View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17405_low_3 (Length: 341)

Name: NF17405_low_3
Description: NF17405
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17405_low_3
NF17405_low_3
[»] chr3 (86 HSPs)
chr3 (1-341)||(53915746-53916081)
chr3 (1-341)||(1313083-1313416)
chr3 (73-341)||(746423-746691)
chr3 (1-341)||(51943043-51943378)
chr3 (73-341)||(10621859-10622126)
chr3 (1-341)||(457951-458291)
chr3 (1-341)||(455574-455914)
chr3 (1-337)||(53917914-53918245)
chr3 (73-341)||(25533108-25533374)
chr3 (1-341)||(4104145-4104482)
chr3 (13-341)||(27635889-27636211)
chr3 (73-340)||(42989954-42990222)
chr3 (71-341)||(42991954-42992224)
chr3 (73-341)||(41848805-41849082)
chr3 (268-341)||(6561614-6561687)
chr3 (259-332)||(53974124-53974197)
chr3 (259-332)||(11072644-11072717)
chr3 (1-74)||(6561741-6561817)
chr3 (176-332)||(11066255-11066429)
chr3 (187-310)||(54287487-54287627)
chr3 (1-52)||(1626933-1626984)
chr3 (1-52)||(28137545-28137596)
chr3 (1-74)||(32219026-32219102)
chr3 (1-48)||(28102252-28102299)
chr3 (1-52)||(43423713-43423764)
chr3 (1-52)||(47701845-47701896)
chr3 (192-258)||(53974011-53974078)
chr3 (1-51)||(4308531-4308581)
chr3 (1-51)||(11163107-11163157)
chr3 (1-51)||(11170361-11170411)
chr3 (1-74)||(45882870-45882946)
chr3 (1-46)||(35918199-35918244)
chr3 (1-74)||(38889970-38890047)
chr3 (1-52)||(3314640-3314691)
chr3 (1-44)||(3859492-3859535)
chr3 (1-44)||(5191617-5191660)
chr3 (1-44)||(5522865-5522908)
chr3 (1-52)||(5927014-5927065)
chr3 (1-44)||(6063696-6063739)
chr3 (1-52)||(24979663-24979714)
chr3 (1-48)||(28100291-28100338)
chr3 (1-52)||(28761678-28761729)
chr3 (1-44)||(30005805-30005848)
chr3 (1-44)||(42990268-42990311)
chr3 (1-44)||(43226050-43226093)
chr3 (1-52)||(43421665-43421716)
chr3 (1-44)||(47149145-47149188)
chr3 (1-52)||(51675005-51675056)
chr3 (1-74)||(15780791-15780867)
chr3 (1-51)||(35777378-35777428)
chr3 (1-51)||(51727256-51727306)
chr3 (192-257)||(11072736-11072801)
chr3 (1-38)||(25533412-25533449)
chr3 (1-46)||(32264289-32264334)
chr3 (1-52)||(880702-880753)
chr3 (8-51)||(1321398-1321441)
chr3 (1-36)||(6066046-6066081)
chr3 (1-52)||(6231405-6231456)
chr3 (1-44)||(18099420-18099463)
chr3 (1-44)||(26720512-26720555)
chr3 (1-44)||(27101431-27101474)
chr3 (1-44)||(38210334-38210377)
chr3 (1-44)||(42992250-42992293)
chr3 (1-44)||(43228255-43228298)
chr3 (1-44)||(50493963-50494006)
chr3 (1-52)||(53468705-53468756)
chr3 (1-52)||(53591151-53591202)
chr3 (1-52)||(54884113-54884164)
chr3 (1-43)||(10956277-10956319)
chr3 (1-43)||(10958573-10958615)
chr3 (1-38)||(746727-746764)
chr3 (3-52)||(36011783-36011832)
chr3 (4-52)||(890024-890072)
chr3 (1-52)||(3306755-3306806)
chr3 (1-52)||(4560515-4560566)
chr3 (1-44)||(9604857-9604899)
chr3 (1-44)||(10084639-10084682)
chr3 (1-52)||(12268216-12268267)
chr3 (1-44)||(18097150-18097193)
chr3 (1-44)||(22114555-22114598)
chr3 (1-44)||(29956650-29956693)
chr3 (1-38)||(10621780-10621817)
chr3 (1-30)||(18162641-18162670)
chr3 (20-52)||(6484341-6484373)
chr3 (1-37)||(10191559-10191595)
chr3 (1-52)||(28180980-28181029)
[»] chr1 (98 HSPs)
chr1 (73-341)||(31735846-31736114)
chr1 (73-341)||(47905957-47906224)
chr1 (73-341)||(24325348-24325616)
chr1 (141-341)||(15295238-15295438)
chr1 (73-341)||(9459744-9460012)
chr1 (1-341)||(28998507-28998843)
chr1 (1-341)||(29004223-29004559)
chr1 (73-341)||(9463571-9463839)
chr1 (1-341)||(39931763-39932100)
chr1 (1-341)||(27337192-27337531)
chr1 (144-341)||(48664853-48665050)
chr1 (73-341)||(27339455-27339729)
chr1 (73-341)||(17324957-17325226)
chr1 (1-337)||(2949485-2949810)
chr1 (1-310)||(21948441-21948751)
chr1 (152-341)||(45693834-45694023)
chr1 (150-341)||(4131690-4131881)
chr1 (157-341)||(6115532-6115717)
chr1 (154-337)||(6997219-6997395)
chr1 (144-304)||(6996067-6996221)
chr1 (227-341)||(46432521-46432635)
chr1 (73-230)||(46432049-46432207)
chr1 (189-341)||(16561132-16561284)
chr1 (73-220)||(2510649-2510801)
chr1 (176-262)||(11693580-11693666)
chr1 (144-208)||(26520516-26520580)
chr1 (141-203)||(6115479-6115541)
chr1 (176-332)||(13785662-13785835)
chr1 (261-332)||(32260746-32260817)
chr1 (176-257)||(14352761-14352842)
chr1 (1-52)||(17318869-17318920)
chr1 (1-52)||(18307085-18307136)
chr1 (1-52)||(25248768-25248819)
chr1 (1-52)||(31423128-31423179)
chr1 (1-74)||(28207320-28207396)
chr1 (1-110)||(6995954-6996058)
chr1 (1-122)||(48665082-48665204)
chr1 (176-305)||(10115509-10115653)
chr1 (1-52)||(31425273-31425324)
chr1 (1-51)||(6822992-6823042)
chr1 (1-74)||(13215032-13215108)
chr1 (1-51)||(17186382-17186432)
chr1 (1-51)||(20302436-20302486)
chr1 (1-74)||(41646871-41646947)
chr1 (1-52)||(11457729-11457780)
chr1 (265-332)||(11693686-11693753)
chr1 (1-52)||(18839563-18839614)
chr1 (1-52)||(25251529-25251580)
chr1 (1-44)||(28842479-28842522)
chr1 (1-52)||(31489891-31489942)
chr1 (1-52)||(50079075-50079126)
chr1 (1-44)||(51750023-51750066)
chr1 (1-74)||(15823497-15823573)
chr1 (1-43)||(16428638-16428680)
chr1 (1-74)||(38925732-38925808)
chr1 (12-53)||(6115344-6115385)
chr1 (1-38)||(9463498-9463535)
chr1 (213-257)||(32260838-32260882)
chr1 (1-52)||(6756503-6756554)
chr1 (1-36)||(6823877-6823912)
chr1 (1-44)||(12302759-12302802)
chr1 (1-44)||(15295088-15295131)
chr1 (1-44)||(25127856-25127899)
chr1 (1-36)||(46431961-46431996)
chr1 (1-44)||(47177346-47177389)
chr1 (1-44)||(47179697-47179740)
chr1 (1-51)||(2617493-2617543)
chr1 (2-44)||(13761821-13761863)
chr1 (1-74)||(14098224-14098300)
chr1 (1-74)||(47451599-47451675)
chr1 (1-38)||(9459671-9459708)
chr1 (222-275)||(13112046-13112099)
chr1 (1-46)||(20291439-20291484)
chr1 (1-38)||(31735775-31735812)
chr1 (1-38)||(47906260-47906297)
chr1 (1-37)||(16432396-16432432)
chr1 (16-52)||(49495468-49495504)
chr1 (1-44)||(4131633-4131676)
chr1 (13-52)||(8347535-8347574)
chr1 (1-44)||(10400082-10400125)
chr1 (13-52)||(14183852-14183891)
chr1 (4-51)||(16231578-16231625)
chr1 (264-295)||(16855265-16855296)
chr1 (1-52)||(17324041-17324092)
chr1 (1-52)||(50076926-50076977)
chr1 (1-52)||(50248826-50248877)
chr1 (1-52)||(50307801-50307852)
chr1 (1-44)||(51752349-51752392)
chr1 (13-51)||(8349314-8349352)
chr1 (1-51)||(16226144-16226194)
chr1 (4-38)||(27339387-27339421)
chr1 (73-111)||(42922156-42922194)
chr1 (1-38)||(2510578-2510615)
chr1 (73-122)||(15295169-15295218)
chr1 (1-38)||(24325654-24325690)
chr1 (1-52)||(9241340-9241391)
chr1 (1-37)||(17324890-17324926)
chr1 (1-37)||(28840671-28840707)
[»] chr7 (85 HSPs)
chr7 (73-341)||(1606172-1606440)
chr7 (73-341)||(18345238-18345507)
chr7 (73-341)||(11756926-11757194)
chr7 (73-341)||(1849666-1849935)
chr7 (73-341)||(20299156-20299424)
chr7 (1-341)||(3035416-3035758)
chr7 (73-341)||(28485262-28485532)
chr7 (1-341)||(31156163-31156499)
chr7 (73-341)||(38395987-38396256)
chr7 (1-341)||(37412380-37412715)
chr7 (1-341)||(42331251-42331592)
chr7 (73-341)||(7092498-7092767)
chr7 (73-341)||(21470614-21470882)
chr7 (1-341)||(7472232-7472573)
chr7 (1-341)||(21989854-21990187)
chr7 (1-341)||(38393684-38394023)
chr7 (73-341)||(28487250-28487519)
chr7 (142-341)||(47865329-47865528)
chr7 (73-341)||(7351977-7352245)
chr7 (141-341)||(7094814-7095014)
chr7 (1-337)||(20625739-20626075)
chr7 (1-337)||(20629630-20629966)
chr7 (1-337)||(20642049-20642385)
chr7 (73-341)||(7349598-7349866)
chr7 (141-341)||(7470420-7470620)
chr7 (141-334)||(24258166-24258358)
chr7 (1-273)||(13099728-13099996)
chr7 (194-341)||(443327-443474)
chr7 (141-341)||(3676998-3677179)
chr7 (73-262)||(43253843-43254035)
chr7 (74-238)||(20297163-20297327)
chr7 (176-339)||(40281824-40281989)
chr7 (176-332)||(10690684-10690845)
chr7 (1-52)||(11355244-11355295)
chr7 (1-52)||(20137361-20137412)
chr7 (1-52)||(21680013-21680064)
chr7 (1-74)||(27306481-27306557)
chr7 (279-332)||(20297108-20297161)
chr7 (1-74)||(26804534-26804606)
chr7 (5-52)||(21678052-21678099)
chr7 (1-52)||(22828885-22828936)
chr7 (1-52)||(24258449-24258500)
chr7 (1-52)||(39146239-39146290)
chr7 (1-51)||(44551-44601)
chr7 (1-51)||(1049547-1049597)
chr7 (259-325)||(12310542-12310608)
chr7 (1-110)||(443528-443632)
chr7 (1-122)||(7470274-7470394)
chr7 (1-52)||(4296187-4296238)
chr7 (1-52)||(18567599-18567650)
chr7 (1-52)||(31435299-31435350)
chr7 (1-44)||(38396310-38396353)
chr7 (1-52)||(44724565-44724616)
chr7 (1-44)||(48457647-48457690)
chr7 (176-262)||(12310442-12310528)
chr7 (1-74)||(22251794-22251870)
chr7 (1-38)||(7351904-7351941)
chr7 (1-38)||(40946328-40946365)
chr7 (4-44)||(1849975-1850015)
chr7 (12-52)||(24465535-24465575)
chr7 (1-44)||(3878571-3878614)
chr7 (1-44)||(7092427-7092470)
chr7 (13-52)||(7188529-7188568)
chr7 (1-52)||(21592395-21592446)
chr7 (1-44)||(40836994-40837037)
chr7 (1-51)||(35616-35666)
chr7 (288-334)||(43254023-43254069)
chr7 (1-38)||(7094674-7094711)
chr7 (1-38)||(7349525-7349562)
chr7 (1-38)||(18345541-18345578)
chr7 (1-38)||(28487553-28487590)
chr7 (1-44)||(1047176-1047219)
chr7 (264-295)||(6628853-6628884)
chr7 (1-44)||(9680813-9680856)
chr7 (264-295)||(12657667-12657698)
chr7 (16-74)||(22392434-22392495)
chr7 (265-295)||(12485044-12485074)
chr7 (265-295)||(12506475-12506505)
chr7 (4-38)||(20297362-20297396)
chr7 (4-38)||(24748594-24748628)
chr7 (1-35)||(28485569-28485603)
chr7 (141-170)||(443461-443490)
chr7 (73-122)||(3677201-3677250)
chr7 (73-122)||(7094745-7094794)
chr7 (1-52)||(42223142-42223194)
[»] chr6 (51 HSPs)
chr6 (73-341)||(2629209-2629478)
chr6 (1-341)||(12195767-12196103)
chr6 (73-341)||(18317752-18318021)
chr6 (73-341)||(30034926-30035195)
chr6 (1-341)||(30966924-30967263)
chr6 (141-341)||(5275727-5275927)
chr6 (141-341)||(19704964-19705164)
chr6 (73-341)||(26932889-26933157)
chr6 (1-334)||(17852275-17852604)
chr6 (145-340)||(17011781-17011973)
chr6 (141-341)||(22858343-22858535)
chr6 (176-340)||(20526548-20526708)
chr6 (176-320)||(30445243-30445404)
chr6 (259-332)||(30443022-30443097)
chr6 (1-52)||(24338700-24338751)
chr6 (1-52)||(25477285-25477336)
chr6 (1-52)||(32447568-32447619)
chr6 (1-74)||(15532933-15533009)
chr6 (1-74)||(15541392-15541468)
chr6 (1-52)||(3390390-3390441)
chr6 (1-52)||(13057205-13057256)
chr6 (1-44)||(19704821-19704864)
chr6 (1-52)||(3632190-3632241)
chr6 (1-44)||(4816483-4816526)
chr6 (1-44)||(20915608-20915651)
chr6 (1-44)||(28241573-28241616)
chr6 (1-51)||(14459017-14459067)
chr6 (1-51)||(14507427-14507477)
chr6 (12-52)||(15719665-15719705)
chr6 (1-52)||(22490650-22490702)
chr6 (1-52)||(1072129-1072180)
chr6 (1-52)||(3233983-3234034)
chr6 (1-52)||(3630116-3630167)
chr6 (1-44)||(8995498-8995541)
chr6 (1-44)||(9019945-9019988)
chr6 (1-52)||(13039765-13039816)
chr6 (1-44)||(26065005-26065048)
chr6 (1-44)||(26084974-26085017)
chr6 (1-52)||(30729080-30729131)
chr6 (1-51)||(1230501-1230551)
chr6 (1-35)||(2629137-2629171)
chr6 (1-51)||(13870674-13870723)
chr6 (1-51)||(19227660-19227710)
chr6 (176-257)||(30443116-30443195)
chr6 (1-44)||(11983281-11983324)
chr6 (285-328)||(12158532-12158575)
chr6 (1-52)||(12161807-12161857)
chr6 (13-52)||(15346402-15346441)
chr6 (1-44)||(30034855-30034898)
chr6 (1-35)||(32280024-32280058)
chr6 (264-308)||(3833176-3833220)
[»] scaffold0154 (1 HSPs)
scaffold0154 (1-341)||(11725-12060)
[»] chr5 (72 HSPs)
chr5 (73-341)||(18468699-18468967)
chr5 (1-340)||(18511464-18511800)
chr5 (73-341)||(25803708-25803976)
chr5 (73-341)||(27910136-27910405)
chr5 (73-341)||(27912220-27912490)
chr5 (73-341)||(3373360-3373629)
chr5 (1-341)||(26097422-26097760)
chr5 (73-341)||(15551926-15552195)
chr5 (4-341)||(26098506-26098840)
chr5 (73-322)||(10586549-10586799)
chr5 (141-339)||(18509706-18509904)
chr5 (19-341)||(18596327-18596656)
chr5 (159-341)||(21288530-21288713)
chr5 (1-262)||(18466453-18466711)
chr5 (190-335)||(17415748-17415893)
chr5 (238-341)||(6661929-6662032)
chr5 (144-262)||(15143262-15143373)
chr5 (263-341)||(40221283-40221361)
chr5 (259-332)||(5779144-5779217)
chr5 (141-209)||(40221340-40221408)
chr5 (288-341)||(18466412-18466465)
chr5 (1-52)||(17072859-17072910)
chr5 (1-52)||(25904079-25904130)
chr5 (1-52)||(31472865-31472916)
chr5 (1-52)||(40221498-40221549)
chr5 (1-74)||(2818588-2818664)
chr5 (1-51)||(20043027-20043077)
chr5 (1-51)||(31542712-31542762)
chr5 (288-337)||(15143225-15143274)
chr5 (4-52)||(20507717-20507765)
chr5 (1-72)||(34530918-34530992)
chr5 (1-52)||(695865-695916)
chr5 (1-44)||(2174903-2174946)
chr5 (1-44)||(4410045-4410088)
chr5 (1-52)||(10474575-10474626)
chr5 (1-44)||(34477306-34477349)
chr5 (1-44)||(34479671-34479714)
chr5 (1-52)||(39398245-39398295)
chr5 (1-51)||(16776135-16776185)
chr5 (1-51)||(25921725-25921775)
chr5 (1-51)||(31179623-31179673)
chr5 (1-51)||(31545057-31545107)
chr5 (1-38)||(18469001-18469038)
chr5 (4-79)||(21288710-21288788)
chr5 (1-44)||(1189861-1189904)
chr5 (1-44)||(6747290-6747333)
chr5 (1-52)||(6756470-6756521)
chr5 (1-44)||(16092452-16092495)
chr5 (1-44)||(21684703-21684746)
chr5 (1-52)||(24126832-24126883)
chr5 (1-52)||(37706032-37706083)
chr5 (1-36)||(38882098-38882133)
chr5 (1-51)||(10529351-10529401)
chr5 (1-74)||(12556175-12556251)
chr5 (1-51)||(20044987-20045037)
chr5 (1-35)||(39854476-39854510)
chr5 (1-38)||(27912526-27912563)
chr5 (73-110)||(41586025-41586062)
chr5 (1-37)||(4236620-4236656)
chr5 (12-74)||(36208531-36208597)
chr5 (1-52)||(17818742-17818792)
chr5 (1-44)||(25804009-25804052)
chr5 (13-52)||(36402592-36402631)
chr5 (13-52)||(41585970-41586009)
chr5 (261-295)||(2532750-2532784)
chr5 (13-74)||(6661446-6661510)
chr5 (176-230)||(6661594-6661648)
chr5 (1-35)||(10586835-10586869)
chr5 (1-35)||(21948019-21948053)
chr5 (1-38)||(15552235-15552272)
chr5 (1-37)||(6745060-6745096)
chr5 (189-237)||(32520268-32520316)
[»] chr4 (86 HSPs)
chr4 (73-341)||(22132718-22132986)
chr4 (1-341)||(5100744-5101078)
chr4 (1-341)||(14787683-14788020)
chr4 (73-341)||(22134949-22135218)
chr4 (73-341)||(17662557-17662825)
chr4 (1-341)||(24347960-24348299)
chr4 (1-341)||(44600090-44600427)
chr4 (1-341)||(56030190-56030525)
chr4 (141-326)||(30136331-30136516)
chr4 (192-341)||(47211158-47211307)
chr4 (142-341)||(9022061-9022252)
chr4 (141-341)||(38890517-38890700)
chr4 (141-341)||(10112627-10112815)
chr4 (188-341)||(9863500-9863650)
chr4 (141-231)||(19322551-19322641)
chr4 (73-214)||(53404998-53405141)
chr4 (176-332)||(38209098-38209259)
chr4 (241-340)||(19322410-19322510)
chr4 (271-341)||(14789500-14789570)
chr4 (176-262)||(54929094-54929180)
chr4 (1-74)||(47274732-47274808)
chr4 (183-262)||(10979676-10979755)
chr4 (1-52)||(37313318-37313369)
chr4 (73-122)||(18709490-18709539)
chr4 (3-52)||(24446833-24446882)
chr4 (73-122)||(47211065-47211114)
chr4 (1-52)||(2891347-2891398)
chr4 (1-52)||(33415739-33415790)
chr4 (1-52)||(36378322-36378373)
chr4 (1-52)||(38928430-38928481)
chr4 (1-51)||(5198451-5198501)
chr4 (264-326)||(5516771-5516833)
chr4 (1-74)||(22802986-22803062)
chr4 (1-74)||(40091667-40091743)
chr4 (1-74)||(48486324-48486400)
chr4 (259-328)||(29609914-29609983)
chr4 (4-52)||(3937464-3937512)
chr4 (261-332)||(54929198-54929267)
chr4 (1-44)||(7941359-7941402)
chr4 (1-44)||(8631671-8631714)
chr4 (1-44)||(11006489-11006532)
chr4 (1-44)||(11008818-11008861)
chr4 (1-44)||(11434993-11435036)
chr4 (1-52)||(12396097-12396148)
chr4 (1-52)||(12401059-12401110)
chr4 (1-52)||(19095912-19095963)
chr4 (1-44)||(22044642-22044685)
chr4 (1-44)||(22046937-22046980)
chr4 (1-44)||(24888834-24888877)
chr4 (1-44)||(31849851-31849894)
chr4 (1-52)||(38270238-38270289)
chr4 (1-44)||(40637112-40637155)
chr4 (1-44)||(51015284-51015327)
chr4 (1-74)||(619699-619775)
chr4 (1-51)||(6764870-6764920)
chr4 (1-51)||(18847184-18847234)
chr4 (1-74)||(22801114-22801190)
chr4 (1-74)||(52942698-52942775)
chr4 (1-38)||(17662486-17662523)
chr4 (1-38)||(18709415-18709452)
chr4 (1-38)||(47210992-47211029)
chr4 (1-37)||(36919837-36919873)
chr4 (1-44)||(5637717-5637760)
chr4 (1-44)||(9148291-9148334)
chr4 (1-44)||(9174398-9174441)
chr4 (1-44)||(9176726-9176769)
chr4 (1-44)||(16453347-16453390)
chr4 (1-44)||(37089623-37089666)
chr4 (1-51)||(16932041-16932091)
chr4 (1-51)||(16934395-16934445)
chr4 (1-35)||(22132642-22132676)
chr4 (1-35)||(22134867-22134901)
chr4 (1-74)||(24878994-24879070)
chr4 (1-35)||(53405177-53405211)
chr4 (200-257)||(29609838-29609895)
chr4 (1-37)||(2485124-2485160)
chr4 (1-33)||(18409599-18409631)
chr4 (13-52)||(15032800-15032839)
chr4 (13-52)||(19322727-19322766)
chr4 (1-44)||(22780625-22780668)
chr4 (1-44)||(22782990-22783033)
chr4 (1-44)||(38409243-38409286)
chr4 (1-52)||(41997522-41997573)
chr4 (1-44)||(47868439-47868482)
chr4 (1-74)||(14633325-14633400)
chr4 (1-74)||(24880456-24880532)
[»] scaffold0005 (3 HSPs)
scaffold0005 (1-341)||(51710-52047)
scaffold0005 (271-341)||(50160-50230)
scaffold0005 (1-74)||(183892-183967)
[»] chr2 (54 HSPs)
chr2 (1-341)||(42452450-42452786)
chr2 (1-341)||(42923761-42924093)
chr2 (73-341)||(35215915-35216183)
chr2 (73-341)||(35218296-35218564)
chr2 (73-341)||(23452560-23452828)
chr2 (141-341)||(27583713-27583906)
chr2 (141-332)||(28568556-28568740)
chr2 (213-341)||(27136368-27136504)
chr2 (247-335)||(34575608-34575696)
chr2 (176-332)||(15693583-15693755)
chr2 (267-332)||(28568346-28568411)
chr2 (259-332)||(41303549-41303623)
chr2 (1-52)||(19007592-19007643)
chr2 (191-262)||(39286971-39287042)
chr2 (1-74)||(6264397-6264473)
chr2 (1-74)||(40032310-40032386)
chr2 (1-52)||(31733017-31733068)
chr2 (1-74)||(22287588-22287664)
chr2 (1-51)||(24162464-24162514)
chr2 (141-208)||(34575528-34575588)
chr2 (1-52)||(11739812-11739863)
chr2 (1-44)||(13910296-13910339)
chr2 (1-52)||(17849069-17849120)
chr2 (1-44)||(19504597-19504640)
chr2 (1-52)||(22163199-22163250)
chr2 (1-52)||(28196589-28196640)
chr2 (1-44)||(38020162-38020205)
chr2 (176-257)||(7502642-7502723)
chr2 (1-51)||(27104752-27104802)
chr2 (1-38)||(23452489-23452526)
chr2 (264-305)||(39286911-39286952)
chr2 (184-257)||(41303457-41303530)
chr2 (4-52)||(34979834-34979882)
chr2 (12-52)||(37963190-37963230)
chr2 (183-255)||(41304806-41304877)
chr2 (1-52)||(3022115-3022166)
chr2 (1-44)||(5377681-5377724)
chr2 (4-74)||(6259070-6259143)
chr2 (278-329)||(7502582-7502633)
chr2 (1-44)||(21520945-21520988)
chr2 (1-52)||(38020095-38020146)
chr2 (1-44)||(42064475-42064518)
chr2 (1-74)||(22407661-22407737)
chr2 (259-332)||(41304898-41304964)
chr2 (1-38)||(35215838-35215875)
chr2 (1-38)||(35218215-35218252)
chr2 (1-37)||(19502263-19502299)
chr2 (1-52)||(14837225-14837276)
chr2 (1-52)||(15539727-15539778)
chr2 (1-48)||(17848399-17848446)
chr2 (12-51)||(22874095-22874134)
chr2 (1-44)||(43623820-43623863)
chr2 (12-51)||(45280248-45280287)
chr2 (13-52)||(12342673-12342713)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-341)||(78884-79221)
[»] chr8 (56 HSPs)
chr8 (73-337)||(15808967-15809231)
chr8 (73-341)||(28283544-28283812)
chr8 (73-341)||(43529872-43530140)
chr8 (73-341)||(3873751-3874022)
chr8 (1-341)||(41382420-41382756)
chr8 (1-341)||(41384494-41384827)
chr8 (141-341)||(608471-608671)
chr8 (184-341)||(32339095-32339252)
chr8 (233-341)||(3265643-3265751)
chr8 (4-191)||(181434-181617)
chr8 (1-74)||(15072717-15072793)
chr8 (188-332)||(13986214-13986374)
chr8 (1-122)||(32339272-32339392)
chr8 (1-52)||(5622990-5623041)
chr8 (1-52)||(27107149-27107200)
chr8 (1-52)||(37214462-37214513)
chr8 (1-51)||(26775234-26775284)
chr8 (3-52)||(35872632-35872681)
chr8 (4-52)||(14419446-14419494)
chr8 (1-52)||(1225198-1225249)
chr8 (1-52)||(13858736-13858787)
chr8 (4-51)||(25952554-25952601)
chr8 (261-332)||(30679186-30679256)
chr8 (1-52)||(33541640-33541691)
chr8 (1-52)||(36865570-36865621)
chr8 (1-51)||(3886170-3886220)
chr8 (1-51)||(14477309-14477359)
chr8 (1-51)||(14807784-14807834)
chr8 (1-51)||(44720876-44720926)
chr8 (73-122)||(24873506-24873555)
chr8 (1-53)||(15068012-15068064)
chr8 (176-262)||(11701364-11701447)
chr8 (1-44)||(12517276-12517319)
chr8 (1-44)||(18810748-18810791)
chr8 (1-44)||(27827026-27827069)
chr8 (1-44)||(27829337-27829380)
chr8 (1-52)||(27911047-27911097)
chr8 (1-52)||(27957466-27957516)
chr8 (1-52)||(30480755-30480806)
chr8 (1-51)||(4424051-4424101)
chr8 (1-38)||(24873433-24873470)
chr8 (1-37)||(15809266-15809302)
chr8 (1-44)||(608774-608817)
chr8 (1-52)||(5372430-5372480)
chr8 (1-44)||(18812933-18812976)
chr8 (1-44)||(43082013-43082056)
chr8 (1-74)||(28251819-28251895)
chr8 (1-38)||(28283471-28283508)
chr8 (288-332)||(11701435-11701479)
chr8 (12-52)||(21480546-21480586)
chr8 (1-36)||(3874058-3874093)
chr8 (1-44)||(22684908-22684951)
chr8 (1-36)||(43079650-43079685)
chr8 (3-38)||(43530174-43530209)
chr8 (12-52)||(3005889-3005930)
chr8 (261-290)||(27820149-27820178)
[»] scaffold0511 (2 HSPs)
scaffold0511 (73-341)||(1736-2005)
scaffold0511 (1-37)||(2042-2078)
[»] scaffold0133 (1 HSPs)
scaffold0133 (194-341)||(4547-4694)
[»] scaffold0468 (2 HSPs)
scaffold0468 (227-341)||(2070-2184)
scaffold0468 (141-199)||(2022-2080)
[»] scaffold1674 (1 HSPs)
scaffold1674 (248-341)||(1-94)
[»] scaffold0339 (1 HSPs)
scaffold0339 (1-74)||(3957-4033)
[»] scaffold0008 (2 HSPs)
scaffold0008 (189-257)||(57836-57903)
scaffold0008 (261-332)||(57926-57995)
[»] scaffold0250 (1 HSPs)
scaffold0250 (1-51)||(2866-2916)
[»] scaffold0004 (1 HSPs)
scaffold0004 (4-52)||(79844-79892)
[»] scaffold0038 (1 HSPs)
scaffold0038 (1-44)||(41735-41778)
[»] scaffold0025 (2 HSPs)
scaffold0025 (1-44)||(69543-69586)
scaffold0025 (1-44)||(73275-73318)
[»] scaffold0552 (1 HSPs)
scaffold0552 (1-51)||(1083-1133)
[»] scaffold0472 (1 HSPs)
scaffold0472 (4-51)||(6185-6232)
[»] scaffold0267 (1 HSPs)
scaffold0267 (1-44)||(34-77)
[»] scaffold0068 (1 HSPs)
scaffold0068 (1-44)||(29164-29207)
[»] scaffold0131 (1 HSPs)
scaffold0131 (1-51)||(15005-15055)
[»] scaffold0533 (1 HSPs)
scaffold0533 (264-305)||(2232-2273)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-32)||(35644-35675)
[»] scaffold0474 (1 HSPs)
scaffold0474 (282-332)||(10443-10493)
[»] scaffold0224 (1 HSPs)
scaffold0224 (73-111)||(16137-16175)


