View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17406_low_13 (Length: 238)
Name: NF17406_low_13
Description: NF17406
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17406_low_13 |
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Alignment Details
Target: chr1 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 6454473 - 6454693
Alignment:
| Q |
1 |
tctgattcagctagtagtggaagtgagttaagccatgaaaatccatttatctatcctcatcaacgtgacccaacattgagattaggctttggaaattcag |
100 |
Q |
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| T |
6454473 |
tctgattcagctagtagtggaagtgaattaagccatgaaaatccatttatctatcctcatcaacgtgacccaacattgagattaggctttggaaattcag |
6454572 |
T |
|
| Q |
101 |
atttgatgaatccacatcatcataatcatcaccttcatcgtcatcaagttcaaggtgtttcaagaaactttaaccaacacttccaacctcacatctatgg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6454573 |
atttgatgaatccacatcatcataatcatcaccttcatcgtcatcaagttcaaggggtttcaagaaactttaaccaacacttccaacctcacatctatgg |
6454672 |
T |
|
| Q |
201 |
ccgcgatttcaagcgaaatac |
221 |
Q |
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||||||||||||||||||||| |
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| T |
6454673 |
ccgcgatttcaagcgaaatac |
6454693 |
T |
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