View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1740-Insertion-10 (Length: 480)
Name: NF1740-Insertion-10
Description: NF1740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1740-Insertion-10 |
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Alignment Details
Target: chr7 (Bit Score: 361; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 361; E-Value: 0
Query Start/End: Original strand, 15 - 476
Target Start/End: Complemental strand, 41509417 - 41508949
Alignment:
| Q |
15 |
tataggtctagaatcatgtgaataacacgtagcatgcttttaatgatgaccacaaattctcttctaagacgcaaacaaaaaagtgagaaggaagtgacgt |
114 |
Q |
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| T |
41509417 |
tataggtctagaatcatgtgaatcacacgtagcatgctttttatgatgaccacaaattctcttctaagacgcaaacaaaaaagtgagaaggaagtgacgt |
41509318 |
T |
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| Q |
115 |
gaagattcaattatagtatggcaggagagtcagaatggaaacgactcatgcccacttgtttacctgaataaattcttgcatgaccacttccaccacatgt |
214 |
Q |
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| T |
41509317 |
gaagattcaattatagtatggcaggagtcagaaaatggaaacgactcatgcccacttgtttacctgaataaattcttgcatgaccacatccaccacatgt |
41509218 |
T |
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| Q |
215 |
gtcttatgtacggtattaattaaaccgtgttaacttaacatattcaaagtcagtgtatttgtcttagatcttttaggtaatgttttagattagagttttt |
314 |
Q |
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| T |
41509217 |
gtcttatgtacggt----attaaaccgtgttaacttaacatattcaaaatcagtgtatttgtcttagatcttttaggtaatgttttagattagagttttt |
41509122 |
T |
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| Q |
315 |
gccaactgaaaaaatgggtttgcgagagaatattccacct----aaagaccgcggggtca-------tttttgatggaaatattagttattgataaaata |
403 |
Q |
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| T |
41509121 |
gccaactgaaaaagtgggtttgcgaaagaatattccacctaaagaaagaccgcggggtcaattaacttttttgatggaaatattagttattgataaaata |
41509022 |
T |
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| Q |
404 |
gtaacattgttaatgaacaaaatatggaattaggtaacatatctaaaacccctccatgttttagacttatact |
476 |
Q |
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| T |
41509021 |
gtaacattgttaatgaacaaaatatggagttaggtaacatatctaaaactcctccatgttttagacttatact |
41508949 |
T |
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