Alignment Details
Target: chr3 (Bit Score: 203; Significance: 1e-111; HSPs: 86)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 341
Target Start/End: Original strand, 53915746 - 53916081
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactc 97  Q
    ||||||||| | | |||||||||||||||||||||||| |||| |||||||| |   ||||||||||||||||||||        |||||||||||||||    
T  53915746 ttgttgttgtcatcctaaacccttgtttcagccccctctatcttaaggtttactctgattcaaggtctatatttata--------gtaaaagtataactc 53915837  T
Q  98 ataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatata 196  Q
    |||||||||||||  |||||||||| || |||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53915838 ataaatttggaacgaataccacactcaa-gatacgtttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatata 53915936  T
Q  197 tttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatattttt 296  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  53915937 tttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttt 53916036  T
Q  297 agcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||||||||| | ||| ||||||||||||||||||||||||    
T  53916037 agcaacaatattctccatccctcaaattttgagtcatactacaac 53916081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 341
Target Start/End: Complemental strand, 1313416 - 1313083
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactc 97  Q
    ||||||||||| || |||||| |||||||||||||||| ||||||||||||| |   ||||||||||||||||||||        |||||||||||||||    
T  1313416 ttgttgttgccattgtaaacc-ttgtttcagccccctctatctcaaggtttactctgattcaaggtctatatttata--------gtaaaagtataactc 1313326  T
Q  98 ataaatttggaacagataccacactaaaagatacnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatat 197  Q
    |||||||||||||  ||| ||||||||| |||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1313325 ataaatttggaacgaatatcacactaaa-gatactttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatat 1313227  T
Q  198 ttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatattttta 297  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||    
T  1313226 ttgcatcaaatcgttcttcatacggtacagaaatatatttattgtccataaatatattttcaacacaaaatatatttgaaacaaatcatttatattttta 1313127  T
Q  298 gcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||| | ||||||||||||||||||||||||||||    
T  1313126 gcaacaatattctccatccatcaaattttgagtcatactacaac 1313083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 73 - 341
Target Start/End: Complemental strand, 746691 - 746423
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 171  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||          |||||||||||||||||||||||||||||||    
T  746691 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gatacgtttttttttctccttcagtgaaagaatatttgcatcaaaa 746593  T
Q  172 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatata 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  746592 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatata 746493  T
Q  272 tttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  746492 tttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaac 746423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 341
Target Start/End: Complemental strand, 51943378 - 51943043
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactc 97  Q
    ||||||||||||||||||||| |||||||||| ||||| ||||| ||||||| |   ||||||||||||||||||||        |||||||||||| ||    
T  51943378 ttgttgttgcctttctaaacctttgtttcagcaccctctatctccaggtttactctgattcaaggtctatatttata--------gtaaaagtataaatc 51943287  T
Q  98 ataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatata 196  Q
    |||||||||||||  |||||||||| || |||||          |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  51943286 ataaatttggaacgaataccacactgaa-gatacgtttttctttctccttcaatgaaagaatatttacatcaaaaatataatattccctttcaaaatata 51943188  T
Q  197 tttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatattttt 296  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  51943187 tttgcatcaaatcattcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttt 51943088  T
Q  297 agcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  51943087 agcaacaatattcttcatccatcaaattttgagtcatactacaac 51943043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 73 - 341
Target Start/End: Original strand, 10621859 - 10622126
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaa 172  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||         ||||||||||||||||||||||||||||||||    
T  10621859 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gatacgttttttttctccttcagtgaaagaatatttgcatcaaaaa 10621957  T
Q  173 tataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatat 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| || ||||||| ||||||    
T  10621958 tataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatcttcagcacaatatatat 10622057  T
Q  273 ttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  10622058 ttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaac 10622126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 1 - 341
Target Start/End: Complemental strand, 458291 - 457951
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc----aaggtttagt---attcaaggtctatatttatatatttatagtaaaagtata 93  Q
    |||||||||||||||||||||||||||||||||||||| |||||    |||||||||    || |||||||||||||||||        |||||||||||    
T  458291 ttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaggtttagcctgatacaaggtctatatttata--------gtaaaagtata 458200  T
Q  94 actcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaa 191  Q
    |||||||||||||||||| |||||||||| || |||||           |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  458199 actcataaatttggaacaaataccacactgaa-gatacgttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaa 458101  T
Q  192 atatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttata 291  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  458100 atatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccacaaatatattttcagcacaaaatatatttgaaacaaatcttttata 458001  T
Q  292 tttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||||||  | ||||||||||||||||||||||||||||    
T  458000 tttttagcaacaatattccccatccatcaaattttgagtcatactacaac 457951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 341
Target Start/End: Complemental strand, 455914 - 455574
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc----aaggtttagt---attcaaggtctatatttatatatttatagtaaaagtata 93  Q
    |||||||||||||||||||||||||||||||||||||| |||||    |||||||||    || |||||||||||||||||        |||||||||||    
T  455914 ttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaggtttagcctgatacaaggtctatatttata--------gtaaaagtata 455823  T
Q  94 actcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaa 191  Q
    |||||||||||||||||| ||||| |||| || |||||           |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  455822 actcataaatttggaacaaataccgcactgaa-gatacgttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaa 455724  T
Q  192 atatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttata 291  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  455723 atatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccacaaatatattttcagcacaaaatatatttgaaacaaatcttttata 455624  T
Q  292 tttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||||||  | ||||||||||||||||||||||||||||    
T  455623 tttttagcaacaatattccccatccatcaaattttgagtcatactacaac 455574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 1 - 337
Target Start/End: Original strand, 53917914 - 53918245
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactc 97  Q
    ||||||||| | ||||||||| |||||||||||||||||||||||||||||| |   ||||||||||||||||||||        |||||||||||||||    
T  53917914 ttgttgttgtcattctaaaccattgtttcagccccctccatctcaaggtttaatctgattcaaggtctatatttata--------gtaaaagtataactc 53918005  T
Q  98 ataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatata 196  Q
    ||||||||| |||  |||||||||| || |||||          |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  53918006 ataaatttgaaacgaataccacactgaa-gatacgtttttttttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatata 53918104  T
Q  197 tttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatattttt 296  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||    
T  53918105 tttgcatcaaatcgttcttcatacggtaaaaaaatatatttattgtccataaatatatgttcaacacaaaatatatttgaaacaaatcttttatattttt 53918204  T
Q  297 agcaacaatattcttcttccatcaaattttgagtcatacta 337  Q
    |||||||||||||| | ||||||||||||||||||||||||    
T  53918205 agcaacaatattctccatccatcaaattttgagtcatacta 53918245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 73 - 341
Target Start/End: Complemental strand, 25533374 - 25533108
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaa 172  Q
    ||||||||||||||||||||||||||||||||| ||||| ||| |||||| || |||||         ||||||||||||||||||||||||||||||||    
T  25533374 tatatttatagtaaaagtataactcataaatttagaacaaatatcacactgaa-gatacgttttttt-ctccttcagtgaaagaatatttgcatcaaaaa 25533277  T
Q  173 tataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatat 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||| |||||||||    
T  25533276 tataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcaaaaaatatat 25533177  T
Q  273 ttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  25533176 ttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaac 25533108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 341
Target Start/End: Original strand, 4104145 - 4104482
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc----aaggtttagt---attcaaggtctatatttatatatttatagtaaaagtata 93  Q
    |||||||||||||||||||||||||||||||||||||| |||||    || ||||||    || |||||||||||||||||        |||||||||||    
T  4104145 ttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttata--------gtaaaagtata 4104236  T
Q  94 actcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaa 191  Q
    |||||||||||||||||| ||||||||||    |||||           |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4104237 actcataaatttggaacaaataccacact----gatacgttttttttttctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaa 4104332  T
Q  192 atatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttata 291  Q
    |||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||    
T  4104333 atatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcataaagtatatttgaaacaaatcttttata 4104432  T
Q  292 tttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4104433 tttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 4104482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 13 - 341
Target Start/End: Original strand, 27635889 - 27636211
Alignment:
Q  13 ttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactcataaatttggaa 109  Q
    |||||||||||||||||||||||||| ||||||||||||| |   ||||||||||||||||| ||      ||  |||| ||||||||||||||||||||    
T  27635889 ttctaaacccttgtttcagccccctctatctcaaggtttactctaattcaaggtctatatttgtag-----ta--aaaaatataactcataaatttggaa 27635981  T
Q  110 cagataccacactaaaagatacnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatc 209  Q
    |  |||||||||| || |||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27635982 cgaataccacactgaa-gatacattttttt-ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatc 27636079  T
Q  210 gttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattc 309  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  27636080 gttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaactaatattttatatttttagcaacaatattc 27636179  T
Q  310 ttcttccatcaaattttgagtcatactacaac 341  Q
    | | ||||||||||||| | ||||||||||||    
T  27636180 tccatccatcaaattttaaatcatactacaac 27636211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 73 - 340
Target Start/End: Complemental strand, 42990222 - 42989954
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 170  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||           ||||||||||||||||||||||||||||||    
T  42990222 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gatacattttttttttctccttcagtgaaagaatatttgcatcaaa 42990124  T
Q  171 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatat 270  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||| |||| |||||||    
T  42990123 aatataatattctctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatactttcagcaaaaaatat 42990024  T
Q  271 atttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 340  Q
    ||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  42990023 atttgaaacaaattttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 42989954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 71 - 341
Target Start/End: Complemental strand, 42992224 - 42991954
Alignment:
Q  71 tatatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaa 169  Q
    |||||||||||||||||||||||||||||||||||||||   |||  ||||| || |||||          |||||||||||||||||||||||||||||    
T  42992224 tatatatttatagtaaaagtataactcataaatttggaattaatattacactgaa-gatacgtttttttttctccttcagtgaaagaatatttgcatcaa 42992126  T
Q  170 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaata 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||| |||||||||||    
T  42992125 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttcagcacaaaata 42992026  T
Q  270 tatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||| |||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||    
T  42992025 tatttgaaacaaaccttttatatttttaacaacaatattctccatccatcaaattttgagtcatactacaac 42991954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 73 - 341
Target Start/End: Complemental strand, 41849082 - 41848805
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatac----------nnnnnnnnnctccttcagtgaaagaatattt 162  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||                   ||| |||||| |||||||||||    
T  41849082 tatatttatagtaaaagtataactcataaatttggaacaaataccacact-gaagatacgttttttttttttttttttctctttcagttaaagaatattt 41848984  T
Q  163 gcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagca 262  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||    
T  41848983 gcatcaaaaatataatattccttttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagca 41848884  T
Q  263 caaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  41848883 caaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaac 41848805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 268 - 341
Target Start/End: Complemental strand, 6561687 - 6561614
Alignment:
Q  268 tatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  6561687 tatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaatttcgagtcatactacaac 6561614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 259 - 332
Target Start/End: Original strand, 53974124 - 53974197
Alignment:
Q  259 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 332  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||    
T  53974124 agcacaaaatataattgaaacaaatcttttatatttttaacaacaacattcttcatccatcaaattttgagtca 53974197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 259 - 332
Target Start/End: Complemental strand, 11072717 - 11072644
Alignment:
Q  259 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 332  Q
    ||||||| |||||||||||||||||| ||||||||||| |||||||| |||||| |||||||||||||||||||    
T  11072717 agcacaagatatatttgaaacaaatcatttatattttttgcaacaatcttcttcatccatcaaattttgagtca 11072644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 6561817 - 6561741
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 74  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| |   || |||||||||||||||||    
T  6561817 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactctgatacaaggtctatatttata 6561741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 176 - 332
Target Start/End: Complemental strand, 11066429 - 11066255
Alignment:
Q  176 aatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatattttta---------------- 259  Q
    ||||||| |||| ||||||||||||||||||||  | ||||||| |||| |||||| |||||||||||||||||| |||||| |                    
T  11066429 aatattctctttaaaaatatatttgcatcaaatattccttcatatggtaaaaaaatatatttattgtccataaatgtattttcaacaacaatcttccgaa 11066330  T
Q  260 -gcacaaaatatatttgaaacaaatcttttatattttt-agcaacaatattcttcttccatcaaattttgagtca 332  Q
     |||||| |||||||||||||||||| ||||| ||||| |||||||||||||||| ||||||||||| |||||||    
T  11066329 agcacaagatatatttgaaacaaatcatttatcttttttagcaacaatattcttcatccatcaaattatgagtca 11066255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 187 - 310
Target Start/End: Original strand, 54287487 - 54287627
Alignment:
Q  187 tcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttt-----------------tagcacaaaata 269  Q
    ||||||||||||||||||||||  | |||||||| |||||||||| |||||||| ||||||||||||||||                  ||||| |||||    
T  54287487 tcaaaatatatttgcatcaaatattccttcatacagtacaaaaatgtatttattatccataaatatattttcaacagcaatcttttggaagcacgaaata 54287586  T
Q  270 tatttgaaacaaatcttttatatttttagcaacaatattct 310  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  54287587 tatttgaaacaaatcttttatatttttagcaacaatcttct 54287627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 1626933 - 1626984
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  1626933 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggttta 1626984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 28137545 - 28137596
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  28137545 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggttta 28137596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 32219102 - 32219026
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 74  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||| |||||||   || |||||||||||||||||    
T  32219102 ttgttgttgcctttctgaacccttgtttcagccccctctatctcaaagtttagtcagatacaaggtctatatttata 32219026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 28102252 - 28102299
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaagg 48  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||    
T  28102252 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaagg 28102299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 43423713 - 43423764
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  43423713 ttgttgttgcctttctaaacccttgtttcagccccctctttctcaaggttta 43423764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 47701845 - 47701896
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  47701845 ttgttgttgcctttctaaacccttgtttcagccccctttatctcaaggttta 47701896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 192 - 258
Target Start/End: Original strand, 53974011 - 53974078
Alignment:
Q  192 atatatttgcatcaaatcgttctt-catacggtacaaaaatttatttattgtccataaatatattttt 258  Q
    |||||||||||||||||| | ||| |||||||||||||||| ||||||||||| ||||||||||||||    
T  53974011 atatatttgcatcaaatcttcctttcatacggtacaaaaatatatttattgtctataaatatattttt 53974078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 4308531 - 4308581
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  4308531 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagttt 4308581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 11163157 - 11163107
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  11163157 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagttt 11163107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 11170411 - 11170361
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  11170411 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagttt 11170361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 45882946 - 45882870
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 74  Q
    |||||||||||||||||||||||||||||||||||||| ||||||  ||||| |   || |||||||||||||||||    
T  45882946 ttgttgttgcctttctaaacccttgtttcagccccctctatctcatagtttactatgatacaaggtctatatttata 45882870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 35918199 - 35918244
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaa 46  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  35918199 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaa 35918244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 38890047 - 38889970
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc----aaggtttagtattcaaggtctatatttata 74  Q
    |||||||||||||||||||||||||||||||||||||| |||||    || ||||  ||| |||||||||||||||||    
T  38890047 ttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttgctatacaaggtctatatttata 38889970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 3314691 - 3314640
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||| ||||||||||||||| ||||||||||||| |||||||||||||    
T  3314691 ttgttgttacctttctaaacccttatttcagccccctctatctcaaggttta 3314640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 3859535 - 3859492
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  3859535 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 3859492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 5191660 - 5191617
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  5191660 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 5191617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 5522865 - 5522908
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  5522865 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 5522908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 5927014 - 5927065
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||| ||||||||||||||||||||||| ||| |||||||||||||    
T  5927014 ttgttgttgcatttctaaacccttgtttcagccctctctatctcaaggttta 5927065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 6063696 - 6063739
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  6063696 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 6063739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 24979714 - 24979663
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| |||||    
T  24979714 ttgttgttgtctttctaaacccttgtttcagccccctctatctcaaagttta 24979663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 28100291 - 28100338
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaagg 48  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||    
T  28100291 ttgttgttgcttttctaaacccttgtttcagccccctctatctcaagg 28100338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 28761678 - 28761729
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||| |||||||||||||||||||| ||||||| |||||||||||||    
T  28761678 ttgttgttgtctttctaaacccttgtttcaaccccctctatctcaaggttta 28761729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 30005848 - 30005805
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  30005848 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 30005805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 42990311 - 42990268
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  42990311 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 42990268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 43226093 - 43226050
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  43226093 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 43226050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 43421665 - 43421716
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||||||| |||| || |||||||||||||    
T  43421665 ttgttgttgcctttctaaacccttgtttcaaccccttctatctcaaggttta 43421716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 47149145 - 47149188
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  47149145 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 47149188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 51675005 - 51675056
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| |||||    
T  51675005 ttgttgttgtctttctaaacccttgtttcagccccctctatctcaacgttta 51675056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 15780867 - 15780791
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 74  Q
    ||||||||||| |||||||||||||||||||||||||| ||||| | ||||| |   || |||||||||||||||||    
T  15780867 ttgttgttgccattctaaacccttgtttcagccccctctatctccaagtttactctgatacaaggtctatatttata 15780791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 35777428 - 35777378
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||| ||||    
T  35777428 ttgttgttgcttttctaaacccttgtttcagccccctctatctcaaagttt 35777378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 51727256 - 51727306
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    |||||||||||||||||||||||||||||||||||||  ||||||| ||||    
T  51727256 ttgttgttgcctttctaaacccttgtttcagccccctttatctcaaagttt 51727306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 257
Target Start/End: Complemental strand, 11072801 - 11072736
Alignment:
Q  192 atatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttt 257  Q
    |||||||||||||||||| | | | ||||||||||||||| ||||| |||||||||||| ||||||    
T  11072801 atatatttgcatcaaatcttccgtaatacggtacaaaaatctatttgttgtccataaatgtatttt 11072736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 25533449 - 25533412
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctc 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25533449 ttgttgttgcctttctaaacccttgtttcagccccctc 25533412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 32264289 - 32264334
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaa 46  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||    
T  32264289 ttgttgttgcctttctaaacccttgtttgagccccctctatctcaa 32264334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 880702 - 880753
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||||| |||||||| |||||||||| |||||| |||||||||||||    
T  880702 ttgttgttgccattctaaactcttgtttcagacccctctatctcaaggttta 880753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 1321441 - 1321398
Alignment:
Q  8 tgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||    
T  1321441 tgcctttctaaacccttgtttcagccccctctatctcaaagttt 1321398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 6066046 - 6066081
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccc 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  6066046 ttgttgttgcctttctaaacccttgtttcagccccc 6066081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 6231456 - 6231405
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||||||||||||| |||||||||||||| ||| |||||||| ||||    
T  6231456 ttgttgttgcctttctaaatccttgtttcagcccgctctatctcaagattta 6231405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 18099420 - 18099463
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    ||||||||||| |||||||||||||||||||||||||| |||||    
T  18099420 ttgttgttgccattctaaacccttgtttcagccccctctatctc 18099463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 26720555 - 26720512
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||| ||||||||||||| |||||    
T  26720555 ttgttgttgcctttctaaacccttatttcagccccctctatctc 26720512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 27101431 - 27101474
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    ||||||||||||||||||||||||||||||||| |||| |||||    
T  27101431 ttgttgttgcctttctaaacccttgtttcagcctcctctatctc 27101474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 38210377 - 38210334
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||| ||||||||||||||||||||||||||| |||||    
T  38210377 ttgttgttgcttttctaaacccttgtttcagccccctctatctc 38210334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 42992293 - 42992250
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||| ||||||||||||||||||||||| |||||    
T  42992293 ttgttgttgcctttttaaacccttgtttcagccccctctatctc 42992250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 43228298 - 43228255
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||| ||||||||||||||||| |||||    
T  43228298 ttgttgttgcctttctaaactcttgtttcagccccctctatctc 43228255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 50494006 - 50493963
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||| ||||||||||||||||||||||||||| |||||    
T  50494006 ttgttgttgcttttctaaacccttgtttcagccccctctatctc 50493963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 53468705 - 53468756
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||||| |||||||||||||||||||||||||  |||| ||||||||    
T  53468705 ttgttgttgccattctaaacccttgtttcagccccctttatctaaaggttta 53468756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 53591202 - 53591151
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||| |||||||||| |||||||||||| |||| |||||||||||||    
T  53591202 ttgttgttgtctttctaaactcttgtttcagcctcctctatctcaaggttta 53591151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 54884164 - 54884113
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||||  ||| ||||| |||||||||||||    
T  54884164 ttgttgttgcctttctaaacccttgttcgagctccctctatctcaaggttta 54884113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 10956277 - 10956319
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatct 43  Q
    ||||||||||| |||||||||||||||||||||||||| ||||    
T  10956277 ttgttgttgccattctaaacccttgtttcagccccctctatct 10956319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 10958573 - 10958615
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatct 43  Q
    ||||||||||| |||||||||||||||||||||||||| ||||    
T  10958573 ttgttgttgccattctaaacccttgtttcagccccctctatct 10958615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 746764 - 746727
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctc 38  Q
    |||||||||| |||||||||||||||||||||||||||    
T  746764 ttgttgttgcttttctaaacccttgtttcagccccctc 746727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 36011832 - 36011783
Alignment:
Q  3 gttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||| ||||||||| |||||||||||||||||  |||||||||||||    
T  36011832 gttgttgtctttctaaatccttgtttcagccccctttatctcaaggttta 36011783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 890024 - 890072
Alignment:
Q  4 ttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||| ||||||||||||||||||||  |||| |||||||||||||    
T  890024 ttgttgccattctaaacccttgtttcagcttcctctatctcaaggttta 890072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 3306806 - 3306755
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||  ||||||||||||||||||||||||||  ||||| |||||||    
T  3306806 ttgttgttgtatttctaaacccttgtttcagccccctatatctctaggttta 3306755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 4560515 - 4560566
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||| ||||| |||||| |||||||||||||||| ||||||| |||||    
T  4560515 ttgttgttacctttataaaccattgtttcagccccctctatctcaatgttta 4560566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 9604857 - 9604899
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    ||||||||||||||||||| |||||||||||||||||| |||||    
T  9604857 ttgttgttgcctttctaaa-ccttgtttcagccccctctatctc 9604899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 10084639 - 10084682
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    ||||| ||||||||||||||||||||| |||||||||| |||||    
T  10084639 ttgttattgcctttctaaacccttgttccagccccctctatctc 10084682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 12268216 - 12268267
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||| |||||||||| ||||||||||| ||||| ||||||| |||||    
T  12268216 ttgttgttgtctttctaaactcttgtttcagctccctctatctcaaagttta 12268267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 18097150 - 18097193
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    ||||||||||| |||||||||||||||| ||||||||| |||||    
T  18097150 ttgttgttgccattctaaacccttgtttgagccccctctatctc 18097193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 22114555 - 22114598
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    ||||| ||||||||||||||||||||||||||||| || |||||    
T  22114555 ttgtttttgcctttctaaacccttgtttcagccccttctatctc 22114598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 29956693 - 29956650
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||  ||||||||||||||||||||||||||| |||||    
T  29956693 ttgttgttgaatttctaaacccttgtttcagccccctctatctc 29956650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 10621780 - 10621817
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctc 38  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  10621780 ttgttgttgcttttctaaacccttgtttcagcaccctc 10621817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 18162670 - 18162641
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttca 30  Q
    ||||||||||||||||||||||||||||||    
T  18162670 ttgttgttgcctttctaaacccttgtttca 18162641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 6484373 - 6484341
Alignment:
Q  20 cccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||||||||||||| |||||||||||||    
T  6484373 cccttgtttcagccccctctatctcaaggttta 6484341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 10191559 - 10191595
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccct 37  Q
    ||||| ||||||||||||||||||||| |||||||||    
T  10191559 ttgttattgcctttctaaacccttgttccagccccct 10191595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 28181029 - 28180980
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||| |||||||||||  | ||||||||||||| |||||||||||||    
T  28181029 ttgttgttgtctttctaaacc--tatttcagccccctctatctcaaggttta 28180980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 203; Significance: 1e-111; HSPs: 98)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 73 - 341
Target Start/End: Original strand, 31735846 - 31736114
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 171  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||          |||||||||||||||||||||||||||||||    
T  31735846 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gatacgtttttttttctccttcagtgaaagaatatttgcatcaaaa 31735944  T
Q  172 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatata 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  31735945 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatata 31736044  T
Q  272 tttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  31736045 tttgaaacaaatcttttatatttttagcaacaatattctccttccatcaaattttgagtcatactacaac 31736114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 73 - 341
Target Start/End: Complemental strand, 47906224 - 47905957
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaa 172  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||         |||||||| |||||||||||||||||||||||    
T  47906224 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gatactttttttttctccttcaatgaaagaatatttgcatcaaaaa 47906126  T
Q  173 tataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatat 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  47906125 tataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatat 47906026  T
Q  273 ttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  47906025 ttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaac 47905957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 73 - 341
Target Start/End: Complemental strand, 24325616 - 24325348
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 171  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||          |||||||||||||||||||||||||||||||    
T  24325616 tatatttatagtaaaagtataactcataaatttggaacaaataccacactaaa-gatacatttttttttctccttcagtgaaagaatatttgcatcaaaa 24325518  T
Q  172 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatata 271  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||| |||||    
T  24325517 atataatattcactttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaatatata 24325418  T
Q  272 tttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  24325417 tttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaac 24325348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 141 - 341
Target Start/End: Original strand, 15295238 - 15295438
Alignment:
Q  141 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttatt 240  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  15295238 ctccttcagtgaaagaatatttgcatcaaaaatataatattcgctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttatt 15295337  T
Q  241 gtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 340  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15295338 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 15295437  T
Q  341 c 341  Q
    |    
T  15295438 c 15295438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 73 - 341
Target Start/End: Original strand, 9459744 - 9460012
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 171  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| | || |||||          |||||||| ||||||||||||||||||||||    
T  9459744 tatatttatagtaaaagtataactcataaatttggaacaaataccacaatgaa-gatacgtttttttttctccttcaatgaaagaatatttgcatcaaaa 9459842  T
Q  172 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatata 271  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||    
T  9459843 atataatattccctttcaaaatatatttgcattaaattgttcttcatacggtataaaaatatatttattgtccataaatatattttcagcacaaaatata 9459942  T
Q  272 tttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  9459943 tttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaac 9460012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 1 - 341
Target Start/End: Original strand, 28998507 - 28998843
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactc 97  Q
    ||||||||| | ||||||||||||||||||||| |||| ||||||| ||||| |   |||||| |||||||||||||        |||||||||||||||    
T  28998507 ttgttgttgtcattctaaacccttgtttcagcctcctctatctcaaagtttactctgattcaaagtctatatttata--------gtaaaagtataactc 28998598  T
Q  98 ataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatat 195  Q
    |||||||||||||  |||||||||||||  ||||           |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28998599 ataaatttggaacgaataccacactaaat-atacggtttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatat 28998697  T
Q  196 atttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttt 295  Q
    |||||||||||||  |||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||    
T  28998698 atttgcatcaaatatttcttcgtacggtacaaaaatgtatttattgtccataaatatattttcagcacaaaatatattttaaacaaatcttttatagttt 28998797  T
Q  296 tagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||    
T  28998798 tagcaacaatattctccatccatcaaattttgagtcatactacaac 28998843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 1 - 341
Target Start/End: Original strand, 29004223 - 29004559
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactc 97  Q
    ||||||||| | ||||||||||||||||||||| |||| ||||||| ||||| |   |||||| |||||||||||||        |||||||||||||||    
T  29004223 ttgttgttgtcattctaaacccttgtttcagcctcctctatctcaaagtttactctgattcaaagtctatatttata--------gtaaaagtataactc 29004314  T
Q  98 ataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatat 195  Q
    |||||||||||||  |||||||||||||  ||||           |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29004315 ataaatttggaacgaataccacactaaat-atacggtttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatat 29004413  T
Q  196 atttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttt 295  Q
    |||||||||||||  |||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||    
T  29004414 atttgcatcaaatatttcttcgtacggtacaaaaatgtatttattgtccataaatatattttcagcacaaaatatattttaaacaaatcttttatagttt 29004513  T
Q  296 tagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||    
T  29004514 tagcaacaatattctccatccatcaaattttgagtcatactacaac 29004559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 73 - 341
Target Start/End: Original strand, 9463571 - 9463839
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 171  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| | || |||||          |||||||| ||||||||||||||||||||||    
T  9463571 tatatttatagtaaaagtataactcataaatttggaacaaataccacaatgaa-gatacgtttttttttctccttcaatgaaagaatatttgcatcaaaa 9463669  T
Q  172 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatata 271  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||| || |||||| ||||||||||||||||||||||||| |||||||||||||    
T  9463670 atataatattccctttcaaaatatatttgcattaaattgttcttcatacgatataaaaatatatttattgtccataaatatattttcagcacaaaatata 9463769  T
Q  272 tttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  9463770 tttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaac 9463839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 1 - 341
Target Start/End: Complemental strand, 39932100 - 39931763
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc--aaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataac 95  Q
    |||||||||||||||||||||||||||||||||||||| |||||  || |||| ||   || |||||||||||||||||        |||||  ||||||    
T  39932100 ttgttgttgcctttctaaacccttgtttcagccccctctatctctcaaagttttgtctcatacaaggtctatatttata--------gtaaacatataac 39932009  T
Q  96 tcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaata 194  Q
