View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17406_high_1 (Length: 528)

Name: NF17406_high_1
Description: NF17406
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17406_high_1
NF17406_high_1
[»] chr7 (23 HSPs)
chr7 (73-512)||(49009666-49010105)
chr7 (19-74)||(49010175-49010230)
chr7 (19-68)||(3113791-3113840)
chr7 (19-68)||(5555911-5555960)
chr7 (19-68)||(14776776-14776825)
chr7 (19-68)||(33686010-33686059)
chr7 (19-68)||(36658626-36658675)
chr7 (19-68)||(40919692-40919741)
chr7 (19-68)||(43184139-43184188)
chr7 (19-66)||(34388751-34388798)
chr7 (19-68)||(7003172-7003221)
chr7 (19-68)||(7049043-7049092)
chr7 (19-68)||(8867402-8867451)
chr7 (19-66)||(11020700-11020747)
chr7 (19-70)||(13072531-13072582)
chr7 (19-69)||(20606071-20606121)
chr7 (31-68)||(8394574-8394611)
chr7 (19-68)||(36631265-36631314)
chr7 (19-66)||(32199136-32199183)
chr7 (21-68)||(33387046-33387093)
chr7 (19-69)||(20609364-20609414)
chr7 (19-69)||(20611853-20611903)
chr7 (32-64)||(45709965-45709997)
[»] chr5 (26 HSPs)
chr5 (19-69)||(30297623-30297673)
chr5 (19-68)||(10034351-10034400)
chr5 (19-68)||(12278527-12278576)
chr5 (19-68)||(31680814-31680863)
chr5 (19-68)||(33430768-33430817)
chr5 (19-68)||(39435145-39435194)
chr5 (20-68)||(31271854-31271902)
chr5 (20-63)||(23034427-23034470)
chr5 (19-66)||(26282987-26283034)
chr5 (22-69)||(38269083-38269130)
chr5 (19-69)||(192353-192403)
chr5 (19-68)||(1776045-1776094)
chr5 (19-68)||(13818426-13818475)
chr5 (19-68)||(31501389-31501438)
chr5 (19-68)||(36293290-36293339)
chr5 (19-68)||(39657200-39657249)
chr5 (19-66)||(37255054-37255101)
chr5 (19-69)||(11779232-11779282)
chr5 (26-68)||(16155446-16155488)
chr5 (19-68)||(16333570-16333619)
chr5 (19-68)||(17332290-17332339)
chr5 (30-68)||(15959627-15959665)
chr5 (25-59)||(23034262-23034296)
chr5 (19-65)||(33094355-33094401)
chr5 (24-65)||(22761177-22761218)
chr5 (20-69)||(35911402-35911451)
[»] chr3 (18 HSPs)
chr3 (19-74)||(38282857-38282912)
chr3 (19-68)||(6269095-6269144)
chr3 (19-68)||(6503240-6503289)
chr3 (19-68)||(19390595-19390644)
chr3 (19-68)||(22968113-22968162)
chr3 (19-68)||(39772239-39772288)
chr3 (19-68)||(40081410-40081459)
chr3 (19-68)||(5135735-5135784)
chr3 (19-68)||(6930564-6930613)
chr3 (19-68)||(34083789-34083838)
chr3 (19-68)||(45183428-45183477)
chr3 (19-74)||(38415479-38415534)
chr3 (26-64)||(29564830-29564868)
chr3 (19-68)||(8257275-8257324)
chr3 (29-68)||(27935624-27935663)
chr3 (32-74)||(40368673-40368715)
chr3 (19-68)||(33041400-33041448)
chr3 (19-63)||(27912456-27912500)
[»] scaffold0041 (1 HSPs)
scaffold0041 (19-68)||(53354-53403)
[»] scaffold0002 (1 HSPs)
scaffold0002 (19-68)||(480126-480175)
[»] chr8 (19 HSPs)
chr8 (19-68)||(378871-378920)
chr8 (19-68)||(2728864-2728913)
chr8 (19-68)||(4404455-4404504)
chr8 (19-68)||(15838734-15838783)
chr8 (19-68)||(16787696-16787745)
chr8 (19-68)||(29728051-29728100)
chr8 (19-68)||(34136472-34136521)
chr8 (19-68)||(39914963-39915012)
chr8 (19-68)||(42231384-42231433)
chr8 (19-68)||(3648463-3648512)
chr8 (19-68)||(9175581-9175630)
chr8 (19-68)||(9877667-9877716)
chr8 (19-68)||(40470212-40470261)
chr8 (19-68)||(19034-19083)
