View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17408_high_58 (Length: 252)
Name: NF17408_high_58
Description: NF17408
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17408_high_58 |
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Alignment Details
Target: chr7 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 3615859 - 3615650
Alignment:
| Q |
1 |
ggcaagaaaataaaaacaacagatgatcctacaaaagcaaaagccaatataccagaaagcaagcgacaaaggcgcaaaaacagagataaaaaccaacgac |
100 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
3615859 |
ggcaaggaaataaaaacaacagatgatcctacaaaagcaaaagccaatataccagaaagcaagtgacaaaggcgcaaaaacagagataaaaaccaacgac |
3615760 |
T |
|
| Q |
101 |
tgttggttttgccgggcatgacagcggaagctgcaaacaccagcattaacagccgagaaaactgcccaaaatataccccagctgctgtctaaaaatcccc |
200 |
Q |
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|| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3615759 |
tgctggttttgccgggcatgacagcggaagctgcacacaccagcattaacagccgagaaaactgcccaaaatataccccagctgctgtctaaaaatcccc |
3615660 |
T |
|
| Q |
201 |
tatacaagga |
210 |
Q |
| |
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|||||||||| |
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| T |
3615659 |
tatacaagga |
3615650 |
T |
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