    |||||||||||||||  |||| ||||| || |||||          |||||||| | |||||||||||||||||||| ||||||||||||||||||||||    
T  39932008 tcataaatttggaacgaatactacactgaa-gatacgtttttttttctccttcaataaaagaatatttgcatcaaaagtataatattccctttcaaaata 39931910  T
Q  195 tatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatattt 294  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  39931909 tatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattt 39931810  T
Q  295 ttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||    
T  39931809 ttagcaacaatattctccatccatcaaattttgagtcatactacaac 39931763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 341
Target Start/End: Original strand, 27337192 - 27337531
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc----aaggtttagt---attcaaggtctatatttatatatttatagtaaaagtata 93  Q
    |||||||||||||||||||||||||||||||||||||| |||||    || ||||||    || |||||||||||||||||        |||||||||||    
T  27337192 ttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctaatacaaggtctatatttata--------gtaaaagtata 27337283  T
Q  94 actcataaatttggaacagataccacactaaaagatacnnnnnnnnnct-ccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 192  Q
    || ||||||||||||||| |||||||| |  |||||||          | |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  27337284 acgcataaatttggaacaaataccaca-tcgaagatacgtttttttttttccttcagttaaagaatatttgcatcaaaaatataatattccctttcaaaa 27337382  T
Q  193 tatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatat 292  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  27337383 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttatatat 27337482  T
Q  293 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||||||||||||  | |||||||||||| |||||||||||||||    
T  27337483 ttttagcaacaatattccccatccatcaaatttggagtcatactacaac 27337531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 144 - 341
Target Start/End: Complemental strand, 48665050 - 48664853
Alignment:
Q  144 cttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtc 243  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  48665050 cttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatgtgcatcaaatcgttcttcatacggtacaaaaatatatttattgtc 48664951  T
Q  244 cataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  48664950 cataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaac 48664853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 73 - 341
Target Start/End: Original strand, 27339455 - 27339729
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnnct---ccttcagtgaaagaatatttgcatcaa 169  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||          |   |||||||||||||||||||||||||||    
T  27339455 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gatacgttcttttttttttccttcagtgaaagaatatttgcatcaa 27339553  T
Q  170 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataa----atatatttttagcacaa 265  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    ||||||||| |||||||    
T  27339554 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatatattttcagcacaa 27339653  T
Q  266 aatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||| |||||||||||||||    
T  27339654 aatatatttgaaacaaatcttttatatttttagcaacaatattctccatccgtcaaatttggagtcatactacaac 27339729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 73 - 341
Target Start/End: Original strand, 17324957 - 17325226
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 170  Q
    ||||||||||||||||||||||||||||||||||||||  ||| ||| || || |||||           |||||||||||||||||||||||||| |||    
T  17324957 tatatttatagtaaaagtataactcataaatttggaacgaatatcaccctgaa-gatacgttttttttttctccttcagtgaaagaatatttgcataaaa 17325055  T
Q  171 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatat 270  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| | | ||||||||    
T  17325056 aatataatattcccttgcaaaatatatttgcatcaaatcgtttttcatacggtacaaaaatatatttattgtccataaatatattttcaactcaaaatat 17325155  T
Q  271 atttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  17325156 atttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaac 17325226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 337
Target Start/End: Original strand, 2949485 - 2949810
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagtattcaaggtctatatttatatatttatagtaaaagtataactcata 100  Q
    ||||||||| | |||||||||||||||||||||||||| ||||||||||||     ||  ||  |  || | ||||||||| ||||||||||||||||||    
T  2949485 ttgttgttgtcattctaaacccttgtttcagccccctctatctcaaggttt-----tctcggattcaatatctatatttattgtaaaagtataactcata 2949579  T
Q  101 aatttggaacagataccacactaaaagatacnnnnnnnnnctc-cttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatattt 199  Q
    ||||||||||  ||||||       ||||||          || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  2949580 aatttggaacgaatacca-------agatacgttttttttttctcttcagtgaaagaatatttgtatcaaaaatataatattccctttcaaaatatattt 2949672  T
Q  200 gcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttttagc 299  Q
    |||||||||| ||||||||||  ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  2949673 gcatcaaatcattcttcatacaatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagc 2949772  T
Q  300 aacaatattcttcttccatcaaattttgagtcatacta 337  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  2949773 aacaatattcttcatccatgaaattttgagtcatacta 2949810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 21948441 - 21948751
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc----aaggtttagtatt---caaggtctatatttatatatttatagtaaaagtata 93  Q
    |||||||||||||||||||||||||||||||||||||| |||||    || |||||||||    |||||||||||||||||        |||||  ||||    
T  21948441 ttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtatgatacaaggtctatatttata--------gtaaacatata 21948532  T
Q  94 actcataaatttggaacagataccacactaaaagatacnnnnnnnnn---ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaa 190  Q
    |||||||||||||||||  |||||||||| || |||||            ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21948533 actcataaatttggaacgaataccacactgaa-gatacgttttttttttcctccttctgtgaaagaatatttgcatcaaaaatataatattccctttcaa 21948631  T
Q  191 aatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttat 290  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  21948632 aatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttat 21948731  T
Q  291 atttttagcaacaatattct 310  Q
    ||||||||||||||||||||    
T  21948732 atttttagcaacaatattct 21948751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 152 - 341
Target Start/End: Original strand, 45693834 - 45694023
Alignment:
Q  152 aaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaata 251  Q
    ||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  45693834 aaagaatatttgcataaaaaatatattattctctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaata 45693933  T
Q  252 tatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||| ||||||    
T  45693934 tatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgaatcatagtacaac 45694023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 150 - 341
Target Start/End: Original strand, 4131690 - 4131881
Alignment:
Q  150 tgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttatt-gtccataa 248  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  4131690 tgaaagaatatttgcatcaaaa-tataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttatttgtccataa 4131788  T
Q  249 atatatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  4131789 atatatgttcaacacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaac 4131881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 157 - 341
Target Start/End: Original strand, 6115532 - 6115717
Alignment:
Q  157 atatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatattt 256  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||| ||||||||||||||||||||||||    
T  6115532 atatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtcattcatacgatacaaaaatatatttattgtccataaatatattt 6115631  T
Q  257 ttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaa-ttttgagtcatactacaac 341  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||| |||||||    
T  6115632 tcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttttgagtcatcctacaac 6115717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 154 - 337
Target Start/End: Complemental strand, 6997395 - 6997219
Alignment:
Q  154 agaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatata 253  Q
    ||||||||||||||||||||||||||||| |||||||      |||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||    
T  6997395 agaatatttgcatcaaaaatataatattctctttcaa------tttgcatcaaatcgttcttcatacggtataaaaatatatttattgtccataa-tata 6997303  T
Q  254 tttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatacta 337  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||    
T  6997302 tttttagcacaaaatatatttgaaacaaatcttttatatttttagcaataatattctccatccatcaaattttgagtcatacta 6997219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 144 - 304
Target Start/End: Complemental strand, 6996221 - 6996067
Alignment:
Q  144 cttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtc 243  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||      ||| ||||||||||||||||||||||||||||||| ||| |||||||    
T  6996221 cttcagtgaaagaatatttgcaacaaaaatataatattccctttcaa------tttacatcaaatcgttcttcatacggtacaaaaatatatgtattgtc 6996128  T
Q  244 cataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaa 304  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  6996127 cataaatatattttcagcacaaaatatatttgaaacaagtcttttatatttttagcaacaa 6996067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 227 - 341
Target Start/End: Original strand, 46432521 - 46432635
Alignment:
Q  227 aaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaatttt 326  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  46432521 aaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttt 46432620  T
Q  327 gagtcatactacaac 341  Q
    |||||||||||||||    
T  46432621 gagtcatactacaac 46432635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 46432049 - 46432207
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 170  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| | || |||||           ||||||||||||||||||||||||||||||    
T  46432049 tatatttatagtaaaagtataactcataaatttggaacaaataccacagtgaa-gatacgttttttttttctccttcagtgaaagaatatttgcatcaaa 46432147  T
Q  171 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaa 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  46432148 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaa 46432207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 189 - 341
Target Start/End: Complemental strand, 16561284 - 16561132
Alignment:
Q  189 aaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatctttt 288  Q
    ||||||||||||  ||||||  | ||||||||||||||||||  ||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||    
T  16561284 aaaatatatttgtttcaaatattccttcatacggtacaaaaagatatttattgtcaataaatatattttcagcacaaaatatatttgaaacaaatatttt 16561185  T
Q  289 atatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||| |||||    
T  16561184 atatttttagcaacaatattcttcatccaacaaattttgaatcatacaacaac 16561132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 73 - 220
Target Start/End: Original strand, 2510649 - 2510801
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnnct------ccttcagtgaaagaatatttgcat 166  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||         ||      ||||||||||||||||||||||||    
T  2510649 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaaa-atacgttttttttctttccctccttcagtgaaagaatatttgcat 2510747  T
Q  167 caaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatac 220  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2510748 caaaaatataatattctctttcaaaatatatttgcatcaaatcgttcttcatac 2510801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 11693580 - 11693666
Alignment:
Q  176 aatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagca 262  Q
    |||||||||||| ||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  11693580 aatattccctttaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatatttattgtccataaatatattttcagca 11693666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 144 - 208
Target Start/End: Original strand, 26520516 - 26520580
Alignment:
Q  144 cttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaat 208  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26520516 cttcggtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaat 26520580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 141 - 203
Target Start/End: Original strand, 6115479 - 6115541
Alignment:
Q  141 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcat 203  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6115479 ctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcat 6115541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 176 - 332
Target Start/End: Original strand, 13785662 - 13785835
Alignment:
Q  176 aatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagca------------- 262  Q
    |||||||| ||| ||||||||||||||||||||| | ||||||||| ||||||||| |||||| | || ||||||||||||| ||||                 
T  13785662 aatattccttttaaaaatatatttgcatcaaatcttccttcatacgatacaaaaatatatttactatctataaatatattttcagcaacaatattctaga 13785761  T
Q  263 ----caaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 332  Q
        ||||||||||||||||||||||||| ||||||||||| |||||||||| | |||||||| ||||||||||    
T  13785762 aacacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccatccatcaatttttgagtca 13785835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 261 - 332
Target Start/End: Complemental strand, 32260817 - 32260746
Alignment:
Q  261 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 332  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  32260817 cacaaaatatattttaaacaattcttttatatttttagcaacaatcttcttcatccatcaaattttgagtca 32260746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 14352842 - 14352761
Alignment:
Q  176 aatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttt 257  Q
    |||||||||||| ||||||||||||||||||||| | ||||||||||||||||||| |||||| | | ||||||||||||||    
T  14352842 aatattccctttaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatatttactattcataaatatatttt 14352761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 17318920 - 17318869
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  17318920 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggttta 17318869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 18307136 - 18307085
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  18307136 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggttta 18307085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 25248768 - 25248819
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  25248768 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggttta 25248819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 31423128 - 31423179
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  31423128 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggttta 31423179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 28207320 - 28207396
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 74  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| |||||||   || |||||||||||||||||    
T  28207320 ttgttgttgtctttctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttata 28207396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 6995954 - 6996058
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactc 97  Q
    ||||||||||||||||||||| ||||||| |||||||| |||||||| |||| |   ||||||||||        |||||||||| ||||||||||||||    
T  6995954 ttgttgttgcctttctaaaccgttgtttcggccccctctatctcaagatttactctgattcaaggtc--------tatatttataataaaagtataactc 6996045  T
Q  98 ataaatttggaac 110  Q
    |||||||||||||    
T  6996046 ataaatttggaac 6996058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 48665204 - 48665082
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctcc------atctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagta 91  Q
    |||||||||||||||||||||||||||||| ||||||||      |||| |||||||| |   ||||||||||||||||||||        |||||||||    
T  48665204 ttgttgttgcctttctaaacccttgtttcaaccccctccccctctatcttaaggtttactctgattcaaggtctatatttata--------gtaaaagta 48665113  T
Q  92 taactcataaatttggaacagataccacact 122  Q
    |||||||||||||||||||| |||| |||||    
T  48665112 taactcataaatttggaacaaatactacact 48665082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 176 - 305
Target Start/End: Complemental strand, 10115653 - 10115509
Alignment:
Q  176 aatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatattttta---------------- 259  Q
    |||||||| ||| ||||||||||||||||||||  | |||||||||| | ||||||  |||||||||||||||||||||||| |                    
T  10115653 aatattccgtttaaaaatatatttgcatcaaatattccttcatacgggataaaaat--atttattgtccataaatatattttcaacaacaatcttatgga 10115556  T
Q  260 -gcacaaaatatatttgaaacaaatcttttatatttttagcaacaat 305  Q
     |||||||||||||||||||||||||||||||||||||| |||||||    
T  10115555 agcacaaaatatatttgaaacaaatcttttatatttttaacaacaat 10115509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 31425273 - 31425324
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  31425273 ttgttgttgcctttctaaacccttgtttcagccccctttatctcaaggttta 31425324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 6823042 - 6822992
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  6823042 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagttt 6822992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 13215108 - 13215032
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 74  Q
    |||||||||||||||||||||||||||||||||||||| |||||||  |||| |   || |||||||||||||||||    
T  13215108 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaaatttactctgatacaaggtctatatttata 13215032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 17186382 - 17186432
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  17186382 ttgttgttgcctttctaaacccttatttcagccccctctatctcaaggttt 17186432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 20302486 - 20302436
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  20302486 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagttt 20302436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 41646947 - 41646871
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 74  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||| ||||| |   || |||||||||||||||||    
T  41646947 ttgttgttgcctttctaaacccttatttcagccccctctatctcaaagtttactctgatacaaggtctatatttata 41646871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 11457729 - 11457780
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||| ||||||||||| |||||||||||||||| |||||||||||||    
T  11457729 ttgttgttgtctttctaaaccattgtttcagccccctctatctcaaggttta 11457780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 332
Target Start/End: Original strand, 11693686 - 11693753
Alignment:
Q  265 aaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 332  Q
    |||||||||| |||||||  ||||||| ||||||||| ||| |||||| |||||||||||||||||||    
T  11693686 aaatatatttaaaacaaaatttttataattttagcaataatcttcttcatccatcaaattttgagtca 11693753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 18839614 - 18839563
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||| ||||||||||||||||||||||||| |||||| ||||||    
T  18839614 ttgttgttgcctatctaaacccttgtttcagccccctctatctcatggttta 18839563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 25251529 - 25251580
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||| ||||||||||| |||||||||||||||| |||||||||||||    
T  25251529 ttgttgttgtctttctaaacctttgtttcagccccctctatctcaaggttta 25251580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 28842522 - 28842479
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  28842522 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 28842479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 31489942 - 31489891
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||| ||||||||||||||||||||| ||||||| |||||||||||||    
T  31489942 ttgttgttacctttctaaacccttgtttcaaccccctctatctcaaggttta 31489891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 50079075 - 50079126
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||| || |||||||||||||||||||||||||||| |||||||||||||    
T  50079075 ttgttgctgtctttctaaacccttgtttcagccccctctatctcaaggttta 50079126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 51750066 - 51750023
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  51750066 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 51750023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 15823573 - 15823497
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 74  Q
    |||||||||||||||||||||||||||||||||||||  ||||| | ||||| |   || |||||||||||||||||    
T  15823573 ttgttgttgcctttctaaacccttgtttcagccccctttatctctaagtttactttgatacaaggtctatatttata 15823497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 16428680 - 16428638
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatct 43  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  16428680 ttgttgttgcctttctaaacccttgtttcagccccctctatct 16428638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 38925732 - 38925808
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 74  Q
    |||||||||||||||| ||| ||||||||||||||||| ||||||| ||||| |   || |||||||||||||||||    
T  38925732 ttgttgttgcctttctgaactcttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttata 38925808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 6115344 - 6115385
Alignment:
Q  12 tttctaaacccttgtttcagccccctccatctcaaggtttag 53  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  6115344 tttctaaacccttgtttcagccccctctatctcaaggtttag 6115385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 9463498 - 9463535
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctc 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9463498 ttgttgttgcctttctaaacccttgtttcagccccctc 9463535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 32260882 - 32260838
Alignment:
Q  213 cttcatacggtacaaaaatttatttattgtccataaatatatttt 257  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||    
T  32260882 cttcatacggtacaaaaatatatttattgttcataaatatatttt 32260838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 6756554 - 6756503
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||| |||||||||||| |||||| || ||||||||||    
T  6756554 ttgttgttgcctttctaagcccttgtttcagtcccctctatttcaaggttta 6756503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 6823912 - 6823877
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccc 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  6823912 ttgttgttgcctttctaaacccttgtttcagccccc 6823877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 12302759 - 12302802
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||| ||||||||||||||||||||||||||| |||||    
T  12302759 ttgttgttgcatttctaaacccttgtttcagccccctctatctc 12302802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 15295088 - 15295131
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||| ||| |||||    
T  15295088 ttgttgttgcctttctaaacccttgtttcagccctctctatctc 15295131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 25127899 - 25127856
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    ||||||||||||||||||||||||||||||| |||||| |||||    
T  25127899 ttgttgttgcctttctaaacccttgtttcaggcccctctatctc 25127856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 46431961 - 46431996
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccc 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  46431961 ttgttgttgcctttctaaacccttgtttcagccccc 46431996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 47177389 - 47177346
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||| ||||||||||||||||||||||||||| |||||    
T  47177389 ttgttgttgcttttctaaacccttgtttcagccccctctatctc 47177346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 47179740 - 47179697
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||| ||||||||||||||||||||||||||| |||||    
T  47179740 ttgttgttgcttttctaaacccttgtttcagccccctctatctc 47179697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 2617543 - 2617493
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    ||||||||| ||||||||||||||||||||||| |||| ||||||| ||||    
T  2617543 ttgttgttgtctttctaaacccttgtttcagcctcctctatctcaaagttt 2617493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 13761863 - 13761821
Alignment:
Q  2 tgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    ||||||||||||||||||||||||||||||||| ||| |||||    
T  13761863 tgttgttgcctttctaaacccttgtttcagccctctctatctc 13761821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 14098224 - 14098300
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 74  Q
    |||| ||||||||| |||||| ||||||||| |||||| ||||||| |||||||   || |||||||||||||||||    
T  14098224 ttgtagttgcctttttaaaccattgtttcagtcccctctatctcaaagtttagtttgatacaaggtctatatttata 14098300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 47451675 - 47451599
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 74  Q
    ||||||||||| ||| |||||||||||| ||||||||| ||||||| ||||| |   || |||||||||||||||||    
T  47451675 ttgttgttgccattccaaacccttgtttaagccccctctatctcaaagtttactctgatacaaggtctatatttata 47451599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 9459671 - 9459708
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctc 38  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  9459671 ttgttgttgactttctaaacccttgtttcagccccctc 9459708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 275
Target Start/End: Original strand, 13112046 - 13112099
Alignment:
Q  222 gtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttg 275  Q
    |||||||||| |||||||||||||| |||||||||| |||| |||||| |||||    
T  13112046 gtacaaaaatatatttattgtccatgaatatattttcagcataaaatacatttg 13112099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 20291484 - 20291439
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaa 46  Q
    |||||||||||||||||||||||||||||| | ||||| |||||||    
T  20291484 ttgttgttgcctttctaaacccttgtttcatctccctctatctcaa 20291439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 31735775 - 31735812
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctc 38  Q
    |||||||||||||||||||||||||||| |||||||||    
T  31735775 ttgttgttgcctttctaaacccttgttttagccccctc 31735812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 47906297 - 47906260
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctc 38  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  47906297 ttgttgttgccattctaaacccttgtttcagccccctc 47906260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 16432432 - 16432396
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccct 37  Q
    ||||||||||||||||||||||||||||| |||||||    
T  16432432 ttgttgttgcctttctaaacccttgtttctgccccct 16432396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 49495468 - 49495504
Alignment:
Q  16 taaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||||||||||||||||| |||||||||||||    
T  49495468 taaacccttgtttcagccccctctatctcaaggttta 49495504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 4131633 - 4131676
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    ||||||||||| ||||||| |||||||||||||||||| |||||    
T  4131633 ttgttgttgccattctaaatccttgtttcagccccctctatctc 4131676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 52
Target Start/End: Original strand, 8347535 - 8347574
Alignment:
Q  13 ttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||| ||||||| |||||||||||||    
T  8347535 ttctaaacccttgtttcaaccccctctatctcaaggttta 8347574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 10400082 - 10400125
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    ||||||||| | |||||||||||||||||||||||||| |||||    
T  10400082 ttgttgttgtcattctaaacccttgtttcagccccctctatctc 10400125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 52
Target Start/End: Original strand, 14183852 - 14183891
Alignment:
Q  13 ttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||| ||| |||||||||||||    
T  14183852 ttctaaacccttgtttcagccctctctatctcaaggttta 14183891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 16231625 - 16231578
Alignment:
Q  4 ttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    ||||||| |||||| |||||||||||||||||||| ||||||| ||||    
T  16231625 ttgttgcttttctagacccttgtttcagccccctctatctcaaagttt 16231578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 295
Target Start/End: Original strand, 16855265 - 16855296
Alignment:
Q  264 aaaatatatttgaaacaaatcttttatatttt 295  Q
    ||||||||||||||||||||||||||||||||    
T  16855265 aaaatatatttgaaacaaatcttttatatttt 16855296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 17324092 - 17324041
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||| |||||||| ||||||||||| ||||| ||| |||||||||||||    
T  17324092 ttgttgtggcctttctgaacccttgttttagccctctctatctcaaggttta 17324041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 50076926 - 50076977
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||| ||||||||| ||||||||||||||  || |||||||||||||    
T  50076926 ttgttgttgtctttctaaatccttgtttcagccctttctatctcaaggttta 50076977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 50248826 - 50248877
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||| |||| |||||| |||||||||| ||||| |||||||||||||    
T  50248826 ttgttgttgtctttttaaacctttgtttcagctccctctatctcaaggttta 50248877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 50307801 - 50307852
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||| |||||||||||||||||| |||||||||| |  |||||||||||||    
T  50307801 ttgttattgcctttctaaacccttttttcagccccatatatctcaaggttta 50307852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 51752392 - 51752349
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||| ||||||||||| ||||||||||||||||| |||||    
T  51752392 ttgttgttacctttctaaactcttgtttcagccccctctatctc 51752349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 8349314 - 8349352
Alignment:
Q  13 ttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    |||||||||||||||||||||| ||| ||||||||||||    
T  8349314 ttctaaacccttgtttcagccctctctatctcaaggttt 8349352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 16226194 - 16226144
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    |||||||||| ||||||||||||||||| || |||||| ||||||| ||||    
T  16226194 ttgttgttgcttttctaaacccttgttttagacccctctatctcaaagttt 16226144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 27339387 - 27339421
Alignment:
Q  4 ttgttgcctttctaaacccttgtttcagccccctc 38  Q
    ||||||||||||||| |||||||||||||||||||    
T  27339387 ttgttgcctttctaagcccttgtttcagccccctc 27339421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 111
Target Start/End: Complemental strand, 42922194 - 42922156
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaaca 111  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  42922194 tatatttatagtaaaagtatccctcataaatttggaaca 42922156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 2510578 - 2510615
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctc 38  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  2510578 ttgtggttgcctttataaacccttgtttcagccccctc 2510615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 15295169 - 15295218
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacact 122  Q
    |||||||||||||||  ||||||||||||||| |||||  ||||||||||    
T  15295169 tatatttatagtaaacatataactcataaattaggaacgaataccacact 15295218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 24325690 - 24325654
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctc 38  Q
    |||||||||||||||||| |||||||||||||||||||    
T  24325690 ttgttgttgcctttctaa-cccttgtttcagccccctc 24325654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 9241340 - 9241391
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcag-ccccctccatctcaaggttta 52  Q
    ||||||||||||||||||| ||||||||||| ||||||| |||| ||||||||    
T  9241340 ttgttgttgcctttctaaa-ccttgtttcagcccccctctatcttaaggttta 9241391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 17324890 - 17324926
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccct 37  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  17324890 ttgttgttgccattctaaacccttgttttagccccct 17324926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 28840707 - 28840671
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccct 37  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  28840707 ttgttgtttcctttctaaacccttgtttcatccccct 28840671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 199; Significance: 1e-108; HSPs: 85)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 73 - 341
Target Start/End: Complemental strand, 1606440 - 1606172
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 171  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || ||| |          |||||||||||||||||||||||||||||||    
T  1606440 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gattcgtttttttttctccttcagtgaaagaatatttgcatcaaaa 1606342  T
Q  172 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatata 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||| |||||    
T  1606341 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaatatata 1606242  T
Q  272 tttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1606241 tttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 1606172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 73 - 341
Target Start/End: Complemental strand, 18345507 - 18345238
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 170  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||           ||||||||||||||||||||||||||||||    
T  18345507 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gatacgttttttttttctccttcagtgaaagaatatttgcatcaaa 18345409  T
Q  171 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatat 270  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  18345408 aatataatattccatttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtcaataaatatatttttagcacaaaatat 18345309  T
Q  271 atttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  18345308 atttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaac 18345238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 73 - 341
Target Start/End: Complemental strand, 11757194 - 11756926
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 171  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||          |||||||||||||||||||||||||||||||    
T  11757194 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gatacgtttttttttctccttcagtgaaagaatatttgcatcaaaa 11757096  T
Q  172 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatata 271  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  11757095 atataatattccctttcaaaatatatttgcatcaaatagttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatata 11756996  T
Q  272 tttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  11756995 tttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaac 11756926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 73 - 341
Target Start/End: Complemental strand, 1849935 - 1849666
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 170  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || ||| |           |||||||||||||||||||| |||||||||    
T  1849935 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gattcgttttttttttctccttcagtgaaagaatatctgcatcaaa 1849837  T
Q  171 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatat 270  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  1849836 aatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatat 1849737  T
Q  271 atttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1849736 atttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 1849666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 73 - 341
Target Start/End: Complemental strand, 20299424 - 20299156
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 171  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||| || |||||          |||||||||||||||||||||||||||||||    
T  20299424 tatatttatagtaaaagtataactcataaatatggaacaaataccacactgaa-gatacgtttttttttctccttcagtgaaagaatatttgcatcaaaa 20299326  T
Q  172 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatata 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  20299325 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatata 20299226  T
Q  272 tttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  20299225 tttgaaataaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaac 20299156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 341
Target Start/End: Complemental strand, 3035758 - 3035416
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc----aaggtttagt---attcaaggtctatatttatatatttatagtaaaagtata 93  Q
    |||||||||||||||||||||||||||||||||||||| |||||    || ||||||    || |||||||||||||||||        |||||||||||    
T  3035758 ttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttata--------gtaaaagtata 3035667  T
Q  94 actcataaatttggaacagataccacactaaaagatacnnnnnnnnnct----ccttcagtgaaagaatatttgcatcaaaaatataatattccctttca 189  Q
    |||||||||||||||||| |||||| ||| || |||||         ||    |||||||||||||||||||||||||||||||||||||||||||||||    
T  3035666 actcataaatttggaacaaataccatactgaa-gatacgttttttttctttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttca 3035568  T
Q  190 aaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatctttta 289  Q
    |||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  3035567 aaatatatttgcatcaaatcattcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatctttta 3035468  T
Q  290 tatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  3035467 tatttttagcaacaatattctccatccatcaaattttgagtcatactacaac 3035416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 73 - 341
Target Start/End: Complemental strand, 28485532 - 28485262
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn---ctccttcagtgaaagaatatttgcatcaa 169  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||            ||||||| |||||||||||||||||||||    
T  28485532 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gatacgtgttttttttcctccttcggtgaaagaatatttgcatcaa 28485434  T
Q  170 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaata 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||    
T  28485433 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaata 28485334  T
Q  270 tatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  28485333 tatttgaaacaaatattttatatttttagcaacaatattcttcatccatcaaattttgaatcatactacaac 28485262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 341
Target Start/End: Original strand, 31156163 - 31156499
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactc 97  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||      || |||| ||||||||||||        ||||||||||| |||    
T  31156163 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgccttgatacaagctctatatttata--------gtaaaagtatagctc 31156254  T
Q  98 ataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatat 195  Q
    |||||||||||||| |||||||||| || ||| |           |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31156255 ataaatttggaacaaataccacactgaa-gattcgttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatat 31156353  T
Q  196 atttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttt 295  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  31156354 atttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttt 31156453  T
Q  296 tagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||| | |||||||| |||||||||||||||||||    
T  31156454 tagcaacaatattctccatccatcaatttttgagtcatactacaac 31156499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 73 - 341
Target Start/End: Complemental strand, 38396256 - 38395987
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 170  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||  || |||||           ||||||||||||||||||||||||||||||    
T  38396256 tatatttatagtaaaagtataactcataaatttggaacaaataccacaccgaa-gatacgttttttttttctccttcagtgaaagaatatttgcatcaaa 38396158  T
Q  171 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatat 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||| ||||||||||||    
T  38396157 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtacataaatatattttcagcacaaaatat 38396058  T
Q  271 atttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||    
T  38396057 atttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttggagtcatactacaac 38395987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 1 - 341
Target Start/End: Original strand, 37412380 - 37412715
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactc 97  Q