chr8 (19-68)||(23402555-23402604)
chr8 (19-58)||(7278480-7278519)
chr8 (19-69)||(32540135-32540185)
chr8 (21-66)||(40401179-40401224)
chr8 (32-68)||(3672291-3672327)
[»] chr6 (12 HSPs)
chr6 (19-68)||(399066-399115)
chr6 (19-68)||(18339541-18339590)
chr6 (19-68)||(28997177-28997226)
chr6 (19-66)||(34948452-34948499)
chr6 (19-68)||(33229006-33229056)
chr6 (19-68)||(13838245-13838294)
chr6 (19-69)||(10231747-10231797)
chr6 (31-69)||(12850063-12850101)
chr6 (19-68)||(29743731-29743781)
chr6 (29-74)||(4335203-4335248)
chr6 (28-69)||(12098436-12098477)
chr6 (26-66)||(29341488-29341528)
[»] chr4 (30 HSPs)
chr4 (19-68)||(3292567-3292616)
chr4 (19-68)||(6235957-6236006)
chr4 (19-68)||(17510902-17510951)
chr4 (19-68)||(20129762-20129811)
chr4 (19-68)||(25931157-25931206)
chr4 (19-68)||(26438948-26438997)
chr4 (19-68)||(34406953-34407002)
chr4 (19-68)||(36382016-36382065)
chr4 (19-68)||(43143255-43143304)
chr4 (19-68)||(43356353-43356402)
chr4 (19-68)||(47501222-47501271)
chr4 (19-66)||(13394912-13394959)
chr4 (19-68)||(6689906-6689955)
chr4 (19-68)||(13012637-13012686)
chr4 (19-68)||(28876985-28877034)
chr4 (19-68)||(35546400-35546449)
chr4 (19-68)||(40529464-40529513)
chr4 (19-68)||(48130425-48130474)
chr4 (19-68)||(48989776-48989825)
chr4 (19-68)||(50204748-50204797)
chr4 (29-68)||(26448499-26448538)
chr4 (19-66)||(33136115-33136162)
chr4 (19-69)||(9415345-9415395)
chr4 (19-69)||(29094594-29094644)
chr4 (19-68)||(42333445-42333495)
chr4 (19-68)||(10352554-10352604)
chr4 (19-68)||(29995653-29995703)
chr4 (19-68)||(30077306-30077356)
chr4 (20-68)||(1818164-1818213)
chr4 (29-69)||(31853673-31853713)
[»] chr2 (24 HSPs)
chr2 (19-68)||(6403473-6403522)
chr2 (19-68)||(12756508-12756557)
chr2 (19-68)||(17444710-17444759)
chr2 (19-68)||(31581290-31581339)
chr2 (19-68)||(41251303-41251352)
chr2 (19-68)||(45419030-45419079)
chr2 (19-66)||(7072205-7072252)
chr2 (19-66)||(32126858-32126905)
chr2 (19-68)||(2286237-2286286)
chr2 (19-68)||(2957815-2957864)
chr2 (19-68)||(18982038-18982087)
chr2 (19-68)||(21556543-21556592)
chr2 (19-68)||(35963139-35963188)
chr2 (19-68)||(44084272-44084321)
chr2 (19-66)||(4554863-4554910)
chr2 (30-68)||(8059014-8059052)
chr2 (19-68)||(816728-816777)
chr2 (19-68)||(15441855-15441904)
chr2 (19-68)||(26162373-26162422)
chr2 (19-62)||(26591496-26591539)
chr2 (19-69)||(37621732-37621782)
chr2 (28-69)||(3843993-3844034)
chr2 (35-68)||(8147799-8147832)
chr2 (19-68)||(42442433-42442482)
[»] chr1 (12 HSPs)
chr1 (19-68)||(3829430-3829479)
chr1 (19-68)||(17445741-17445790)
chr1 (21-68)||(32981728-32981775)
chr1 (19-66)||(35907977-35908024)
chr1 (19-68)||(7433869-7433918)
chr1 (19-68)||(11958020-11958069)
chr1 (19-68)||(33490153-33490202)
chr1 (19-68)||(42310610-42310659)
chr1 (19-67)||(23313443-23313491)
chr1 (19-67)||(28463396-28463444)
chr1 (31-68)||(41971940-41971977)
chr1 (27-69)||(9901670-9901712)
[»] scaffold0495 (1 HSPs)
scaffold0495 (19-69)||(8467-8517)
[»] scaffold0134 (1 HSPs)
scaffold0134 (24-69)||(17754-17799)
[»] scaffold0069 (1 HSPs)
scaffold0069 (19-63)||(18012-18056)
[»] scaffold0015 (1 HSPs)
scaffold0015 (32-68)||(2139-2175)


