View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1740-Insertion-8 (Length: 226)
Name: NF1740-Insertion-8
Description: NF1740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1740-Insertion-8 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 8 - 226
Target Start/End: Original strand, 30667280 - 30667500
Alignment:
| Q |
8 |
agattctctgaaatcttata-ccttgcttcaaggttctgtaatacgactagtggacgaataagttaaaa-gaaggccaaatcttcatggtagcgaattag |
105 |
Q |
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| T |
30667280 |
agattctctgaaatattatagccttgcttcaaggttctgtaatacgactagtggacgaataagttaaaaagaaggccaaatcttcatggtagcgaattag |
30667379 |
T |
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| Q |
106 |
ttgtaacaatacatgtgaggagatgtatgtagtgagtgcgcaggggatatatatcatggtctaaggtagggtaaagtggtcatggaattggtgtaatgtt |
205 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
30667380 |
ttgtaacaatacatgtgaggagatgtatgtagtgagtgcgcaggggatatatatcatggtctaaggtagggtaaagttgtcatggaattggtgtaatgtt |
30667479 |
T |
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| Q |
206 |
ctaatttctcttcccctctga |
226 |
Q |
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| T |
30667480 |
ctaatttctcttcccctctga |
30667500 |
T |
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