    ||||||||||| |||||||||||||||||||||||||  ||||| ||||||| |   ||||||||||||||||||||        |||||| ||||||||    
T  37412380 ttgttgttgccattctaaacccttgtttcagccccctatatctccaggtttactctgattcaaggtctatatttata--------gtaaaaatataactc 37412471  T
Q  98 ataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatata 196  Q
    |||||||||||||  ||| |||||| || |||||          ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  37412472 ataaatttggaacgaataacacactgaa-gatacgtttttttttctccttcagtggaagaatatttgcatcaaaaatataatattccctttcaaaatata 37412570  T
Q  197 tttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatattttt 296  Q
    ||||||||||||| ||||||||||| |||| || | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37412571 tttgcatcaaatcattcttcatacgttacataattatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttt 37412670  T
Q  297 agcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||||||||| | ||||||||||||||||||||||||||||    
T  37412671 agcaacaatattctccatccatcaaattttgagtcatactacaac 37412715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 1 - 341
Target Start/End: Original strand, 42331251 - 42331592
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactc 97  Q
    ||||||||| | |||||||||||||||||||||||||| ||||||| |||||||   || ||| |||||||||||||        |||||||||||||||    
T  42331251 ttgttgttgtcattctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaagtctatatttata--------gtaaaagtataactc 42331342  T
Q  98 ataaatttggaacagataccacactaaaagatacnnnnnnnnn-------ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaa 190  Q
    |||||||||||||  ||||||||||||| |||||                |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  42331343 ataaatttggaacgaataccacactaaa-gatacgtttttttttttctttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaa 42331441  T
Q  191 aatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttat 290  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  42331442 aatatatttgcatcaaatcgttcttcatacggtacaaaaatatacttattgtccataaatatattttcagcacaaaatatatttaaaacaaatcttttat 42331541  T
Q  291 atttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||||||||||||||||| | ||||||||||| ||||||||||||||    
T  42331542 atttttagcaacaatattcttcattcatcaaattttaagtcatactacaac 42331592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 73 - 341
Target Start/End: Original strand, 7092498 - 7092767
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 170  Q
    |||||||||||||||  |||||||||||||||||||||  |||||||||| || |||||           ||||||||||||||||||||||||||||||    
T  7092498 tatatttatagtaaacatataactcataaatttggaacgaataccacactgaa-gatacaattttttttcctccttcagtgaaagaatatttgcatcaaa 7092596  T
Q  171 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatat 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| || ||||||||||||    
T  7092597 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatcttcagcacaaaatat 7092696  T
Q  271 atttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  7092697 atttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaac 7092767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 73 - 341
Target Start/End: Original strand, 21470614 - 21470882
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 171  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||  || |||||          |||||||||||||||||||||||||||||||    
T  21470614 tatatttatagtaaaagtataactcataaatttggaacaaataccacaccgaa-gatacgtttttttttctccttcagtgaaagaatatttgcatcaaaa 21470712  T
Q  172 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatata 271  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||| ||||||||||||||||||||||||| |||||||||||||    
T  21470713 atataatattccctttcaaaatatattcgcatcaaatcgttcttcatacgatataaaaatatatttattgtccataaatatattttcagcacaaaatata 21470812  T
Q  272 tttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||| ||||||||    
T  21470813 tttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttggagtcaaactacaac 21470882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 1 - 341
Target Start/End: Original strand, 7472232 - 7472573
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc----aaggtttagt---attcaaggtctatatttatatatttatagtaaaagtata 93  Q
    |||||||||| ||||||||||||||||||||||||||| |||||    || |||||||   || |||||||||||||||||        |||||  ||||    
T  7472232 ttgttgttgcttttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttata--------gtaaacatata 7472323  T
Q  94 actcataaatttggaacagataccacactaaaagatacnnnnnnnnn---ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaa 190  Q
    |||||||||||||||||| |||||||||| || |||||            |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  7472324 actcataaatttggaacaaataccacactgaa-gatacgtttttttttttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaa 7472422  T
Q  191 aatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttat 290  Q
    ||||||||||||||||||||||||||||| | ||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  7472423 aatatatttgcatcaaatcgttcttcatatgatacaataatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttat 7472522  T
Q  291 atttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  7472523 atttttagcaacaatattctccatccatcaaattttgagtcatactacaac 7472573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 1 - 341
Target Start/End: Complemental strand, 21990187 - 21989854
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactc 97  Q
    ||||||||| | ||||||||||||||||||||||| || ||||| ||||||| |   ||||||||||||||||||||        |||||| ||||||||    
T  21990187 ttgttgttgtcattctaaacccttgtttcagcccc-tctatctccaggtttactctgattcaaggtctatatttata--------gtaaaattataactc 21990097  T
Q  98 ataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatat 195  Q
    |||||||||||||  ||||||||| | |||||||           |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21990096 ataaatttggaacgaataccacac-agaagatacgtttttttttcctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatat 21989998  T
Q  196 atttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttt 295  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |  ||| ||||||||||||||||||||||||||||||    
T  21989997 atttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttca--acacaatatatttgaaacaaatcttttatatttt 21989900  T
Q  296 tagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||| | |||||||||||||| |||||||||||||    
T  21989899 tagcaacaatattctccatccatcaaattttgggtcatactacaac 21989854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 1 - 341
Target Start/End: Complemental strand, 38394023 - 38393684
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc----aaggtttagt---attcaaggtctatatttatatatttatagtaaaagtata 93  Q
    |||||||||||||||||||||||||||||||||||||| |||||    || ||||||    || |||||||||||||||||        |||||||||||    
T  38394023 ttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttata--------gtaaaagtata 38393932  T
Q  94 actcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 192  Q
    |||||||||||||||||| |||||||||| || |||||          | ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  38393931 actcataaatttggaacaaataccacactgaa-gatacgttattttttcaccttcagtgaaagaatatttgcatcaaaaatataacattccctttcaaaa 38393833  T
Q  193 tatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatat 292  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||    
T  38393832 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaataaattttcagcacaaaatatatttgaaacaaatcttatatat 38393733  T
Q  293 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||||||||||||| | |||||||||||| || ||||||||||||    
T  38393732 ttttagcaacaatattctccatccatcaaatttagaatcatactacaac 38393684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 73 - 341
Target Start/End: Complemental strand, 28487519 - 28487250
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 170  Q
    ||||||||||| ||||||||||||||||||||| ||||| |||||||||| || |||||           ||||||||||||||||||||||||||||||    
T  28487519 tatatttataggaaaagtataactcataaatttagaacaaataccacactgaa-gatacgttttttttttctccttcagtgaaagaatatttgcatcaaa 28487421  T
Q  171 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatat 270  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| | ||||||||||||||||||||||||| ||||||||||||    
T  28487420 aatataatattccctttcaaaatatatttgcatcaaatcattcttcatacgatacaaaattatatttattgtccataaatatattttcagcacaaaatat 28487321  T
Q  271 atttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  28487320 atttgaagcaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaac 28487250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 142 - 341
Target Start/End: Complemental strand, 47865528 - 47865329
Alignment:
Q  142 tccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattg 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  47865528 tccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattg 47865429  T
Q  242 tccataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||    
T  47865428 tccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttggagtcatactacaac 47865329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 73 - 341
Target Start/End: Original strand, 7351977 - 7352245
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 171  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||| || |||||          ||| |||||||||||||||||||| ||||||    
T  7351977 tatatttatagtaaaagtataactcataaatttggaacaaatatcacactgaa-gatacgtttttttttctcattcagtgaaagaatatttgcctcaaaa 7352075  T
Q  172 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatata 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||| ||||||| |||||    
T  7352076 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatgcgatacaaaaatatatttattgtccataaatatattttcagcacaatatata 7352175  T
Q  272 tttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||    
T  7352176 tttgaaacaaatcttttatatttttagcaacaatattctccatccatcaatttttgagtcatactacaac 7352245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 141 - 341
Target Start/End: Original strand, 7094814 - 7095014
Alignment:
Q  141 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttatt 240  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  7094814 ctccttcagtgaaagaatatttgcataaaaaatataatatttcctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttatt 7094913  T
Q  241 gtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 340  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  7094914 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 7095013  T
Q  341 c 341  Q
    |    
T  7095014 c 7095014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 337
Target Start/End: Complemental strand, 20626075 - 20625739
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc----aaggtttagt---attcaaggtctatatttatatatttatagtaaaagtata 93  Q
    |||||||||||||||||||||||||||||||||||||| |||||    || |||||||   ||  ||||||||||||||||         ||||  ||||    
T  20626075 ttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatagaaggtctatatttataa--------taaacatata 20625984  T
Q  94 actcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaa 191  Q
    |||||||||||||||||  |||||||||| || |||||           |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20625983 actcataaatttggaacgaataccacactgaa-gatacgtttttttttgctccttcagtgaaaaaatatttgcatcaaaaatataatattccctttcaaa 20625885  T
Q  192 atatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttata 291  Q
    ||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20625884 atatatttgtatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttata 20625785  T
Q  292 tttttagcaacaatattcttcttccatcaaattttgagtcatacta 337  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||    
T  20625784 tttttagcaacaatattctccatccatcaaattttgagtcatacta 20625739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 337
Target Start/End: Complemental strand, 20629966 - 20629630
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc----aaggtttagt---attcaaggtctatatttatatatttatagtaaaagtata 93  Q
    |||||||||||||||||||||||||||||||||||||| |||||    || |||||||   ||  ||||||||||||||||         ||||  ||||    
T  20629966 ttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatagaaggtctatatttataa--------taaacatata 20629875  T
Q  94 actcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaa 191  Q
    |||||||||||||||||  |||||||||| || |||||           |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20629874 actcataaatttggaacgaataccacactgaa-gatacgtttttttttgctccttcagtgaaaaaatatttgcatcaaaaatataatattccctttcaaa 20629776  T
Q  192 atatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttata 291  Q
    ||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20629775 atatatttgtatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttata 20629676  T
Q  292 tttttagcaacaatattcttcttccatcaaattttgagtcatacta 337  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||    
T  20629675 tttttagcaacaatattctccatccatcaaattttgagtcatacta 20629630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 337
Target Start/End: Complemental strand, 20642385 - 20642049
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc----aaggtttagt---attcaaggtctatatttatatatttatagtaaaagtata 93  Q
    |||||||||||||||||||||||||||||||||||||| |||||    || |||||||   ||  ||||||||||||||||         ||||  ||||    
T  20642385 ttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatagaaggtctatatttataa--------taaacatata 20642294  T
Q  94 actcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaa 191  Q
    |||||||||||||||||  |||||||||| || |||||           |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20642293 actcataaatttggaacgaataccacactgaa-gatacgtttttttttgctccttcagtgaaaaaatatttgcatcaaaaatataatattccctttcaaa 20642195  T
Q  192 atatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttata 291  Q
    ||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20642194 atatatttgtatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttata 20642095  T
Q  292 tttttagcaacaatattcttcttccatcaaattttgagtcatacta 337  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||    
T  20642094 tttttagcaacaatattctccatccatcaaattttgagtcatacta 20642049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 73 - 341
Target Start/End: Original strand, 7349598 - 7349866
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 171  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||| || |||||          ||| |||||||||||||||||||| ||||||    
T  7349598 tatatttatagtaaaagtataactcataaatttggaacaaatatcacactgaa-gatacgtttttttttctcattcagtgaaagaatatttgcctcaaaa 7349696  T
Q  172 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatata 271  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||| ||||||| |||||    
T  7349697 atataatattctctttcaaaatatatttgcatcaaatcgttcttcatgcgatacaaaaatatatttattgtccataaatatattttcagcacaatatata 7349796  T
Q  272 tttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||    
T  7349797 tttgaaacaaatcttttatatttttagcaacaatattctccatccatcaatttttgagtcatactacaac 7349866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 141 - 341
Target Start/End: Original strand, 7470420 - 7470620
Alignment:
Q  141 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttatt 240  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  7470420 ctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttatt 7470519  T
Q  241 gtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 340  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||| | |||||||||||||||||||||||||||    
T  7470520 gtccataaatatattttcagcacaaaatatatttgaaacaaatgttttatatttttagcaataatattctccatccatcaaattttgagtcatactacaa 7470619  T
Q  341 c 341  Q
    |    
T  7470620 c 7470620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 141 - 334
Target Start/End: Complemental strand, 24258358 - 24258166
Alignment:
Q  141 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttatt 240  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||| ||||||||    
T  24258358 ctccttcagtgaaagaatatttacatcaaaaatataatattccctttcaaaatatatttgcatcaa-tcgtccttcatactgtacaaaaatatatttatt 24258260  T
Q  241 gtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcata 334  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24258259 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcata 24258166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 13099728 - 13099996
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactc 97  Q
    ||||||||||| |||||||||||||||||| ||||||| ||||||||||||| |   ||||||||||||||||||||        |||||||||||||||    
T  13099728 ttgttgttgccattctaaacccttgtttcaaccccctctatctcaaggtttactttgattcaaggtctatatttata--------gtaaaagtataactc 13099819  T
Q  98 ataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatat 195  Q
    |||||||||||||  |||||||||| || |||||           |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13099820 ataaatttggaacgaataccacactgaa-gatacgttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatat 13099918  T
Q  196 atttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatt 273  Q
    ||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||    
T  13099919 atttgtatcaaatcgttcttcatacggtacgaaaatatatttattgtccataaatatattttcagcacaaaatatatt 13099996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 194 - 341
Target Start/End: Complemental strand, 443474 - 443327
Alignment:
Q  194 atatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatatt 293  Q
    ||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  443474 atatttgcatcaaattgttcttcagacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatt 443375  T
Q  294 tttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||    
T  443374 tttagcaacaatattctccatccatcaaattttgagtcatactacaac 443327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 141 - 341
Target Start/End: Complemental strand, 3677179 - 3676998
Alignment:
Q  141 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttatt 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                 
T  3677179 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaa------------- 3677093  T
Q  241 gtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 340  Q
          ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||    
T  3677092 ------aaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatctatcaaattttgagtcatactacaa 3676999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 73 - 262
Target Start/End: Original strand, 43253843 - 43254035
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn----ctccttcagtgaaagaatatttgcatca 168  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||  || |||||             ||||||||||||||||||||||||||||    
T  43253843 tatatttatagtaaaagtataactcataaatttggaacaaataccacaccgaa-gatactttcttattttttctccttcagtgaaagaatatttgcatca 43253941  T
Q  169 aaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagca 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  43253942 aaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatttttagca 43254035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 74 - 238
Target Start/End: Complemental strand, 20297327 - 20297163
Alignment:
Q  74 atatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaa 172  Q
    |||||| ||||||||||||||||| ||||||||||||| |||||||||| || |||||          ||||||| ||||||||||||||||||||||||    
T  20297327 atatttttagtaaaagtataactcgtaaatttggaacaaataccacactgaa-gatacgtttttttttctccttcggtgaaagaatatttgcatcaaaaa 20297229  T
Q  173 tataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttattta 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  20297228 tataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatattta 20297163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 176 - 339
Target Start/End: Original strand, 40281824 - 40281989
Alignment:
Q  176 aatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttg 275  Q
    |||||||| ||| |||||||||  | |||||||  |  |||||||||||||||||| |||||||| |||||||||||||||| | |||||||||||||||    
T  40281824 aatattccttttaaaaatatatccgtatcaaatattctttcatacggtacaaaaatatatttattttccataaatatattttcaacacaaaatatatttg 40281923  T
Q  276 aaacaaatcttttatatttttagcaacaa--tattcttcttccatcaaattttgagtcatactaca 339  Q
    |||||||| ||||||||||||||||||||  | |||||| ||||||||||||||||||||||||||    
T  40281924 aaacaaatattttatatttttagcaacaaattcttcttcatccatcaaattttgagtcatactaca 40281989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 176 - 332
Target Start/End: Complemental strand, 10690845 - 10690684
Alignment:
Q  176 aatattccctttcaaaatatatttgcatcaaatcgttct-tcatacggtacaaaaatttatttattgtccataaatat--attttt----agcacaaaat 268  Q
    |||||||| ||| ||||||||||||||||||||  |||| ||| | ||||||||||| |||||||||| |||||  |   ||||||    ||||||||||    
T  10690845 aatattccttttaaaaatatatttgcatcaaata-ttctgtcacatggtacaaaaatatatttattgtacataagcaacaattttttgaaagcacaaaat 10690747  T
Q  269 atatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 332  Q
    |||||||||||| | |||||||||||||||||||||| |||| | |||||||||||||||||||    
T  10690746 atatttgaaacata-cttttatatttttagcaacaatcttctccctccatcaaattttgagtca 10690684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 11355295 - 11355244
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  11355295 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggttta 11355244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 20137361 - 20137412
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  20137361 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggttta 20137412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 21680064 - 21680013
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  21680064 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggttta 21680013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 27306481 - 27306557
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 74  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||| |   || |||||||||||||||||    
T  27306481 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttata 27306557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 279 - 332
Target Start/End: Complemental strand, 20297161 - 20297108
Alignment:
Q  279 caaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 332  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  20297161 caaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 20297108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 26804606 - 26804534
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagtattcaaggtctatatttata 74  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||| |   |||||||||||||||||    
T  26804606 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttact-cacaaggtctatatttata 26804534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 21678099 - 21678052
Alignment:
Q  5 tgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  21678099 tgttgcctttctaaacccttgtttcagccccctctatctcaaggttta 21678052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 22828885 - 22828936
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  22828885 ttgttgttgcctttctaaactcttgtttcagccccctctatctcaaggttta 22828936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 24258500 - 24258449
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  24258500 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaatgttta 24258449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 39146239 - 39146290
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  39146239 ttgttgttgtctatctaaacccttgtttcagccccctccatctcaaggttta 39146290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 44601 - 44551
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  44601 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagttt 44551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 1049547 - 1049597
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  1049547 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagttt 1049597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 325
Target Start/End: Original strand, 12310542 - 12310608
Alignment:
Q  259 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattt 325  Q
    ||||||||||||||||||||||||||||||||||   |||||||||| |||||| ||||| ||||||    
T  12310542 agcacaaaatatatttgaaacaaatcttttatatcagtagcaacaatcttcttcatccattaaattt 12310608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 443632 - 443528
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactc 97  Q
    ||||||||||| ||||||||| |||||| ||| ||||| ||||||||||||| |   |||||| |||||||||||||        |||||||||||||||    
T  443632 ttgttgttgccattctaaaccattgttttagctccctctatctcaaggtttactctgattcaaagtctatatttata--------gtaaaagtataactc 443541  T
Q  98 ataaatttggaac 110  Q
    |||||||||||||    
T  443540 ataaatttggaac 443528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 7470274 - 7470394
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctcca----tctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtata 93  Q
    |||||||||||||||||||||||||||||||||||||| |    |||||| |||||||   || |||||||        |||||||||||||||  ||||    
T  7470274 ttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc--------tatatttatagtaaacatata 7470365  T
Q  94 actcataaatttggaacagataccacact 122  Q
    |||||||||||||||||  ||||||||||    
T  7470366 actcataaatttggaacgaataccacact 7470394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 4296187 - 4296238
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||| | |||||||||||||||||||||||||| |||||||||||||    
T  4296187 ttgttgttgtcattctaaacccttgtttcagccccctctatctcaaggttta 4296238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 18567650 - 18567599
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| |||||    
T  18567650 ttgttgttgcctttctaaacccttgtttcagccccttctatctcaaagttta 18567599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 31435299 - 31435350
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| |||||    
T  31435299 ttgttgttgcctttctaaacccttgtttcagccccttctatctcaaagttta 31435350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 38396353 - 38396310
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  38396353 ttgttgttgcctttctaaacccttgtttcagccccctccctctc 38396310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 44724616 - 44724565
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  44724616 ttgttgttgcctttctaaacccttgtttcagccccctatatctccaggttta 44724565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 48457690 - 48457647
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  48457690 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 48457647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 12310442 - 12310528
Alignment:
Q  176 aatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagca 262  Q
    |||||||| ||| ||||||||||| ||||||||| | ||||||||||||||||||| |||| | ||||| ||| |||| ||| ||||    
T  12310442 aatattccttttaaaaatatatttacatcaaatcttccttcatacggtacaaaaatatattaactgtccttaagtataatttcagca 12310528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 22251794 - 22251870
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 74  Q
    |||||||||||||||||||| |||||||||||| |||| ||||||| ||||| |   ||||||||| ||||||||||    
T  22251794 ttgttgttgcctttctaaactcttgtttcagcctcctctatctcaaagtttactctgattcaaggtttatatttata 22251870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 7351904 - 7351941
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctc 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7351904 ttgttgttgcctttctaaacccttgtttcagccccctc 7351941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 40946365 - 40946328
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctc 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  40946365 ttgttgttgcctttctaaacccttgtttcagccccctc 40946328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 1850015 - 1849975
Alignment:
Q  4 ttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  1850015 ttgttgcctttctaaacccttgtttcagccccctctatctc 1849975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 24465575 - 24465535
Alignment:
Q  12 tttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  24465575 tttctaaacccttgtttcagccccctctatctcaaggttta 24465535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 3878614 - 3878571
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    ||||||||| |||||||||||||||||||||||||||| |||||    
T  3878614 ttgttgttgtctttctaaacccttgtttcagccccctctatctc 3878571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 7092427 - 7092470
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    ||||||||| | ||||||||||||||||||||||||||||||||    
T  7092427 ttgttgttgtcattctaaacccttgtttcagccccctccatctc 7092470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 52
Target Start/End: Complemental strand, 7188568 - 7188529
Alignment:
Q  13 ttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  7188568 ttctaaacccttgtttcagccccctctatctcaaggttta 7188529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 21592395 - 21592446
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||| |||||||||| |||||||||||||||| ||||||| |||||    
T  21592395 ttgttgttgcatttctaaacctttgtttcagccccctctatctcaaagttta 21592446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 40836994 - 40837037
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||| ||||||||||||| |||||    
T  40836994 ttgttgttgcctttctaaacccttctttcagccccctcaatctc 40837037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 35666 - 35616
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    ||||||||| |||||| ||||||||||||||||||||| ||||||| ||||    
T  35666 ttgttgttgtctttctgaacccttgtttcagccccctctatctcaaagttt 35616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 334
Target Start/End: Original strand, 43254023 - 43254069
Alignment:
Q  288 tatatttttagcaacaatattcttcttccatcaaattttgagtcata 334  Q
    ||||||||||||||||||||||| | |||||||||||||||| ||||    
T  43254023 tatatttttagcaacaatattctccatccatcaaattttgagacata 43254069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 7094674 - 7094711
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctc 38  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  7094674 ttgttgttgccattctaaacccttgtttcagccccctc 7094711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 7349525 - 7349562
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctc 38  Q
    |||||||||||||||||||||| |||||||||||||||    
T  7349525 ttgttgttgcctttctaaacccctgtttcagccccctc 7349562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 18345578 - 18345541
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctc 38  Q
    |||||||||||||||||||||||||||||| |||||||    
T  18345578 ttgttgttgcctttctaaacccttgtttcaaccccctc 18345541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 28487590 - 28487553
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctc 38  Q
    |||||||| |||||||||||||||||||||||||||||    
T  28487590 ttgttgttacctttctaaacccttgtttcagccccctc 28487553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1047176 - 1047219
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||| ||||||||||| ||||||||||||||| |||||    
T  1047176 ttgttgttgcttttctaaacccctgtttcagccccctctatctc 1047219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 295
Target Start/End: Complemental strand, 6628884 - 6628853
Alignment:
Q  264 aaaatatatttgaaacaaatcttttatatttt 295  Q
    ||||||||||||||||||||||||||||||||    
T  6628884 aaaatatatttgaaacaaatcttttatatttt 6628853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 9680856 - 9680813
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    ||||||||||| |||||||||||||||||| ||||||| |||||    
T  9680856 ttgttgttgcccttctaaacccttgtttcaaccccctctatctc 9680813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 295
Target Start/End: Original strand, 12657667 - 12657698
Alignment:
Q  264 aaaatatatttgaaacaaatcttttatatttt 295  Q
    ||||||||||||||||||||||||||||||||    
T  12657667 aaaatatatttgaaacaaatcttttatatttt 12657698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 22392495 - 22392434
Alignment:
Q  16 taaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 74  Q
    ||||||||||||||||||||||| ||||||| ||||| |   || |||||||||||||||||    
T  22392495 taaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttata 22392434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Original strand, 12485044 - 12485074
Alignment:
Q  265 aaatatatttgaaacaaatcttttatatttt 295  Q
    |||||||||||||||||||||||||||||||    
T  12485044 aaatatatttgaaacaaatcttttatatttt 12485074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Original strand, 12506475 - 12506505
Alignment:
Q  265 aaatatatttgaaacaaatcttttatatttt 295  Q
    |||||||||||||||||||||||||||||||    
T  12506475 aaatatatttgaaacaaatcttttatatttt 12506505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 20297396 - 20297362
Alignment:
Q  4 ttgttgcctttctaaacccttgtttcagccccctc 38  Q
    |||||||| ||||||||||||||||||||||||||    
T  20297396 ttgttgccattctaaacccttgtttcagccccctc 20297362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 24748628 - 24748594
Alignment:
Q  4 ttgttgcctttctaaacccttgtttcagccccctc 38  Q
    |||||| ||||||||||||||||||||||||||||    
T  24748628 ttgttgtctttctaaacccttgtttcagccccctc 24748594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 28485603 - 28485569
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagcccc 35  Q
    |||||||||||||||||||||||||||||| ||||    
T  28485603 ttgttgttgcctttctaaacccttgtttcaacccc 28485569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 170
Target Start/End: Complemental strand, 443490 - 443461
Alignment:
Q  141 ctccttcagtgaaagaatatttgcatcaaa 170  Q
    ||||||||||||||||||||||||||||||    
T  443490 ctccttcagtgaaagaatatttgcatcaaa 443461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 3677250 - 3677201
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacact 122  Q
    ||||||||||||||||  ||||||||||||||||||||  ||| ||||||    
T  3677250 tatatttatagtaaaaacataactcataaatttggaacgaatatcacact 3677201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 7094745 - 7094794
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacact 122  Q
    |||||||||| ||||  |||||||||||||||||||||  ||||||||||    
T  7094745 tatatttataataaacatataactcataaatttggaacgaataccacact 7094794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 42223194 - 42223142
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccc-cctccatctcaaggttta 52  Q
    ||||||||||| |||||||||||||||||| ||| | || |||||||||||||    
T  42223194 ttgttgttgccattctaaacccttgtttcatcccacatctatctcaaggttta 42223142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 197; Significance: 1e-107; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 73 - 341
Target Start/End: Original strand, 2629209 - 2629478
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 170  Q
    |||||||||||||||||||||||| |||||||||||||| |||| ||||| || |||||           ||||||||||||||||||||||||||||||    
T  2629209 tatatttatagtaaaagtataactaataaatttggaacaaatactacactgaa-gatacgtttttttttcctccttcagtgaaagaatatttgcatcaaa 2629307  T
Q  171 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatat 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  2629308 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatat 2629407  T
Q  271 atttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2629408 atttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 2629478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 341
Target Start/End: Original strand, 12195767 - 12196103
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactc 97  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||| ||||  |   || |||||||||||||||||        |||||||||||||||    
T  12195767 ttgttgttgcttttctaaacccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttata--------gtaaaagtataactc 12195858  T
Q  98 ataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatat 195  Q
    |||||||||||||| |||||||||| || ||| |           |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12195859 ataaatttggaacaaataccacactgaa-gattcgttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatat 12195957  T
Q  196 atttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttt 295  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  12195958 atttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttt 12196057  T
Q  296 tagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||| | |||||||| |||||||||||||||||||    
T  12196058 tagcaacaatattctccatccatcaatttttgagtcatactacaac 12196103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 73 - 341
Target Start/End: Complemental strand, 18318021 - 18317752
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 170  Q
    |||||||||||| |||||||||||||||||||||||||  |||||||||| || |||||           |||||||||||||||||||||||||| |||    
T  18318021 tatatttatagtgaaagtataactcataaatttggaacgaataccacactgaa-gatacgttttttttttctccttcagtgaaagaatatttgcataaaa 18317923  T
Q  171 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatat 270  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  18317922 aatataatattccctttcaaaatatatttgcatcaaatcttccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatat 18317823  T
Q  271 atttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18317822 atttgaaacaaatcttttatatttttagcaacaatattcttcttccttcaaattttgagtcatactacaac 18317752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 73 - 341
Target Start/End: Original strand, 30034926 - 30035195
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 170  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||| | || |||||           |||||||||||||||||||| |||||||||    
T  30034926 tatatttatagtaaaagtataactcataaatttggaacaaatatcacattgaa-gatacgtttttattttctccttcagtgaaagaatatctgcatcaaa 30035024  T
Q  171 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatat 270  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  30035025 aatataatattccctttcaaaatatatttgcattaaatcgttcttcatacgatacaaaaatatatttattgtctataaatatatttttagcacaaaatat 30035124  T
Q  271 atttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  30035125 atttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaac 30035195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 1 - 341
Target Start/End: Complemental strand, 30967263 - 30966924
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc----aaggtttag--tattcaaggtctatatttatatatttatagtaaaagtataa 94  Q
    ||||||||| |||||||||||||||||||||||||||| |||||    || ||||||  ||| |||||||||||||||||        ||||||||||||    
T  30967263 ttgttgttgtctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctatacaaggtctatatttata--------gtaaaagtataa 30967172  T
Q  95 ctcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 192  Q
    ||||||||||||||||| |||||||||| || ||| |           |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  30967171 ctcataaatttggaacaaataccacactgaa-gattcgttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattcgctttcaaaa 30967073  T
Q  193 tatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatat 292  Q
    ||||||||||| ||||||||||||||||  ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  30967072 tatatttgcattaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaataaatcttttatat 30966973  T
Q  293 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||||||||||||| | |||||||||||| |||||||||||||||    
T  30966972 ttttagcaacaatattctccatccatcaaatttggagtcatactacaac 30966924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 141 - 341
Target Start/End: Original strand, 5275727 - 5275927
Alignment:
Q  141 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttatt 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  5275727 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttatt 5275826  T
Q  241 gtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 340  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  5275827 gtccataaatatattttcagcacaaaatatatttgaaataaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 5275926  T
Q  341 c 341  Q
    |    
T  5275927 c 5275927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 141 - 341
Target Start/End: Original strand, 19704964 - 19705164
Alignment:
Q  141 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttatt 240  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||    
T  19704964 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttatt 19705063  T
Q  241 gtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 340  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19705064 gtccataaatatattttcagcacaaaatatctttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 19705163  T
Q  341 c 341  Q
    |    
T  19705164 c 19705164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 73 - 341
Target Start/End: Original strand, 26932889 - 26933157
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 171  Q
    |||||||||||| |||||||||| ||||||||||||||| |||||||||| || ||| |          |||||||||||||||||||||||||||||||    
T  26932889 tatatttatagtgaaagtataacccataaatttggaacaaataccacactgaa-gattcgtttttttttctccttcagtgaaagaatatttgcatcaaaa 26932987  T