Alignment Details
Target: chr7 (Bit Score: 428; Significance: 0; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 428; E-Value: 0
Query Start/End: Original strand, 73 - 512
Target Start/End: Complemental strand, 49010105 - 49009666
Alignment:
Q  73 atcttaaacatgtctagaaaacaaataattcaacctcgcctatcattgattaaagcagcgaataaaaaatcttggtctctagaaatttctttttgcaaac 172  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49010105 atcttaaacatgtctagaaaataaataattcaacctcgcctatcattgattaaagcagcgaataaaaaatcttggtctctagaaatttctttttgcaaac 49010006  T
Q  173 attcacatcttacaataaaacaatattgtacatagtatagtatagcatcatatttctctgaagacaatcaattgatggctctctaagattaatggcaatg 272  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  49010005 attcatatcttacaataaaacaatattgtacatagtatagtatagcatcatatttctctgaagacaattaattgatggctctctaagattaatggcaatg 49009906  T
Q  273 ctattaacctacttgtcaatatccatgttgttgttttggatttcatttgcaatggtaaatttcacatccacaatttaattgctcaaaagtctccgaacat 372  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49009905 ctattaacctacttgtcaatatccatgttgttgttttggatttcatttgcaatggtaaatttcacatccacaatttaattgctcaaaagtctccgaacat 49009806  T
Q  373 agcctagaaaatgcacgaccatatccttcctaattctactcaaaatgactctatttattggaagcattttgaatcaaatttgttcatctttaaaaatgtt 472  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49009805 agcctagaaaatgcacgaccatatccttcctaattctactcaaaatgactctatttattggaagcattttgaatcaaatttgttcatctttaaaaatgtt 49009706  T
Q  473 tttggttatttgaatcaaccttatttgttggcctcctttg 512  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  49009705 tttggttatttgaatcaaccttatttgttggcctcctttg 49009666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 49010230 - 49010175
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatggaaaat 74  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  49010230 taaacgagagacaaattaattataaattgtttaagaaattcataattatggaaaat 49010175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 3113791 - 3113840
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  3113791 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 3113840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 5555960 - 5555911
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  5555960 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 5555911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 14776776 - 14776825
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  14776776 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 14776825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 33686059 - 33686010
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  33686059 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 33686010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 36658675 - 36658626
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  36658675 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 36658626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 40919692 - 40919741
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  40919692 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 40919741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 43184139 - 43184188
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  43184139 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 43184188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 34388751 - 34388798
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataatta 66  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  34388751 taaacgagatacaaattaattataaattgtttaagaaattcataatta 34388798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 7003221 - 7003172
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||| | ||||||||||||||||||||||||| ||||||||||||||    
T  7003221 taaacgatatacaaattaattataaattgtttaagaaattcataattatg 7003172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 7049092 - 7049043
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||| | ||||||||||||||||||||||||| ||||||||||||||    
T  7049092 taaacgatatacaaattaattataaattgtttaagaaattcataattatg 7049043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 8867402 - 8867451
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||| ||| ||||||||||||||||||||||||| ||||||||||||||    
T  8867402 taaacaagatacaaattaattataaattgtttaagaaattcataattatg 8867451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 11020700 - 11020747
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataatta 66  Q
    ||||||||| ||||||||||||||||||||||||| |||| |||||||    
T  11020700 taaacgagatacaaattaattataaattgtttaagaaatttataatta 11020747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 13072531 - 13072582
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatgga 70  Q
    ||||||||| || |||||||||| ||||||||||| ||||||||||||||||    
T  13072531 taaacgagatactaattaattatgaattgtttaagaaattcataattatgga 13072582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 20606121 - 20606071
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatgg 69  Q
    |||| |||| ||||||||||||| ||||||||||| |||||||||||||||    
T  20606121 taaatgagatacaaattaattatgaattgtttaagaaattcataattatgg 20606071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 31 - 68
Target Start/End: Complemental strand, 8394611 - 8394574
Alignment:
Q  31 aaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  8394611 aaattaattataaattgtttaagaaattcataattatg 8394574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 36631314 - 36631265
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| |||| |||||||| ||||||||||| ||||||||||||||    
T  36631314 taaacgagatacaatttaattatcaattgtttaagaaattcataattatg 36631265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 32199183 - 32199136
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataatta 66  Q
    |||||||||||||||||||||| |||||||||| | ||||| ||||||    
T  32199183 taaacgagagacaaattaattaaaaattgtttatgaaattcttaatta 32199136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 33387093 - 33387046
Alignment:
Q  21 aacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    |||||| || ||||||||||| ||||||||||| ||||||||||||||    
T  33387093 aacgagtgataaattaattatgaattgtttaagaaattcataattatg 33387046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 20609414 - 20609364
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatgg 69  Q
    |||| |||| ||||||||||||| ||| ||||||| |||||||||||||||    
T  20609414 taaatgagatacaaattaattatgaatagtttaagaaattcataattatgg 20609364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 20611903 - 20611853
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatgg 69  Q
    |||| |||| ||||||||||||| ||| ||||||| |||||||||||||||    
T  20611903 taaatgagatacaaattaattatgaatagtttaagaaattcataattatgg 20611853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 64
Target Start/End: Complemental strand, 45709997 - 45709965
Alignment:
Q  32 aattaattataaattgtttaagtaattcataat 64  Q
    |||||||||||||||||||||||||||| ||||    
T  45709997 aattaattataaattgtttaagtaattcttaat 45709965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 30297623 - 30297673
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatgg 69  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  30297623 taaacgagagacaaattaattataaattgtttaagaaattcataattatgg 30297673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 10034400 - 10034351
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  10034400 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 10034351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 12278527 - 12278576
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  12278527 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 12278576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 31680863 - 31680814
