View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1739_low_98 (Length: 237)
Name: NF1739_low_98
Description: NF1739
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1739_low_98 |
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Alignment Details
Target: chr5 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 6841921 - 6842141
Alignment:
| Q |
1 |
gaaattaccaaatgggaactatatattgagccaacttgtttgacttgaaattgtattcaatgaaagataacgataaacgattgattagtcttcaatgatt |
100 |
Q |
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| T |
6841921 |
gaaattaccaaatgggaactatatattgagccaacttgtttgacttgaaattttattcaatgaaagataacgataaacgattgattagtcttcaatgatt |
6842020 |
T |
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| Q |
101 |
ggctgaaacagatagctcagacctaccaaattcgttttcgatttcacatctttctatatttagcaaagaagtaccaaaagttgcatagaagaaaaccata |
200 |
Q |
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| T |
6842021 |
ggctgaaacagatagctcagacctaccaaactcgttttggatttcacatctttctatatttagcaaagaagtaccaaaagttgcatagaagaaaaccata |
6842120 |
T |
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| Q |
201 |
ataatgtctgaattgaaaatg |
221 |
Q |
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||||||||||||||||||||| |
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| T |
6842121 |
ataatgtctgaattgaaaatg |
6842141 |
T |
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