 182
Target Start/End: Original strand, 28343453 - 28343495
Alignment:
Q  140 aaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  28343453 aaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 28343495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 9659177 - 9659128
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  9659177 tggccacaaaaaattgacgttacaatttcaaccccaaaatatacgtcggt 9659128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 12906280 - 12906328
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaa 57  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  12906280 aaaattaaatgaaatgtaataacgaataaatcaaatgcgtaaacattaa 12906328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 45478958 - 45478911
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcg 180  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||    
T  45478958 tggccaaaaaaaattggcattacaatttcgaccccaaaatatacgtcg 45478911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 182
Target Start/End: Original strand, 41182309 - 41182351
Alignment:
Q  140 aaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  41182309 aaaaaattggtgttacaatttcgaccccaaaatatacgtcggt 41182351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 24602542 - 24602587
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgt 178  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||    
T  24602542 tggccacaaaaaattggcattacaattttgaccccaaaatatacgt 24602587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 24611572 - 24611527
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgt 178  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||    
T  24611572 tggccacaaaaaattggcattacaattttgaccccaaaatatacgt 24611527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 182
Target Start/End: Complemental strand, 39797575 - 39797532
Alignment:
Q  139 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||||||||||||||||||||| |||| |||||    
T  39797575 caaaaaattggcgttacaatttcgaccccaaaaaatacatcggt 39797532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 209897 - 209940
Alignment:
Q  139 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  209897 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 209940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 182
Target Start/End: Complemental strand, 5350871 - 5350828
Alignment:
Q  139 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  5350871 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 5350828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 10620911 - 10620954
Alignment:
Q  139 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  10620911 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 10620954  T

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Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 182
Target Start/End: Complemental strand, 38949371 - 38949328
Alignment:
Q  139 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||| |||||||||||||||||||||||||| |||| |||||    
T  38949371 caaaaagttggcgttacaatttcgaccccaaaaaatacatcggt 38949328  T

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Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 182
Target Start/End: Complemental strand, 41563618 - 41563575
Alignment:
Q  139 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  41563618 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 41563575  T

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Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 43668894 - 43668957
Alignment:
Q  38 atcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    |||||||||||| ||||||||||   ||||| ||||||||  |||||| |||||||||||||||    
T  43668894 atcaaatgcgtaaacattaataatgaataaaaaagtattgtgctagttccaccacataaaagtc 43668957  T

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Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 176
Target Start/End: Complemental strand, 7266585 - 7266548
Alignment:
Q  139 caaaaaattggcgttacaatttcgaccccaaaatatac 176  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  7266585 caaaaaattggcattacaatttcgaccccaaaaaatac 7266548  T

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Target: scaffold0116 (Bit Score: 77; Significance: 7e-36; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 15277 - 15185
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  15277 aaaattaaatggaatgtaataacgaataaatcaaatgtgtaaacattaataagctataaataagtattgcattaatttcaccacataaaagtc 15185  T

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Target: scaffold0116; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 137 - 182
Target Start/End: Complemental strand, 15099 - 15054
Alignment:
Q  137 cacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  15099 cacaaaaaattggtgttacaatttcgaccccaaaatatacgtcggt 15054  T

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Target: scaffold0201 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 23165 - 23254
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaa 98  Q
    |||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23165 aaaattaaatggaatgtaataacgaatatatcaaatgcttaaacattaataagctataaataagtattgcattagtttcaccacataaaa 23254  T

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Target: scaffold0201; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 182
Target Start/End: Original strand, 23283 - 23321
Alignment:
Q  144 aattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  23283 aattggcgttacaatttcgaccccaaaatatatgtcggt 23321  T

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Target: scaffold0219 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 19256 - 19164
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||| |||||||||||||||||||||| |||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  19256 aaaattaaatgaaatgtaataacgaataaatcaagtgcgtaaacattaataacgaataaataagtattgcactagtttcaccacataaaagtc 19164  T

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Target: scaffold0057 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 22389 - 22481
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||||||| |||||||||| |||||||||||||||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  22389 aaaattaaatgaaatgtaataatgaataaatcaaatgcgtaaacattaataacgaataaataagtattgcactagtttcaccacataaaagtc 22481  T

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Target: scaffold0057; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 22529 - 22578
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  22529 tggccacaaaaaattggcgttacaattttgaccccaaagtatacgtcggt 22578  T

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Target: scaffold0794 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0794
Description:

Target: scaffold0794; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 1073 - 981
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 101  Q
    ||||||| ||| ||||||||||||||||||||||||||||| ||||||||||   |||||||||||| ||| |||||||||||||||||||||    
T  1073 aaaattatatgaaatgtaataacgaataaatcaaatgcgtaaacattaataacgaataaataagtatcgcattagtttcaccacataaaagtc 981  T

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Target: scaffold0794; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 933 - 885
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    ||||||||||||||||| || |||||||||| ||||||||||||||||||    
T  933 tggccacaaaaaattggtgtcacaatttcga-cccaaaatatacgtcggt 885  T

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Target: scaffold0494 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 4648 - 4558
Alignment:
Q  9 aaaattaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 98  Q
    ||||||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  4648 aaaattaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 4558  T

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Target: scaffold0494; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 182
Target Start/End: Complemental strand, 4486 - 4443
Alignment:
Q  139 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  4486 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 4443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 13826 - 13875
Alignment:
Q  133 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 182  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  13826 tggccacaaaaaattggcgttacaatttcgaccctaaaaaatacgtcggt 13875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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