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  31680863 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 31680814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 33430817 - 33430768
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  33430817 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 33430768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 39435194 - 39435145
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  39435194 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 39435145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 31271902 - 31271854
Alignment:
Q  20 aaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  31271902 aaacgagagacaaattaattataaatggtttaagaaattcataattatg 31271854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 23034470 - 23034427
Alignment:
Q  20 aaacgagagacaaattaattataaattgtttaagtaattcataa 63  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  23034470 aaacgagagacaaattaattataaattgtttaagaaattcataa 23034427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 26282987 - 26283034
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataatta 66  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  26282987 taaacgagatacaaattaattataaattgtttaagaaattcataatta 26283034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 38269083 - 38269130
Alignment:
Q  22 acgagagacaaattaattataaattgtttaagtaattcataattatgg 69  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||    
T  38269083 acgagatacaaattaattataaattgtttaagaaattcataattatgg 38269130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 192403 - 192353
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatgg 69  Q
    |||| |||| ||||||||||||||||||||||||| |||||||||||||||    
T  192403 taaatgagatacaaattaattataaattgtttaagaaattcataattatgg 192353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 1776045 - 1776094
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||| ||||||||||||||||||||| ||||||||||||||    
T  1776045 taaacgagatacagattaattataaattgtttaagaaattcataattatg 1776094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 13818475 - 13818426
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| |||||||||||||||| |||||||| ||||||||||||||    
T  13818475 taaacgagatacaaattaattataaactgtttaagaaattcataattatg 13818426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 31501389 - 31501438
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||| ||| ||||||||||||||||||||||||| ||||||||||||||    
T  31501389 taaacaagatacaaattaattataaattgtttaagaaattcataattatg 31501438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 36293290 - 36293339
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| |||||||||||||||||| |||||| ||||||||||||||    
T  36293290 taaacgagatacaaattaattataaattatttaagaaattcataattatg 36293339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 39657200 - 39657249
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||  ||||||||||||||    
T  39657200 taaacgagatacaaattaattataaattgtttaataaattcataattatg 39657249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 37255101 - 37255054
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataatta 66  Q
    ||||||||| |||||||||||||||||| |||||| ||||||||||||    
T  37255101 taaacgagatacaaattaattataaattatttaagaaattcataatta 37255054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 11779232 - 11779282
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatgg 69  Q
    |||||||| |||||||||||||| ||||||||||  |||||||||||||||    
T  11779232 taaacgagcgacaaattaattatgaattgtttaaaaaattcataattatgg 11779282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 16155488 - 16155446
Alignment:
Q  26 gagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    |||||||||||||||||||||| ||||| ||||||||||||||    
T  16155488 gagacaaattaattataaattggttaagaaattcataattatg 16155446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 16333570 - 16333619
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||| ||| |||||||||||||||||| |||||| ||||||||||||||    
T  16333570 taaacaagatacaaattaattataaattttttaagaaattcataattatg 16333619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 17332290 - 17332339
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||| ||| ||||||||||||||||||| ||||| ||||||||||||||    
T  17332290 taaacaagatacaaattaattataaattgcttaagaaattcataattatg 17332339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 30 - 68
Target Start/End: Original strand, 15959627 - 15959665
Alignment:
Q  30 caaattaattataaattgtttaagtaattcataattatg 68  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  15959627 caaattaattataaattgattaagaaattcataattatg 15959665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 59
Target Start/End: Complemental strand, 23034296 - 23034262
Alignment:
Q  25 agagacaaattaattataaattgtttaagtaattc 59  Q
    ||||||||||||||||||||||||||||| |||||    
T  23034296 agagacaaattaattataaattgtttaagaaattc 23034262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 33094401 - 33094355
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataatt 65  Q
    ||||||||||| ||||||||||| ||||||||||  |||||||||||    
T  33094401 taaacgagagaaaaattaattatgaattgtttaataaattcataatt 33094355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 22761218 - 22761177
Alignment:
Q  24 gagagacaaattaattataaattgtttaagtaattcataatt 65  Q
    |||||||||||||||| | ||||||||||| |||||||||||    
T  22761218 gagagacaaattaattctgaattgtttaagaaattcataatt 22761177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 35911402 - 35911451
Alignment:
Q  20 aaacgagagacaaattaattataaattgtttaagtaattcataattatgg 69  Q
    ||||||||||  |||||| ||| ||||||||||| |||||||||||||||    
T  35911402 aaacgagagatgaattaactatgaattgtttaagaaattcataattatgg 35911451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 8e-16; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 38282912 - 38282857
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatggaaaat 74  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||    
T  38282912 taaacgagatacaaattaattataaattgtttaagaaattcataattatgggaaat 38282857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 6269095 - 6269144
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  6269095 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 6269144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 6503240 - 6503289
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  6503240 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 6503289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 19390644 - 19390595
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  19390644 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 19390595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 22968113 - 22968162
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  22968113 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 22968162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 39772288 - 39772239
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  39772288 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 39772239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 40081410 - 40081459
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  40081410 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 40081459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 5135784 - 5135735
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    |||| |||| ||||||||||||||||||||||||| ||||||||||||||    
T  5135784 taaatgagatacaaattaattataaattgtttaagaaattcataattatg 5135735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 6930564 - 6930613
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| | ||||||||||||    
T  6930564 taaacgagatacaaattaattataaattgtttaagaagttcataattatg 6930613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 34083789 - 34083838
