View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17408_low_50 (Length: 309)
Name: NF17408_low_50
Description: NF17408
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17408_low_50 |
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Alignment Details
Target: chr8 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 35060290 - 35059998
Alignment:
| Q |
1 |
ggttattgatatggttactataaccatgaaagtagtaatagagaatatcaaacactgtggcgggttcaatccagagtttagctgagcggaggttgaaacc |
100 |
Q |
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| T |
35060290 |
ggttattgatatggttactataaccatgaaagtagtaatagagaatatcaaacactgtggcgggttcaatccagagtttagctgagcggaggttgaaacc |
35060191 |
T |
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| Q |
101 |
acgagcaactcgtggagcccaaggaatgattatggtgtagagtaagcaagtgaaaggtttggattcttgtttggcagagagtatgagattggtgatgaag |
200 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35060190 |
acgagctactcgtggagcccaaggaatgattatggtgtagagtaagcaagtgaaaggtttggattcttgtttggcagagagtatgagattggtgatgaag |
35060091 |
T |
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| Q |
201 |
tcggagccacgggtgttgaactgtgaggtgtattggtggaaatcagcgtcggtgtttgtgatggcgatgaaaccgtcgtcgtagccatcggag |
293 |
Q |
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||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
35060090 |
tcggagccacgggtgttgaactgtgaggtgtattgatggaaatcagcgtcggtgtttgtgatggcgatgaaaccgtcgttgtagccatcggag |
35059998 |
T |
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