View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17404_low_10 (Length: 250)
Name: NF17404_low_10
Description: NF17404
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17404_low_10 |
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Alignment Details
Target: chr5 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 87 - 231
Target Start/End: Original strand, 6170176 - 6170320
Alignment:
| Q |
87 |
cgaacttatccatggtgaaaaacctatcaaactctctcatcatatactcagctcatctcatataatatggctaacagatcacatatcaatatcctttctt |
186 |
Q |
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| T |
6170176 |
cgaacttatctatggtgaaaaacctatcaaactctctcatcatatactcagctcatctcatataatatggctaacagatcacatatcaatatcctttctt |
6170275 |
T |
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| Q |
187 |
tttctcacaaagtgttgaataggtatcatatatcactatccatta |
231 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6170276 |
tttctcacaaagtgttgaataggtatcatatatcactatccatta |
6170320 |
T |
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