View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17408_low_16 (Length: 522)
Name: NF17408_low_16
Description: NF17408
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17408_low_16 |
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Alignment Details
Target: chr4 (Bit Score: 464; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 464; E-Value: 0
Query Start/End: Original strand, 16 - 503
Target Start/End: Original strand, 32672685 - 32673172
Alignment:
| Q |
16 |
atgaaccaaccaataaggaagaattacgattaccttcgagaagggaaaatctgttgttgtctcctcaacatcacacaaaatcaccctccagcaagaaggc |
115 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
32672685 |
atgaaccaaccaataaggaagaattacgattaccttcgagaagggaaaatctgttgttgtctcctcaatatcacacaaaatcaccctccagcaagaaggc |
32672784 |
T |
|
| Q |
116 |
ggtacaaaactccacagttgtaaaatccaatgagactcaatcagcaaccaaacctttgatcaaagaactaagtttgccacacaactatgagcacatattg |
215 |
Q |
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|||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
32672785 |
ggtacaaaactccacagttgtaaaatgcgatgagactcaatcagcaaccaaacctttgatcaaagaactaagtttgtcacacaactatgagcacatattg |
32672884 |
T |
|
| Q |
216 |
aaggatgcagattcaccggttgataaatcttcaagggaaaagatgtgtgatcagctatatgctggagtgttcttacatcataagactaaggcaagttcaa |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32672885 |
aaggatgcagattcaccggttgataaatcttcaagggaaaagatgtgtgatcagctatatgctggagtgttcttacatcataagactaaggcaagttcaa |
32672984 |
T |
|
| Q |
316 |
tatcattcagtttcttatgaacgagcaattgaatttagttatttgcaagtttaagctaattctaattgaagatttgtttttatatattgaacaaatttta |
415 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
32672985 |
tatcattcagtttcttatgaacgagcaattgaatttagttatttgcaagtttaagctaattctaattgaagatttttttttatatattgaacaaatttta |
32673084 |
T |
|
| Q |
416 |
atgattatcgttgtttgtagaaatattgggtagagaagaactccaaagccaactgtttcatgttgtatgcaagagcactctcaatcac |
503 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32673085 |
atgattatcgttgtttttagaaatattgggtagagaagaactccaaagccaactgtttcatgttgtatgcaagagcactctcaatcac |
32673172 |
T |
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