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| | ||||||||||||||||||||||| ||||||||||||||    
T  34083789 taaacgagatataaattaattataaattgtttaagaaattcataattatg 34083838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 45183477 - 45183428
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| |||||||||||||||||| |||||| ||||||||||||||    
T  45183477 taaacgagatacaaattaattataaattttttaagaaattcataattatg 45183428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 38415479 - 38415534
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatggaaaat 74  Q
    ||||| |||||||||||||||||||||| |||||  ||||||| ||||||||||||    
T  38415479 taaactagagacaaattaattataaattatttaacaaattcatgattatggaaaat 38415534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 64
Target Start/End: Original strand, 29564830 - 29564868
Alignment:
Q  26 gagacaaattaattataaattgtttaagtaattcataat 64  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  29564830 gagacaaattaattataaattgtttaagaaattcataat 29564868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 8257324 - 8257275
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||| ||| ||||||||||||||||| ||||| ||||||||||||||    
T  8257324 taaacgaaagaaaaattaattataaattgcttaagaaattcataattatg 8257275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 68
Target Start/End: Complemental strand, 27935663 - 27935624
Alignment:
Q  29 acaaattaattataaattgtttaagtaattcataattatg 68  Q
    |||||||||||| |||||||||||| ||||||||||||||    
T  27935663 acaaattaattacaaattgtttaagaaattcataattatg 27935624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 32 - 74
Target Start/End: Complemental strand, 40368715 - 40368673
Alignment:
Q  32 aattaattataaattgtttaagtaattcataattatggaaaat 74  Q
    ||||| |||| ||||||||||| ||||||||||||||||||||    
T  40368715 aattatttatgaattgtttaagaaattcataattatggaaaat 40368673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 33041448 - 33041400
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    |||| |||| |||||||||||||||||||||| || ||||||||||||||    
T  33041448 taaatgagatacaaattaattataaattgttt-agaaattcataattatg 33041400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 27912500 - 27912456
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataa 63  Q
    |||||||| |||||||||||||| ||||||||| | |||||||||    
T  27912500 taaacgagggacaaattaattatgaattgtttatgaaattcataa 27912456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 53403 - 53354
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  53403 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 53354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 480126 - 480175
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  480126 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 480175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 378920 - 378871
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  378920 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 378871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 2728864 - 2728913
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  2728864 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 2728913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 4404504 - 4404455
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  4404504 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 4404455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 15838783 - 15838734
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  15838783 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 15838734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 16787696 - 16787745
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  16787696 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 16787745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 29728051 - 29728100
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  29728051 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 29728100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 34136472 - 34136521
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  34136472 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 34136521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 39915012 - 39914963
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  39915012 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 39914963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 42231433 - 42231384
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  42231433 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 42231384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 3648463 - 3648512
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| | ||||||||||||||||||||||| ||||||||||||||    
T  3648463 taaacgagataaaaattaattataaattgtttaagaaattcataattatg 3648512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 9175630 - 9175581
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||||||||||||||||||| || |||||| ||||||||||||||    
T  9175630 taaacgagagacaaattaattataagttatttaagaaattcataattatg 9175581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 9877716 - 9877667
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||| ||||||||||| ||||||||||||||    
T  9877716 taaacgagatacaaattaattatgaattgtttaagaaattcataattatg 9877667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 40470212 - 40470261
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    |||| |||| ||||||||||||||||||||||||| ||||||||||||||    
T  40470212 taaatgagatacaaattaattataaattgtttaagaaattcataattatg 40470261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 19083 - 19034
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||| || |||||||||||||| ||||||||||| ||||||||||||||    
T  19083 taaaccagggacaaattaattattaattgtttaagaaattcataattatg 19034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 23402604 - 23402555
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||| ||| ||||||||||||||| ||||||||| ||||||||||||||    
T  23402604 taaacaagatacaaattaattataagttgtttaagaaattcataattatg 23402555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 58
Target Start/End: Complemental strand, 7278519 - 7278480
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaatt 58  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  7278519 taaacgagatacaaattaattataaattgtttaagaaatt 7278480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 32540135 - 32540185
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatgg 69  Q
    |||| ||||||| ||||||||||||||| |||||| |||| ||||||||||    
T  32540135 taaatgagagacgaattaattataaattttttaagaaatttataattatgg 32540185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 40401179 - 40401224
Alignment:
Q  21 aacgagagacaaattaattataaattgtttaagtaattcataatta 66  Q
    |||||||||| ||||||||||||||| ||| || ||||||||||||    
T  40401179 aacgagagacgaattaattataaattattttagaaattcataatta 40401224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 68
Target Start/End: Original strand, 3672291 - 3672327
Alignment:
Q  32 aattaattataaattgtttaagtaattcataattatg 68  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  3672291 aattaattatgaattgtttaaggaattcataattatg 3672327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 399115 - 399066
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  399115 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 399066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 18339590 - 18339541
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  18339590 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 18339541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 28997226 - 28997177
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  28997226 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 28997177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 34948452 - 34948499
