View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1740-Insertion-6 (Length: 116)
Name: NF1740-Insertion-6
Description: NF1740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1740-Insertion-6 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 88; Significance: 9e-43; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 88; E-Value: 9e-43
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 3342604 - 3342712
Alignment:
| Q |
8 |
gtttatatacaggcgattggtcaannnnnnnaaaagctggatttatttatcaagtgactcttgaatcttgatgtatagctaatattatactacatgtttt |
107 |
Q |
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| T |
3342604 |
gtttatatacaggcgattggtcaatttttttaaaagctggatttatttatcaagtgactcttgaatcttgatgtatagctaatattatactacatgtttt |
3342703 |
T |
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| Q |
108 |
ggaacatta |
116 |
Q |
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||||||||| |
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| T |
3342704 |
ggaacatta |
3342712 |
T |
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