Q  172 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatata 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||  ||||||| ||||||| |||||    
T  26932988 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataataatattttcagcacaatatata 26933087  T
Q  272 tttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||    
T  26933088 tttgaaacaaatcttttatatttttagcaacaatattctccatccatcaatttttgagtcatactacaac 26933157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 334
Target Start/End: Complemental strand, 17852604 - 17852275
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactc 97  Q
    ||||||||| | |||||||||||||||||||||||||| ||||||||||||| |   |||||| |||||||||||||        |||||||||||||||    
T  17852604 ttgttgttgtcattctaaacccttgtttcagccccctctatctcaaggtttactctgattcaaagtctatatttata--------gtaaaagtataactc 17852513  T
Q  98 ataaatttggaacagataccacactaaaagatacnnnnnnnnn----ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaat 193  Q
    |||||||||||||  ||||||||| ||  |||||             ||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  17852512 ataaatttggaacgaataccacacgaa--gatacttttttttttcttctctttcagtgaaataatatttgcatcaaaaatataatattccctttcaaaat 17852415  T
Q  194 atatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatatt 293  Q
    ||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||| |||| |||  |||||||||||||||||||||||||    
T  17852414 atatttgcatcaaatagttcttcataaggtacaaaaatatatttattgtccataaatatattttcagcataaa--atatttgaaacaaatcttttatatt 17852317  T
Q  294 tttagca--acaatattcttcttccatcaaattttgagtcata 334  Q
    |||||||  |||||||||| | | |||||||||||||||||||    
T  17852316 tttagcaacacaatattctccat-catcaaattttgagtcata 17852275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 145 - 340
Target Start/End: Complemental strand, 17011973 - 17011781
Alignment:
Q  145 ttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtcc 244  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||    
T  17011973 ttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccatcatacggtacaaaaatatatttattgtcc 17011874  T
Q  245 ataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 340  Q
    |||||||||||||   ||||||  |||||| ||||||| |||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||    
T  17011873 ataaatatattttctacacaaa--atatttaaaacaaa-cttttatatttttagcaataatattcttcatccatcaaattttaagtcatactacaa 17011781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 141 - 341
Target Start/End: Original strand, 22858343 - 22858535
Alignment:
Q  141 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttatt 240  Q
    |||||||| ||||||||||||||||||||||        ||||||||||||||||||||||||| |||| |  |||||||||||||||||| ||||||||    
T  22858343 ctccttcaatgaaagaatatttgcatcaaaa--------ttccctttcaaaatatatttgcatctaatcttctttcatacggtacaaaaatatatttatt 22858434  T
Q  241 gtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 340  Q
    ||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||    
T  22858435 gtccataaatatattttcagcacaaagtatatttaaaacaaatcttttatatttttattaacaatattcttcatccatcaaattttgagtcatactacaa 22858534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 176 - 340
Target Start/End: Complemental strand, 20526708 - 20526548
Alignment:
Q  176 aatattccctttcaaaa-tatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatattt 274  Q
    ||||||| ||||||||| ||||||||||||||||| | ||||||||||||||||||| ||| ||     |||||||||||||| |||| |||||||||||    
T  20526708 aatattctctttcaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatatgta-----cataaatatattttcagcataaaatatattt 20526614  T
Q  275 gaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 340  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  20526613 gaaacaaatcttttatatttttagcaacaatattcttcacccatcaaattttgagtcatactacaa 20526548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 176 - 320
Target Start/End: Complemental strand, 30445404 - 30445243
Alignment:
Q  176 aatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttt-----------------t 258  Q
    |||||||| ||| ||||||||||||||||||||| | ||||||| ||||||||||| |||||||||| ||||||||||||||                      
T  30445404 aatattcctttttaaaatatatttgcatcaaatcttccttcatatggtacaaaaatatatttattgttcataaatatattttcagcaacaatattctgga 30445305  T
Q  259 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatca 320  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||    
T  30445304 agcacaaaatatatttgaaacaaatattttatatttctagcaacaatattcttcatccatca 30445243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 259 - 332
Target Start/End: Complemental strand, 30443097 - 30443022
Alignment:
Q  259 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatc--aaattttgagtca 332  Q
    |||| |||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||  |||||||||||||    
T  30443097 agcaaaaaatatatttgaaacaaatctcttatatttttaacaacaatattcttcatccatcataaattttgagtca 30443022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 24338700 - 24338751
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  24338700 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggttta 24338751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 25477336 - 25477285
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  25477336 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggttta 25477285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 32447568 - 32447619
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  32447568 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggttta 32447619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 15532933 - 15533009
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 74  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||| |||||||   || |||||||||||||||||    
T  15532933 ttgttgttacctttctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttata 15533009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 15541392 - 15541468
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 74  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||| |||||||   || |||||||||||||||||    
T  15541392 ttgtttttgcctttctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttata 15541468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 3390441 - 3390390
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  3390441 ttgttgttgcctttctaaacccttgtttcagccccgtctatctcaaggttta 3390390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 13057256 - 13057205
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  13057256 ttgttcttgcctttctaaacccttgtttcagccccctctatctcaaggttta 13057205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 19704821 - 19704864
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  19704821 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 19704864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 3632190 - 3632241
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||||||| | ||||| |||||||||||||    
T  3632190 ttgttgttgcctttctaaacccttgtttcaactccctctatctcaaggttta 3632241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 4816483 - 4816526
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  4816483 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 4816526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 20915608 - 20915651
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  20915608 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 20915651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28241573 - 28241616
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  28241573 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 28241616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 14459017 - 14459067
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||| ||||    
T  14459017 ttgttgttgcctttctaaacccttatttcagccccctctatctcaaagttt 14459067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 14507427 - 14507477
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  14507427 ttgttgttgcctttctaaacccttgttttagccccctctatctcaaagttt 14507477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 15719705 - 15719665
Alignment:
Q  12 tttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  15719705 tttctaaacccttgtttcagccccctctatctcaaggttta 15719665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 22490702 - 22490650
Alignment:
Q  1 ttgttgttgcctttctaaa-cccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||||||||| ||| ||||||||||||||||||| |||||||||||||    
T  22490702 ttgttgttgcctttcaaaaacccttgtttcagccccctctatctcaaggttta 22490650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 1072129 - 1072180
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||||||||| || || ||||||| |||||    
T  1072129 ttgttgttgcctttctaaacccttgtttcagctccttctatctcaaagttta 1072180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 3233983 - 3234034
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||| ||||||||| |||||||||||||||||| |||| ||||||||    
T  3233983 ttgttgttgtctttctaaatccttgtttcagccccctctatcttaaggttta 3234034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 3630116 - 3630167
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||  ||||||||||||||| |||||||| ||||    
T  3630116 ttgttgttgcctttctaaaccgatgtttcagccccctctatctcaagtttta 3630167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 8995541 - 8995498
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||| ||||||||| |||||    
T  8995541 ttgttgttgcctttctaaacccttgttttagccccctctatctc 8995498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 9019988 - 9019945
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||| ||||||||| |||||    
T  9019988 ttgttgttgcctttctaaacccttgttttagccccctctatctc 9019945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 13039816 - 13039765
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||| ||||||||||||||||||||||||||| |||  |||||||||||||    
T  13039816 ttgttcttgcctttctaaacccttgtttcagcctcctatatctcaaggttta 13039765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 26065048 - 26065005
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    ||||||||||| |||||||||||||||||||||||||| |||||    
T  26065048 ttgttgttgccattctaaacccttgtttcagccccctctatctc 26065005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 26085017 - 26084974
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    ||||||||||| |||||||||||||||||||||||||| |||||    
T  26085017 ttgttgttgccattctaaacccttgtttcagccccctctatctc 26084974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 30729080 - 30729131
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||| ||||| | |||||||||||||||||||| |||||||||||||    
T  30729080 ttgttgttgtctttcgatacccttgtttcagccccctctatctcaaggttta 30729131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 1230501 - 1230551
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    |||||||||||||||||||||||||||||| ||| ||| ||||||| ||||    
T  1230501 ttgttgttgcctttctaaacccttgtttcaaccctctctatctcaaagttt 1230551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 2629137 - 2629171
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagcccc 35  Q
    |||||||||||||||||||||||||||||||||||    
T  2629137 ttgttgttgcctttctaaacccttgtttcagcccc 2629171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13870674 - 13870723
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    |||||||||||||||||||||||| |||||| |||||| ||||||||||||    
T  13870674 ttgttgttgcctttctaaacccttatttcag-cccctctatctcaaggttt 13870723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 19227660 - 19227710
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    |||||||||||||||||||||||||||| ||||||||  ||||||| ||||    
T  19227660 ttgttgttgcctttctaaacccttgtttgagccccctttatctcaaagttt 19227710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 30443195 - 30443116
Alignment:
Q  176 aatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttt 257  Q
    |||||| | ||| |||||| |||||||||||||| | ||| |||||||||||| || ||||  |||||||||||||||||||    
T  30443195 aatatttcttttaaaaatacatttgcatcaaatcttcctttatacggtacaaacatatatt--ttgtccataaatatatttt 30443116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 11983281 - 11983324
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||| || |||||||||||||||| |||||    
T  11983281 ttgttgttgcctttctaagcctttgtttcagccccctctatctc 11983324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 328
Target Start/End: Complemental strand, 12158575 - 12158532
Alignment:
Q  285 ttttatatttttagcaacaatattcttcttccatcaaattttga 328  Q
    ||||||||||||||||||||| |||||| | |||||||||||||    
T  12158575 ttttatatttttagcaacaatcttcttcattcatcaaattttga 12158532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 12161807 - 12161857
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||| |||||||||||||||||||| |||||  |||||||||||||    
T  12161807 ttgttgttgcatttctaaacccttgtttcag-cccctttatctcaaggttta 12161857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 52
Target Start/End: Complemental strand, 15346441 - 15346402
Alignment:
Q  13 ttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||||||| |||||||||||| |||||||||||||    
T  15346441 ttctaaacccttggttcagccccctctatctcaaggttta 15346402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 30034855 - 30034898
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||| ||| ||||| |||||    
T  30034855 ttgttgttgcctttctaaacccttgttttagctccctctatctc 30034898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 32280058 - 32280024
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagcccc 35  Q
    |||||||||||||| ||||||||||||||||||||    
T  32280058 ttgttgttgcctttttaaacccttgtttcagcccc 32280024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 308
Target Start/End: Complemental strand, 3833220 - 3833176
Alignment:
Q  264 aaaatatatttgaaacaaatcttttatatttttagcaacaatatt 308  Q
    ||||||||||| |||||||| |||||| |||||||||| ||||||    
T  3833220 aaaatatatttaaaacaaatattttatgtttttagcaataatatt 3833176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 341
Target Start/End: Original strand, 11725 - 12060
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactc 97  Q
    ||||||||| | ||||||| || ||||||||||||||| ||||| ||||||| |   ||||||||||||||||||||        |||||||||||||||    
T  11725 ttgttgttgtcattctaaatccctgtttcagccccctctatctccaggtttactctgattcaaggtctatatttata--------gtaaaagtataactc 11816  T
Q  98 ataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatata 196  Q
    |||||||||||||  |||||||||| || |||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11817 ataaatttggaacgaataccacactgaa-gatacgtttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatata 11915  T
Q  197 tttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatattttt 296  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  11916 tttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaattttttatattttt 12015  T
Q  297 agcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||||||||| | ||||||||||||||| ||||||||||||    
T  12016 agcaacaatattctccatccatcaaattttgaatcatactacaac 12060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 195; Significance: 1e-106; HSPs: 72)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 73 - 341
Target Start/End: Complemental strand, 18468967 - 18468699
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 171  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||          |||||||||||||||||||||||||||||||    
T  18468967 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gatactttttattttctccttcagtgaaagaatatttgcatcaaaa 18468869  T
Q  172 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatata 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  18468868 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatata 18468769  T
Q  272 tttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||    
T  18468768 tttgaaacaaatcttttatatttttagcaaaaatattctccatccatcaaattttgagtcatactacaac 18468699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 340
Target Start/End: Original strand, 18511464 - 18511800
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc--aaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataac 95  Q
    ||||||||| | |||||||||||||||||||||||||| |||||  || |||||||   || ||||||||||||||||||        ||||  ||||||    
T  18511464 ttgttgttgtcattctaaacccttgtttcagccccctctatctctcaaagtttagtctgatacaaggtctatatttatat--------taaacatataac 18511555  T
Q  96 tcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaata 194  Q
    |||||||||||||||  ||||||||||||| |||||          ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18511556 tcataaatttggaacgaataccacactaaa-gatacgtttttttttctccttcagtgaaagaatatttgcatcaaaaatataatatttcctttcaaaata 18511654  T
Q  195 tatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatattt 294  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  18511655 tatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatattcgaaacaaatcttttatattt 18511754  T
Q  295 ttagcaacaatattcttcttccatcaaattttgagtcatactacaa 340  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  18511755 ttagcaacaatattcttcatccatcaaattttgagtcatactacaa 18511800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 73 - 341
Target Start/End: Complemental strand, 25803976 - 25803708
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 171  Q
    ||||||||||||||||||||||||||||||||||||||| |||  ||||| || |||||          |||||||||||||||||||||||||||||||    
T  25803976 tatatttatagtaaaagtataactcataaatttggaacaaatattacactgaa-gatacgtttttttttctccttcagtgaaagaatatttgcatcaaaa 25803878  T
Q  172 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatata 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  25803877 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatata 25803778  T
Q  272 tttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  25803777 tttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaac 25803708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 73 - 341
Target Start/End: Complemental strand, 27910405 - 27910136
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 170  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||           ||||||||||||||||||||||||||||||    
T  27910405 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gatactttttttttttctccttcagtgaaagaatatttgcatcaaa 27910307  T
Q  171 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatat 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  27910306 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttcagcacaaaatat 27910207  T
Q  271 atttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||    
T  27910206 atttgaaacaaatcttttatatttttagcaataatattctccatccatcaaattttgagtcatactacaac 27910136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 73 - 341
Target Start/End: Complemental strand, 27912490 - 27912220
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn---ctccttcagtgaaagaatatttgcatcaa 169  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||| || |||||            |||||||||||||||||||||||||||||    
T  27912490 tatatttatagtaaaagtataactcataaatttggaacaaatatcacactgaa-gatacgtttttttttttctccttcagtgaaagaatatttgcatcaa 27912392  T
Q  170 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaata 269  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||    
T  27912391 aaatataatattccctttcaaaatatatttgcatcaaatcgtttttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaata 27912292  T
Q  270 tatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  27912291 tatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaac 27912220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 73 - 341
Target Start/End: Original strand, 3373360 - 3373629
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 170  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||           |||||||||||||| |||||||||||||||    
T  3373360 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gatacgttttttttttctccttcagtgaaaaaatatttgcatcaaa 3373458  T
Q  171 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatat 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||| ||||    
T  3373459 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaatatat 3373558  T
Q  271 atttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||    
T  3373559 atttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattctgagtcatactacaac 3373629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 1 - 341
Target Start/End: Complemental strand, 26097760 - 26097422
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactc 97  Q
    ||||||||||| ||||||||| || ||||||||||||| ||||||| ||||| |   ||||||||||||||||||||        |||||||||||||||    
T  26097760 ttgttgttgccattctaaacctttatttcagccccctctatctcaaagtttactctgattcaaggtctatatttata--------gtaaaagtataactc 26097669  T
Q  98 ataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaaaatataatattccctt--tcaaaat 193  Q
    |||||||||||||  |||||||||| || |||||           ||||||||||||||||||||||||||||||||||||| ||| ||||  |||||||    
T  26097668 ataaatttggaacgaataccacactgaa-gatacatttttttttcctccttcagtgaaagaatatttgcatcaaaaatataacatttccttcttcaaaat 26097570  T
Q  194 atatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatatt 293  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||| |||||||||    
T  26097569 atatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagtacaaaatatatttgaaacaaattttttatatt 26097470  T
Q  294 tttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||    
T  26097469 tttagcaacaatattctccatccatcaaattttgagtcatactacaac 26097422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 73 - 341
Target Start/End: Complemental strand, 15552195 - 15551926
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 170  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| || || |||||           ||||||||||||||||||||||||||||||    
T  15552195 tatatttatagtaaaagtataactcataaatttggaacaaataccacgctgaa-gatacgttttttttttctccttcagtgaaagaatatttgcatcaaa 15552097  T
Q  171 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatat 270  Q
    ||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| || ||||||| ||||    
T  15552096 aatgtcatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatcttcagcacaatatat 15551997  T
Q  271 atttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  15551996 atttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaac 15551926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 4 - 341
Target Start/End: Original strand, 26098506 - 26098840
Alignment:
Q  4 ttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactcata 100  Q
    |||||||| |||||||||||| ||||||||||||| ||||| ||||||| |   ||||||||||||||||||||        ||||||||||||||||||    
T  26098506 ttgttgccattctaaacccttatttcagccccctctatctccaggtttactctgattcaaggtctatatttata--------gtaaaagtataactcata 26098597  T
Q  101 aatttggaacagataccacactaaaagatacnnnnnnnnn---ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatat 197  Q
    || |||||||  |||||||| | || |||||            |||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||    
T  26098598 aaattggaacgaataccacattgaa-gatacgtttttttatttctccttcaatgaaagaatttttgtatcaaaaatataatattccctttcaaaatatat 26098696  T
Q  198 ttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatattttta 297  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  26098697 ttgcatcaaatcgttctttatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttta 26098796  T
Q  298 gcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||| |||||||| | ||||||||||||||||||||||||||||    
T  26098797 gcaataatattctccatccatcaaattttgagtcatactacaac 26098840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 73 - 322
Target Start/End: Complemental strand, 10586799 - 10586549
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 170  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||           ||||||||||||||||||||||||||||||    
T  10586799 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gatacgttttttttttctccttcagtgaaagaatatttgcatcaaa 10586701  T
Q  171 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatat 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  10586700 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatat 10586601  T
Q  271 atttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaa 322  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||    
T  10586600 atttgaaacaaatcttttatatttttagcaacaatattccccatccatcaaa 10586549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 141 - 339
Target Start/End: Original strand, 18509706 - 18509904
Alignment:
Q  141 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttatt 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  18509706 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcattcttcatacggtacaaaaatatatttatt 18509805  T
Q  241 gtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactaca 339  Q
    ||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  18509806 gtccataaatatattttcagcacaaaatatattcgaaataaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactaca 18509904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 19 - 341
Target Start/End: Complemental strand, 18596656 - 18596327
Alignment:
Q  19 acccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactcataaatttggaacagata 115  Q
    |||||||||||||||||||| ||| ||||||||| |   ||||||||||||||||||||        ||||||||||||||||||||||||||||  |||    
T  18596656 acccttgtttcagccccctctatcccaaggtttactctgattcaaggtctatatttata--------gtaaaagtataactcataaatttggaacgaata 18596565  T
Q  116 ccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttc 213  Q
    ||||||| || |||||           |||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18596564 ccacactgaa-gatacgttttttttttctccttcagtgatagaatatttgtatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttc 18596466  T
Q  214 ttcatacggtacaaaaatttatttat-----------tgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaac 302  Q
    || ||||||||||||||| |||||||           |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  18596465 tttatacggtacaaaaatatatttatggtatatttattgtccataaatatattttcaacacaaaatatatttgaaacaaatcttttatatttttagcaac 18596366  T
Q  303 aatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||| | ||||||||||||||||||||| ||||||    
T  18596365 aatattctccatccatcaaattttgagtcatagtacaac 18596327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 159 - 341
Target Start/End: Complemental strand, 21288713 - 21288530
Alignment:
Q  159 atttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtaca-aaaatttatttattgtccataaatatatttt 257  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||| |||||||||||||||||||||||||    
T  21288713 atttgcatcaaaaatataatattccctttcaaaatatatttgcataaaatcgttcttcatacggtaccgaaaatatatttattgtccataaatatatttt 21288614  T
Q  258 tagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
     |||||||||||||||| ||||||||||||| ||||||||||||||||||||| | ||||||||||||||||| ||||||||||    
T  21288613 cagcacaaaatatattttaaacaaatcttttttatttttagcaacaatattctccatccatcaaattttgagttatactacaac 21288530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 18466711 - 18466453
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc----aaggtttagt---attcaaggtctatatttatatatttatagtaaaagtata 93  Q
    |||||||||||||||||||||||||||||||||||||| |||||    || ||||||    || |||||||||||||||||        |||||| ||||    
T  18466711 ttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttata--------gtaaaaatata 18466620  T
Q  94 actcataaatttggaacagataccacactaaaagatacnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaat 193  Q
    |||||||||||||||||| |||||||||| || |||||         |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18466619 actcataaatttggaacaaataccacactgaa-gatactttttttt-ctcctttagtgaaagaatatttgcatcaaaaatataatattccctttcaaaat 18466522  T
Q  194 atatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagca 262  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  18466521 atatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatttttagca 18466453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 190 - 335
Target Start/End: Original strand, 17415748 - 17415893
Alignment:
Q  190 aaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatctttta 289  Q
    |||||||||||||||||||  | |||||||| |||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  17415748 aaatatatttgcatcaaattttccttcatacagtacaaaaatatatttattgtccataaatatattttcagcaaaaaatatatttgaaacaaatctttta 17415847  T
Q  290 tatttttagcaacaatattcttcttccatcaaattttgagtcatac 335  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  17415848 tatttttagcaacaatattcttcatccatcaaattttgagtcatac 17415893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 238 - 341
Target Start/End: Original strand, 6661929 - 6662032
Alignment:
Q  238 attgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatacta 337  Q
    |||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||| ||||||||||    
T  6661929 attgtccataaatatattttcaacacaaaatatatttgaaacaaatattttatatttttagcaacaatattcttcatccatcaagttttaagtcatacta 6662028  T
Q  338 caac 341  Q
    ||||    
T  6662029 caac 6662032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 15143373 - 15143262
Alignment:
Q  144 cttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtc 243  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||| | ||||||| ||||||||||| |||||||||||    
T  15143373 cttcagtgaaagaatatttgcatcaaa-------tattccctttcaaaatatatttgcatcaaatcttccttcatatggtacaaaaatgtatttattgtc 15143281  T
Q  244 cataaatatatttttagca 262  Q
    |||||||||||||||||||    
T  15143280 cataaatatatttttagca 15143262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 263 - 341
Target Start/End: Complemental strand, 40221361 - 40221283
Alignment:
Q  263 caaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||    
T  40221361 caaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatcaattaaattttgagtcatactacaac 40221283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 259 - 332
Target Start/End: Original strand, 5779144 - 5779217
Alignment:
Q  259 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 332  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| |||||| || |||||||||| |||||    
T  5779144 agcacaaaatatatttgaaacaaatcttttatatttttagcaataatcttcttcatctatcaaattttaagtca 5779217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 209
Target Start/End: Complemental strand, 40221408 - 40221340
Alignment:
Q  141 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatc 209  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||    
T  40221408 ctcctgcagtgaaagaatatttgcatcaaaaatataatattccttttcaaaatatatttgaaacaaatc 40221340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 288 - 341
Target Start/End: Complemental strand, 18466465 - 18466412
Alignment:
Q  288 tatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  18466465 tatatttttagcaacaatattctccatccatcaaattttgagtcatactacaac 18466412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 17072910 - 17072859
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  17072910 ttgttgttgtctttctaaacccttgtttcagccccctctatctcaaggttta 17072859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 25904130 - 25904079
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  25904130 ttgttgttgtctttctaaacccttgtttcagccccctctatctcaaggttta 25904079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 31472865 - 31472916
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  31472865 ttgttgttgcctttctaaacccttgttttagccccctctatctcaaggttta 31472916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 40221549 - 40221498
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  40221549 ttgttgttgccattctaaacccttgtttcagccccctctatctcaaggttta 40221498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 2818588 - 2818664
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 74  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||| ||||| |   || |||||||||||||||||    
T  2818588 ttgttgttacctttctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttata 2818664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 20043077 - 20043027
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  20043077 ttgttgttgcctttctaaacacttgtttcagccccctctatctcaaggttt 20043027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 31542762 - 31542712
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  31542762 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagttt 31542712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 15143274 - 15143225
Alignment:
Q  288 tatatttttagcaacaatattcttcttccatcaaattttgagtcatacta 337  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  15143274 tatatttttagcaacaatattctccatccatcaaattttgagtcatacta 15143225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 20507717 - 20507765
Alignment:
Q  4 ttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  20507717 ttgttgcctttctaaacccttgtttcagccccctctatctcaaagttta 20507765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 34530918 - 34530992
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatattta 72  Q
    |||||||||| ||||||||| ||||||||||||||||| ||||||||||||| |   |||||| |||||||||||    
T  34530918 ttgttgttgcatttctaaacacttgtttcagccccctctatctcaaggtttactctgattcaaagtctatattta 34530992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 695916 - 695865
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||||||| ||||||  |||||||||||||    
T  695916 ttgttgttgcctttctaaacccttgtttcatccccctttatctcaaggttta 695865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 2174946 - 2174903
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  2174946 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 2174903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 4410088 - 4410045
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  4410088 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 4410045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 10474575 - 10474626
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||||||||||||| |||||||||||||||||| || ||||||||||    
T  10474575 ttgttgttgcctttctaaatccttgtttcagccccctctatttcaaggttta 10474626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 34477306 - 34477349
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  34477306 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 34477349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 34479671 - 34479714
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  34479671 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 34479714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 39398245 - 39398295
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  39398245 ttgttgttgcctttctaaacccttgtttcag-cccctctatctcaaggttta 39398295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 16776185 - 16776135
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||| ||||    
T  16776185 ttgttgttgcctttgtaaacccttgtttcagccccctctatctcaaagttt 16776135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 25921725 - 25921775
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| ||||    
T  25921725 ttgttgttgtctttctaaacccttgtttcagccccctctatctcaaagttt 25921775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 31179623 - 31179673
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||| ||||    
T  31179623 ttgttgttgcctttctaaacccttgtttcagctccctctatctcaaagttt 31179673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 31545107 - 31545057
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    |||||||||||||||||||||||||||||||||||||  ||||||| ||||    
T  31545107 ttgttgttgcctttctaaacccttgtttcagccccctttatctcaaagttt 31545057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 18469038 - 18469001
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctc 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18469038 ttgttgttgcctttctaaacccttgtttcagccccctc 18469001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 21288788 - 21288710
Alignment:
Q  4 ttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatattt 79  Q
    |||||||  |||||||||||| ||||| ||||||| ||||||||||||| |   |||||||||||||||||||| ||||    
T  21288788 ttgttgctattctaaacccttatttcaaccccctctatctcaaggtttactctaattcaaggtctatatttataaattt 21288710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1189861 - 1189904
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||| ||||||||||||||||| |||||    
T  1189861 ttgttgttgcctttctaaactcttgtttcagccccctctatctc 1189904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6747333 - 6747290
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||| ||||||||||||||||||||||||||| |||||    
T  6747333 ttgttgttgcttttctaaacccttgtttcagccccctctatctc 6747290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 6756521 - 6756470
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||||||||||||||| |||||||||| ||||| ||||||| |||||    
T  6756521 ttgttgttgcctttctaaaccattgtttcagctccctctatctcaaagttta 6756470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 16092452 - 16092495
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||| ||||||| |||||    
T  16092452 ttgttgttgcctttctaaacccttgtttcaaccccctctatctc 16092495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 21684703 - 21684746
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||| ||||||||||||||||||||||| |||||    
T  21684703 ttgttgttgcctttttaaacccttgtttcagccccctctatctc 21684746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 24126883 - 24126832
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||| |||||||||| |||||||||||||| || |||||||||||||    
T  24126883 ttgttgttgtctttctaaactcttgtttcagccccatctatctcaaggttta 24126832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 37706032 - 37706083
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||| |||||||||||||||| || ||||||||||||| |||||||||||||    
T  37706032 ttgtcgttgcctttctaaacctttatttcagccccctctatctcaaggttta 37706083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 38882133 - 38882098
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccc 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  38882133 ttgttgttgcctttctaaacccttgtttcagccccc 38882098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 10529351 - 10529401
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    |||||||||||||||||||||||||||||| ||| ||| ||||||| ||||    
T  10529351 ttgttgttgcctttctaaacccttgtttcaacccactctatctcaaagttt 10529401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 12556175 - 12556251
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 74  Q
    ||||||||| | |||||||||||| ||||||||||||| ||||||| ||||| |   || |||||||||||||||||    
T  12556175 ttgttgttgtcattctaaacccttatttcagccccctctatctcaaagtttactctgatacaaggtctatatttata 12556251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 20045037 - 20044987
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    |||||||||| || ||||||||||||||||||||||||  |||||||||||    
T  20045037 ttgttgttgctttcctaaacccttgtttcagccccctctgtctcaaggttt 20044987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 39854510 - 39854476
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagcccc 35  Q
    |||||||||||||||||||||||||||||||||||    
T  39854510 ttgttgttgcctttctaaacccttgtttcagcccc 39854476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 27912563 - 27912526
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctc 38  Q
    |||||||||||||||||||||||||||||||| |||||    
T  27912563 ttgttgttgcctttctaaacccttgtttcagcaccctc 27912526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 73 - 110
Target Start/End: Original strand, 41586025 - 41586062
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaac 110  Q
    |||||||||||||||||||||||||||| |||||||||    
T  41586025 tatatttatagtaaaagtataactcatagatttggaac 41586062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 4236656 - 4236620
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccct 37  Q
    |||||||||||||||||||| ||||||||||||||||    
T  4236656 ttgttgttgcctttctaaactcttgtttcagccccct 4236620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 36208597 - 36208531
Alignment:
Q  12 tttctaaacccttgttt-cagccccctccatctcaaggtttagt---attcaaggtctatatttata 74  Q
    ||||||||||||||||| |||||||||| ||||||||||||| |   || |||||||||||||||||    
T  36208597 tttctaaacccttgttttcagccccctctatctcaaggtttactctgatacaaggtctatatttata 36208531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 17818742 - 17818792
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||| |||||||||| ||||||  ||||||||||||    
T  17818742 ttgttgttgcctttctaaactcttgtttcag-cccctctttctcaaggttta 17818792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 25804052 - 25804009
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    ||||||||||| |||||||||||||||| ||||||||| |||||    
T  25804052 ttgttgttgccattctaaacccttgtttgagccccctctatctc 25804009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 52