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataatta 66  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  34948452 taaacgagatacaaattaattataaattgtttaagaaattcataatta 34948499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 33229006 - 33229056
Alignment:
Q  19 taaacgagagacaaattaattataaatt-gtttaagtaattcataattatg 68  Q
    ||||||||| |||||||||||||||||| ||||||| ||||||||||||||    
T  33229006 taaacgagatacaaattaattataaattagtttaagaaattcataattatg 33229056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 13838294 - 13838245
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||| | ||||||||||||||||||||||||  ||||||||||||||    
T  13838294 taaacgatatacaaattaattataaattgtttaataaattcataattatg 13838245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 10231797 - 10231747
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatgg 69  Q
    |||| |||| || |||||||||| ||||||||||| |||||||||||||||    
T  10231797 taaatgagatacgaattaattattaattgtttaagaaattcataattatgg 10231747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 69
Target Start/End: Original strand, 12850063 - 12850101
Alignment:
Q  31 aaattaattataaattgtttaagtaattcataattatgg 69  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  12850063 aaattaattatgaattgtttaagaaattcataattatgg 12850101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 29743781 - 29743731
Alignment:
Q  19 taaacgagagacaaattaattataaatt-gtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||| || ||||||| ||||||||||||||    
T  29743781 taaacgagatacaaattaattataagttagtttaagaaattcataattatg 29743731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 4335203 - 4335248
Alignment:
Q  29 acaaattaattataaattgtttaagtaattcataattatggaaaat 74  Q
    ||||||||||||| ||||||||||| ||||||||||| | ||||||    
T  4335203 acaaattaattatgaattgtttaagaaattcataattgttgaaaat 4335248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 12098477 - 12098436
Alignment:
Q  28 gacaaattaattataaattgtttaagtaattcataattatgg 69  Q
    |||||||||||||| |||| |||||| |||||||||||||||    
T  12098477 gacaaattaattatgaattatttaagaaattcataattatgg 12098436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 29341528 - 29341488
Alignment:
Q  26 gagacaaattaattataaattgtttaagtaattcataatta 66  Q
    |||||||||||||||| ||||||||||  ||||||||||||    
T  29341528 gagacaaattaattatgaattgtttaaaaaattcataatta 29341488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 3292567 - 3292616
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  3292567 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 3292616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 6236006 - 6235957
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  6236006 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 6235957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 17510902 - 17510951
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  17510902 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 17510951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 20129811 - 20129762
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  20129811 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 20129762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 25931206 - 25931157
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  25931206 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 25931157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 26438948 - 26438997
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  26438948 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 26438997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 34406953 - 34407002
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  34406953 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 34407002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 36382016 - 36382065
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  36382016 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 36382065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 43143255 - 43143304
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  43143255 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 43143304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 43356402 - 43356353
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  43356402 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 43356353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 47501271 - 47501222
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  47501271 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 47501222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 13394912 - 13394959
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataatta 66  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  13394912 taaacgagatacaaattaattataaattgtttaagaaattcataatta 13394959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 6689906 - 6689955
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    |||||||||  |||||||||||||||||||||||| ||||||||||||||    
T  6689906 taaacgagattcaaattaattataaattgtttaagaaattcataattatg 6689955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 13012686 - 13012637
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| |||||||||||||||||| |||||| ||||||||||||||    
T  13012686 taaacgagatacaaattaattataaattatttaagaaattcataattatg 13012637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 28876985 - 28877034
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| | ||||||||||||||||||||||| ||||||||||||||    
T  28876985 taaacgagatagaaattaattataaattgtttaagaaattcataattatg 28877034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 35546449 - 35546400
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| |||||||||||||||||| |||||| ||||||||||||||    
T  35546449 taaacgagatacaaattaattataaattatttaagaaattcataattatg 35546400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 40529513 - 40529464
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||| ||| ||||||||||||||||||||||||| ||||||||||||||    
T  40529513 taaacaagatacaaattaattataaattgtttaagaaattcataattatg 40529464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 48130474 - 48130425
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||| | ||||||||||||||||||||||||| ||||||||||||||    
T  48130474 taaacgacatacaaattaattataaattgtttaagaaattcataattatg 48130425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 48989825 - 48989776
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| |||||||||| |||||||||||||| ||||||||||||||    
T  48989825 taaacgagatacaaattaatcataaattgtttaagaaattcataattatg 48989776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 50204748 - 50204797
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| | ||||||||||||||||||||||| ||||||||||||||    
T  50204748 taaacgagatataaattaattataaattgtttaagaaattcataattatg 50204797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 29 - 68
Target Start/End: Complemental strand, 26448538 - 26448499
Alignment:
Q  29 acaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  26448538 acaaattaattataaattgtttaagaaattcataattatg 26448499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 33136115 - 33136162
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataatta 66  Q
    ||||| ||| ||||||||||||||||||||||||| ||||||||||||    
T  33136115 taaacaagatacaaattaattataaattgtttaagaaattcataatta 33136162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 9415395 - 9415345
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatgg 69  Q
    ||||||||| ||||||| ||||| ||||||||||| |||||||||||||||    
T  9415395 taaacgagatacaaatttattatgaattgtttaagaaattcataattatgg 9415345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 29094644 - 29094594
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatgg 69  Q
