View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17408_high_65 (Length: 244)
Name: NF17408_high_65
Description: NF17408
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17408_high_65 |
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Alignment Details
Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 7894308 - 7894535
Alignment:
| Q |
1 |
cgaccaaatcgcatcctcggcgttcgcagcaactcaatcagaatcactccgtactccatttctcactctcaggtacttcatttctccattctttg-agtg |
99 |
Q |
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| T |
7894308 |
cgaccaaatcgccacctcggcgttcgcagcaactcagtcagaatcactccttactccatttctcactctcaggtacttcatttctccattcttttcagtg |
7894407 |
T |
|
| Q |
100 |
ttgttgtttttcgttttgatcaaaatgagtgattgaattgattcatgaaaatgcagatgcttgaaagagaagcgttgcgaagaagcaatgttgatgatat |
199 |
Q |
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|| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
7894408 |
tttttgtttttggttttgatcaaaatgagtgattgaattgattcatgaaaatgcagatgcttgaaagagaagcgttgcgaagaagcaatgttgatgatgt |
7894507 |
T |
|
| Q |
200 |
tcctcaagaaatggttctggatcaacct |
227 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
7894508 |
tcctcaagaaatggttctggatcaacct |
7894535 |
T |
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