Target Start/End: Original strand, 36402592 - 36402631
Alignment:
Q  13 ttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||| ||||||| |||||    
T  36402592 ttctaaacccttgtttcagccccctctatctcaacgttta 36402631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 52
Target Start/End: Original strand, 41585970 - 41586009
Alignment:
Q  13 ttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||  |||||||||||||    
T  41585970 ttctaaacccttgtttcagccccctttatctcaaggttta 41586009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 295
Target Start/End: Original strand, 2532750 - 2532784
Alignment:
Q  261 cacaaaatatatttgaaacaaatcttttatatttt 295  Q
    ||||| |||||||||||||||||||||||||||||    
T  2532750 cacaagatatatttgaaacaaatcttttatatttt 2532784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 6661446 - 6661510
Alignment:
Q  13 ttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 74  Q
    |||||||||||||||||| ||| ||| ||||||||||||| |   || |||||||||||||||||    
T  6661446 ttctaaacccttgtttcaaccctctctatctcaaggtttactctgatacaaggtctatatttata 6661510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 6661594 - 6661648
Alignment:
Q  176 aatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaa 230  Q
    |||||||||||||||||||||||| | ||||||| | |||||| | |||||||||    
T  6661594 aatattccctttcaaaatatatttacttcaaatcttccttcattcagtacaaaaa 6661648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 10586869 - 10586835
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagcccc 35  Q
    ||||||||||| |||||||||||||||||||||||    
T  10586869 ttgttgttgccattctaaacccttgtttcagcccc 10586835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 21948053 - 21948019
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagcccc 35  Q
    ||||||||| |||||||||||||||||||||||||    
T  21948053 ttgttgttgtctttctaaacccttgtttcagcccc 21948019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 15552272 - 15552235
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctc 38  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  15552272 ttgttgttgcttttctaaacccttgtttcagtcccctc 15552235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 6745096 - 6745060
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccct 37  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  6745096 ttgttgttgcttttctaaacacttgtttcagccccct 6745060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 237
Target Start/End: Complemental strand, 32520316 - 32520268
Alignment:
Q  189 aaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttattt 237  Q
    ||||||| ||||||||||||  |||||| |||||||||||||| |||||    
T  32520316 aaaatatgtttgcatcaaatttttcttcgtacggtacaaaaatatattt 32520268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 195; Significance: 1e-106; HSPs: 86)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 73 - 341
Target Start/End: Original strand, 22132718 - 22132986
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 171  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||          |||||||||||||||||||||||||||||||    
T  22132718 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gatacgtttttttttctccttcagtgaaagaatatttgcatcaaaa 22132816  T
Q  172 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatata 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  22132817 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatata 22132916  T
Q  272 tttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||    
T  22132917 tttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgaatcatactacaac 22132986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 341
Target Start/End: Complemental strand, 5101078 - 5100744
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactc 97  Q
    ||||||||| | ||||||||| ||||||||| |||||| |||||||||||||     ||||||||||||||||||||        |||||||||||||||    
T  5101078 ttgttgttgtcattctaaacctttgtttcagtcccctctatctcaaggtttaccctgattcaaggtctatatttata--------gtaaaagtataactc 5100987  T
Q  98 ataaatttggaacagataccacactaaaagatacnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatat 197  Q
    |||||||||||||  |||||| | | || |||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5100986 ataaatttggaacgaataccagattgaa-gatacgttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatat 5100888  T
Q  198 ttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatattttta 297  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  5100887 ttgcatcaaatcgttcttcatacggtacaaaaatatatttgttgtccataaatatattttcagcacaaaatatatttaaaacaaatcttttatattttta 5100788  T
Q  298 gcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||| | ||||||||||||||||||||||||||||    
T  5100787 gcaacaatattctccatccatcaaattttgagtcatactacaac 5100744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 341
Target Start/End: Original strand, 14787683 - 14788020
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc--aaggtttagtatt---caaggtctatatttatatatttatagtaaaagtataac 95  Q
    ||||||||||| |||||||||||||||||||||||||| |||||  || |||||||||    |||||||||||||||||        |||||||||||||    
T  14787683 ttgttgttgccattctaaacccttgtttcagccccctctatctctcaaagtttagtatgatacaaggtctatatttata--------gtaaaagtataac 14787774  T
Q  96 tcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaata 194  Q
    |||||||||||||||  |||||||||| || |||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14787775 tcataaatttggaacgaataccacactgaa-gatacgtttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaata 14787873  T
Q  195 tatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatattt 294  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  14787874 tatttgcatcaaatcgttctttatacggtacaaaaatatatttattgtccataaatatattttcaccacaaaatatatttgaaacaaatcttttatattt 14787973  T
Q  295 ttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||| |||||| | ||||||||||||||||||||||||||||    
T  14787974 ttagcaacattattctccatccatcaaattttgagtcatactacaac 14788020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 73 - 341
Target Start/End: Original strand, 22134949 - 22135218
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 170  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||           ||||||||||||||||||||||| ||||||    
T  22134949 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gatacgttttttttttctccttcagtgaaagaatatttgaatcaaa 22135047  T
Q  171 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatat 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  22135048 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatat 22135147  T
Q  271 atttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  22135148 atttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaac 22135218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 73 - 341
Target Start/End: Original strand, 17662557 - 17662825
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 171  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||          |||||||||||||||||||||||||||||||    
T  17662557 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gatacttttttttttctccttcagtgaaagaatatttgcatcaaaa 17662655  T
Q  172 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatata 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  17662656 atataatattccctttcaaaatatatttgcatcaaatcgttcttcgtacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatata 17662755  T
Q  272 tttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||| ||||||||||||||||||||||||||||||||||| | ||||||||||||  ||||||||||||||    
T  17662756 tttaaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttgtagtcatactacaac 17662825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 341
Target Start/End: Complemental strand, 24348299 - 24347960
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc----aaggtttagt---attcaaggtctatatttatatatttatagtaaaagtata 93  Q
    |||||||||||||||||||||||||||||||||||||| |||||    || ||||||    || |||||||||||||||||        |||||||||||    
T  24348299 ttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcttgatacaaggtctatatttata--------gtaaaagtata 24348208  T
Q  94 actcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaa 191  Q
    |||||||||||||||||| |||||||| | || |||||           |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24348207 actcataaatttggaacaaataccacattgaa-gatactttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaa 24348109  T
Q  192 atatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttata 291  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  24348108 atatatttgcatcaaatcgttcttcatacaatacaaaaatatatttattgtccataaatata-ttttcgcacaaaatatatttgaaacaaatcttttata 24348010  T
Q  292 tttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  24348009 tttttagcaacaatattctccatccatcaaattttgagtcatactacaac 24347960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 1 - 341
Target Start/End: Original strand, 44600090 - 44600427
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactc 97  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||| ||||  |   || |||||||||||||||||        |||||||||||||||    
T  44600090 ttgttgttgcttttctaaacccttgtttcagccccctctatctcaaagtttgctttaatacaaggtctatatttata--------gtaaaagtataactc 44600181  T
Q  98 ataaatttggaacagataccacactaaaagatacnnnnnnnnn---ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaata 194  Q
    ||||||||| |||| |||||||||| || ||| |            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  44600182 ataaatttgaaacaaataccacactgaa-gattcgttttttttttcctccttcagtgaaagaatatttgcatcaaaaatataatattcccttttaaaata 44600280  T
Q  195 tatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatattt 294  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  44600281 tatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatattt 44600380  T
Q  295 ttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||||||||||| | |||||||| |||||||||||||||||||    
T  44600381 ttagcaacaatattctccatccatcaatttttgagtcatactacaac 44600427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 1 - 341
Target Start/End: Complemental strand, 56030525 - 56030190
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactc 97  Q
    ||||||||| | ||||||||||||||||||||||| || ||||||||||||| |   || ||| | |        |||||||||||||||| ||||||||    
T  56030525 ttgttgttgtcattctaaacccttgtttcagccccttctatctcaaggtttactctgatacaaagcc--------tatatttatagtaaaaatataactc 56030434  T
Q  98 ataaatttggaacagataccacactaaaagatac-nnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatata 196  Q
    ||||||||||||   |||||||||   |||||||          ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  56030433 ataaatttggaaagaataccacac-cgaagatacttttttttttctccttcagtgaaagaatatttgcaccaaaaatataatattccctttcaaaatata 56030335  T
Q  197 tttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatattttt 296  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  56030334 tttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttt 56030235  T
Q  297 agcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||||||||| | ||||||||||||||||||||||||||||    
T  56030234 agcaacaatattctccatccatcaaattttgagtcatactacaac 56030190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 141 - 326
Target Start/End: Complemental strand, 30136516 - 30136331
Alignment:
Q  141 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttatt 240  Q
    |||||||| |||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  30136516 ctccttcaatgaaagaatatttgaatcaaaaatataatattctcttttaaaatatatttgcatcaaatcgttcttcatacagtacaaaaatatatttatt 30136417  T
Q  241 gtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaatttt 326  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||    
T  30136416 gtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccattcatcaaatttt 30136331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 192 - 341
Target Start/End: Original strand, 47211158 - 47211307
Alignment:
Q  192 atatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttata 291  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  47211158 atatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttgagcacaaaatatatttgaaacaaatcttttata 47211257  T
Q  292 tttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||||||| | ||||||||||||| ||||||||||||||    
T  47211258 tttttagcaacaatattctccatccatcaaattttaagtcatactacaac 47211307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 142 - 341
Target Start/End: Complemental strand, 9022252 - 9022061
Alignment:
Q  142 tccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattg 241  Q
    ||||| |||||||||||||||||||||||       |||||||||| ||||||||||||||||||||| |||||||||||||| |||||| |||||||||    
T  9022252 tcctttagtgaaagaatatttgcatcaaa-------tattcccttttaaaatatatttgcatcaaatctttcttcatacggtagaaaaatatatttattg 9022160  T
Q  242 tccataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    || ||||||||||||| |||| ||||||||||||||||||||| |||||||||| | ||||||||||  || ||||| ||||||||| ||||||||||||    
T  9022159 tc-ataaatatattttcagcaaaaaatatatttgaaacaaatcatttatattttcaacaacaatatttctcatccataaaattttgaatcatactacaac 9022061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 141 - 341
Target Start/End: Original strand, 38890517 - 38890700
Alignment:
Q  141 ctccttcagtgaaagaatatttgcatcaaaaatataatatt-ccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttat 239  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||  ||||||||| |||||||    
T  38890517 ctcctttagtgaaagaatatttgcatcaaaaatataatatttccctttcaaaatatatttgcatcaaatcgtccttcatacaatacaaaaatatatttat 38890616  T
Q  240 tgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactaca 339  Q
    ||||||||                  ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||    
T  38890617 tgtccata------------------aatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatgctaca 38890698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 141 - 341
Target Start/End: Complemental strand, 10112815 - 10112627
Alignment:
Q  141 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttatt 240  Q
    |||||| ||||||| |||||||||||||||       ||||| |||||||| ||||||| ||||||||| | ||||||||| ||||||||| ||||||||    
T  10112815 ctcctttagtgaaataatatttgcatcaaa-------tattctctttcaaa-tatatttacatcaaatcttccttcatacgatacaaaaatatatttatt 10112724  T
Q  241 gtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 340  Q
    ||||||||||||| ||| |||||||||||||||||||||    ||||||||||||||||||||||||||||| | || |||||||| |||||||||||||    
T  10112723 gtccataaatatagtttcagcacaaaatatatttgaaac----cttttatatttttagcaacaatattcttcattcaacaaattttaagtcatactacaa 10112628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 188 - 341
Target Start/End: Complemental strand, 9863650 - 9863500
Alignment:
Q  188 caaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttt 287  Q
    |||||||||||||||||||||| | |||||| |   |||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||    
T  9863650 caaaatatatttgcatcaaatcttccttcatgc---acaaaaatatatttattgttcataaatatatttttagcacaaaatatgtttgaaacaaatcatt 9863554  T
Q  288 tatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||| ||||||||  ||| |||| |||||||||||||||| ||||||    
T  9863553 tatatttttagtaacaatatatttcatccaacaaattttgagtcatattacaac 9863500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 19322641 - 19322551
Alignment:
Q  141 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaat 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||    
T  19322641 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgtcctttatacagtacaaaaat 19322551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 73 - 214
Target Start/End: Complemental strand, 53405141 - 53404998
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn---ctccttcagtgaaagaatatttgcatcaa 169  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||            |||||| ||||||||||||||||||||||    
T  53405141 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaaa-atacgtttttttttttctcctttagtgaaagaatatttgcatcaa 53405043  T
Q  170 aaatataatattccctttcaaaatatatttgcatcaaatcgttct 214  Q
    ||||||||| || ||||||||||||||||||||||||||||||||    
T  53405042 aaatataatttttcctttcaaaatatatttgcatcaaatcgttct 53404998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 176 - 332
Target Start/End: Original strand, 38209098 - 38209259
Alignment:
Q  176 aatattccctttcaaa-atatatttgcatcaaatcgttcttcatacggtacaaaaatttatttat--tgtccataaatatattttt--agcacaaaatat 270  Q
    |||||||| ||||||| |||||||||||||||||| | |||||||| |||||||||| |||||||  | || | ||  || || ||  ||||||||||||    
T  38209098 aatattccttttcaaatatatatttgcatcaaatcttccttcatacagtacaaaaatatatttatattttcaacaacaatcttcttgaagcacaaaatat 38209197  T
Q  271 atttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 332  Q
    |||| |||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||    
T  38209198 atttaaaacaaatcttttatatttttaacaacaatatttttcatccatcaaattttgagtca 38209259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 241 - 340
Target Start/End: Complemental strand, 19322510 - 19322410
Alignment:
Q  241 gtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttttagc-aacaatattcttcttccatcaaattttgagtcatactaca 339  Q
    ||||||||||||||||| || | ||||||||||| |||||||||||||||||||||||| || |||||||| | ||||||||||||||||||||||||||    
T  19322510 gtccataaatatattttcagtataaaatatatttaaaacaaatcttttatatttttagcaaaaaatattctccatccatcaaattttgagtcatactaca 19322411  T
Q  340 a 340  Q
    |    
T  19322410 a 19322410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 271 - 341
Target Start/End: Original strand, 14789500 - 14789570
Alignment:
Q  271 atttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  14789500 atttgaaacaaatcttttatatttttagcaacattattcttcatccatcaaattttgagtcatactacaac 14789570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 54929094 - 54929180
Alignment:
Q  176 aatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagca 262  Q
    ||||||||  || ||||||||||||||||||||| | ||||||||||||||||||| ||||| ||||||||||||||||||| ||||    
T  54929094 aatattcctattaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatattttttgtccataaatatattttcagca 54929180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 47274808 - 47274732
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 74  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||   || |||||||||||||||||    
T  47274808 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttata 47274732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 262
Target Start/End: Complemental strand, 10979755 - 10979676
Alignment:
Q  183 cctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagca 262  Q
    ||||| ||||||||||||||||||||| | |||||||| | |||||||| ||||| ||||||||||||||||||| ||||    
T  10979755 cctttaaaaatatatttgcatcaaatcttccttcatacagcacaaaaatatatttgttgtccataaatatattttcagca 10979676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 37313318 - 37313369
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  37313318 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggttta 37313369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 18709490 - 18709539
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacact 122  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18709490 tatatttatagtaaaagtataactcataaatttggaacaaataccacact 18709539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 24446833 - 24446882
Alignment:
Q  3 gttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  24446833 gttgttgcctttctaaacccttgtttcagccccctctatctcaaggttta 24446882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 47211065 - 47211114
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacact 122  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  47211065 tatatttatagtaaaagtataactcataaatttggaacaaataccacact 47211114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 2891398 - 2891347
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  2891398 ttgttgttgcctttctaaacccttgtttcagccccctctatcttaaggttta 2891347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 33415739 - 33415790
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  33415739 ttgttgttacctttctaaacccttgtttcagccccctctatctcaaggttta 33415790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 36378373 - 36378322
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  36378373 ttgttgttgcctttctaaacccttgtttcagccccgtctatctcaaggttta 36378322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 38928430 - 38928481
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  38928430 ttgttgttgcctttctaaactcttgtttcagccccctctatctcaaggttta 38928481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 5198501 - 5198451
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  5198501 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagttt 5198451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 326
Target Start/End: Original strand, 5516771 - 5516833
Alignment:
Q  264 aaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaatttt 326  Q
    |||||||||||||||||| || ||||||||||||||||||||||||| | | |||||||||||    
T  5516771 aaaatatatttgaaacaattcatttatatttttagcaacaatattctccattcatcaaatttt 5516833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 22802986 - 22803062
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 74  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||| ||||| |   || |||||||||||||||||    
T  22802986 ttgttgttgccattctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttata 22803062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 40091667 - 40091743
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 74  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| ||||| |   || |||||||||||||||||    
T  40091667 ttgttgttgtctttctaaacccttgtttcagccccctctatctcaaagtttactttgatacaaggtctatatttata 40091743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 48486400 - 48486324
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 74  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||| ||||| |   || |||||||||||||||||    
T  48486400 ttgttgttgccattctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttata 48486324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 259 - 328
Target Start/End: Original strand, 29609914 - 29609983
Alignment:
Q  259 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttga 328  Q
    |||||||||||||||||||| |||||    ||| |||||||||||||||||||| |||||||||||||||    
T  29609914 agcacaaaatatatttgaaaaaaatcaagaatacttttagcaacaatattcttcatccatcaaattttga 29609983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 3937464 - 3937512
Alignment:
Q  4 ttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  3937464 ttgttgcctttctaaacccttgtttcagctccctctatctcaaggttta 3937512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 261 - 332
Target Start/End: Original strand, 54929198 - 54929267
Alignment:
Q  261 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 332  Q
    ||||||||| |||| || |||||||||||||||||||||||||||||| |  |||||||||||||| |||||    
T  54929198 cacaaaatacatttaaatcaaatcttttatatttttagcaacaatattat--ttccatcaaattttaagtca 54929267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 7941402 - 7941359
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  7941402 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 7941359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 8631671 - 8631714
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  8631671 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 8631714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 11006489 - 11006532
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  11006489 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 11006532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 11008818 - 11008861
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  11008818 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 11008861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 11435036 - 11434993
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  11435036 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 11434993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 12396097 - 12396148
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||||||||||||| ||||||||||||||| || |||||||||||||    
T  12396097 ttgttgttgcctttctaaatccttgtttcagccccatctatctcaaggttta 12396148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 12401059 - 12401110
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||||||||||||| ||||||||||||||| || |||||||||||||    
T  12401059 ttgttgttgcctttctaaatccttgtttcagccccatctatctcaaggttta 12401110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 19095963 - 19095912
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||| | |||||||||||||||||||||||||| |||||||||||||    
T  19095963 ttgttgttgtcattctaaacccttgtttcagccccctctatctcaaggttta 19095912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 22044642 - 22044685
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  22044642 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 22044685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 22046937 - 22046980
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  22046937 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 22046980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 24888877 - 24888834
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  24888877 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 24888834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 31849851 - 31849894
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  31849851 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 31849894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 38270238 - 38270289
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||||||||||||||||||||||||||| | || |||||||||||||    
T  38270238 ttgttgttgcctttctaaacccttgtttcagcctcttctatctcaaggttta 38270289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 40637155 - 40637112
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  40637155 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 40637112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 51015327 - 51015284
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  51015327 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 51015284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 619699 - 619775
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 74  Q
    ||||||||| |||| ||||||||||||||||||||||| ||||||| ||||| |   || |||||||||||||||||    
T  619699 ttgttgttgtctttataaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttata 619775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 6764920 - 6764870
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| ||||    
T  6764920 ttgttgttgcctttctaaacccttgtttcagccccttctatctcaaagttt 6764870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 18847234 - 18847184
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||| ||||    
T  18847234 ttgttgttgcctttctaaacccttgtttcaaccccctctatctcaaagttt 18847184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 22801114 - 22801190
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 74  Q
    ||||||||| | |||||||||||||||||||||||||| ||||||| ||||| |   || |||||||||||||||||    
T  22801114 ttgttgttgtcattctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttata 22801190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 52942698 - 52942775
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt-----attcaaggtctatatttata 74  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| |||||||     || |||||||||||||||||    
T  52942698 ttgttgttgcctttctaaacccttgtttcagcccc-tctatctcaaagtttagtctgatatacaaggtctatatttata 52942775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 17662486 - 17662523
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctc 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17662486 ttgttgttgcctttctaaacccttgtttcagccccctc 17662523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 18709415 - 18709452
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctc 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18709415 ttgttgttgcctttctaaacccttgtttcagccccctc 18709452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 47210992 - 47211029
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctc 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  47210992 ttgttgttgcctttctaaacccttgtttcagccccctc 47211029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 36919837 - 36919873
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccct 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  36919837 ttgttgttgcctttctaaacccttgtttcagccccct 36919873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 5637717 - 5637760
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||| ||||||||||||||||| |||||    
T  5637717 ttgttgttgcctttctaaactcttgtttcagccccctctatctc 5637760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 9148334 - 9148291
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    ||||||||||||||||||||||||| |||||||||||| |||||    
T  9148334 ttgttgttgcctttctaaacccttgcttcagccccctctatctc 9148291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 9174398 - 9174441
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||| ||||||||||||||||||||||||||| |||||    
T  9174398 ttgttgttgcttttctaaacccttgtttcagccccctctatctc 9174441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 9176726 - 9176769
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||| ||||||||||||||||||||||||||| |||||    
T  9176726 ttgttgttgcttttctaaacccttgtttcagccccctctatctc 9176769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 16453390 - 16453347
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||| ||||||||||||||||||||||| |||||    
T  16453390 ttgttgttgcctttttaaacccttgtttcagccccctctatctc 16453347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 37089623 - 37089666
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    ||||||||||| |||||||||||||||||||||||||| |||||    
T  37089623 ttgttgttgccattctaaacccttgtttcagccccctctatctc 37089666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 16932041 - 16932091
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    |||||||||| ||||||||||||||| ||||||||||| ||||||| ||||    
T  16932041 ttgttgttgcttttctaaacccttgtatcagccccctctatctcaaagttt 16932091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 16934395 - 16934445
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    |||||||||| ||||||||||||||| ||||||||||| ||||||| ||||    
T  16934395 ttgttgttgcttttctaaacccttgtatcagccccctctatctcaaagttt 16934445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 22132642 - 22132676
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagcccc 35  Q
    |||||||||||||||||||||||||||||||||||    
T  22132642 ttgttgttgcctttctaaacccttgtttcagcccc 22132676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 22134867 - 22134901
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagcccc 35  Q
    |||||||||||||||||||||||||||||||||||    
T  22134867 ttgttgttgcctttctaaacccttgtttcagcccc 22134901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 24879070 - 24878994
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta---gtattcaaggtctatatttata 74  Q
    ||||||||| ||||||||||||| |||||||||||||| ||||| | |||||   | || |||||||||||||||||    
T  24879070 ttgttgttgtctttctaaaccctagtttcagccccctctatctccaagtttactcggatacaaggtctatatttata 24878994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 53405211 - 53405177
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagcccc 35  Q
    |||||||||||||||||||||||||||||||||||    
T  53405211 ttgttgttgcctttctaaacccttgtttcagcccc 53405177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 257
Target Start/End: Original strand, 29609838 - 29609895
Alignment:
Q  200 gcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttt 257  Q
    |||||||||| | ||||||||||||||||||| |||||| | | ||||||||||||||    
T  29609838 gcatcaaatcttccttcatacggtacaaaaatatatttactcttcataaatatatttt 29609895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 2485124 - 2485160
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccct 37  Q
    |||||||||||||||||||||||||||| ||||||||    
T  2485124 ttgttgttgcctttctaaacccttgttttagccccct 2485160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 18409599 - 18409631
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  18409599 ttgttgttgcctttctaaacccttgtttcagcc 18409631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 52
Target Start/End: Original strand, 15032800 - 15032839
Alignment:
Q  13 ttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||  |||||||||||||    
T  15032800 ttctaaacccttgtttcagccccctttatctcaaggttta 15032839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 52
Target Start/End: Complemental strand, 19322766 - 19322727
Alignment:
Q  13 ttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||| ||||||| |||||||||||||    
T  19322766 ttctaaacccttgtttcatccccctctatctcaaggttta 19322727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 22780625 - 22780668
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||| ||||||||||| ||||||||||||||| |||||    
T  22780625 ttgttgttgcttttctaaacccctgtttcagccccctctatctc 22780668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 22782990 - 22783033
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||| ||||||||||| ||||||||||||||| |||||    
T  22782990 ttgttgttgcttttctaaacccctgtttcagccccctctatctc 22783033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 38409286 - 38409243
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||| |||||| |||||||||||||||| |||||    
T  38409286 ttgttgttgcctttttaaaccattgtttcagccccctctatctc 38409243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 41997573 - 41997522
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||| ||||||| ||| ||||||||||||||||  |||||||||||||    
T  41997573 ttgttgtttcctttctgaacacttgtttcagccccctttatctcaaggttta 41997522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 47868482 - 47868439
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||| ||||||||| ||| |||||    
T  47868482 ttgttgttgcctttctaaacccttctttcagccctctctatctc 47868439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 14633400 - 14633325
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 74  Q
    ||||||||||||||||||||| ||||||||||||  || ||||||| ||||| |   || |||||||||||||||||    
T  14633400 ttgttgttgcctttctaaacctttgtttcagccct-tctatctcaaagtttactctgatacaaggtctatatttata 14633325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 24880532 - 24880456
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 74  Q
    ||||||||||||||||||||||| ||||  |||||||| ||||| | ||||| |   || |||||||||||||||||    
T  24880532 ttgttgttgcctttctaaaccctagtttacgccccctctatctccaagtttactccgatacaaggtctatatttata 24880456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 194; Significance: 1e-105; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 341
Target Start/End: Complemental strand, 52047 - 51710
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc--aaggtttagtatt---caaggtctatatttatatatttatagtaaaagtataac 95  Q
    ||||||||||| |||||||||||||||||||||||||| |||||  || |||||||||    |||||||||||||||||        |||||||||||||    
T  52047 ttgttgttgccattctaaacccttgtttcagccccctctatctctcaaagtttagtatgatacaaggtctatatttata--------gtaaaagtataac 51956  T
Q  96 tcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaata 194  Q
    |||||||||||||||  |||||||||| || |||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51955 tcataaatttggaacgaataccacactgaa-gatacgtttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaata 51857  T
Q  195 tatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatattt 294  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  51856 tatttgcatcaaatcgttctttatacggtacaaaaatatatttattgtccataaatatattttcaccacaaaatatatttgaaacaaatcttttatattt 51757  T
Q  295 ttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||| |||||| | ||||||||||||||||||||||||||||    
T  51756 ttagcaacattattctccatccatcaaattttgagtcatactacaac 51710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 271 - 341
Target Start/End: Complemental strand, 50230 - 50160
Alignment:
Q  271 atttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  50230 atttgaaacaaatcttttatatttttagcaacattattcttcatccatcaaattttgagtcatactacaac 50160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 183892 - 183967
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 74  Q
    ||||||||||||||||||||| ||||||||||||  || ||||||| ||||| |   || |||||||||||||||||    
T  183892 ttgttgttgcctttctaaacctttgtttcagccct-tctatctcaaagtttactctgatacaaggtctatatttata 183967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 193; Significance: 1e-105; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 341
Target Start/End: Complemental strand, 42452786 - 42452450
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactc 97  Q
    |||||||||||||||||||||||||||||||||||||| ||||| | ||||  |   || ||| |||||||||||||         ||||||||||||||    
T  42452786 ttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaatgtctatatttataa--------taaaagtataactc 42452695  T
Q  98 ataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatat 195  Q
    |||||||||||||| |||||||||  || |||||           |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42452694 ataaatttggaacaaataccacaccgaa-gatacattttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatat 42452596  T
Q  196 atttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttt 295  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  42452595 atttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttt 42452496  T
Q  296 tagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  42452495 tagcaacaatattcttcatccatcaaattttaagtcatactacaac 42452450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 341
Target Start/End: Original strand, 42923761 - 42924093
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc--aaggtttagtat---tcaaggtctatatttatatatttatagtaaaagtataac 95  Q
    ||||||||||| ||||||||||||||||||||| |||| |||||  |||||||| |||   ||||||||||||||||||        |||||||||||||    
T  42923761 ttgttgttgccattctaaacccttgtttcagcctcctctatctctcaaggtttactatgattcaaggtctatatttata--------gtaaaagtataac 42923852  T
Q  96 tcataaatttggaacagataccacactaaaagatacnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatat 195  Q
    ||||||||||||||| ||    ||||   |||||||         ||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  42923853 tcataaatttggaac-ga----acacctgaagatacttatttgttctccttcagtgaaagaatatttgcatcaaaaatataatatttcttttcaaaatat 42923947  T
Q  196 atttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttt 295  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  42923948 atttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttt 42924047  T
Q  296 tagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||    
T  42924048 tagcaacaatattctccatccatcaaattttgagtcatactacaac 42924093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 73 - 341
Target Start/End: Original strand, 35215915 - 35216183
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 171  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||  || ||| |          |||||||||||||||||||| ||||||||||    
T  35215915 tatatttatagtaaaagtataactcataaatttggaacaaataccacaccgaa-gattcatttttttttctccttcagtgaaagaatatctgcatcaaaa 35216013  T
Q  172 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatata 271  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  35216014 atataatattccctttcaaaatatatttgcatcaaatcgttctttatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatata 35216113  T
Q  272 tttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  35216114 tttgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaattttgagtcatactacaac 35216183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 73 - 341
Target Start/End: Original strand, 35218296 - 35218564
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 171  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||| || ||| |          |||||||||||||||||||||||||||||||    
T  35218296 tatatttatagtaaaagtataactcataaatttggagcaaataccacactgaa-gattcgtttttttttctccttcagtgaaagaatatttgcatcaaaa 35218394  T
Q  172 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatata 271  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  35218395 atataatattctctttcaaaatatatttgcatcaaatcgttctttatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatata 35218494  T
Q  272 tttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  35218495 tttgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaattttgagtcatactacaac 35218564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 73 - 341
Target Start/End: Original strand, 23452560 - 23452828
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 171  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || | |||          |||||||||||||||||||||||||||||||    
