View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17407_low_26 (Length: 241)
Name: NF17407_low_26
Description: NF17407
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17407_low_26 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 17 - 241
Target Start/End: Complemental strand, 30010672 - 30010448
Alignment:
| Q |
17 |
agaacaaagggagccatctctgaatgaacatgaacgcaggctcaaagaagttcatcactgctgtagctgcagatggcacggtagagtcaagaataatcaa |
116 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |
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| T |
30010672 |
agaacaaagggagccatctctgaatgaacatgaacgcaggctcaaagaagttcatcactgatgtagctgcagatggcacggtagaatcaagaataatcaa |
30010573 |
T |
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| Q |
117 |
aactgaaaatatacaaaacatcccaaacaatgcactaggaaatttgatagcagctgctacaaatgctttcttcaaaaacttatccgtagcaagaaaaagc |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30010572 |
aactgaaaatatacaaaacatcccaaacaatgcactaggaaatttgatagcagctgctacaaatgctttcttcaaaaacttatccgtagcaagaaaaagc |
30010473 |
T |
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| Q |
217 |
cccagagacacaatcaaatgtaaca |
241 |
Q |
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||||||||||||||||||||||||| |
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| T |
30010472 |
cccagagacacaatcaaatgtaaca |
30010448 |
T |
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