    ||||||||| || |||||||||| ||||||||||| |||||||||||||||    
T  29094644 taaacgagatacgaattaattatgaattgtttaagaaattcataattatgg 29094594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 42333445 - 42333495
Alignment:
Q  19 taaacgagagacaaattaattataaattg-tttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||| |||||| ||||||||||||||    
T  42333445 taaacgagatacaaattaattataaattgttttaagaaattcataattatg 42333495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 10352554 - 10352604
Alignment:
Q  19 taaacgagagacaaattaattataaatt-gtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||| || ||||||| ||||||||||||||    
T  10352554 taaacgagatacaaattaattataagttagtttaagaaattcataattatg 10352604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 29995653 - 29995703
Alignment:
Q  19 taaacgagagacaaattaattataaatt-gtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||| || ||||||| ||||||||||||||    
T  29995653 taaacgagatacaaattaattataagttagtttaagaaattcataattatg 29995703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 30077306 - 30077356
Alignment:
Q  19 taaacgagagacaaattaattataaatt-gtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||| || ||||||| ||||||||||||||    
T  30077306 taaacgagatacaaattaattataagttagtttaagaaattcataattatg 30077356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 1818213 - 1818164
Alignment:
Q  20 aaacgagagacaaattaattataaatt-gtttaagtaattcataattatg 68  Q
    |||||||| ||||||||||||||| || ||||||| ||||||||||||||    
T  1818213 aaacgagatacaaattaattataagttagtttaagaaattcataattatg 1818164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 31853713 - 31853673
Alignment:
Q  29 acaaattaattataaattgtttaagtaattcataattatgg 69  Q
    ||||||||||||| ||||||||||| |||||||| ||||||    
T  31853713 acaaattaattatgaattgtttaagaaattcatacttatgg 31853673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 6403473 - 6403522
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  6403473 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 6403522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 12756508 - 12756557
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  12756508 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 12756557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 17444710 - 17444759
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  17444710 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 17444759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 31581290 - 31581339
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  31581290 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 31581339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 41251303 - 41251352
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  41251303 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 41251352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 45419079 - 45419030
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  45419079 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 45419030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 7072205 - 7072252
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataatta 66  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  7072205 taaacgagatacaaattaattataaattgtttaagaaattcataatta 7072252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 32126858 - 32126905
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataatta 66  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  32126858 taaacgagatacaaattaattataaattgtttaagaaattcataatta 32126905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 2286286 - 2286237
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| |||| |||||||||||||||||||| ||||||||||||||    
T  2286286 taaacgagatacaacttaattataaattgtttaagaaattcataattatg 2286237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 2957815 - 2957864
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  2957815 taaacgagatacaaattaattataaattgtttaagaaattcataaatatg 2957864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 18982087 - 18982038
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| | ||||||||||||||||||||||| ||||||||||||||    
T  18982087 taaacgagataaaaattaattataaattgtttaagaaattcataattatg 18982038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 21556592 - 21556543
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||| ||||||||||| ||||||||||||||    
T  21556592 taaacgagatacaaattaattatgaattgtttaagaaattcataattatg 21556543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 35963188 - 35963139
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||  ||||||||||||||    
T  35963188 taaacgagatacaaattaattataaattgtttaataaattcataattatg 35963139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 44084272 - 44084321
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| |||||||||||||||||| |||||| ||||||||||||||    
T  44084272 taaacgagatacaaattaattataaattatttaagaaattcataattatg 44084321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 4554863 - 4554910
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataatta 66  Q
    ||||||||| ||||||||||||||||||||||||| ||||| ||||||    
T  4554863 taaacgagatacaaattaattataaattgtttaagaaattcttaatta 4554910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 68
Target Start/End: Original strand, 8059014 - 8059052
Alignment:
Q  30 caaattaattataaattgtttaagtaattcataattatg 68  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  8059014 caaattaattataaattgtttaagaaattcataattatg 8059052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 816728 - 816777
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    |||| |||||||||||||||||| ||||||||||  ||||||||||||||    
T  816728 taaaggagagacaaattaattatgaattgtttaaaaaattcataattatg 816777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 15441855 - 15441904
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    |||| |||| ||||||||||||| ||||||||||| ||||||||||||||    
T  15441855 taaatgagacacaaattaattatgaattgtttaagaaattcataattatg 15441904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 26162373 - 26162422
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| |||||||| |||||||||||||||  ||||||||||||||    
T  26162373 taaacgagatacaaattagttataaattgtttaaaaaattcataattatg 26162422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 26591539 - 26591496
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcata 62  Q
    ||||||||| ||||||||||||| ||||||||||| ||||||||    
T  26591539 taaacgagatacaaattaattatgaattgtttaagaaattcata 26591496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 37621732 - 37621782
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatgg 69  Q
    ||||||||| || |||||||||| |||| |||||| |||||||||||||||    
T  37621732 taaacgagatacgaattaattatgaattatttaagaaattcataattatgg 37621782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 3843993 - 3844034
Alignment:
Q  28 gacaaattaattataaattgtttaagtaattcataattatgg 69  Q
    |||||||||||| | |||||||||| ||||||||||||||||    
T  3843993 gacaaattaattgtgaattgtttaaataattcataattatgg 3844034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 68
Target Start/End: Complemental strand, 8147832 - 8147799
Alignment:
Q  35 taattataaattgtttaagtaattcataattatg 68  Q
    ||||||||||||||||||| ||||||||||||||    
T  8147832 taattataaattgtttaagaaattcataattatg 8147799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 42442482 - 42442433
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| | ||||||| ||||||||||||||| ||||||||| ||||    
T  42442482 taaacgagatataaattaactataaattgtttaagaaattcataaatatg 42442433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 3829479 - 3829430
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  3829479 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 3829430  T