T  23452560 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagg-tacttttttttttctccttcagtgaaagaatatttgcatcaaaa 23452658  T
Q  172 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatata 271  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||| |||||| |||| ||||||||    
T  23452659 atataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatttattttcagcataaaatata 23452758  T
Q  272 tttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  23452759 tttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaac 23452828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 141 - 341
Target Start/End: Original strand, 27583713 - 27583906
Alignment:
Q  141 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttatt 240  Q
    ||||||||||||||||||||||||||||||       |||||| ||||||||||||||||||||||||  | ||||||| |||| |||||| ||||||||    
T  27583713 ctccttcagtgaaagaatatttgcatcaaa-------tattccttttcaaaatatatttgcatcaaatattccttcatatggtataaaaatatatttatt 27583805  T
Q  241 gtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 340  Q
    || ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  27583806 gttcataaatatatcttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaaatttgagtcatactacaa 27583905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 141 - 332
Target Start/End: Original strand, 28568556 - 28568740
Alignment:
Q  141 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttatt 240  Q
    ||||||| |||||||||||| |||||||||       |||||||||||||||||||||||||||||||| | ||||| ||| ||||||||| ||||||||    
T  28568556 ctccttcggtgaaagaatatatgcatcaaa-------tattccctttcaaaatatatttgcatcaaatcttccttcacacgatacaaaaatatatttatt 28568648  T
Q  241 gtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 332  Q
    ||||||||||||||||| |  |||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||    
T  28568649 gtccataaatatattttcaaaacaaaatatatttgaaacaaatcttttatagttttagcaacaatattcttcatctatcaaattttgagtca 28568740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 213 - 341
Target Start/End: Original strand, 27136368 - 27136504
Alignment:
Q  213 cttcatacggtacaaaaatttatttattgtccataaatatatttttag--------cacaaaatatatttgaaacaaatcttttatatttttagcaacaa 304  Q
    ||||||||||||||||||| |||||||| ||||||||||||||| ||         |||||||||||||||||||||||||||||||||||||||| |||    
T  27136368 cttcatacggtacaaaaatatatttattttccataaatatatttatatattttcaacacaaaatatatttgaaacaaatcttttatatttttagcaccaa 27136467  T
Q  305 tattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||| ||||||||||||||||||||||||||||    
T  27136468 tattcttcatccatcaaattttgagtcatactacaac 27136504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 247 - 335
Target Start/End: Original strand, 34575608 - 34575696
Alignment:
Q  247 aaatatatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatac 335  Q
    ||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  34575608 aaatatattttcagcacaaaatatatttagaacaaatcttttatatttttagcaacaatattcttcatccatcaaattttgagtcatac 34575696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 176 - 332
Target Start/End: Complemental strand, 15693755 - 15693583
Alignment:
Q  176 aatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttt-----------------t 258  Q
    ||||| |||||| ||||||||||||||||||||| | ||||||||||||||||||| ||||||||| |||||||||||||||                      
T  15693755 aatatcccctttaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatatttattgcccataaatatattttcagcaacaagtttttgga 15693656  T
Q  259 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 332  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||| |||||    
T  15693655 agcacaaaatatatttgaaacaaatc-tttatatttttagcaacaatattattcatccatcaaattttaagtca 15693583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 267 - 332
Target Start/End: Complemental strand, 28568411 - 28568346
Alignment:
Q  267 atatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 332  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  28568411 atatatttgaaacaaatcttttatatttttaacaacaatattcttcatccatcaaattttgagtca 28568346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 259 - 332
Target Start/End: Original strand, 41303549 - 41303623
Alignment:
Q  259 agcacaaaatatatttgaaacaaatcttttata-tttttagcaacaatattcttcttccatcaaattttgagtca 332  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||| |||||||    
T  41303549 agcacaaaatatatttgaaacaaatcttttatattttttagcaacaatcttcttcatccatcaaattctgagtca 41303623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 19007643 - 19007592
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  19007643 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggttta 19007592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 191 - 262
Target Start/End: Complemental strand, 39287042 - 39286971
Alignment:
Q  191 aatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagca 262  Q
    ||||||||||||||||||| |  |||||| ||||||||||| ||||||||||||||||||||||||| ||||    
T  39287042 aatatatttgcatcaaatcttcattcatatggtacaaaaatatatttattgtccataaatatattttaagca 39286971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 6264397 - 6264473
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 74  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||| |||||||   || |||||||||||||||||    
T  6264397 ttgttgttgcctttctaaacctttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttata 6264473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 40032310 - 40032386
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 74  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||| |   || |||||||||||||||||    
T  40032310 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttata 40032386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 31733017 - 31733068
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  31733017 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaatgttta 31733068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 22287588 - 22287664
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 74  Q
    |||||||||||||||||||||||||||||||||||||  ||||||| ||||| |   || |||||||||||||||||    
T  22287588 ttgttgttgcctttctaaacccttgtttcagccccctatatctcaaagtttactttaatacaaggtctatatttata 22287664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 24162464 - 24162514
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  24162464 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagttt 24162514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 141 - 208
Target Start/End: Original strand, 34575528 - 34575588
Alignment:
Q  141 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaat 208  Q
    ||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||    
T  34575528 ctccttcagtgaaagaatatttgcatcaaa-------tattccctttcaaaatatatttgcatcaaat 34575588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 11739812 - 11739863
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||| ||||||||||||||||| |||||||||| |||||||||||||    
T  11739812 ttgttgttgtctttctaaacccttgttccagccccctctatctcaaggttta 11739863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 13910296 - 13910339
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  13910296 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 13910339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 17849120 - 17849069
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||  |||||||||||||||||||||||||||| |||||||||||||    
T  17849120 ttgttgttatctttctaaacccttgtttcagccccctctatctcaaggttta 17849069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 19504597 - 19504640
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  19504597 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 19504640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 22163199 - 22163250
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||| |||||    
T  22163199 ttgttgttgcctttctaaatccttgtttcagccccctctatctcaaagttta 22163250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 28196640 - 28196589
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||| |||||    
T  28196640 ttgttgttgcctttctaaacctttgtttcagccccctctatctcaatgttta 28196589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 38020205 - 38020162
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  38020205 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 38020162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 7502723 - 7502642
Alignment:
Q  176 aatattccctttcaaaatatatttgcatcaaatcgttct-tcatacggtacaaaaatttatttattgtccataaatatatttt 257  Q
    |||||| ||||| ||||||||||||||||||||| |||| ||||||  ||||||||| | |||||||| ||||||||||||||    
T  7502723 aatatttcctttaaaaatatatttgcatcaaatc-ttctgtcatacaatacaaaaatatttttattgttcataaatatatttt 7502642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 27104802 - 27104752
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||| ||||    
T  27104802 ttgttgttgcctttctgaacccttgtttcagccccctctatctcaaagttt 27104752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 23452489 - 23452526
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctc 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  23452489 ttgttgttgcctttctaaacccttgtttcagccccctc 23452526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 305
Target Start/End: Complemental strand, 39286952 - 39286911
Alignment:
Q  264 aaaatatatttgaaacaaatcttttatatttttagcaacaat 305  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  39286952 aaaatatatttgaaacaaatcatttatatttttagcaacaat 39286911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 257
Target Start/End: Original strand, 41303457 - 41303530
Alignment:
Q  184 ctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttt 257  Q
    |||| |||||||||||| ||||| || | ||||| ||||||||||| | |||||| ||||||||||||||||||    
T  41303457 ctttaaaaatatatttgaatcaattcttccttcacacggtacaaaattatatttactgtccataaatatatttt 41303530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 34979834 - 34979882
Alignment:
Q  4 ttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  34979834 ttgttacctttctaaacgcttgtttcagccccctctatctcaaggttta 34979882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 37963190 - 37963230
Alignment:
Q  12 tttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  37963190 tttctaaacccttgtttcagccccctctatctcaaggttta 37963230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 183 - 255
Target Start/End: Original strand, 41304806 - 41304877
Alignment:
Q  183 cctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatt 255  Q
    ||||| ||||||||||||||||||||| | |||||||  |||||||||| |||||| | ||||||||||||||    
T  41304806 cctttaaaaatatatttgcatcaaatcttccttcata-tgtacaaaaatatatttactatccataaatatatt 41304877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 3022166 - 3022115
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||| |||||||||||||||||| |||  |||||||||||||    
T  3022166 ttgttgttgcctttataaacccttgtttcagcctcctatatctcaaggttta 3022115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 5377681 - 5377724
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    ||||||||||||||||||||||||||||||| |||||| |||||    
T  5377681 ttgttgttgcctttctaaacccttgtttcagtcccctctatctc 5377724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 6259070 - 6259143
Alignment:
Q  4 ttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 74  Q
    ||||||||||||||||| ||||||||| || |||| ||||||| |||||||   || |||||||||||||||||    
T  6259070 ttgttgcctttctaaactcttgtttcatcctcctctatctcaaagtttagtctaatacaaggtctatatttata 6259143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 329
Target Start/End: Complemental strand, 7502633 - 7502582
Alignment:
Q  278 acaaatcttttatatttttagcaacaatattcttcttccatcaaattttgag 329  Q
    |||||||||||||| ||| ||||||||| |||||| ||||||||||||||||    
T  7502633 acaaatcttttatactttgagcaacaatcttcttcatccatcaaattttgag 7502582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 21520945 - 21520988
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    ||||||||||||||||||||||||||||||||||| || |||||    
T  21520945 ttgttgttgcctttctaaacccttgtttcagccccatctatctc 21520988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 38020146 - 38020095
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||||||||||||||||||||| || ||||||| ||||| |||||||    
T  38020146 ttgttgttgcctttctaaacccttgttccaaccccctctatctccaggttta 38020095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 42064518 - 42064475
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||| ||||| |||||    
T  42064518 ttgttgttgcctttctaaacccttgtttcagctccctctatctc 42064475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 22407661 - 22407737
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 74  Q
    |||||||||||||||||||||||||||||||| ||||  ||||||  ||||| |   || |||||||||||||||||    
T  22407661 ttgttgttgcctttctaaacccttgtttcagcaccctatatctcacagtttactctgatacaaggtctatatttata 22407737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 332
Target Start/End: Original strand, 41304898 - 41304964
Alignment:
Q  259 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 332  Q
    ||||||||||||||||||  |||||||||||||||||||     ||| |||||| |||||||||||||||||||    
T  41304898 agcacaaaatatatttga--caaatcttttatattttta-----aatcttcttcatccatcaaattttgagtca 41304964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 35215838 - 35215875
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctc 38  Q
    |||||||||| |||||||||||||||||||||||||||    
T  35215838 ttgttgttgcttttctaaacccttgtttcagccccctc 35215875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 35218215 - 35218252
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctc 38  Q
    |||||||||| |||||||||||||||||||||||||||    
T  35218215 ttgttgttgcttttctaaacccttgtttcagccccctc 35218252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 19502263 - 19502299
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccct 37  Q
    |||||||||||||||||||| ||||||||||||||||    
T  19502263 ttgttgttgcctttctaaactcttgtttcagccccct 19502299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 14837276 - 14837225
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||| |||| | ||||||||||||||| ||||| |||||||||||||    
T  14837276 ttgttgttgtcttttttaacccttgtttcagctccctctatctcaaggttta 14837225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 15539727 - 15539778
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||| | |||||||||||||||||| ||||||  |||||||||||||    
T  15539727 ttgttgttgtcattctaaacccttgtttcaaccccctatatctcaaggttta 15539778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 17848446 - 17848399
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaagg 48  Q
    ||||||||| ||||||||||||| |||| ||||||||| |||||||||    
T  17848446 ttgttgttgtctttctaaaccctcgtttgagccccctctatctcaagg 17848399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 22874134 - 22874095
Alignment:
Q  12 tttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    ||||||||||||||||||||||||||| ||||| ||||||    
T  22874134 tttctaaacccttgtttcagccccctctatctccaggttt 22874095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 43623820 - 43623863
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    ||||||||||||||||||||| |||||||| ||||||| |||||    
T  43623820 ttgttgttgcctttctaaaccattgtttcacccccctctatctc 43623863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 45280248 - 45280287
Alignment:
Q  12 tttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    ||||||||||||||||||||||||||| ||||||| ||||    
T  45280248 tttctaaacccttgtttcagccccctctatctcaaagttt 45280287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 52
Target Start/End: Original strand, 12342673 - 12342713
Alignment:
Q  13 ttctaaaccctt-gtttcagccccctccatctcaaggttta 52  Q
    |||||||||||| |||||||||||||| |||||||||||||    
T  12342673 ttctaaaccctttgtttcagccccctctatctcaaggttta 12342713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 191; Significance: 1e-103; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 1 - 341
Target Start/End: Complemental strand, 79221 - 78884
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactc 97  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||| |||| |   ||||||||||||||||||||        ||||| |||||||||    
T  79221 ttgttgttgcctttctaaacccttgttttagccccctctatctcaagttttactctgattcaaggtctatatttata--------gtaaaggtataactc 79130  T
Q  98 ataaatttggaacagataccacactaaaagatacnnnnnnnnn---ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaata 194  Q
    |||||||||||||  |||||||||| || |||||            ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  79129 ataaatttggaacgaataccacactgaa-gatacattttttttttcctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaata 79031  T
Q  195 tatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatattt 294  Q
    |||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  79030 tatttgcatcaaatcgttcttcatacagtacaaaaatatatttattatccataaatatatttttagcagaaaatatatttgagacaaatcttttatattt 78931  T
Q  295 ttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||||||||||| | ||||||||||||| ||||||||||||||    
T  78930 ttagcaacaatattctccatccatcaaattttaagtcatactacaac 78884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 191; Significance: 1e-103; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 73 - 337
Target Start/End: Complemental strand, 15809231 - 15808967
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 171  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||          |||||||||||||||||||||||||||||||    
T  15809231 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gatacgtttttttttctccttcagtgaaagaatatttgcatcaaaa 15809133  T
Q  172 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatata 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| | |||||||||||    
T  15809132 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcaacacaaaatata 15809033  T
Q  272 tttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatacta 337  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  15809032 tttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatacta 15808967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 73 - 341
Target Start/End: Original strand, 28283544 - 28283812
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 171  Q
    ||||||||||||||||||||||||||||||||||||||| |||  ||||| || |||||          |||||||||||||||||||||||||||||||    
T  28283544 tatatttatagtaaaagtataactcataaatttggaacaaatattacactgaa-gatacgtttttttttctccttcagtgaaagaatatttgcatcaaaa 28283642  T
Q  172 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatata 271  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  28283643 atataatattcactttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatata 28283742  T
Q  272 tttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||    
T  28283743 tttgaaacaaatcttttatatttttagcaaaaatattctccatccatcaaattttgagtcatactacaac 28283812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 73 - 341
Target Start/End: Complemental strand, 43530140 - 43529872
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 171  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||| || |||||          ||||||||||||||||||||| |||| ||||    
T  43530140 tatatttatagtaaaagtataactcataaatttggaataaataccacactgaa-gatacttttttttttctccttcagtgaaagaatattagcataaaaa 43530042  T
Q  172 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatata 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  43530041 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttcagcacaaaatata 43529942  T
Q  272 tttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  43529941 tttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaac 43529872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 73 - 341
Target Start/End: Complemental strand, 3874022 - 3873751
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn---ctccttcagtgaaagaatatttgcatcaa 169  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||  || ||||             |||||||||||||||||||||||||||||    
T  3874022 tatatttatagtaaaagtataactcataaatttggaacaaataccacaccgaa-gatatgtttttttttttctccttcagtgaaagaatatttgcatcaa 3873924  T
Q  170 aaatataatattccctttcaaaatatatttgcatcaaatcgtt-cttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaat 268  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||    
T  3873923 aaatataatattctctttcaaaatatatttgcatcaaatcgtttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaat 3873824  T
Q  269 atatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  3873823 atatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaac 3873751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 341
Target Start/End: Complemental strand, 41382756 - 41382420
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactc 97  Q
    ||||||||| | |||||||||||||||| |||||| || ||||||||||||| |   ||||||||||||||||||||        |||||||||||||||    
T  41382756 ttgttgttgtcattctaaacccttgttttagccccatctatctcaaggtttactctgattcaaggtctatatttata--------gtaaaagtataactc 41382665  T
Q  98 ataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatat 195  Q
    |||||||||||||  |||||||||| || |||||           ||| |||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  41382664 ataaatttggaacgaataccacactgaa-gatacgttttttttttctcattcagtgaaagaatatttgcataaaaaatataatatttcctttcaaaatat 41382566  T
Q  196 atttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttt 295  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| || | |||||||||| |||||||||||||||||||||    
T  41382565 atttgcatcaaatcgttgttcatacggtacaaaaatatatttattgtccataaatatattttcagtataaaatatattcgaaacaaatcttttatatttt 41382466  T
Q  296 tagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    || |||||||||||| | ||||||||||||||||||||||||||||    
T  41382465 taacaacaatattctccatccatcaaattttgagtcatactacaac 41382420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 1 - 341
Target Start/End: Complemental strand, 41384827 - 41384494
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactc 97  Q
    ||||||||| | ||||||||||||||||||||||| || |||||||  |||| |   ||||||||||||||||        |||||||||||||||||||    
T  41384827 ttgttgttgtcattctaaacccttgtttcagcccc-tctatctcaatttttactttgattcaaggtctatatt--------tatagtaaaagtataactc 41384737  T
Q  98 ataaatttggaacagataccacactaaaagatac-nnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatata 196  Q
    |||||||||||||  ||||||||||  |||||||           ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  41384736 ataaatttggaacgaataccacact-gaagatacgtttttttttttccttcaatgaaagaatatttgcat-aaaaatataatattccctttcaaaatata 41384639  T
Q  197 tttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatattttt 296  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || | |||||||||| ||||||||||||||||||||||    
T  41384638 tttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagtataaaatatattcgaaacaaatcttttatattttt 41384539  T
Q  297 agcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||||||||| | ||||||||||||||||||||||||||||    
T  41384538 agcaacaatattctccatccatcaaattttgagtcatactacaac 41384494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 141 - 341
Target Start/End: Complemental strand, 608671 - 608471
Alignment:
Q  141 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttatt 240  Q
    |||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||    
T  608671 ctccttcagtgaaagaatatttgcataaaatatataatattctctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttatt 608572  T
Q  241 gtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 340  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  608571 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtgatactacaa 608472  T
Q  341 c 341  Q
    |    
T  608471 c 608471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 184 - 341
Target Start/End: Complemental strand, 32339252 - 32339095
Alignment:
Q  184 ctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaat 283  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  32339252 ctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaat 32339153  T
Q  284 cttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  32339152 cttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaac 32339095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 233 - 341
Target Start/End: Original strand, 3265643 - 3265751
Alignment:
Q  233 tatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 332  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  3265643 tatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 3265742  T
Q  333 tactacaac 341  Q
    |||||||||    
T  3265743 tactacaac 3265751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 181617 - 181434
Alignment:
Q  4 ttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactcata 100  Q
    |||||||| |||||| ||||||||||||||||||| ||||||| |||||||   || ||| |||||||||||||        ||||||||||||||||||    
T  181617 ttgttgccattctaagcccttgtttcagccccctctatctcaaagtttagtctgatacaaagtctatatttata--------gtaaaagtataactcata 181526  T
Q  101 aatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaa 191  Q
    ||||||||||  |||||||||| || |||||           |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  181525 aatttggaacgaataccacactgaa-gatacgtttttttcttctcctttagtgaaagaatatttgcatcaaaaatataatattccctttcaaa 181434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 15072793 - 15072717
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 74  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||   || |||||||||||||||||    
T  15072793 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttata 15072717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 188 - 332
Target Start/End: Original strand, 13986214 - 13986374
Alignment:
Q  188 caaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttt--------------tag---cacaaaatat 270  Q
    |||||||||||||||||||||| |  ||||| ||||||||||||||||| | | ||||||||||||||||              |||   ||||||||||    
T  13986214 caaaatatatttgcatcaaatcttctttcatgcggtacaaaaatttattaactatccataaatatattttcaacaacaatcttctagaaccacaaaatat 13986313  T
Q  271 atttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 332  Q
    |||| |||||||||||| ||||||||||||||||| |||||| ||||| |||||||||||||    
T  13986314 atttaaaacaaatcttt-atatttttagcaacaatcttcttcatccataaaattttgagtca 13986374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 32339392 - 32339272
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc----aaggtttagt---attcaaggtctatatttatatatttatagtaaaagtata 93  Q
    |||||||||||||||||||||||||||||||||||||| |||||    || ||||||    || |||||||||||||||||        |||||||||||    
T  32339392 ttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttata--------gtaaaagtata 32339301  T
Q  94 actcataaatttggaacagataccacact 122  Q
    |||||||||||||||||| ||||||||||    
T  32339300 actcataaatttggaacaaataccacact 32339272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 5622990 - 5623041
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  5622990 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggttta 5623041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 27107149 - 27107200
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  27107149 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggttta 27107200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 37214462 - 37214513
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  37214462 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggttta 37214513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 26775284 - 26775234
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  26775284 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggttt 26775234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 35872632 - 35872681
Alignment:
Q  3 gttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  35872632 gttgttgcctttctaaacccttgtttcagccccctctatctcaaggttta 35872681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 14419446 - 14419494
Alignment:
Q  4 ttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  14419446 ttgttgcctttctaaacccttgtttcagccccctctatctcaaggttta 14419494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 1225249 - 1225198
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  1225249 ttgttgttgtctttctaaacccttgtttcagccccctctatctcaaggttta 1225198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 13858736 - 13858787
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  13858736 ttgttgttgcctttctaaacccttgtttcatccccctctatctcaaggttta 13858787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 25952601 - 25952554
Alignment:
Q  4 ttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  25952601 ttgttgcctttctaaacccttgtttcagccccctctatctcaaggttt 25952554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 261 - 332
Target Start/End: Original strand, 30679186 - 30679256
Alignment:
Q  261 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 332  Q
    |||||||||||| | ||||||||||||| |||||||| |||| ||||||||| |||||||||||||||||||    
T  30679186 cacaaaatatatctaaaacaaatcttttttatttttaccaac-atattcttcatccatcaaattttgagtca 30679256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 33541640 - 33541691
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  33541640 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaatgttta 33541691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 36865621 - 36865570
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  36865621 ttgttgttgcctttctaaacccttgtttcagccccctctatcttaaggttta 36865570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 3886170 - 3886220
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  3886170 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagttt 3886220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 14477359 - 14477309
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  14477359 ttgttgttgcctttctaaacccttgtttcaaccccctctatctcaaggttt 14477309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 14807834 - 14807784
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  14807834 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagttt 14807784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 44720926 - 44720876
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  44720926 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagttt 44720876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 24873506 - 24873555
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacact 122  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  24873506 tatatttatagtaaaagtataactcataaatttggaacaaatacaacact 24873555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 15068064 - 15068012
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttag 53  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| ||||||    
T  15068064 ttgttgttgcctttctaaacccttgtttcagccccttctatctcaaagtttag 15068012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 11701364 - 11701447
Alignment:
Q  176 aatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagca 262  Q
    |||||||||||| ||||||||||| |||||| || |||  |||||||||||||||| |||||| || ||||||||||||||| ||||    
T  11701364 aatattccctttaaaaatatatttacatcaattc-ttc--catacggtacaaaaatatatttactgaccataaatatattttcagca 11701447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 12517276 - 12517319
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  12517276 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 12517319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 18810791 - 18810748
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  18810791 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 18810748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 27827069 - 27827026
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  27827069 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 27827026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 27829380 - 27829337
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  27829380 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 27829337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 27911097 - 27911047
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  27911097 ttgttgttgcctt-ctaaacccttgtttcagccccctctatctcaaggttta 27911047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 27957516 - 27957466
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  27957516 ttgttgttgcctt-ctaaacccttgtttcagccccctctatctcaaggttta 27957466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 30480755 - 30480806
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||||||||| |||| || |||||||||||||    
T  30480755 ttgttgttgcctttctaaacccttgtttcaaccccttctatctcaaggttta 30480806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 4424101 - 4424051
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||| ||||    
T  4424101 ttgttgttgcctttctaaatccttgtttcagccccctctatctcaaagttt 4424051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 24873433 - 24873470
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctc 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24873433 ttgttgttgcctttctaaacccttgtttcagccccctc 24873470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 15809302 - 15809266
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccct 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  15809302 ttgttgttgcctttctaaacccttgtttcagccccct 15809266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 608817 - 608774
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||| ||||||||||||||||||||||||||| |||||    
T  608817 ttgttgttgcatttctaaacccttgtttcagccccctctatctc 608774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 5372430 - 5372480
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||| ||||    
T  5372430 ttgttgttgcctttctaaacccttgtttcag-cccctctatctcaagattta 5372480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 18812976 - 18812933
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    ||||||||||||||||||||||||||||||||| |||| |||||    
T  18812976 ttgttgttgcctttctaaacccttgtttcagcctcctctatctc 18812933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 43082056 - 43082013
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||| ||||||||||||||||||||||||||| |||||    
T  43082056 ttgttgttgcttttctaaacccttgtttcagccccctctatctc 43082013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 28251819 - 28251895
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 74  Q
    ||||||||||| |||||||||||||||||| ||| ||| ||||||| ||||| |   || |||||||||||||||||    
T  28251819 ttgttgttgccattctaaacccttgtttcaacccactctatctcaaagtttactatgatacaaggtctatatttata 28251895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 28283471 - 28283508
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctc 38  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  28283471 ttgttgttgccattctaaacccttgtttcagccccctc 28283508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 11701435 - 11701479
Alignment:
Q  288 tatatttttagcaacaatattcttcttccatcaaattttgagtca 332  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||    
T  11701435 tatattttcagcaacaatcttcttcgtccatcaaattttgagtca 11701479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 21480586 - 21480546
Alignment:
Q  12 tttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||||||||||||||||||||| || |||||||||||||    
T  21480586 tttctaaacccttgtttcagccccatctatctcaaggttta 21480546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 3874093 - 3874058
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccc 36  Q
    ||||||||| ||||||||||||||||||||||||||    
T  3874093 ttgttgttgtctttctaaacccttgtttcagccccc 3874058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 22684908 - 22684951
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    ||||||||| ||||||||||||||||||||||| |||| |||||    
T  22684908 ttgttgttgtctttctaaacccttgtttcagcctcctctatctc 22684951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 43079685 - 43079650
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccc 36  Q
    |||||||||| |||||||||||||||||||||||||    
T  43079685 ttgttgttgcttttctaaacccttgtttcagccccc 43079650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 38
Target Start/End: Complemental strand, 43530209 - 43530174
Alignment:
Q  3 gttgttgcctttctaaacccttgtttcagccccctc 38  Q
    |||||||| |||||||||||||||||||||||||||    
T  43530209 gttgttgcttttctaaacccttgtttcagccccctc 43530174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 3005889 - 3005930
Alignment:
Q  12 tttctaaacccttgtttc-agccccctccatctcaaggttta 52  Q
    |||||||||||||||||| ||||||||| |||||||||||||    
T  3005889 tttctaaacccttgtttccagccccctctatctcaaggttta 3005930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 290
Target Start/End: Original strand, 27820149 - 27820178
Alignment:
Q  261 cacaaaatatatttgaaacaaatcttttat 290  Q
    ||||||||||||||||||||||||||||||    
T  27820149 cacaaaatatatttgaaacaaatcttttat 27820178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 177; Significance: 2e-95; HSPs: 2)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 73 - 341
Target Start/End: Complemental strand, 2005 - 1736
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 170  Q
    |||||||||||| ||||||||||| |||||||||||||  |||||||||| || |||||           |||||||||||||||||||||||||| |||    
T  2005 tatatttatagtgaaagtataacttataaatttggaacgaataccacactgaa-gatacgttttttttttctccttcagtgaaagaatatttgcataaaa 1907  T
Q  171 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatat 270  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  1906 aatataatattccctttcaaaatatatttgcatcaaatcttccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatat 1807  T
Q  271 atttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1806 atttgaaacaaatcttttatatttttagcaacaatattcttcttccttcaaattttgagtcatactacaac 1736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 2078 - 2042
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccct 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  2078 ttgttgttgcctttctaaacccttgtttcagccccct 2042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 104; Significance: 8e-52; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 194 - 341
Target Start/End: Complemental strand, 4694 - 4547
Alignment:
Q  194 atatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatatt 293  Q
    ||||||||||||||| || |||||||| |||||||||| ||| ||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||    
T  4694 atatttgcatcaaattgtccttcatacagtacaaaaatatatatattgtccataaatatattttcagcacgaaatatattcgaaacaaatcttttatatt 4595  T
Q  294 tttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    ||||||||||||||||||| ||||||||||||||||| ||||| ||||    
T  4594 tttagcaacaatattcttcatccatcaaattttgagttatactgcaac 4547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 99; Significance: 8e-49; HSPs: 2)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 227 - 341
Target Start/End: Original strand, 2070 - 2184
Alignment:
Q  227 aaaatttatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaatttt 326  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  2070 aaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttt 2169  T
Q  327 gagtcatactacaac 341  Q
    |||||||||||||||    
T  2170 gagtcatactacaac 2184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 141 - 199
Target Start/End: Original strand, 2022 - 2080
Alignment:
Q  141 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatattt 199  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2022 ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatattt 2080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 248 - 341
Target Start/End: Original strand, 1 - 94
Alignment:
Q  248 aatatatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 341  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  1 aatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaac 94  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 4033 - 3957
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 74  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||   || |||||||||||||||||    
T  4033 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttata 3957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 257
Target Start/End: Original strand, 57836 - 57903
Alignment:
Q  189 aaaatatatttgcatcaaatcgttcttcatacggtacaaaaatttatttattgtccataaatatatttt 257  Q
    ||||||||||||||||||||  ||||||||||||||||||||| |||||||||| |||| |||||||||    
T  57836 aaaatatatttgcatcaaatt-ttcttcatacggtacaaaaatatatttattgttcatacatatatttt 57903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 332
Target Start/End: Original strand, 57926 - 57995
Alignment:
Q  261 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 332  Q
    ||||||| |||| | |||||||||||||||| |||||| ||||  |||| || |||||||||||||||||||    
T  57926 cacaaaaaatatataaaacaaatcttttatacttttagaaaca--attcatcatccatcaaattttgagtca 57995  T

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Target: scaffold0250 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 2916 - 2866
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  2916 ttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagttt 2866  T

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Target: scaffold0004 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 79892 - 79844
Alignment:
Q  4 ttgttgcctttctaaacccttgtttcagccccctccatctcaaggttta 52  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||    
T  79892 ttgttgtctttctaaacccttgtttcagccccctctatctcaaggttta 79844  T

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Target: scaffold0038 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 41735 - 41778
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  41735 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 41778  T

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Target: scaffold0025 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 69543 - 69586
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  69543 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 69586  T

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Target: scaffold0025; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 73275 - 73318
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  73275 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 73318  T

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Target: scaffold0552 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 1083 - 1133
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| ||||    
T  1083 ttgttgttgcctttctaaacccttgtttcagccccttctatctcaaagttt 1133  T

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Target: scaffold0472 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 6232 - 6185
Alignment:
Q  4 ttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    ||||||| ||||||||||||||||||||||||||| ||||||| ||||    
T  6232 ttgttgcttttctaaacccttgtttcagccccctctatctcaaagttt 6185  T

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Target: scaffold0267 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 77 - 34
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||| ||||||||||||||||||||||||||| |||||    
T  77 ttgttgttgcttttctaaacccttgtttcagccccctctatctc 34  T

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Target: scaffold0068 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 29207 - 29164
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctc 44  Q
    |||||||||||||| ||||||||||||||||||||||| |||||    
T  29207 ttgttgttgcctttttaaacccttgtttcagccccctctatctc 29164  T

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Target: scaffold0131 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 15055 - 15005
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagccccctccatctcaaggttt 51  Q
    ||||||||||||||||||| | |||||||||||||||| ||||||| ||||    
T  15055 ttgttgttgcctttctaaatcattgtttcagccccctctatctcaaagttt 15005  T

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Target: scaffold0533 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 305
Target Start/End: Original strand, 2232 - 2273
Alignment:
Q  264 aaaatatatttgaaacaaatcttttatatttttagcaacaat 305  Q
    ||||||||||||||||||||||||||||||||  ||||||||    
T  2232 aaaatatatttgaaacaaatcttttatattttctgcaacaat 2273  T

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Target: scaffold0011 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 35675 - 35644
Alignment:
Q  1 ttgttgttgcctttctaaacccttgtttcagc 32  Q
    ||||||||||||||||||||||||||||||||    
T  35675 ttgttgttgcctttctaaacccttgtttcagc 35644  T

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Target: scaffold0474 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0474
Description:

Target: scaffold0474; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 332
Target Start/End: Complemental strand, 10493 - 10443
Alignment:
Q  282 atcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 332  Q
    |||||||||||||||| ||||||| || ||  |||||||||||||||||||    
T  10493 atcttttatatttttaacaacaatcttttttatccatcaaattttgagtca 10443  T

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Target: scaffold0224 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 111
Target Start/End: Original strand, 16137 - 16175
Alignment:
Q  73 tatatttatagtaaaagtataactcataaatttggaaca 111  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  16137 tatatttatagtaaaagtatccctcataaatttggaaca 16175  T

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