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Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 17445790 - 17445741
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  17445790 taaacgagatacaaattaattataaattgtttaagaaattcataattatg 17445741  T

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Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 32981728 - 32981775
Alignment:
Q  21 aacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  32981728 aacgagatacaaattaattataaattgtttaagaaattcataattatg 32981775  T

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Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 35908024 - 35907977
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataatta 66  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  35908024 taaacgagatacaaattaattataaattgtttaagaaattcataatta 35907977  T

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Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 7433918 - 7433869
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||||||||||    
T  7433918 taaacgagatacaaattaattataaattgttaaagaaattcataattatg 7433869  T

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Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 11958020 - 11958069
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| |||||||||||||||||| |||||| ||||||||||||||    
T  11958020 taaacgagatacaaattaattataaattatttaagaaattcataattatg 11958069  T

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Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 33490202 - 33490153
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||| || |||||||||||||||||||||| ||||||||||||||    
T  33490202 taaacgagatacgaattaattataaattgtttaagaaattcataattatg 33490153  T

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Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 42310610 - 42310659
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||| ||| ||||||||||||||||||||||||| ||||||||||||||    
T  42310610 taaactagatacaaattaattataaattgtttaagaaattcataattatg 42310659  T

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Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 23313491 - 23313443
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattat 67  Q
    ||||||||| ||||||||||||||||||||||||  |||||||||||||    
T  23313491 taaacgagatacaaattaattataaattgtttaataaattcataattat 23313443  T

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Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 28463444 - 28463396
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattat 67  Q
    ||||||| | ||||||||||||||||||||||||| |||||||||||||    
T  28463444 taaacgaaatacaaattaattataaattgtttaagaaattcataattat 28463396  T

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Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 41971940 - 41971977
Alignment:
Q  31 aaattaattataaattgtttaagtaattcataattatg 68  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  41971940 aaattaattataaattgtttaagaaattcataattatg 41971977  T

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Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 9901670 - 9901712
Alignment:
Q  27 agacaaattaattataaattgtttaagtaattcataattatgg 69  Q
    ||||||||||||||| |||| |||||| |||||||||||||||    
T  9901670 agacaaattaattatgaattatttaagaaattcataattatgg 9901712  T

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Target: scaffold0495 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 8517 - 8467
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataattatgg 69  Q
    |||| |||| || |||||||||| ||||||||||| |||||||||||||||    
T  8517 taaatgagatacgaattaattattaattgtttaagaaattcataattatgg 8467  T

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Target: scaffold0134 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 17799 - 17754
Alignment:
Q  24 gagagacaaattaattataaattgtttaagtaattcataattatgg 69  Q
    ||||||||||||| |||||||||||| ||| |||||||| ||||||    
T  17799 gagagacaaattacttataaattgttaaagaaattcatacttatgg 17754  T

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Target: scaffold0069 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 18056 - 18012
Alignment:
Q  19 taaacgagagacaaattaattataaattgtttaagtaattcataa 63  Q
    ||||||| | |||||||||||||||||||||||||  ||||||||    
T  18056 taaacgatatacaaattaattataaattgtttaagacattcataa 18012  T

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Target: scaffold0015 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 68
Target Start/End: Original strand, 2139 - 2175
Alignment:
Q  32 aattaattataaattgtttaagtaattcataattatg 68  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  2139 aattaattatgaattgtttaagaaattcataattatg 2175  T

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